Veronique De Berardinis

Directrice adjointe UMR Génomique Métabolique; Adjointe au Directeur du Genoscope ; Cheffe du Laboratoire de Génomique et Biochimie du Métabolisme
115
Documents
Affiliations actuelles
  • Laboratoire de Génomique et Biochimie du Métabolisme (LGBM)
  • Génomique métabolique (UMR 8030)

Domaines de recherche

Sciences du Vivant [q-bio] Biochimie, Biologie Moléculaire Génomique, Transcriptomique et Protéomique [q-bio.GN]

Publications

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Publications

Biocatalytic Recycling Cascades Combining Aldolases and Transaminases for the Stereo‐Controlled Synthesis of γ‐Hydroxy‐α‐Amino Acids

Léa Gourbeyre , Jules Perrard , Stephany Bouzid , Alexandre Matéos , Virgil Hélaine et al.
Advanced Synthesis and Catalysis, 2024, ⟨10.1002/adsc.202400285⟩
Article dans une revue hal-04742250 v1
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A refined picture of the native amine dehydrogenase family revealed by extensive biodiversity screening

Eddy Elisée , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
Nature Communications, 2024, 15, pp.4933. ⟨10.1038/s41467-024-49009-2⟩
Article dans une revue hal-04645174 v1

Insights on DHAP Aldolases ability to convert Dioxygen or a Ketone as Electrophile: use of a Strain Depleted in Triose Phosphate Isomerase

Léo Paulat , Victor Laurent , Virgil Hélaine , Mariline Théveniot , Jean‐louis Petit et al.
ChemCatChem, 2024, ⟨10.1002/cctc.202400202⟩
Article dans une revue cea-04510112 v1

Exploring the synthetic potential of dihydroxyacetone-aldolases from acidophilic organisms

Léo Paulat , Cédric Gastaldi , Lionel Nauton , Mariline Theveniot , Muriel Joly et al.
Catalysis Science & Technology, 2024, 14 (17), pp.5107-5113. ⟨10.1039/D4CY00747F⟩
Article dans une revue hal-04794209 v1

Discovery and Enzymatic Screening of Genome-Mined Microbial Levanases to Produce Second-Generation β-(2,6)-Fructooligosaccharides: Catalytic Properties

Lily Chen , Andrea Hill , Jean-Louis Petit , Aline Mariage , Véronique de Berardinis et al.
ACS Chemical Biology, 2023, 18 (3), pp.465-475. ⟨10.1021/acschembio.2c00728⟩
Article dans une revue hal-04150674 v1
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<i>In vitro</i> Applications of the Terpene Mini‐Path 2.0

Julie Couillaud , Agnès Amouric , Elise Courvoisier-Dezord , Létitia Leydet , Nicolas Schweitzer et al.
ChemBioChem, 2022, 23 (24), pp.e202200595. ⟨10.1002/cbic.202200595⟩
Article dans une revue hal-03935973 v1
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Photobiocatalytic Oxyfunctionalization with High Reaction Rate using a Baeyer–Villiger Monooxygenase from Burkholderia xenovorans in Metabolically Engineered Cyanobacteria

Elif Erdem , Lenny Malihan-Yap , Leen Assil-Companioni , Hanna Grimm , Giovanni Davide Barone et al.
ACS Catalysis, 2022, 12 (1), pp.66-72. ⟨10.1021/acscatal.1c04555⟩
Article dans une revue hal-03864568 v1

Purification and Characterization of Nitphym, a Robust Thermostable Nitrilase From Paraburkholderia phymatum

Thomas Bessonnet , Aline Mariage , Jean-Louis Petit , Virginie Pellouin , Adrien Debard et al.
Frontiers in Bioengineering and Biotechnology, 2021, 9, ⟨10.3389/fbioe.2021.686362⟩
Article dans une revue cea-03664095 v1

One Step Forward in Exploration of Class II Pyruvate Aldolases Nucleophile and Electrophile Substrate Specificity

Cédric Gastaldi , Rolande Ngahan Tagne , Victor Laurent , Virgil Hélaine , Jean-Louis Petit et al.
ChemCatChem, 2021, 13 (18), pp.3920-3924. ⟨10.1002/cctc.202100932⟩
Article dans une revue hal-03434880 v1

Nitrilase immobilization and transposition from a micro‐scale batch to a continuous process increase the nicotinic acid productivity

Chalore Teepakorn , Petra Zajkoska , Gregory Cwicklinski , Véronique de Berardinis , Anne Zaparucha et al.
Biotechnology Journal, 2021, 16 (10), pp.2100010. ⟨10.1002/biot.202100010⟩
Article dans une revue hal-03664115 v1
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Biocatalysed Synthesis of Chiral Amines: Continuous Colorimetric Assays for Mining Amine-Transaminases

Léa Gourbeyre , Egon Heuson , Franck Charmantray , Virgil Hélaine , Adrien Debard et al.
Catalysis Science & Technology, 2021, 11 (3), pp.904-911. ⟨10.1039/D0CY02070B⟩
Article dans une revue hal-03191963 v1

Metagenomic Mining for Amine Dehydrogenase Discovery

Adam Caparco , Eric Pelletier , Jean Louis Petit , Aurélie Jouenne , Bettina Bommarius et al.
Advanced Synthesis and Catalysis, 2020, 362 (12), pp.2427-2436. ⟨10.1002/adsc.202000094⟩
Article dans une revue hal-04150129 v1
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Pyruvate Aldolases Catalyze Cross-Aldol Reactions between Ketones: Highly Selective Access to Multi-Functionalized Tertiary Alcohols

Victor Laurent , Léa Gourbeyre , Alexandre Uzel , Virgil Hélaine , Lionel Nauton et al.
ACS Catalysis, 2020, 10 (4), pp.2538-2543. ⟨10.1021/acscatal.9b05512⟩
Article dans une revue hal-02907546 v1
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Continuous Culture Adaptation of Methylobacterium extorquens AM1 and TK 0001 to Very High Methanol Concentrations

Sophia Belkhelfa , David Roche , Ivan Dubois , Anne Berger , Valérie A Delmas et al.
Frontiers in Microbiology, 2019, 10, ⟨10.3389/fmicb.2019.01313⟩
Article dans une revue hal-02323743 v1

Discovery of new levansucrase enzymes with interesting properties and improved catalytic activity to produce levan and fructooligosaccharides

Andrea Hill , Lily Chen , Aline Mariage , Jean-Louis Petit , Véronique de Berardinis et al.
Catalysis Science & Technology, 2019, 9 (11), pp.2931-2944. ⟨10.1039/c9cy00135b⟩
Article dans une revue hal-04150226 v1
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A family of native amine dehydrogenases for the asymmetric reductive amination of ketones

Ombeline Mayol , Karine Bastard , Lilian Beloti , Amina Frese , Johan P Turkenburg et al.
Nature Catalysis, 2019, 2 (4), pp.324-333. ⟨10.1038/s41929-019-0249-z⟩
Article dans une revue hal-02945525 v1
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Exploring natural biodiversity to expand access to microbial terpene synthesis

Juan Rico , Katia Duquesne , Jean-Louis Petit , Aline Mariage , Ekaterina Darii et al.
Microbial Cell Factories, 2019, 18, pp.23. ⟨10.1186/s12934-019-1074-4⟩
Article dans une revue hal-02025505 v1
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Tuning of the enzyme ratio in a neutral redox convergent cascade: A key approach for an efficient one‐pot/two‐step biocatalytic whole‐cell system

Sidiky Ménil , Jean-Louis Petit , Elise Courvoisier-Dezord , Adrien Debard , Virginie Pellouin et al.
Biotechnology and Bioengineering, 2019, 116 (11), pp.2852-2863. ⟨10.1002/bit.27133⟩
Article dans une revue hal-03064469 v1

Exploration of Aldol Reactions Catalyzed by Stereoselective Pyruvate Aldolases with 2‐Oxobutyric Acid as Nucleophile

V. Laurent , A. Uzel , V. Helaine , L. Nauton , M. Traïkia et al.
Advanced Synthesis and Catalysis, 2019, ⟨10.1002/adsc.201900128⟩
Article dans une revue hal-02195027 v1

2-Deoxyribose-5-phosphate aldolase, a remarkably tolerant aldolase towards nucleophile substrates

Domitille Chambre , Christine Guérard-Hélaine , Ekaterina Darii , Aline Mariage , Jean-Louis Petit et al.
Chemical Communications, 2019, 55 (52), pp.7498-7501. ⟨10.1039/C9CC03361K⟩
Article dans une revue hal-02195148 v1
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XszenFHal, a novel tryptophan 5-halogenase from Xenorhabdus szentirmaii

Jérémy Domergue , Diane Erdmann , Aurélie Fossey-Jouenne , Jean-Louis Petit , Adrien Debard et al.
AMB Express, 2019, 9 (1), pp.175. ⟨10.1186/s13568-019-0898-y⟩
Article dans une revue pasteur-03026562 v1

Achiral Hydroxypyruvaldehyde Phosphate as a Platform for Multi-Aldolases Cascade Synthesis of Diuloses and for a Quadruple Acetaldehyde Addition Catalyzed by 2-Deoxyribose-5-Phosphate Aldolases

Victor Laurent , Virgil Hélaine , Carine Vergne-Vaxelaire , Lionel Nauton , Mounir Traïkia et al.
ACS Catalysis, 2019, 9 (10), pp.9508-9512. ⟨10.1021/acscatal.9b02668⟩
Article dans une revue hal-02329545 v1

Simplified in Vitro and in Vivo Bioaccess to Prenylated Compounds

Julie Couillaud , Juan Rico , Alyssa Rubini , Tarek Hamrouni , Elise Courvoisier-Dezord et al.
ACS Omega, 2019, 4 (4), pp.7838-7849. ⟨10.1021/acsomega.9b00561⟩
Article dans une revue hal-04167150 v1
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Enantioselective Synthesis of d - and l -α-Amino Acids by Enzymatic Transamination Using Glutamine as Smart Amine Donor

Egon Heuson , Franck Charmantray , Jean-Louis Petit , Véronique de Berardinis , Thierry Gefflaut
Advanced Synthesis and Catalysis, 2019, 361 (4), pp.778-785. ⟨10.1002/adsc.201801278⟩
Article dans une revue hal-02195006 v1
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Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

Yoann Seeleuthner , Samuel Mondy , Vincent Lombard , Quentin Carradec , Eric Pelletier et al.
Nature Communications, 2018, 9, pp.310. ⟨10.1038/s41467-017-02235-3⟩
Article dans une revue hal-01771839 v1
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Synthesis of Branched-Chain Sugars with a DHAP-Dependent Aldolase: Ketones are Electrophile Substrates of Rhamnulose-1- phosphate Aldolases

Victor Laurent , Ekaterina Darii , Angelina Aujon , Marine Debacker , Jean-Louis Petit et al.
Angewandte Chemie International Edition, 2018, 57 (19), pp.5467 - 5471. ⟨10.1002/anie.201712851⟩
Article dans une revue hal-02323732 v1
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Characterization of a thermotolerant ROK-type mannofructokinase from Streptococcus mitis: application to the synthesis of phosphorylated sugars

Carine Vergne-Vaxelaire , Aline Mariage , Jean-Louis Petit , Aurélie Fossey-Jouenne , Christine Guérard-Hélaine et al.
Applied Microbiology and Biotechnology, 2018, 102 (13), pp.5569-5583. ⟨10.1007/s00253-018-9018-1⟩
Article dans une revue hal-02323767 v1
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Elucidation of the trigonelline degradation pathway reveals previously undescribed enzymes and metabolites

Nadia Perchat , Pierre-Loïc Saaidi , Ekaterina Darii , Christine Pellé , Jean-Louis Petit et al.
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (19), pp.E4358-E4367. ⟨10.1073/pnas.1722368115⟩
Article dans une revue hal-02323695 v1
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One-pot, two-step cascade synthesis of naturally rare L-$erythro$ (3S,4S) ketoses by coupling thermostable transaminase and transketolase.

Marion Lorillière , Maxime De Sousa , Felipe Bruna , Egon Heuson , Thierry Gefflaut et al.
Green Chemistry, 2017, 19, pp.425-435. ⟨10.1039/C6GC02015A⟩
Article dans une revue hal-01540859 v1

Expanding the reaction space of aldolases using hydroxypyruvate as a nucleophilic substrate

Véronique de Berardinis , Christine Guérard-Hélaine , Ekaterina Darii , Karine Bastard , Virgil Hélaine et al.
Green Chemistry, 2017, 19, pp.519-526. ⟨10.1039/C6GC02652D⟩
Article dans une revue hal-01540868 v1

Parallel evolution of non-homologous isofunctional enzymes in methionine biosynthesis

Karine Bastard , Alain Perret , Aline Mariage , Thomas Bessonnet , Agnès Pinet-Turpault et al.
Nature Chemical Biology, 2017, 13, pp.858-866. ⟨10.1038/nchembio.2397⟩
Article dans une revue cea-02132779 v1
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Stereoselective synthesis of γ-hydroxy-α-amino acids through aldolase–transaminase recycling cascades

Christine Hélaine , Egon Heuson , Moussa Ndiaye , Léa Gourbeyre , Marielle Lemaire et al.
Chemical Communications, 2017, 53 (39), pp.5465 - 5468. ⟨10.1039/C7CC00742F⟩
Article dans une revue hal-01650816 v1

Biocatalytic Approaches towards the Synthesis of Chiral Amino Alcohols from Lysine: Cascade Reactions Combining alpha-Keto Acid Oxygenase Hydroxylation with Pyridoxal Phosphate- Dependent Decarboxylation

Damien Baud , Olivier Peruch , Pierre-Loïc Saaidi , Aurélie Fossey , Aline Mariage et al.
Advanced Synthesis & Catalysis, 2017, 359 (9), pp.1563-1569. ⟨10.1002/adsc.201600934⟩
Article dans une revue hal-04167194 v1

Osmotic stress response in Acinetobacter baylyi: identification of a glycine-betaine biosynthesis pathway and regulation of osmoadaptive choline uptake and glycine-betaine synthesis through a choline-responsive BetI repressor

Anica Scholz , Julia Stahl , Veronique De Berardinis , Volker Müller , Beate Averhoff
Environmental Microbiology Reports, 2016, 8 (2), pp.316-322. ⟨10.1111/1758-2229.12382⟩
Article dans une revue istex cea-04541797 v1

Asymmetric reductive amination by a wild-type amine dehydrogenase from the thermophilic bacteria Petrotoga mobilis

Ombeline Mayol , Sylvain David , Ekaterina Darii , Adrien Debard , Aline Mariage et al.
Catalysis Science & Technology, 2016, 6 (20), pp.7421-7428. ⟨10.1039/C6CY01625A⟩
Article dans une revue hal-04177990 v1
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Genetic Dissection of the Type VI Secretion System in Acinetobacter and Identification of a Novel Peptidoglycan Hydrolase, TagX, Required for Its Biogenesis

Brent Weber , Seth Hennon , Meredith Wright , Nichollas Scott , Véronique de Berardinis et al.
mBio, 2016, 7 (5), pp.e01253-16. ⟨10.1128/mBio.01253-16⟩
Article dans une revue hal-04167263 v1

Design of Artificial Metabolisms in Layered Nanomaterials for the Enzymatic Synthesis of Phosphorylated Sugars.

Rima Mahdi , Christine Guérard-Hélaine , Vanessa Prévot , Véronique de Berardinis , Claude Forano et al.
ChemCatChem, 2015, 7, pp.3110-3115. ⟨10.1002/cctc.201500606⟩
Article dans une revue istex hal-01213630 v1

Genome Mining for Innovative Biocatalysts: New Dihydroxyacetone Aldolases for the Chemist’s Toolbox

Christine Guérard-Hélaine , Véronique de Berardinis , Marielle Besnard-Gonnet , Ekaterina Darii , Marine Debacker et al.
ChemCatChem, 2015, 7 (12), pp.1871-1879. ⟨10.1002/cctc.201500014⟩
Article dans une revue istex hal-02504106 v1

Straightforward Synthesis of Terminally Phosphorylated L-Sugars via Multienzymatic Cascade Reactions.

Virgil Hélaine , Rima Mahdi , G. V. Sudhir babu , Véronique de Berardinis , Roland Wohlgemuth et al.
Advanced Synthesis and Catalysis, 2015, 357, pp.1703-1708. ⟨10.1002/adsc.201500190⟩
Article dans une revue istex hal-01206488 v1
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Novel metabolic features in $Acinetobacter\ baylyi$ ADP1 revealed by a multiomics approach

Lucille Stuani , Christophe Lechaplais , Aaro Salminen , Béatrice Ségurens , Maxime Durot et al.
Metabolomics, 2014, 10 (6), pp.1223-1238. ⟨10.1007/s11306-014-0662-x⟩
Article dans une revue hal-04167345 v1

Large α-aminonitrilase activity screening of nitrilase superfamily members: Access to conversion and enantiospecificity by LC–MS

Franck Bordier , Mark Stam , Ekaterina Darii , Sabine Tricot , Aurélie Fossey et al.
Journal of Molecular Catalysis B: Enzymatic, 2014, 107, pp.79-88. ⟨10.1016/j.molcatb.2014.05.019⟩
Article dans une revue hal-02504052 v1

Revealing the hidden functional diversity of an enzyme family

Karine Bastard , Adam Alexander Thil Smith , Carine Vergne-Vaxelaire , Alain Perret , Anne Zaparucha et al.
Nature Chemical Biology, 2014, 10 (1), pp.42-49. ⟨10.1038/nchembio.1387⟩
Article dans une revue hal-02504067 v1
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Broadening the scope of Baeyer–Villiger monooxygenase activities toward α,β-unsaturated ketones: a promising route to chiral enol-lactones and ene-lactones

T. Reignier , Véronique de Berardinis , J.-L. Petit , A. Mariage , K. Hamzé et al.
Chemical Communications, 2014, 50 (58), pp.7793 - 7796. ⟨10.1039/c4cc02541e⟩
Article dans une revue hal-01500977 v1
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Synthesis of Mono- and Dihydroxylated Amino Acids with New $\alpha$-Ketoglutarate-Dependent Dioxygenases: Biocatalytic Oxidation of C$-$H Bonds

Damien Baud , Pierre-Loïc Saaidi , Adam Monfleur , Marine Harari , Julien Cuccaro et al.
ChemCatChem, 2014, 6, pp.3012 - 3017. ⟨10.1002/cctc.201402498⟩
Article dans une revue istex cea-01591870 v1

Nitrilase Activity Screening on Structurally Diverse Substrates: Providing Biocatalytic Tools for Organic Synthesis

Carine Vergne-Vaxelaire , Franck Bordier , Aurélie Fossey , Marielle Besnard-Gonnet , Adrien Debard et al.
Advanced Synthesis and Catalysis, 2013, 355 (9), pp.1763-1779. ⟨10.1002/adsc.201201098⟩
Article dans une revue istex hal-02503873 v1
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Evolution study of the Baeyer-Villiger monooxygenases enzyme family: functional importance of the highly conserved residues.

Joseph Rebehmed , Véronique Alphand , Véronique de Berardinis , Alexandre de Brevern
Biochimie, 2013, 95 (7), pp.1394-402. ⟨10.1016/j.biochi.2013.03.005⟩
Article dans une revue inserm-00926584 v1

Thermostable Transketolase from Geobacillus stearothermophilus: Characterization and Catalytic Properties

Juliane Abdoul-Zabar , Isabelle Sorel , Virgil Hélaine , Franck Charmantray , Titu Devamani et al.
Advanced Synthesis and Catalysis, 2013, 355, pp.116-128
Article dans une revue hal-00790248 v1

Structure and Biosynthesis of Fimsbactins A–F, Siderophores from Acinetobacter baumannii and Acinetobacter baylyi

Anna Proschak , Patrice Lubuta , Peter Grün , Frank Löhr , Gottfried Wilharm et al.
ChemBioChem, 2013, 14 (5), pp.633-638. ⟨10.1002/cbic.201200764⟩
Article dans une revue istex cea-04669768 v1

Microbial urate catabolism: characterization of HpyO, a non-homologous isofunctional isoform of the flavoprotein urate hydroxylase HpxO

Magalie Michiel , Nadia Perchat , Alain Perret , Sabine Tricot , Aude Papeil et al.
Environmental Microbiology Reports, 2012, pp.n/a-n/a. ⟨10.1111/j.1758-2229.2012.00390.x⟩
Article dans une revue istex hal-02503747 v1

FSAB: A new fructose-6-phosphate aldolase from Escherichia coli. Cloning, over-expression and comparative kinetic characterization with FSAA

Israel Sanchez-Moreno , Lionel Nauton , Vincent Théry , Agnès Pinet , Jean-Louis Petit et al.
Journal of Molecular Catalysis B: Enzymatic, 2012, 84, pp.9-14
Article dans une revue hal-00786230 v1

Acinetobacter baylyi ADP1 as a model for metabolic system biology

Véronique de Berardinis , Maxime Durot , Jean Weissenbach , Marcel Salanoubat
Current Opinion in Microbiology, 2009, 12 (5), pp.568-576. ⟨10.1016/j.mib.2009.07.005⟩
Article dans une revue istex hal-04581496 v1

New Insights into the Alternative d-Glucarate Degradation Pathway

Asadollah Aghaie , Christophe Lechaplais , Peggy Sirven , Sabine Tricot , Marielle Besnard-Gonnet et al.
Journal of Biological Chemistry, 2008, 283 (23), pp.15638-15646. ⟨10.1074/jbc.M800487200⟩
Article dans une revue hal-02503047 v1

A complete collection of single‐gene deletion mutants of Acinetobacter baylyi ADP1

Véronique de Berardinis , David Vallenet , Vanina Castelli , Marielle Besnard , Agnès Pinet et al.
Molecular Systems Biology, 2008, 4 (1), pp.174. ⟨10.1038/msb.2008.10⟩
Article dans une revue hal-02503013 v1

Iterative reconstruction of a global metabolic model of Acinetobacter baylyi ADP1 using high-throughput growth phenotype and gene essentiality data

Maxime Durot , François Le Fevre , Véronique de Berardinis , Annett Kreimeyer , David Vallenet et al.
BMC Systems Biology, 2008, 2 (1), pp.85. ⟨10.1186/1752-0509-2-85⟩
Article dans une revue hal-02503057 v1
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A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance

Marco Moroldo , Sophie Paillard , Raffaella Marconi , Fabrice Legeai , Aurélie Canaguier et al.
BMC Plant Biology, 2008, 8 (66), pp.1-14. ⟨10.1186/1471-2229-8-66⟩
Article dans une revue inria-00329169 v1

Genome duplication in the teleost fish Tretraodon nigroviridis reveals the early vertebrate proto-karyotype

Olivier Jaillon , Jean-Marc Aury , Frédéric Brunet , Jean-Louis Petit , Nicole Stange-Thomann et al.
Nature, 2004, 431 (7011), pp.946-957. ⟨10.1038/nature03025⟩
Article dans une revue hal-02681415 v1

The DNA sequence and analysis of human chromosome 14

Roland Heilig , Ralph Eckenberg , Jean-Louis Petit , Núria Fonknechten , Corinne da Silva et al.
Nature, 2003, 421 (6923), pp.601-607. ⟨10.1038/nature01348⟩
Article dans une revue hal-04312826 v1

Biocatalytic recycling cascades combining aldolases and transaminaseas for the stereo-controlled synthesis of γ-hydroxy-α-amino acids.

T. Gefflaut , L. Gourbeyre , J. Perrard , S. Bouzid , A. Mateos et al.
30ème Colloque du Club Biocatalyse en Synthèse Organique (CBSO), Oct 2024, Saint-Valery-sur-Somme, France
Communication dans un congrès hal-04789123 v1
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Réacteurs milli-structurés pour le scale-up de bioréacteurs en flux avec enzymes immobilisées en parois

Maïté Michaud , Chalore Teepakorn , Véronique de Berardinis , Anne Zaparucha , Guillaume Nonglaton et al.
Congrès de la SFGP 2024, Société française de génie des procédés, Oct 2024, Deauville, France
Communication dans un congrès cea-04887309 v1
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Milli-structured bioreactor with immobilized commercial nitrilase for continuous production of nicotinic acid

Maïté Michaud , Carine Vergne-Vaxelaire , Véronique de Berardinis , Anne Zaparucha , Guillaume Nonglaton et al.
EPIC 8 - 8th European Process Intensification Conference, May 2023, Varsovie, Poland
Communication dans un congrès cea-04431033 v1

Diverse Amine dehydrogenases for the biocatalytic synthesis of amines

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Ombeline Mayol , Raphael Meheust et al.
ENZYNOV'2, Oct 2023, Paris-Romainville, France
Communication dans un congrès hal-04327765 v1
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Immobilized nitrilase in continuous bioreactors: packed bed reactor vs. milli-structured pillar reactor

Maïté Michaud , Carine Vergne-Vaxelaire , Véronique de Berardinis , Anne Zaparucha , Guillaume Nonglaton et al.
ECCEECAB 2023 - 14th European Congress of Chemical Engineering and 7th European Congress of Applied Biotechnology, Sep 2023, Berlin, Germany
Communication dans un congrès cea-04431029 v1

Expanding the portfolio of enzymes for biocatalysis by extensive biodiversity screening

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Raphael Meheust , Mark Stam et al.
6e Symposium International de l'AFERP, Jul 2023, Orsay - Paris, France
Communication dans un congrès hal-04327790 v1

Expanding the portfolio of native Amine Dehydrogenases by extensive biodiversity screening

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Raphael Meheust , Mark Stam et al.
BioTrans 2023, Jun 2023, La Rochelle, France
Communication dans un congrès hal-04327737 v1
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Comparison of the biocatalytic performances of immobilized nitrilase in milli-scale reactors for continuous production of nicotinic acid

Maïté Michaud , Zoe Anxionnaz-Minvielle , Véronique de Berardinis , Guillaume Nonglaton , Anne Zaparucha et al.
BIOTRANS - 16th International Symposium on Biocatalysis & Biotransformations, Jun 2023, La Rochelle, France
Communication dans un congrès cea-04431030 v1

Study of new fructose-6-phosphate aldolases from extremophilic organisms.

L. Paulat , C. Guerard-Helaine , M. Lemaire , V. Helaine , L. Nauton et al.
CBSO 2022, 29ème Colloque du Club Biocatalyse et Bioconversions, Jun 2022, Visioconférence, France
Communication dans un congrès hal-04067587 v1

Expanding the portfolio of native Amine Dehydrogenases by extensive biodiversity screening

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Raphael Meheust , Mark Stam et al.
Amine BioCat 5.0, Nov 2022, Groningen, Netherlands
Communication dans un congrès hal-04328280 v1

De la biocatalyse à la catalyse hybride, les enzymes au cœur de procédés sélectifs et durables

Antoine Lancien , Léa Gourbeyre , Christine Guérard-Hélaine , Robert Wojcieszak , Rénato Froidevaux et al.
Les mardis de la Chimie Durable (SCF), Mar 2022, online, France
Communication dans un congrès hal-04158019 v1

Metagenomic expansion and active site analysis of the Amine Dehydrogenase family

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Mark Stam , Pelletier Eric et al.
International Congress on Biocatalysis 2022, Aug 2022, Hamburg, Germany
Communication dans un congrès hal-04360123 v1

Les outils Omics pour décrypter les voies de biodégradation des PHAs

Valérie Barbe , Adèle Wolinski , Justine Jacquin , Gabrielle Derippe , Léna Philip et al.
Troisième rencontre du GDR Polymères et Océans, GDRPO, 2022, Brest, France
Communication dans un congrès hal-04331683 v1

Continuous colorimetric screening assays to explore both acceptor and donor substrates of amine-Transaminases.

L. Gourbeyre , E. Heuson , F. Charmantray , L. Pollegioni , V. De Berardinis et al.
International Symposium on high-throughput catalyst design – HTCD 2021, Jun 2021, Lille, France
Communication dans un congrès hal-03560390 v1

Ketones as electrophile substrate for aldolases: towards the stereoselective synthesis of tertiary alcohols.

C. Guerard-Helaine , M. Lemaire , V. Helaine , J-L. Petit , V. De Berardinis
28ème Colloque du Club Biocatalyse en Synthèse Organique (CBSO), Sep 2021, Lège-Cap Ferret, France
Communication dans un congrès hal-03574406 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using innovative in silico approaches

Eddy Elisée , Raphael Meheust , Laurine Ducrot , Mark Stam , Eric Pelletier et al.
International Symposium on High-Throughput Catalyst Design, Jun 2021, Lille (Virtual), France
Communication dans un congrès hal-04328578 v1

Large scale exploration of the biocatalytic capability of biodiversity for biocatalysis & synthetic biology applications

Véronique de Berardinis , Jean-Louis Petit , Carine Vergne-Vaxelaire , David Vallenet , Anne Zaparucha
First International symposium on High-Throughput Catalysts Design, Jun 2021, Virtual conference (Lille), France
Communication dans un congrès hal-04315412 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using sequence and structure-based approaches

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
29th Conference on Intelligent Systems for Molecular Biology (ISMB) - 20th European Conference on Computational Biology (ECCB), Jul 2021, Virtual conference, United States
Communication dans un congrès hal-04359840 v1

An overview of the native amine dehydrogenase family : discovery, structural and genomic exploration, protein engineering and biocatalytic applications

Carine Vergne-Vaxelaire , Laurine Ducrot , Megan Bennett , Eddy Elisée , Karine Bastard et al.
28e colloque du Club de Biocatalyse en Synthèse Organique, Arkema; Proteus; CBSO, Sep 2021, Lège Cap-Ferret, France
Communication dans un congrès hal-04328296 v1

Metagenomic mining for Amine Dehydrogenase discovery

Carine Vergne-Vaxelaire , Adam Caparco , Eric Pelletier , Jean-Louis Petit , Aurélie Fossey-Jouenne et al.
Amine Biocatalysis 4.0, Feb 2020, Stuttgart, Germany
Communication dans un congrès hal-04327878 v1

Exploring biodiversity for biocatalyst discovery: applications to synthetic chemistry and synthetic biology

Véronique de Berardinis , Anne Zaparucha , David Vallenet , Carine Vergne , Jean-Louis Petit et al.
GMGM Open Scientific day & IPCB Inauguration, May 2019, Strabourg, France
Communication dans un congrès hal-04315453 v1

Aldolases in sustainable processes: exploration of their nucleophile and electrophile substrate promiscuity

Marielle Lemaire , Christine Hélaine , Virgil Hélaine , Véronique de Berardinis , Marcel Salanoubat
the Multistep Enzyme Catalyzed Processes Congress (MECP18), Mar 2018, Trondheim, Norway
Communication dans un congrès hal-04351819 v1

A family of Native Amine Dehydrogenases for the Asymmetric Reductive Amination of Ketones

Carine Vergne-Vaxelaire , Ombeline Mayol , Karine Bastard , Lilian Beloti , Amina Frese et al.
Novel Enzymes 2018, Technische Universitat Darmstadt, Oct 2018, Damstadt, Germany
Communication dans un congrès hal-04328306 v1

Exploration of Acinetobacter baylyi ADP1 sulfur metabolism

Véronique de Berardinis , Alain Perret , Karine Bastard , David Vallenet , Jean-Louis Petit et al.
MicroScope Open Days (MOD), Laboratory of Bioinformatics Analyses for Genomics and Metabolism, May 2018, Paris, France
Communication dans un congrès hal-04315489 v1

Aldolases and transaminases for amino alcohols synthesis

Thierry Gefflaut , Christine Guérard-Hélaine , Egon Heuson , Franck Charmantray , Virgil Hélaine et al.
27ÈME colloque du CBSO, Le Club Biocatalyse en Synthèse Organique, May 2018, Guidel, France
Communication dans un congrès hal-04351825 v1

Large-scale exploration of aldolase biodiversity to discover novel biocatalysts: what’s new?

Véronique de Berardinis , Christine Guérard-Hélaine , Thierry Gefflaut , Ekaterina Darii , Marcel Salanoubat et al.
27ÈME colloque du CBSO, Le Club Biocatalyse en Synthèse Organique, May 2018, Guidel, France
Communication dans un congrès cea-04345880 v1

Enzymatic cascade synthesis of chiral building-blocks from L-lysine

Anne Zaparucha , Raphael Dubois , Olivier Peruch , Damien Baud , Pierre-Loic Saaidi et al.
Multiple Enzyme Cascade Processes Congress, Mar 2018, Trondheim ( Norvège), Norway
Communication dans un congrès hal-04303639 v1

Enzymatic cascades for the synthesis of amino alcohols

Anne Zaparucha , Damien Baud , Olivier Peruch , Pierre-Loic Saaidi , Aurélie Fossey et al.
BIOTRANS, Jul 2017, Budapest (Hungary), Hungary
Communication dans un congrès hal-04303631 v1

Nouvelle dioxygénases alpha-cetoglutarate dépendantes pour la synthèse de plateformes chirales

Anne Zaparucha , Damien Baud , Pierre-Loic Saaidi , Marine Harari , Julien Cuccaro et al.
CBSO, Jun 2014, Carry Le Rouet, France
Communication dans un congrès hal-04303652 v1

Large nitrilase activity screening on structurally diverse substrates: providing new biocatalytic tools for organic synthesis

Anne Zaparucha , Carine Vergne-Vaxelaire , Franck Bordier , Ekaterina Darii , Aurélie Fossey et al.
BIOTRANS, Jul 2013, Manchester (UK), United Kingdom
Communication dans un congrès hal-04303622 v1

Physical mapping and re-sequencing of a set of resistance related genes in grapevine

Marco Moroldo , Sophie Paillard , R. Marconi , Fabrice Legeai , Aurelie Canaguier et al.
17. Conference Plant and Animal Genomes, Labo/service de l'auteur, Ville service, Pays service., Jan 2009, San Diego, United States. 1 p
Communication dans un congrès hal-01462667 v1
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Efficacité énergétique des bioprocédés - Etude du couplage entre l'immobilisation de biocatalyseurs et la structuration de milli réacteurs pour la synthèse enzymatique en flux continu

Adama Drabo , Zoé Anxionnaz-Minvielle , Guillaume Nonglaton , Maïté Michaud , Véronique de Berardinis et al.
Séminaire CODEGEPRA, Nov 2024, Lyon, France. , 2024
Poster de conférence cea-04887307 v1

Biodegradation of elastomers by new, overexpressed enzymes from biodiversity.

O. Hammouti , V. Helaine , L. Malosse , V. Lafaquiere , T. Gefflaut et al.
30ème Colloque du Club Biocatalyse en Synthèse Organique (CBSO), Oct 2024, Saint-Valery-sur-Somme, France
Poster de conférence hal-04790269 v1

Recycling cascades combining aldolases and transaminases for the highly selective synthesis of hydroxylated amino acids.

T. Gefflaut , L. Gourbeyre , J. Perrard , V. Helaine , C. Guerard-Helaine et al.
15ème Symposium International "Biocatalyse et Biotransformation" Biotrans 2023, Jun 2023, La Rochelle, France
Poster de conférence hal-04563762 v1

Study of two new DHA aldolases from acidophilic organisms.

L. Paulat , C. Gastaldi , V. Helaine , L. Nauton , J.-L. Petit et al.
15ème Symposium International "Biocatalyse et Biotransformation" Biotrans 2023, Jun 2023, La Rochelle, France
Poster de conférence hal-04563723 v1

Metagenomic expansion and active site analysis of the Amine Dehydrogenase family

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Mark Stam , Pelletier Eric et al.
International Congress on Biocatalysis 2022, Aug 2022, Hamburg, Germany
Poster de conférence hal-04360138 v1

New Advances in DERA Substrate Specificity.

V. Helaine , M. Lemaire , M. Salanoubat , V. De Berardinis , C. Guerard-Helaine
15th International Symposium on Biocatalysis and Biotransformations Biotrans 2021, Webinar, Jul 2021, Graz, Austria
Poster de conférence hal-03579568 v1

Substrate specificity exploration of the ThDP-dependent transferase SucA.

M. Lemaire , A. Afonso , W. Dai , C. Guerard-Helaine , V. Helaine et al.
28ème Colloque du Club Biocatalyse en Synthèse Organique (CBSO), Sep 2021, Lège-Cap Ferret, France
Poster de conférence hal-03580610 v1

Genome mining for expanding pyruvate aldolases scope.

C. Guerard-Helaine , V. Helaine , V. De Berardinis , M. Salanoubat , M. Lemaire
15th International Symposium on Biocatalysis and Biotransformations Biotrans 2021, Webinar, Jul 2021, Graz, Germany
Poster de conférence hal-03579554 v1

Substrate specificity exploration of the ThDP-dependent transferase SucA.

M. Lemaire , A. Afonso , W. Dai , C. Guerard-Helaine , V. Helaine et al.
15th International Symposium on Biocatalysis and Biotransformations Biotrans 2021, Webinar, Jul 2021, Graz, Austria
Poster de conférence hal-03579618 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using sequence and structure-based approaches

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
29th Conference on Intelligent Systems for Molecular Biology (ISMB) - 20th European Conference on Computational Biology (ECCB), Jul 2021, Virtual conference, United States
Poster de conférence hal-04359878 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using sequence and structure-based approaches

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
BioTrans 2021, Jul 2021, Graz (Virtual Conference), Austria
Poster de conférence hal-04360034 v1

Continuous colorimetric screening assays to explore both acceptor and donor substrates of amine-Transaminases.

L. Gourbeyre , E. Heuson , F. Charmantray , L. Pollegioni , V. De Berardinis et al.
15th International Symposium on Biocatalysis and Biotransformations Biotrans 2021, Jul 2021, Graz, Germany
Poster de conférence hal-03579564 v1

Aldolase cascade reactions for dicarbonylated monosaccharide syntheses: highlight on quadruple acetaldehyde addition catalyzed by DERA

Christine Guérard-Hélaine , Victor Laurent , Virgil Hélaine , Marielle Lemaire , Jean-Louis Petit et al.
14th Biotrans symposium, Jul 2019, Groningen, Netherlands
Poster de conférence hal-04354471 v1

Smart ATP regeneration system for chemoenzymatic amide bond formation

Chloé M. Lelièvre , Mélanie Balandras , Adrien Debard , Virginie Pellouin , Jean-Louis Petit et al.
14th Biotrans symposium, Jul 2019, Groningen, Netherlands
Poster de conférence hal-04354478 v1

A continuous colorimetric screening assay for amine-transaminases

Léa Gourbeyre , Egon Heuson , Franck Charmantray , Véronique de Berardinis , Jean-Louis Petit et al.
14th Biotrans symposium, Jul 2019, Groningen, Netherlands
Poster de conférence hal-04354463 v1

Aldolases from biodiversity: exploration of their substrates promiscuity

Marielle Lemaire , Victor Laurent , Christine Guérard-Hélaine , Virgil Hélaine , Marcel Salanoubat et al.
14th Biotrans symposium, Jul 2019, Groningen, Netherlands
Poster de conférence hal-04354484 v1

Auto-sufficient enzymatic cascade combining a non selective and promiscuous ADH and BVMOS: Application for dihydrocoumarin synthesis

Sidiky Ménil , Thomas Reignier , Katia Duquesne , Jean-Louis Petit , Aline Mariage et al.
th Multistep Enzyme Catalyzed Processes Congress (MECP18), Mar 2018, Trondheim, Norway
Poster de conférence hal-04322319 v1

Characterization of L­-Serine O-succinyltransferases involved in l-cysteine biosynthesis in prokaryotes

Thomas Bessonnet , Aline Mariage , Pascal Bazire , Jean-Louis Petit , Ekaterina Darii et al.
43rd FEBS Congress, Jul 2018, Prague, Czech Republic
Poster de conférence cea-04345886 v1

tertiary Alcohol Formation Catalysed by a Rhamnulose-1-PhosphateAldolase : Dendroketose-1-Phosphate Synthesis

Victor Laurent , Virgil Hélaine , Marielle Lemaire , Marcel Salanoubat , Véronique de Berardinis et al.
John Whittal, Peter W Sutton. Applied Biocatalysis: The Chemist’s Enzyme Toolbox, Wiley, pp.241-247, 2020, 978-1-119-48701-2
Chapitre d'ouvrage hal-03033832 v1

Continuous High-Throughput Colorimetric Assays for α-Transaminases

Egon Heuson , Jean-Louis Petit , Franck Charmantray , Véronique de Bérardinis , Thierry Gefflaut
Protein Engineering, 1685, Springer New York, pp.233-245, 2018, Methods in Molecular Biology, ⟨10.1007/978-1-4939-7366-8_13⟩
Chapitre d'ouvrage cea-04425242 v1

Chapter 1. Genome Mining for Enzyme Discovery

Anne Zaparucha , Véronique de Berardinis , Carine Vaxelaire-Vergne
Modern Biocatalysis, Royal Society of Chemistry, pp.1-27, 2018, Catalysis Series, ⟨10.1039/9781788010450-00001⟩
Chapitre d'ouvrage hal-04150687 v1
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Continuous high-throughput colorimetric Assays for alpha-transaminases.

Egon Heuson , Jean-Louis Petit , Franck Charmantray , Véronique de Berardinis , Thierry Gefflaut
Uwe T. Bornscheuer; Matthias Höhne. Methods in Molecular Biology, 1685, Humana Press, pp.233-245, 2017, Protein Engineering
Chapitre d'ouvrage hal-01789998 v1