Daniel Muller

associate professor Université Claude Bernard Lyon1

Documents

Affiliations actuelles

Laboratoire d'Ecologie Microbienne - UMR 5557 (LEM)
Université Claude Bernard Lyon 1 (UCBL)
Centre National de la Recherche Scientifique (CNRS)
Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)

Identifiants chercheurs

Présentation

Publications

The capacity to suppress wheat crown rot disease occurs naturally in contrasted farm soils

Alix Catry , Simon de Donder , Richard Blanc , Michaël Denefle , Romain Bouquet et al.

Rhizosphere, 2026, 38, pp.101320. ⟨10.1016/j.rhisph.2026.101320⟩

Article dans une revue hal-05587477v1

Revival of traditional agricultural systems – A multidisciplinary on‐farm survey of maize‐bean intercropping reveals unexpected competition effects on beans

Noa Vazeux-Blumental , Laura Mathieu , Théo Trabac , Carine Palaffre , Bernard Lagardère et al.

Plants, People, Planet, 2025, pp.1-16. ⟨10.1002/ppp3.70049⟩

Article dans une revue hal-05113322v1

Genomic and biological characterization of Streptomyces strains isolated from barley

Margaux Cheminat , Loïc Waeckerle , Abdelmalek Alioua , Valérie Cognat , Mathieu Erhardt et al.

BMC Microbiology, 2025, 26 (1), pp.25. ⟨10.1186/s12866-025-04493-4⟩

Article dans une revue hal-05493195v1

Manure amendments and fungistasis, and relation with protection of wheat from Fusarium graminearum

Irena Todorović , Danis Abrouk , Nicolas Fierling , Martina Kyselková , Marie-Lara Bouffaud et al.

Applied Soil Ecology, 2024, 201, pp.105506. ⟨10.1016/j.apsoil.2024.105506⟩

Article dans une revue hal-04654296v1

Natural plant disease suppressiveness in soils extends to insect pest control

Nadine Harmsen , Pilar Vesga , Gaétan Glauser , Françoise Klötzli , Clara Heiman et al.

Microbiome, 2024, 12 (1), pp.127. ⟨10.1186/s40168-024-01841-w⟩

Article dans une revue hal-04654265v1

D genome acquisition and breeding have had a significant impact on interaction of wheat with ACC deaminase producers in soil or ACC deaminase potential activity in the rhizosphere

Cécile Gruet , Danis Abrouk , Andreas Börner , Daniel Muller , Yvan Moënne-Loccoz

Soil Biology and Biochemistry, 2024, 193, pp.109392. ⟨10.1016/j.soilbio.2024.109392⟩

Article dans une revue insu-04658828v1

Microbial diversity in soils suppressive to Fusarium diseases

Irena Todorović , Yvan Moënne-Loccoz , Vera Raic , Jelena Jovičić-Petrović , Daniel Muller

Frontiers in Plant Science, 2023, 14, pp.1228749. ⟨10.3389/fpls.2023.1228749⟩

Article dans une revue (article de synthèse) hal-04320379v1

Wheat genome architecture influences interactions with phytobeneficial microbial functional groups in the rhizosphere

Cécile Gruet , Danis Abrouk , Andreas Börner , Daniel Muller , Yvan Moënne-Loccoz

Plant, Cell and Environment, 2023, 46 (3), pp.1018-1032. ⟨10.1111/pce.14508⟩

Article dans une revue hal-04317066v1

Genomic content of wheat has a higher influence than plant domestication status on the ability to interact with Pseudomonas plant growth‐promoting rhizobacteria

Cécile Gruet , Maroua Alaoui , Florence Gerin , Claire Prigent-Combaret , Andreas Börner et al.

Plant, Cell and Environment, 2023, 46 (12), pp.3933-3948. ⟨10.1111/pce.14698⟩

Article dans une revue hal-04245524v1

A metagenomic lens into endosphere microbial communities, promises, and discoveries

Bartholomew Saanu Adeleke , Daniel Muller , Olubukola Oluranti Babalola

Letters in Applied Microbiology, 2023, 76 (2), ⟨10.1093/lambio/ovac030⟩

Article dans une revue (article de synthèse) hal-04244433v1

Two novel species isolated from wheat rhizospheres in Serbia: Pseudomonas serbica sp. nov. and Pseudomonas serboccidentalis sp. nov.

Irena Todorović , Danis Abrouk , Martina Kyselková , Céline Lavire , Marjolaine Rey et al.

Systematic and Applied Microbiology, 2023, 46 (4), pp.126425. ⟨10.1016/j.syapm.2023.126425⟩

Article dans une revue hal-04244409v1

Field Site-Specific Effects of an Azospirillum Seed Inoculant on Key Microbial Functional Groups in the Rhizosphere

Sébastien Renoud , Jordan Vacheron , Danis Abrouk , Claire Prigent Combaret , Laurent Legendre et al.

Frontiers in Microbiology, 2022, 12, pp.760512. ⟨10.3389/fmicb.2021.760512⟩

Article dans une revue hal-03763575v1

Rhizophere analysis of auxin producers harboring the phenylpyruvate decarboxylase pathway

Cécile Gruet , Andréa Oudot , Danis Abrouk , Yvan Moënne-Loccoz , Daniel Muller

Applied Soil Ecology, 2022, 173, pp.104363. ⟨10.1016/j.apsoil.2021.104363⟩

Article dans une revue hal-03533870v1

Effect of Inoculation Level on the Impact of the PGPR Azospirillum lipoferum CRT1 on Selected Microbial Functional Groups in the Rhizosphere of Field Maize

Sébastien Renoud , Danis Abrouk , Claire Prigent Combaret , Florence Wisniewski-Dyé , Laurent Legendre et al.

Microorganisms, 2022, 10 (2), pp.325. ⟨10.3390/microorganisms10020325⟩

Article dans une revue hal-03579580v1

Significance of the Diversification of Wheat Species for the Assembly and Functioning of the Root-Associated Microbiome

Cécile Gruet , Daniel Muller , Yvan Moënne-Loccoz

Frontiers in Microbiology, 2022, 12, pp.782135. ⟨10.3389/fmicb.2021.782135⟩

Article dans une revue (article de synthèse) hal-03514878v1

Experimental Evolution in Plant-Microbe Systems: A Tool for Deciphering the Functioning and Evolution of Plant-Associated Microbial Communities

Beatriz Manriquez , Daniel Muller , Claire Prigent-Combaret , Claire Prigent Combaret

Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.619122⟩

Article dans une revue (article de synthèse) hal-03300724v1

Vaginal Tampon Colonization by Staphylococcus aureus in Healthy Women

Myriam Chiaruzzi , Alexia Barbry , Anaëlle Muggeo , Anne Tristan , Isaline Jacquemond et al.

Applied and Environmental Microbiology, 2020, 86 (18), pp.e01249-20. ⟨10.1128/AEM.01249-20⟩

Article dans une revue hal-02989503v2

Secondary metabolites from plant‐associated Pseudomonas are overproduced in biofilm

Laura Rieusset , Marjolaine Rey , Daniel Muller , Jordan Vacheron , Florence Gerin et al.

Microbial Biotechnology, 2020, 13 (5), pp.1562-1580. ⟨10.1111/1751-7915.13598⟩

Article dans une revue hal-03000801v1

Author Correction: Complex ecological interactions of Staphylococcus aureus in tampons during menstruation

Isaline Jacquemond , Anaëlle Muggeo , Gery Lamblin , Anne Tristan , Yves Gillet et al.

Scientific Reports, 2020, 10 (1), pp.1848. ⟨10.1038/s41598-020-57947-2⟩

Article dans une revue hal-04814687v1

Co-occurrence of rhizobacteria with nitrogen fixation and/or 1-aminocyclopropane-1-carboxylate deamination abilities in the maize rhizosphere

Sébastien Renoud , Marie-Lara Bouffaud , Audrey Dubost , Claire Prigent-Combaret , Laurent Legendre et al.

FEMS Microbiology Ecology, 2020, 96 (5), ⟨10.1093/femsec/fiaa062⟩

Article dans une revue hal-02547931v1

Genomic, phylogenetic and catabolic re-assessment of the Pseudomonas putida clade supports the delineation of Pseudomonas alloputida sp. nov., Pseudomonas inefficax sp. nov., Pseudomonas persica sp. nov., and Pseudomonas shirazica sp. nov

Vahid Keshavarz-Tohid , Jordan Vacheron , Audrey Dubost , Claire Prigent-Combaret , Parissa Taheri et al.

Systematic and Applied Microbiology, 2019, 42 (4), pp.468-480. ⟨10.1016/j.syapm.2019.04.004⟩

Article dans une revue hal-02392254v1

Draft genome sequence of plant growth-promoting bacillus altitudinis strain pae4

Nahed Abdel Ghaffar Abdel Aziz Ibrahim , Mohamed Nabil Abdel Mageed Omar , Ghada A. Abu El Heba , Yvan Moenne-Loccoz , Claire Prigent Combaret et al.

Microbiology Resource Announcements, 2018, 7 (13), pp.1-2. ⟨10.1128/MRA.00962-18⟩

Article dans une revue hal-02159605v1

1-Aminocyclopropane-1-carboxylate deaminase producers associated to maize and other Poaceae species

Marie-Lara Bouffaud , Sébastien Renoud , Audrey Dubost , Yvan Moënne-Loccoz , Daniel Muller

Microbiome, 2018, 6 (1), ⟨10.1186/s40168-018-0503-7⟩

Article dans une revue hal-02148378v1

Impact of currently marketed tampons and menstrual cups on Staphylococcus aureus growth and TSST-1 production in vitro

Louis Nonfoux , Myriam Chiaruzzi , Cédric Badiou , Jessica Baude , Anne Tristan et al.

Applied and Environmental Microbiology, 2018, 84 (12), ⟨10.1128/AEM.00351-18⟩

Article dans une revue hal-01911407v1

Complex ecological interactions of Staphylococcus aureus in tampons during menstruation

Isaline Jacquemond , Anaëlle Muggeo , Gery Lamblin , Anne Tristan , Yves Gillet et al.

Scientific Reports, 2018, 8 (1), pp.9942. ⟨10.1038/s41598-018-28116-3⟩

Article dans une revue hal-01910908v1

Phylogenetic diversity and antagonistic traits of root and rhizosphere pseudomonads of bean from Iran for controlling Rhizoctonia solani

Vahid Keshavarz-Tohid , Parissa Taheri , Daniel Muller , Claire Prigent-Combaret , Jordan Vacheron et al.

Research in Microbiology, 2017, 168 (8), pp.760-772. ⟨10.1016/j.resmic.2017.08.002⟩

Article dans une revue hal-02487202v1

Distribution of 2,4-diacetylphloroglucinol biosynthetic genes among the pseudomonas spp. reveals unexpected polyphyletism

Juliana Almario , Maxime Bruto , Jordan Vacheron , Claire Prigent-Combaret , Yvan Moenne-Loccoz et al.

Frontiers in Microbiology, 2017, 8, ⟨10.3389/fmicb.2017.01218⟩

Article dans une revue hal-01608669v1

Differential contribution of plant-beneficial functions from Pseudomonas kilonensis F113 to root system architecture alterations in Arabidopsis thaliana and Zea mays

Jordan Vacheron , Guilhem Desbrosses , Sébastien Renoud , Rosa-Maria Padilla-Aguilar , Vincent Walker et al.

Molecular Plant-Microbe Interactions, 2017, 31 (2), ⟨10.1094/MPMI-07-17-0185-R⟩

Article dans une revue hal-01613633v1

Ancestral Genome Estimation Reveals the History of Ecological Diversification in Agrobacterium

Florent Lassalle , Rémi Planel , Simon Penel , David Chapulliot , Valérie Barbe et al.

Genome Biology and Evolution, 2017, 9 (12), pp.3413 - 3431. ⟨10.1093/gbe/evx255⟩

Article dans une revue hal-01913841v1

Let the core microbiota be functional

Philippe P. Lemanceau , Manuel Blouin , Daniel Muller , Yvan Moenne-Loccoz

Trends in Plant Science, 2017, 22 (7), pp.583-595. ⟨10.1016/j.tplants.2017.04.008⟩

Article dans une revue hal-01608595v1

Draft Genome Sequence of Chryseobacterium sp. JV274 Isolated from Maize Rhizosphere

Jordan Vacheron , Audrey Dubost , David Chapulliot , Claire Prigent-Combaret , Daniel Muller

Genome Announcements, 2017, 5 (15), pp.e00122-17. ⟨10.1128/genomeA.00122-17⟩

Article dans une revue hal-02487196v1

Is plant evolutionary history impacting recruitment of diazotrophs and nifH expression in the rhizosphere?

Marie-Lara Bouffaud , Sebastien Renoud , Yvan Moënne-Loccoz , Daniel Muller

Scientific Reports, 2016, 6, pp.21690. ⟨10.1038/srep21690⟩

Article dans une revue hal-02466010v1

Fluorescent Pseudomonas Strains with only Few Plant-Beneficial Properties Are Favored in the Maize Rhizosphere

Jordan Vacheron , Yvan Moënne-Loccoz , Audrey Dubost , Maximilien Gonçalves-Martins , Daniel Muller et al.

Plant Biotic Interactions, 2016, 7, pp.1212. ⟨10.3389/fpls.2016.01212⟩

Article dans une revue hal-02466008v1

Expression on roots and contribution to maize phytostimulation of 1-aminocyclopropane-1-decarboxylate deaminase gene acdS in Pseudomonas fluorescens F113

Jordan Vacheron , Emeline Combes-Meynet , Vincent Walker , B. Gouesnard , Daniel Muller et al.

Plant and Soil, 2016, 407 (1-2), pp.187-202. ⟨10.1007/s11104-016-2907-0⟩

Article dans une revue hal-02466011v1

Comparative genomics of environmental and clinical stenotrophomonas maltophiliaStrains with different antibiotic resistance profiles

Benjamin Youenou , Sabine Favre-Bonte , Josselin Bodilis , Elisabeth Brothier , Audrey Dubost et al.

Genome Biology and Evolution, 2015, 7 (9), pp.2484-2505. ⟨10.1093/gbe/evv161⟩

Article dans une revue hal-01605055v1

Ecological speciation in bacteria: reverse ecology approaches reveal the adaptive part of bacterial cladogenesis

Florent Lassalle , Daniel Muller , Xavier Nesme

Research in Microbiology, 2015, 166 (10), pp.729-741. ⟨10.1016/j.resmic.2015.06.008⟩

Article dans une revue istex hal-02547960v1

Frequent, independent transfers of a catabolic gene from bacteria to contrasted filamentous eukaryotes

Maxime Bruto , Claire Prigent-Combaret , P. Luis , Yvan Moënne-Loccoz , Daniel Muller

Proceedings of the Royal Society B: Biological Sciences, 2014, 281 (1789), pp.20140848. ⟨10.1098/rspb.2014.0848⟩

Article dans une revue hal-02487460v1

Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid

Martha H. Ramírez-Bahena , Ludovic Vial , Florent Lassalle , Benjamin Diel , David Chapulliot et al.

Molecular Phylogenetics and Evolution, 2014, 73, pp.202-207. ⟨10.1016/j.ympev.2014.01.005⟩

Article dans une revue istex hal-01010660v1

Rhizosphere ecology and phytoprotection in soils naturally suppressive to Thielaviopsis black root rot of tobacco

Juliana Almario , Daniel Muller , Geneviève Défago , Yvan Moënne-Loccoz

Environmental Microbiology, 2014, pp.1-12. ⟨10.1111/1462-2920.12459⟩

Article dans une revue istex hal-01010573v1

Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers' fields

Martina Kyselková , Juliana Almario , Jan Kopecký , Markéta Ságová-Marečková , Jacqueline Haurat et al.

Environmental Microbiology Reports, 2014, ⟨10.1111/1758-2229.12131⟩

Article dans une revue istex hal-01010640v1

Analysis of genes contributing to plant-beneficial functions in plant growth-promoting rhizobacteria and related Proteobacteria

Maxime Bruto , Claire Prigent-Combaret , Daniel Muller , Yvan Moënne-Loccoz

Scientific Reports, 2014, 4, pp.6261. ⟨10.1038/srep06261⟩

Article dans une revue hal-02487456v1

Root microbiome relates to plant host evolution in maize and other Poaceae

Marie-Lara Bouffaud , Marie-Andrée Poirier , Daniel Muller , Yvan Moënne-Loccoz

Environmental Microbiology, 2014, ⟨10.1111/1462-2920.12442⟩

Article dans une revue istex hal-01010591v1

Rhizosphere microbial communities associated with Rhizoctonia damage at the field and disease patch scale

Suzanne Donn , Juliana Almario , Daniel Muller , Yvan Moënne-Loccoz , Vadakattu V.S.R. Gupta et al.

Applied Soil Ecology, 2014, 78, pp.37-47. ⟨10.1016/j.apsoil.2014.02.001⟩

Article dans une revue istex hal-01010607v1

Unexpected phytostimulatory behavior for Escherichia coli and Agrobacterium tumefaciens model strains.

Vincent Walker , Maxime Bruto , Floriant Bellvert , René Bally , Daniel Muller et al.

Molecular Plant-Microbe Interactions, 2013, 26 (5), pp.495-502. ⟨10.1094/MPMI-12-12-0298-R⟩

Article dans une revue hal-00965830v1

Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26.

Jérémy Andres , Florence Arsène-Ploetze , Valérie Barbe , Céline Brochier-Armanet , Jessica Cleiss-Arnold et al.

Genome Biology and Evolution, 2013, 5 (5), pp.934-53. ⟨10.1093/gbe/evt061⟩

Article dans une revue hal-00972245v1

Investigating the species and strain diversity of agrobacteria by MLSA: toward a phylogenetically relevant redefinition of the genus Agrobacterium.

X. Nesme , D. Costechareyre , M. H. R. Bahena , Daniel Muller , J. Nesme et al.

Frontiers in Plant-Microbe Interaction, 2013

Article dans une revue hal-02522212v1

Effect of Clay Mineralogy on Iron Bioavailability and Rhizosphere Transcription of 2,4-Diacetylphloroglucinol Biosynthetic Genes in Biocontrol Pseudomonas protegens

Juliana Almario , Claire Prigent-Combaret , Daniel Muller , Yvan Moënne-Loccoz

Molecular Plant-Microbe Interactions, 2013, 26 (5), pp.566-574. ⟨10.1094/MPMI-11-12-0274-R⟩

Article dans une revue hal-02522202v1

Assessment of the relationship between geologic origin of soil, rhizobacterial community composition and soil receptivity to tobacco black root rot in Savoie region (France)

Juliana Almario , Martina Kyselková , J. Kopecký , M. Ságová-Marečková , Daniel Muller et al.

Plant and Soil, 2013, pp.1-12. ⟨10.1007/s11104-013-1677-1⟩

Article dans une revue istex hal-02522203v1

Plant growth-promoting rhizobacteria and root system functioning

Jordan Vacheron , G. Desbrosses , Marie.-Lara Bouffaud , B. Touraine , Yvan Moënne-Loccoz et al.

Frontiers in Plant Science, 2013, 4, pp.356. ⟨10.3389/fpls.2013.00356⟩

Article dans une revue hal-02522224v1

Unified Nomenclature for Genes Involved in Prokaryotic Aerobic Arsenite Oxidation

Marie-Claire Lett , Daniel Muller , Didier Lièvremont , Simon Silver , Joanne Santinid

Journal of Bacteriology, 2012, pp.207-208. ⟨10.1128/JB.06391-11⟩

Article dans une revue halsde-00722718v1

Rapid and simultaneous detection of linear chromosome and large plasmids in Proteobacteria

Martha Helena Ramírez-Bahena , Xavier Nesme , Daniel Muller

Journal of Basic Microbiology, 2012, 52 (52), pp.1-4. ⟨10.1002/jobm.201100278⟩

Article dans une revue istex halsde-00723073v1

Monitoring of the relation between 2,4-diacetylphloroglucinol-producing Pseudomonas and Thielaviopsis basicola populations by real-time PCR in tobacco black root-rot suppressive and conducive soils

Juliana Almario , Yvan Moënne-Loccoz , Daniel Muller

Soil Biology and Biochemistry, 2012, ⟨10.1016/j.soilbio.2012.09.003⟩

Article dans une revue istex hal-02532808v1

Is diversification history of maize influencing selection of soil bacteria by roots?

Marie-Lara Bouffaud , Martina Kyselková , Brigitte Gouesnard , Genevieve Grundmann , Daniel Muller et al.

Molecular Ecology, 2012, 21 (1), pp.195-206. ⟨10.1111/j.1365-294X.2011.05359.x⟩

Article dans une revue halsde-00722561v1

Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens

Florent Lassalle , Tony Campillo , Ludovic Vial , Jessica Baude , Denis Costechareyre et al.

Genome Biology and Evolution, 2011, 3 (3), pp.762-781. ⟨10.1093/gbe/evr070⟩

Article dans une revue halsde-00723400v1

Development of a real-time PCR method to quantify the PGPR strain Azospirillum lipoferum CRT1 on maize seedlings

Olivier Couillerot , Marie-Lara Bouffaud , Baudoin Ezékiel , Daniel Muller , Jesus Caballero-Mellado et al.

Soil Biology and Biochemistry, 2010, 42 (12), pp.2298-2305. ⟨10.1016/j.soilbio.2010.09.003⟩

Article dans une revue istex hal-00874738v1

Structure, function, and evolution of the Thiomonas spp. genome.

Florence Arsène-Ploetze , Sandrine Koechler , Marie Marchal , Jean-Yves Coppée , Michael Chandler et al.

PLoS Genetics, 2010, 6 (2), pp.e1000859. ⟨10.1371/journal.pgen.1000859⟩

Article dans une revue hal-00463879v1

Arsenite Oxidase from Ralstonia sp. 22: characterization of the enzyme and its interaction with soluble cytochromes.

Aurélie Lieutaud , Robert van Lis , Simon Duval , Line Capowiez , Daniel Muller et al.

Journal of Biological Chemistry, 2010, 285 (27), pp.20433-20441. ⟨10.1074/jbc.M110.113761⟩

Article dans une revue hal-01602032v1

Arsenite oxidation by a chemoautotrophic moderately acidophilic Thiomonas sp.: from the strain isolation to the gene study.

M.-C. Lett , Aurélie Lieutaud , Daniel Muller , J. Ratouchniak , V. Bonnefoy et al.

Environmental Microbiology, 2008, 10 (1), pp.228-37. ⟨10.1111/j.1462-2920.2007.01447.x⟩

Article dans une revue istex hal-00281294v1

Diversity surveys and evolutionary relationships of aoxB genes in aerobic arsenite-oxidizing bacteria.

Marianne Quéméneur , Audrey Heinrich-Salmeron , Daniel Muller , Didier Lièvremont , Michel Jauzein et al.

Applied and Environmental Microbiology, 2008, 74 (14), pp.4567-73. ⟨10.1128/AEM.02851-07⟩

Article dans une revue hal-00370780v1

A tale of two oxidation states: bacterial colonization of arsenic-rich environments.

Daniel Muller , Claudine Médigue , Sandrine Koechler , Valérie Barbe , mohamed Barakat et al.

PLoS Genetics, 2007, 3 (4), pp.e53. ⟨10.1371/journal.pgen.0030053⟩

Article dans une revue hal-00340034v1

A Bacterial Effector Targets Mad2L2, an APC Inhibitor, to Modulate Host Cell Cycling

Hiroki Iwai , Minsoo Kim , Yuko Yoshikawa , Hiroshi Ashida , Michinaga Ogawa et al.

Cell, 2007, 130 (4), pp.611-623. ⟨10.1016/j.cell.2007.06.043⟩

Article dans une revue hal-04245669v1

Herminiimonas arsenicoxydans sp. nov., a metalloresistant bacterium.

Daniel Muller , Diliana D Simeonova , Philippe Riegel , Sophie Mangenot , Sandrine Koechler et al.

International Journal of Systematic and Evolutionary Microbiology, 2006, 56 (Pt 8), pp.1765-9. ⟨10.1099/ijs.0.64308-0⟩

Article dans une revue hal-00113703v1

Identification of genes and proteins involved in the pleiotropic response to arsenic stress in Caenibacter arsenoxydans, a metalloresistant beta-proteobacterium with an unsequenced genome.

Christine Carapito , Daniel Muller , Evelyne Turlin , Sandrine Koechler , Antoine Danchin et al.

Biochimie, 2006, 88 (6), pp.595-606. ⟨10.1016/j.biochi.2005.11.004⟩

Article dans une revue istex hal-00370783v1

Chemiluminescence of enterococci isolates from freshwater.

Philippe Andre , Catherine Metzger , Sophie Petey , Dominique J-M Vidon , Daniel Muller

Microbiology Letters, 2005, 245 (1), pp.123-9. ⟨10.1016/j.femsle.2005.02.036⟩

Article dans une revue istex hal-00106769v1

Arsenite oxidation in batch reactors with alginate‐immobilized ULPAs1 strain

Diliana Simeonova , Kalina Micheva , Daniel A.E. Muller , Florence Lagarde , Marie‐claire Lett et al.

Biotechnology and Bioengineering, 2005, 91 (4), pp.441-446. ⟨10.1002/bit.20530⟩

Article dans une revue istex hal-04250284v1

Microplate screening assay for the detection of arsenite-oxidizing and arsenate-reducing bacteria

Diliana Simeonova , Florence Lagarde , Daniel A.E. Muller , Veneta Groudeva , Marie-Claire Lett

FEMS Microbiology Letters, 2004, 237 (2), pp.249-253. ⟨10.1111/j.1574-6968.2004.tb09703.x⟩

Article dans une revue hal-04247135v1

Arsenite oxidase, an ancient bioenergetic enzyme.

Evelyne Lebrun , Myriam Brugna , Frauke Baymann , Daniel Muller , Didier Lièvremont et al.

Molecular Biology and Evolution, 2003, 20 (5), pp.686-93. ⟨10.1093/molbev/msg071⟩

Article dans une revue hal-00113712v1

Arsenite oxidase aox genes from a metal-resistant beta-proteobacterium.

Daniel Muller , Didier Lièvremont , Diliana Dancheva Simeonova , Jean-Claude Hubert , Marie-Claire Lett

Journal of Bacteriology, 2003, 185 (1), pp.135-41

Article dans une revue hal-00113723v1

Alleviation of Abiotic and Biotic Stresses in Plants by Azospirillum

Jordan Vacheron , Sébastien Renoud , Daniel Muller , Olubukola Oluranti Babalola , Claire Prigent-Combaret

Fabricio Dario Cassán; Yaacov Okon; Cecilia M. Creus. Handbook for Azospirillum, Springer International Publishing, pp.333-365, 2015, 978-3-319-06542-7. ⟨10.1007/978-3-319-06542-7_19⟩

Chapitre d'ouvrage hal-02457880v1

Plant growth-promoting properties of Pseudomonas biocontrol agent producing 2,4 diacetylphloroglucinol

Jordan Vacheron , Emeline Combes-Meynet , Yvan Moënne-Loccoz , Daniel Muller , Claire Prigent Combaret

Cédric Bertrand. Natural Products and Biocontrol, Presses universitaires de Perpignan, 2014, 978-2-35412-234-8

Chapitre d'ouvrage hal-02479158v1

Horizontal Acquisition of Prokaryotic Genes for Eukaryote Functioning and Niche Adaptation

Maxime Bruto , Claire Prigent Combaret , Patricia Luis , Gregory Hoff , Yvan Moënne-Loccoz et al.

Evolutionary Biology : Exobiology and Evolutionary Mechanisms, Springer, 2013, 978-3-642-38211-6. ⟨10.1007/978-3-642-38212-3_11⟩

Chapitre d'ouvrage hal-02563676v1

Rapid and Efficient Methods to Isolate, Type Strains and Determine Species of Agrobacterium spp. in Pure Culture and Complex Environments

Malek Shams , Tony Campillo , Céline Lavire , Daniel Muller , Xavier Nesme et al.

Biochemical Testing, InTech, 2012, 978-953-51-0249-6. ⟨10.5772/36068⟩

Chapitre d'ouvrage hal-02566900v1

Wheat genotypes and their interaction with plant-beneficial bacteria

Jordan Valente , Christophe Gruet , Florence Gerin , Agathe Mini , Rémi Richard et al.

5. Cereals Breeding and Biotechnology Conference (CBB5), AK Congress; European Association for Research on Plant Breeding, Nov 2019, Budapest, Hungary

Communication dans un congrès hal-02937622v1

Interactions of plant-beneficial rhizosphere bacteria according to cereal genotype

Yvan Moenne-Loccoz , Jordan Valente , Marie-Lara Bouffaud , Brigitte Gouesnard , Jacques Le Gouis et al.

EUCARPIA Cereal section Meeting "Breeeding cereals for sustainable agriculture, Mar 2018, Clermont-Ferrand, France

Communication dans un congrès hal-02338153v1

Significance of the evolution of Zea mays and other Poaceae for rhizobacterial community composition

Daniel Muller , Marie-Lara Bouffaud , Brigitte Gouesnard , Yvan Moënne-Loccoz

16th Evolutionary Biology Meeting, Sep 2012, Marseille, France

Communication dans un congrès hal-02544401v1

Extensive interkingdom horizontal transfers of 1-aminocyclopropane-1-carboxylate deaminase genes between bacteria and filamentous microeukaryotes

Maxime Bruto , Claire Prigent Combaret , Yvan Moënne-Loccoz , Daniel Muller

16. Evolutionary Biology Meeting, Sep 2012, Marseille, France

Communication dans un congrès hal-02545169v1

Histoire évolutive des céréales et composition de la communauté bactérienne rhizosphérique

Maxime Bruto , Claire Prigent-Combaret , Daniel Muller , Yvan Moënne-Loccoz

10th Plant-Bacteria Interactions Meeting, Jan 2012, Aussois, France

Communication dans un congrès hal-02544381v1

Etude génomique des déterminants codant les propriétés phytobénéfiques des Protéobactéries

Maxime Bruto , Claire Prigent Combaret , Daniel Muller , Yvan Moënne-Loccoz

10. Plant-Bacteria Interactions Meeting, Jan 2012, Aussois, France

Communication dans un congrès hal-02545219v1

Evaluation of 2,4-diacetylphloroglucinol fluorescent Pseudomonas for plant growth promotion

Jordan Vacheron , F. Bellvert , Yvan Moënne-Loccoz , Daniel Muller , Claire Prigent Combaret

1st World Congress On Biostimulants on Agriculture, Nov 2012, Strasbourg, France

Communication dans un congrès hal-02544356v1

Effect of clay mineralogy on the plant-protecting activity of Pseudomonas in the rhizosphere

Juliana Almario , Claire Prigent Combaret , Daniel Muller , Yvan Moënne-Loccoz

2nd meeting of Ph.D. students in Ecology, Evolution, Microbiology and Modelization, Mar 2012, VIlleurbanne, France

Communication dans un congrès hal-02547978v1

Relation between landscape distribution of disease-suppressive soils, iron bioavailability for biocontrol Pseudomonas on roots, and rhizosphere expression of genes for 2,4-diacetylphloroglucinol synthesis

Juliana Almario , Claire Prigent Combaret , Daniel Muller , Yvan Moënne-Loccoz

14. International Symposium on Microbial Ecology- ISME14, Aug 2012, Copenhaguen, Denmark

Communication dans un congrès hal-02545176v1

Particularités génomiques et adaptations spécifiques des espèces bactériennes : cas d'Agrobacterium fabrum

Tony Campillo , Jessica Baude , Ludovic Vial , Floriant Bellvert , Florent Lassalle et al.

10. Plant-Bacteria Interactions Meeting, 2012, Aussois, France

Communication dans un congrès hal-02547657v1

Plant evolution and diversification a factor influencing selection of soil bacteria by roots

Daniel Muller , Marie-Lara Bouffaud , Brigitte Gouesnard , Yvan Moënne-Loccoz

Rhizosphere 3 International Conference 2011, Sep 2011, Perth, Australia

Communication dans un congrès hal-02545550v1

Impact of plant evolutionary history on the recruitment and functioning of phytobeneficial rhizobacterial communities

Marie-Lara Bouffaud , Yvan Moënne-Loccoz , Daniel Muller

Rhizosphere 3 International Conference, Sep 2011, Perth, Australia

Communication dans un congrès hal-02545584v1

La notion d'espèce en écologie microbienne

T. Campillo , Malek Shams , Sally Burr , Martha Helena Ramírez-Bahena , Florent Lassalle et al.

1er Colloque National d'Ecologie Scientifique, Dec 2010, Montpellier, France

Communication dans un congrès hal-02545628v1

Toward an ecological concept for bacterial species in Agrobacterium

Tony Campillo , Florent Lassalle , M. Shams , Martha Helena Ramírez-Bahena , Jessica Baude et al.

12th International Conference on Plant Pathogenic Bacteria, Jun 2010, Saint-Denis de La Réunion, France

Communication dans un congrès hal-02545712v1

Identification de fonctions « spécifiques d'espèce » impliquées dans l'individualisation en écovar de l’espèce G8 du complexe Agrobacterium tumefaciens

Florent Lassalle , Daniel Muller , Denis Costechareyre , David Chapulliot , Celine Lavire et al.

Journées des Microbiologistes de l'INRA, May 2010, Poitiers, France

Communication dans un congrès hal-02545733v1

Chargement...