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Cyril Pommier

Plant research data engineer.
9
Documents
Identifiants chercheurs

Présentation

Cyril Pommier is a bio-informatician with a multidisciplinary background in molecular biology and computer science. He worked four years on genomic databases and has been working since 2007 on plant data management in global data federations with a focus on crops phenomic. He builds bridges between plant experimentation in the field, molecular biology and computer science from information system development to data management frameworks. He is now in charge of data and federation in the URGI PlantBioinfoPF, an INRAE bioinformatic platform part of ELIXIR-fr. Cyril Pommier is also co leader of the Plant community of ELIXIR (https://elixir-europe.org/communities/plant-sciences), the European Infrastructure for life science and co leader the Information System of Phenom-EMPHASIS, the national infrastructure for plant phenotyping. He is leading the building of data repositories (https://doi.org/10.34133/2019/1671403), data portals (https://urgi.versailles.inrae.fr/faidare/) and co leads international plant data standards (MIAPPE https://www.miappe.org , BrAPI https://www.brapi.org).
Cyril Pommier is a bio-informatician with a multidisciplinary background in molecular biology and computer science. He worked four years on genomic databases and has been working since 2007 on plant data management in global data federations with a focus on crops phenomic. He builds bridges between plant experimentation in the field, molecular biology and computer science from information system development to data management frameworks. He is now in charge of data and federation in the URGI PlantBioinfoPF, an INRAE bioinformatic platform part of ELIXIR-fr. Cyril Pommier is also co leader of the Plant community of ELIXIR (https://elixir-europe.org/communities/plant-sciences), the European Infrastructure for life science and co leader the Information System of Phenom-EMPHASIS, the national infrastructure for plant phenotyping. He is leading the building of data repositories (https://doi.org/10.34133/2019/1671403), data portals (https://urgi.versailles.inrae.fr/faidare/) and co leads international plant data standards (MIAPPE https://www.miappe.org , BrAPI https://www.brapi.org).

Publications

jacques-le-gouis

Ontology mapping for wheat trait information management

Claire Nédellec , Sophie Aubin , Clara Sauvion , Sonia Bravo , Jacques Le Gouis
Séminaire résidentiel INRAE Semantic Linked Data, 2023
Autre publication scientifique hal-04420465v1

PHENOME: French Plant Phenomic Center

Francois Tardieu , Jacques Le Gouis , Pamela Lucas , Frédéric Baret , Pascal Neveu
EPPN Plant Phenotyping Symposium, Nov 2015, Barcelona, Spain. 2015
Poster de conférence hal-01229565v1

PHENOME: French Plant Phenomic Center

Jacques Le Gouis , Pamela Lucas , Frédéric Baret , Pascal Neveu , Cyril Pommier
9th International Wheat Conference, Sep 2015, Sydney, Australia. 2015
Poster de conférence hal-02800017v1
Image document

BreedWheat genotyping and phenotyping data in GnpIS information system

Marie Laine , Thomas Letellier , Raphaël-Gauthier R.-G. Flores , Loïc Couderc , Nacer Mohellibi
JOBIM 2015 - Journées Ouvertes Biologie Informatique Mathématiques, Jul 2015, Clermont-Ferrand, France. 2015
Poster de conférence hal-02801654v1
Image document

PHENOME: French Plant Phenomic Center

Francois F. Tardieu , Jacques Le Gouis , Pamela Lucas , Frédéric Baret , Pascal Neveu
Recent progress in drought tolerance from genetics to modelling, Jun 2015, Montpellier, France. 2015
Poster de conférence hal-02744329v1

Wheat Crop Ontology: A Species Specific Trait Ontology. Use Case: The URGI Information System

Cyril Pommier , Michael M. Alaux , Erik Kimmel , Delphine Steinbach , Elizabeth Arnaud
Plant and Animal Genome, Jan 2013, San Diego, United States. 2013
Poster de conférence hal-02810186v1