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Rhizophere analysis of auxin producers harboring the phenylpyruvate decarboxylase pathway
Cécile Gruet
,
Andréa Oudot
,
Danis Abrouk
,
Yvan Moënne-Loccoz
,
Daniel Muller
Journal articles
hal-03533870v1
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Effect of Inoculation Level on the Impact of the PGPR Azospirillum lipoferum CRT1 on Selected Microbial Functional Groups in the Rhizosphere of Field Maize
Sébastien Renoud
,
Danis Abrouk
,
Claire Prigent Combaret
,
Florence Wisniewski-Dyé
,
Laurent Legendre
Journal articles
hal-03579580v1
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Significance of the Diversification of Wheat Species for the Assembly and Functioning of the Root-Associated Microbiome
Cécile Gruet
,
Daniel Muller
,
Yvan Moënne-Loccoz
Journal articles
hal-03514878v1
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Field Site-Specific Effects of an Azospirillum Seed Inoculant on Key Microbial Functional Groups in the Rhizosphere
Sébastien Renoud
,
Jordan Vacheron
,
Danis Abrouk
,
Claire Prigent Combaret
,
Laurent Legendre
Journal articles
hal-03763575v1
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Experimental Evolution in Plant-Microbe Systems: A Tool for Deciphering the Functioning and Evolution of Plant-Associated Microbial Communities
Beatriz Manriquez
,
Daniel Muller
,
Claire Prigent-Combaret
,
Claire Prigent Combaret
Journal articles
hal-03300724v1
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Vaginal Tampon Colonization by Staphylococcus aureus in Healthy Women
Myriam Chiaruzzi
,
Alexia Barbry
,
Anaëlle Muggeo
,
Anne Tristan
,
Isaline Jacquemond
Journal articles
hal-02989503v2
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Secondary metabolites from plant‐associated Pseudomonas are overproduced in biofilm
Laura Rieusset
,
Marjolaine Rey
,
Daniel Muller
,
Jordan Vacheron
,
Florence Gerin
Journal articles
hal-03000801v1
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Co-occurrence of rhizobacteria with nitrogen fixation and/or 1-aminocyclopropane-1-carboxylate deamination abilities in the maize rhizosphere
Sébastien Renoud
,
Marie-Lara Bouffaud
,
Audrey Dubost
,
Claire Prigent-Combaret
,
Laurent Legendre
Journal articles
hal-02547931v1
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Genomic, phylogenetic and catabolic re-assessment of the Pseudomonas putida clade supports the delineation of Pseudomonas alloputida sp. nov., Pseudomonas inefficax sp. nov., Pseudomonas persica sp. nov., and Pseudomonas shirazica sp. nov
Vahid Keshavarz-Tohid
,
Jordan Vacheron
,
Audrey Dubost
,
Claire Prigent-Combaret
,
Parissa Taheri
Journal articles
hal-02392254v1
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Impact of currently marketed tampons and menstrual cups on Staphylococcus aureus growth and TSST-1 production in vitro
Louis Nonfoux
,
Myriam Chiaruzzi
,
Cédric Badiou
,
Jessica Baude
,
Anne Tristan
Journal articles
hal-01911407v1
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Complex ecological interactions of Staphylococcus aureus in tampons during menstruation
Isaline Jacquemond
,
Anaëlle Muggeo
,
Gery Lamblin
,
Anne Tristan
,
Yves Gillet
Journal articles
hal-01910908v1
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1-Aminocyclopropane-1-carboxylate deaminase producers associated to maize and other Poaceae species
Marie-Lara Bouffaud
,
Sébastien Renoud
,
Audrey Dubost
,
Yvan Moënne-Loccoz
,
Daniel Muller
Journal articles
hal-02148378v1
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Draft genome sequence of plant growth-promoting bacillus altitudinis strain pae4
Nahed Abdel Ghaffar Abdel Aziz Ibrahim
,
Mohamed Nabil Abdel Mageed Omar
,
Ghada A. Abu El Heba
,
Yvan Moenne-Loccoz
,
Claire Prigent Combaret
Journal articles
hal-02159605v1
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Draft Genome Sequence of Chryseobacterium sp. JV274 Isolated from Maize Rhizosphere
Jordan Vacheron
,
Audrey Dubost
,
David Chapulliot
,
Claire Prigent-Combaret
,
Daniel Muller
Journal articles
hal-02487196v1
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Let the core microbiota be functional
Philippe P. Lemanceau
,
Manuel Blouin
,
Daniel Muller
,
Yvan Moenne-Loccoz
Journal articles
hal-01608595v1
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Distribution of 2,4-diacetylphloroglucinol biosynthetic genes among the pseudomonas spp. reveals unexpected polyphyletism
Juliana Almario
,
Maxime Bruto
,
Jordan Vacheron
,
Claire Prigent-Combaret
,
Yvan Moenne-Loccoz
Journal articles
hal-01608669v1
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Differential contribution of plant-beneficial functions from Pseudomonas kilonensis F113 to root system architecture alterations in Arabidopsis thaliana and Zea mays
Jordan Vacheron
,
Guilhem Desbrosses
,
Sébastien Renoud
,
Rosa-Maria Padilla-Aguilar
,
Vincent Walker
Journal articles
hal-01613633v1
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Phylogenetic diversity and antagonistic traits of root and rhizosphere pseudomonads of bean from Iran for controlling Rhizoctonia solani
Vahid Keshavarz-Tohid
,
Parissa Taheri
,
Daniel Muller
,
Claire Prigent-Combaret
,
Jordan Vacheron
Journal articles
hal-02487202v1
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Is plant evolutionary history impacting recruitment of diazotrophs and nifH expression in the rhizosphere?
Marie-Lara Bouffaud
,
Sebastien Renoud
,
Yvan Moënne-Loccoz
,
Daniel Muller
Journal articles
hal-02466010v1
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Fluorescent Pseudomonas Strains with only Few Plant-Beneficial Properties Are Favored in the Maize Rhizosphere
Jordan Vacheron
,
Yvan Moënne-Loccoz
,
Audrey Dubost
,
Maximilien Gonçalves-Martins
,
Daniel Muller
Journal articles
hal-02466008v1
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Expression on roots and contribution to maize phytostimulation of 1-aminocyclopropane-1-decarboxylate deaminase gene acdS in Pseudomonas fluorescens F113
Jordan Vacheron
,
Emeline Combes-Meynet
,
Vincent Walker
,
B. Gouesnard
,
Daniel Muller
Journal articles
hal-02466011v1
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Ecological speciation in bacteria: reverse ecology approaches reveal the adaptive part of bacterial cladogenesis
Florent Lassalle
,
Daniel Muller
,
Xavier Nesme
Journal articles
hal-02547960v1
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Comparative genomics of environmental and clinical stenotrophomonas maltophiliaStrains with different antibiotic resistance profiles
Benjamin Youenou
,
Sabine Favre-Bonte
,
Josselin Bodilis
,
Elisabeth Brothier
,
Audrey Dubost
Journal articles
hal-01605055v1
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Root microbiome relates to plant host evolution in maize and other Poaceae
Marie-Lara Bouffaud
,
Marie-Andrée Poirier
,
Daniel Muller
,
Yvan Moënne-Loccoz
Journal articles
hal-01010591v1
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Analysis of genes contributing to plant-beneficial functions in plant growth-promoting rhizobacteria and related Proteobacteria
Maxime Bruto
,
Claire Prigent-Combaret
,
Daniel Muller
,
Yvan Moënne-Loccoz
Journal articles
hal-02487456v1
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Rhizosphere microbial communities associated with Rhizoctonia damage at the field and disease patch scale
Suzanne Donn
,
Juliana Almario
,
Daniel Muller
,
Yvan Moënne-Loccoz
,
Vadakattu V.S.R. Gupta
Journal articles
hal-01010607v1
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Rhizosphere ecology and phytoprotection in soils naturally suppressive to Thielaviopsis black root rot of tobacco
Juliana Almario
,
Daniel Muller
,
Geneviève Défago
,
Yvan Moënne-Loccoz
Journal articles
hal-01010573v1
|
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Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers' fields
Martina Kyselková
,
Juliana Almario
,
Jan Kopecký
,
Markéta Ságová-Marečková
,
Jacqueline Haurat
Journal articles
hal-01010640v1
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Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid
Martha H. Ramírez-Bahena
,
Ludovic Vial
,
Florent Lassalle
,
Benjamin Diel
,
David Chapulliot
Journal articles
hal-01010660v1
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Frequent, independent transfers of a catabolic gene from bacteria to contrasted filamentous eukaryotes
Maxime Bruto
,
Claire Prigent-Combaret
,
P. Luis
,
Yvan Moënne-Loccoz
,
Daniel Muller
Journal articles
hal-02487460v1
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Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26.
Jérémy Andres
,
Florence Arsène-Ploetze
,
Valérie Barbe
,
Céline Brochier-Armanet
,
Jessica Cleiss-Arnold
Journal articles
hal-00972245v1
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Assessment of the relationship between geologic origin of soil, rhizobacterial community composition and soil receptivity to tobacco black root rot in Savoie region (France)
Juliana Almario
,
Martina Kyselková
,
J. Kopecký
,
M. Ságová-Marečková
,
Daniel Muller
Journal articles
hal-02522203v1
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Plant growth-promoting rhizobacteria and root system functioning
Jordan Vacheron
,
G. Desbrosses
,
Marie.-Lara Bouffaud
,
B. Touraine
,
Yvan Moënne-Loccoz
Journal articles
hal-02522224v1
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Effect of Clay Mineralogy on Iron Bioavailability and Rhizosphere Transcription of 2,4-Diacetylphloroglucinol Biosynthetic Genes in Biocontrol Pseudomonas protegens
Juliana Almario
,
Claire Prigent-Combaret
,
Daniel Muller
,
Yvan Moënne-Loccoz
Journal articles
hal-02522202v1
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Investigating the species and strain diversity of agrobacteria by MLSA: toward a phylogenetically relevant redefinition of the genus Agrobacterium.
X. Nesme
,
D. Costechareyre
,
M. H. R. Bahena
,
Daniel Muller
,
J. Nesme
Frontiers in Plant-Microbe Interaction, 2013
Journal articles
hal-02522212v1
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Unexpected phytostimulatory behavior for Escherichia coli and Agrobacterium tumefaciens model strains.
Vincent Walker
,
Maxime Bruto
,
Floriant Bellvert
,
René Bally
,
Daniel Muller
Journal articles
hal-00965830v1
|
|
Rapid and simultaneous detection of linear chromosome and large plasmids in Proteobacteria
Martha Helena Ramírez-Bahena
,
Xavier Nesme
,
Daniel Muller
Journal articles
halsde-00723073v1
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Monitoring of the relation between 2,4-diacetylphloroglucinol-producing Pseudomonas and Thielaviopsis basicola populations by real-time PCR in tobacco black root-rot suppressive and conducive soils
Juliana Almario
,
Yvan Moënne-Loccoz
,
Daniel Muller
Journal articles
hal-02532808v1
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Is diversification history of maize influencing selection of soil bacteria by roots?
Marie-Lara Bouffaud
,
Martina Kyselková
,
Brigitte Gouesnard
,
Genevieve Grundmann
,
Daniel Muller
Journal articles
halsde-00722561v1
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Unified Nomenclature for Genes Involved in Prokaryotic Aerobic Arsenite Oxidation
Marie-Claire Lett
,
Daniel Muller
,
Didier Lièvremont
,
Simon Silver
,
Joanne Santinid
Journal articles
halsde-00722718v1
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Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens
Florent Lassalle
,
Tony Campillo
,
Ludovic Vial
,
Jessica Baude
,
Denis Costechareyre
Journal articles
halsde-00723400v1
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Development of a real-time PCR method to quantify the PGPR strain Azospirillum lipoferum CRT1 on maize seedlings
Olivier Couillerot
,
Marie-Lara Bouffaud
,
Baudoin Ezékiel
,
Daniel Muller
,
Jesus Caballero-Mellado
Journal articles
hal-00874738v1
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Structure, function, and evolution of the Thiomonas spp. genome.
Florence Arsène-Ploetze
,
Sandrine Koechler
,
Marie Marchal
,
Jean-Yves Coppée
,
Michael Chandler
Journal articles
hal-00463879v1
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Arsenite Oxidase from Ralstonia sp. 22: characterization of the enzyme and its interaction with soluble cytochromes.
Aurélie Lieutaud
,
Robert van Lis
,
Simon Duval
,
Line Capowiez
,
Daniel Muller
Journal articles
hal-01602032v1
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Diversity surveys and evolutionary relationships of aoxB genes in aerobic arsenite-oxidizing bacteria.
Marianne Quéméneur
,
Audrey Heinrich-Salmeron
,
Daniel Muller
,
Didier Lièvremont
,
Michel Jauzein
Journal articles
hal-00370780v1
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Arsenite oxidation by a chemoautotrophic moderately acidophilic Thiomonas sp.: from the strain isolation to the gene study.
M.-C. Lett
,
Aurélie Lieutaud
,
Daniel Muller
,
J. Ratouchniak
,
V. Bonnefoy
Journal articles
hal-00281294v1
|
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A tale of two oxidation states: bacterial colonization of arsenic-rich environments.
Daniel Muller
,
Claudine Médigue
,
Sandrine Koechler
,
Valérie Barbe
,
mohamed Barakat
Journal articles
hal-00340034v1
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Identification of genes and proteins involved in the pleiotropic response to arsenic stress in Caenibacter arsenoxydans, a metalloresistant beta-proteobacterium with an unsequenced genome.
Christine Carapito
,
Daniel Muller
,
Evelyne Turlin
,
Sandrine Koechler
,
Antoine Danchin
Journal articles
hal-00370783v1
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Herminiimonas arsenicoxydans sp. nov., a metalloresistant bacterium.
Daniel Muller
,
Diliana D Simeonova
,
Philippe Riegel
,
Sophie Mangenot
,
Sandrine Koechler
International Journal of Systematic and Evolutionary Microbiology, 2006, 56 (Pt 8), pp.1765-9. ⟨10.1099/ijs.0.64308-0⟩
Journal articles
hal-00113703v1
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Chemiluminescence of enterococci isolates from freshwater.
Philippe Andre
,
Catherine Metzger
,
Sophie Petey
,
Dominique J-M Vidon
,
Daniel Muller
Journal articles
hal-00106769v1
|
|
Arsenite oxidase, an ancient bioenergetic enzyme.
Evelyne Lebrun
,
Myriam Brugna
,
Frauke Baymann
,
Daniel Muller
,
Didier Lièvremont
Journal articles
hal-00113712v1
|
|
Arsenite oxidase aox genes from a metal-resistant beta-proteobacterium.
Daniel Muller
,
Didier Lièvremont
,
Diliana Dancheva Simeonova
,
Jean-Claude Hubert
,
Marie-Claire Lett
Journal of Bacteriology, 2003, 185 (1), pp.135-41
Journal articles
hal-00113723v1
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