
DV
David Vallenet
62%
Libre accès
122
Documents
Affiliation actuelle
- Analyse Bio-Informatique pour la Génomique et le Métabolisme (LABGeM)
Identifiants chercheurs
Présentation
Domaines de recherche
Génomique, Transcriptomique et Protéomique [q-bio.GN]
Bio-Informatique, Biologie Systémique [q-bio.QM]
Bactériologie
Sciences du Vivant [q-bio]
Publications
Publications
Diverse Amine dehydrogenases for the biocatalytic synthesis of aminesENZYNOV'2, Oct 2023, Paris-Romainville, France
Communication dans un congrès
hal-04327765
v1
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Expanding the portfolio of native Amine Dehydrogenases by extensive biodiversity screeningBioTrans 2023, Jun 2023, La Rochelle, France
Communication dans un congrès
hal-04327737
v1
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Expanding the portfolio of enzymes for biocatalysis by extensive biodiversity screening6e Symposium International de l'AFERP, Jul 2023, Orsay - Paris, France
Communication dans un congrès
hal-04327790
v1
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PANORAMA: comparative pangenomics tools to explore interspecies diversity of microbial genomesThe local pangenome, Oct 2023, Alicante, Spain
Communication dans un congrès
hal-04371302
v1
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PANORAMA: comparative pangenomics tools to explore interspecies diversity of microbial genomesISMB/ECCB 2023, ISCB ECCB, Jul 2023, Lyon, France
Communication dans un congrès
hal-04371284
v1
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The MicroScope platform: 20 years of expertise in microbial genomicsThe 20th MicroScope anniversary, Alexandra Calteau; David Vallenet, Sep 2023, Evry-Courcouronnes, France
Communication dans un congrès
hal-04370626
v1
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PPanGGOLiN V2: technical enhancement and new features to analyze thousands of prokaryotic genomesThe local pangenome, Oct 2023, Alicante, Spain
Communication dans un congrès
hal-04371316
v1
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Expanding the portfolio of native Amine Dehydrogenases by extensive biodiversity screeningAmine BioCat 5.0, Nov 2022, Groningen, Netherlands
Communication dans un congrès
hal-04328280
v1
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Des pangénomes des microorganismes aux microbiotesLes pangénomes, mise à jour et exploitation en agriculture, Académie d'Agriculture de France, Apr 2022, Paris, France
Communication dans un congrès
hal-04360283
v1
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Metagenomic expansion and active site analysis of the Amine Dehydrogenase familyInternational Congress on Biocatalysis 2022, Aug 2022, Hamburg, Germany
Communication dans un congrès
hal-04360123
v1
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Large scale exploration of the biocatalytic capability of biodiversity for biocatalysis & synthetic biology applicationsFirst International symposium on High-Throughput Catalysts Design, Jun 2021, Virtual conference (Lille), France
Communication dans un congrès
hal-04315412
v1
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MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using innovative in silico approachesInternational Symposium on High-Throughput Catalyst Design, Jun 2021, Lille (Virtual), France
Communication dans un congrès
hal-04328578
v1
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panRGP: a pangenome-based method to predict genomic islands and explore their diversityJOBIM 2021 Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2021, Paris (virtual), France
Communication dans un congrès
hal-04360257
v1
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MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using sequence and structure-based approaches29th Conference on Intelligent Systems for Molecular Biology (ISMB) - 20th European Conference on Computational Biology (ECCB), Jul 2021, Virtual conference, United States
Communication dans un congrès
hal-04359840
v1
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panRGP: a pangenome-based method to predict genomic islands and explore their diversitythe 19th European Conference on Computational Biology, ECCB 2020, Aug 2020, Barcelona (Virtual), Spain
Communication dans un congrès
hal-04360043
v1
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Depicting microbial species diversity via a partitioned pangenome graphAnimation Thématique "Pan-génomique végétale", GIS Biotechnologies Vertes, Jul 2019, Paris, France
Communication dans un congrès
hal-04359803
v1
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Exploring biodiversity for biocatalyst discovery: applications to synthetic chemistry and synthetic biologyGMGM Open Scientific day & IPCB Inauguration, May 2019, Strabourg, France
Communication dans un congrès
hal-04315453
v1
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MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic and metabolic comparative analysisThe 8th Congress of European Microbiologists, FEMS 2019, Jul 2019, Glasgow, United Kingdom
Communication dans un congrès
hal-04358401
v1
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Comparative microbial pangenomics to explore mobilome dynamicsThe 8th Congress of European Microbiologists, FEMS 2019, Jul 2019, Glasgow, United Kingdom
Communication dans un congrès
hal-04359455
v1
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PPanGGOLiN: Depicting microbial diversity via a Partitioned Pangenome GraphGenome Informatics 2018, Sep 2018, Hinxton, Cambridge, United Kingdom
Communication dans un congrès
hal-04356757
v1
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Genome Mining for Enzyme Discovery: the role of bioinformatics20 ans Protéus, Sep 2018, Nîmes (France), France
Communication dans un congrès
hal-04356328
v1
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PPanGGOLiN: Depicting microbial diversity via a Partitioned Pangenome GraphJOBIM 2018 Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2018, Marseille, France
Communication dans un congrès
hal-04355945
v1
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Exploration of Acinetobacter baylyi ADP1 sulfur metabolismMicroScope Open Days (MOD), Laboratory of Bioinformatics Analyses for Genomics and Metabolism, May 2018, Paris, France
Communication dans un congrès
hal-04315489
v1
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Analyzing prokaryotic transcriptomics in the light of genome data with the MicroScope platformFrancis Martin; Stephane Uroz. Microbial Environmental Genomics (MEG), 2605, Springer US, pp.241-270, 2022, Methods in Molecular Biology, 978-1-0716-2871-3. ⟨10.1007/978-1-0716-2871-3_13⟩
Chapitre d'ouvrage
cea-04286744
v1
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Pesticidal genes and methods of useFrance, Patent n° : WO2020183022A1. 2020
Brevet
hal-04355519
v1
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NetSyn: genomic context exploration of protein families2023
Pré-publication, Document de travail
(preprint/prepublication)
hal-04301713
v1
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panModule: detecting conserved modules in the variable regions of a pangenome graph2021
Pré-publication, Document de travail
hal-04371147
v1
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Rapport de conjoncture 2019 : CID 51 Modélisation mathématique, informatique et physique pour les sciences du vivantComité national de la recherche scientifique. 2020
Rapport
hal-04360199
v1
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Des génomes au métabolisme des microorganismesBio-Informatique, Biologie Systémique [q-bio.QM]. Université d'Évry-Val-d'Essonne, 2020
HDR
tel-04355465
v1
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