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A ranking tool for "category killer" microbial biobanks
Martin Boutroux
,
Adriana Chiarelli
,
Mariana L Ferrari
,
Olivier Chesneau
,
D. Clermont
et al.
Article dans une revue
pasteur-04862042
v1
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Clarification on the implementation of the Nagoya Protocol in France for the access and sharing of benefits arising from the utilization of microbial genetic resources
Mariana Ferrari
,
Olivier Chesneau
,
Dominique Clermont
,
Praveen Rahi
,
Michel-Yves Mistou
et al.
Article dans une revue
hal-04684659
v1
|
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Paenibacillus plantiphilus sp. nov. from the plant environment of Zea mays
Peter Kämpfer
,
André Lipski
,
Lucie Lamothe
,
D. Clermont
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-04135943
v1
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HIV-1 treatment timing shapes the human intestinal memory B-cell repertoire to commensal bacteria
Cyril Planchais
,
Luis M Molinos-Albert
,
Pierre Rosenbaum
,
Thierry Hieu
,
Alexia Kanyavuz
et al.
Article dans une revue
hal-04248132
v1
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Genome sequence-based identification of Enterobacter strains and description of Enterobacter pasteurii sp. nov.
Praveen Rahi
,
Estelle Mühle
,
Cyril Scandola
,
Gerald Touak
,
Dominique Clermont
Article dans une revue
(data paper)
pasteur-04387589
v1
|
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Chryseobacterium oryctis sp. nov., isolated from the gut of the beetle Oryctes rhinoceros, and Chryseobacterium kimseyorum sp. nov., isolated from a stick insect rearing cage
Matan Shelomi
,
Chiao-Jung Han
,
Wen-Ming Chen
,
Hsin-Kuang Chen
,
Shwu-Jen Liaw
et al.
Article dans une revue
pasteur-04110138
v1
|
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Paenibacillus auburnensis sp. nov. and Paenibacillus pseudetheri sp. nov., isolated from the rhizosphere of Zea mays
Peter Kämpfer
,
André Lipski
,
John A Mcinroy
,
D. Clermont
,
Lucie Lamothe
et al.
Article dans une revue
pasteur-04110096
v1
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Serratia silvae sp. nov., Isolated from Forest Soil
Gyu-Sung Cho
,
Estelle Mühle
,
Dominique Clermont
,
Charles Franz
,
Ludovic Besaury
Article dans une revue
hal-04087205
v1
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Streptomyces durocortorensis sp. nov., isolated from oak rhizosphere
Mathieu Cassarini
,
Caroline Rémond
,
Estelle Mühle
,
Dominique Clermont
,
Ludovic Besaury
Article dans une revue
pasteur-03791331
v1
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Sutcliffiella rhizosphaerae sp. nov. isolated from roots
Peter Kämpfer
,
Stefanie P Glaeser
,
André Lipski
,
John A Mcinroy
,
D. Clermont
et al.
Article dans une revue
(data paper)
pasteur-04109954
v1
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Pseudoneobacillus rhizosphaerae gen. nov., sp. nov., isolated from maize root rhizosphere
Peter Kämpfer
,
Stefanie Glaeser
,
Hans-Jürgen Busse
,
John Mcinroy
,
Dominique Clermont
et al.
Article dans une revue
pasteur-03791340
v1
|
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Neobacillus rhizosphaerae sp. nov., isolated from the rhizosphere, and reclassification of Bacillus dielmonensis as Neobacillus dielmonensis comb. nov.
Peter Kämpfer
,
Stefanie P Glaeser
,
John A Mcinroy
,
D. Clermont
,
André Lipski
et al.
Article dans une revue
pasteur-04110077
v1
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Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing
Iman Yassine
,
Sophie Lefèvre
,
Elisabeth E. Hansen
,
Corinne Ruckly
,
Isabelle Carle
et al.
Article dans une revue
pasteur-03694335
v1
|
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Paenibacillus allorhizoplanae sp. nov. from the rhizoplane of a Zea mays root
Peter Kämpfer
,
André Lipski
,
Lucie Lamothe
,
Dominique Clermont
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-03791319
v1
|
|
Bacillus rhizoplanae sp. nov. from maize roots
Peter Kämpfer
,
André Lipski
,
John Mcinroy
,
Dominique Clermont
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-03791337
v1
|
|
Devosia equisanguinis sp. nov., isolated from horse blood
Peter Kämpfer
,
Hans-Jürgen Busse
,
Dominique Clermont
,
Alexis Criscuolo
,
Stefanie Glaeser
Article dans une revue
pasteur-03791350
v1
|
|
Streptomyces silvae sp. nov., isolated from forest soil
Ludovic Besaury
,
Lucas Martinet
,
Estelle Mühle
,
Dominique Clermont
,
Caroline Rémond
Article dans une revue
pasteur-03791359
v1
|
|
Reclassification of Haloactinobacterium glacieicola as Occultella glacieicola gen. nov., comb. nov., of Haloactinobacterium album as Ruania alba comb. nov, with an emended description of the genus Ruania, recognition that the genus names Haloactinobacterium and Ruania are heterotypic synonyms and description of Occultella aeris sp. nov., a halotolerant isolate from surface soil sampled at an ancient copper smelter
Peter Schumann
,
Franziska Kalensee
,
Jialan Cao
,
Alexis Criscuolo
,
Dominique Clermont
et al.
Article dans une revue
pasteur-03259751
v1
|
|
Pseudomonas carbonaria sp. nov., isolated from charcoal
Peter Kämpfer
,
S. Glaeser
,
John Mcinroy
,
Dominique Clermont
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-03259701
v1
|
|
Paenibacillus allorhizosphaerae sp. nov., from soil of the rhizosphere of Zea mays
Peter Kämpfer
,
Hans-Jürgen Busse
,
John Mcinroy
,
Dominique Clermont
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-03791388
v1
|
|
Flavobacterium bizetiae sp. nov., isolated from diseased freshwater fish in Canada at the end of the 1970s
Estelle Mühle
,
Chloé Abry
,
Priscilla Leclerc
,
Gogoa-Marthe Goly
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-03082360
v1
|
|
Leucobacter soli sp. nov., from soil amended with humic acid
Peter Kämpfer
,
John Mcinroy
,
Dominique Clermont
,
Meina Neumann-Schaal
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-03791356
v1
|
|
Arthrobacter ulcerisalmonis sp. nov., isolated from an ulcer of a farmed Atlantic salmon (Salmo salar), and emended description of the genus Arthrobacter sensu lato
Peter Kämpfer
,
Hans-Jürgen Busse
,
Peter Schumann
,
Alexis Criscuolo
,
Dominique Clermont
et al.
Article dans une revue
pasteur-03259785
v1
|
|
Yersinia artesiana sp. nov., Yersinia proxima sp. nov., Yersinia alsatica sp. nov., Yersinia vastinensis sp. nov., Yersinia thracica sp. nov. and Yersinia occitanica sp. nov., isolated from humans and animals
Anne-Sophie Le Guern
,
Cyril Savin
,
Hilde Angermeier
,
Sylvie Brémont
,
Dominique Clermont
et al.
Article dans une revue
pasteur-02936765
v1
|
|
Flavobacterium salmonis sp. nov. isolated from Atlantic salmon (Salmo salar) and formal proposal to reclassify Flavobacterium spartansii as a later heterotypic synonym of Flavobacterium tructae
Peter Kämpfer
,
Rute Irgang
,
Stefanie P. Glaeser
,
Hans-Jürgen Busse
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-02975458
v1
|
|
Flavobacterium panici sp. nov. isolated from the rhizosphere of the switchgrass Panicum virgatum
Peter Kämpfer
,
S. Glaeser
,
John Mcinroy
,
Jia Xu
,
Hans-Jürgen Busse
et al.
International Journal of Systematic and Evolutionary Microbiology, 2020, 70 (11), pp.5824-5831. ⟨10.1099/ijsem.0.004482⟩
Article dans une revue
pasteur-03259727
v1
|
|
Serratia vespertilionis (García-Fraile et al. 2015) is a later heterotypic synonym of Serratia ficaria (Grimont et al. 1981)
Paula García-Fraile
,
Cathrin Spröer
,
Olivier Chesneau
,
Alexis Criscuolo
,
Elke Lang
et al.
Article dans une revue
pasteur-03082408
v1
|
|
Halomonas lysinitropha sp. nov., a novel halophilic bacterium isolated from a hypersaline wetland
Mohaddaseh Ramezani
,
Mohammad Pourmohyadini
,
Mahdi Moshtaghi Nikou
,
Somaye Makzum
,
Peter Schumann
et al.
International Journal of Systematic and Evolutionary Microbiology, 2020, 70 (12), pp.6098-6105. ⟨10.1099/ijsem.0.004504⟩
Article dans une revue
pasteur-03259720
v1
|
|
Optimization of a Top-Down Proteomics Platform for Closely Related Pathogenic Bacterial Discrimination
Mathieu Dupré
,
Magalie Duchateau
,
Christian Malosse
,
Diogo Borges-Lima
,
Valeria Calvaresi
et al.
Article dans une revue
pasteur-03014101
v1
|
|
DNAshell Protects DNA Stored at Room Temperature for Downstream Next-Generation Sequencing Studies
Kevin Washetine
,
Simon Heeke
,
Camille Ribeyre
,
Camille Bourreau
,
Corinne Normand
et al.
Article dans une revue
hal-02087894
v1
|
|
Pigmentiphaga humi sp. nov., isolated from soil amended with humic acid
Peter Kämpfer
,
Hans-Jürgen Busse
,
Alexis Criscuolo
,
Chantal Bizet
,
Dominique Clermont
et al.
Article dans une revue
pasteur-03259872
v1
|
|
Jeotgalicoccus meleagridis sp. nov. isolated from bioaerosol from emissions of a turkey fattening plant and reclassification of Jeotgalicoccus halophilus Liu et al. 2011 as a later heterotypic synonym of Jeotgalicoccus aerolatus Martin et al. 2011
Peter Kämpfer
,
Hans-Jürgen Busse
,
Stefanie P Glaeser
,
Dominique Clermont
,
Alexis Criscuolo
et al.
Article dans une revue
pasteur-03253795
v1
|
|
Revising the taxonomy of the Acinetobacter lwoffii group: The description of Acinetobacter pseudolwoffii sp. nov. and emended description of Acinetobacter lwoffii
Alexandr Nemec
,
Lenka Radolfová-Křížová
,
Martina Maixnerová
,
Matěj Nemec
,
Dominique Clermont
et al.
Article dans une revue
pasteur-03259897
v1
|
|
Xinfangfangia humi sp. nov., isolated from soil amended with humic acid
Peter Kämpfer
,
Hans-Jürgen Busse
,
John A. Mcinroy
,
Alexis Criscuolo
,
Dominique Clermont
et al.
Article dans une revue
pasteur-03259867
v1
|
|
The use of genomic DNA sequences as type material for valid publication of bacterial species names will have severe implications for clinical microbiology and related disciplines
Magne Bisgaard
,
Henrik Christensen
,
Dominique Clermont
,
Lenie Dijkshoorn
,
J Michael Janda
et al.
Article dans une revue
pasteur-03259883
v1
|
|
Paracoccus haematequi sp. nov., isolated from horse blood
Peter Kämpfer
,
Hans-Jürgen Busse
,
Harald Galatis
,
Alexis Criscuolo
,
Dominique Clermont
et al.
Article dans une revue
pasteur-03259877
v1
|
|
Filibacter tadaridae sp. nov., isolated from within a guano pile from a colony of Mexican free-tailed bats Tadarida brasiliensis
Peter Kämpfer
,
Chantal Bizet
,
Dominique Clermont
,
Alexis Criscuolo
,
Laura Kloepper
et al.
Article dans une revue
pasteur-03259887
v1
|
|
Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Genomovar III Strain PH-97028 (=CIP 109753)
Alexis Criscuolo
,
Olivier Chesneau
,
Dominique Clermont
,
Chantal Bizet
Article dans une revue
pasteur-03082421
v1
|
|
Psychrobacter Pasteurii and Psychrobacter Piechaudii Sp. Nov., Two Novel Species Within the Genus Psychrobacter
Raquel Hurtado-Ortiz
,
Anissa Nazimoudine
,
Alexis Criscuolo
,
Perrine Hugon
,
Damien Mornico
et al.
Article dans une revue
pasteur-02612610
v1
|
|
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain
Amandine Perrin
,
Elise Larsonneur
,
Ainsley Nicholson
,
David Edwards
,
Kristin Gundlach
et al.
Article dans une revue
hal-02613118
v1
|
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Manual and expert annotation of the nearly complete genome sequence of Staphylococcus sciuri strain ATCC 29059: a reference for the oxidase-positive staphylococci that supports the atypical phenotypic features of the species group
Eugene Christo-Foroux
,
Tatiana Vallaeys
,
Valentin Loux
,
Elie Dassa
,
Josef Deutscher
et al.
Article dans une revue
hal-01604275
v1
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|
Synthesis and evaluation of original bioisosteres of bacterial type IIA topoisomerases inhibitors
Stéphanie Petrella
,
Alexandra Aubry
,
Geneviève Janvier
,
Eloi P. Coutant
,
Alex Cartier
et al.
Article dans une revue
pasteur-01386561
v1
|
|
Global phylogeography and evolutionary history of Shigella dysenteriae type 1.
Elisabeth Njamkepo
,
Nizar Fawal
,
Alicia Tran-Dien
,
Jane Hawkey
,
Nancy Strockbine
et al.
Article dans une revue
pasteur-01422023
v1
|
|
Paenibacillus faecis sp. nov., isolated from human faeces
Dominique Clermont
,
Maite Gomard
,
Sylviane Hamon
,
Isabelle Bonne
,
José-Carlos Fernandez
et al.
International Journal of Systematic and Evolutionary Microbiology, 2015, 65 (12), pp.4621-4626. ⟨10.1099/ijsem.0.000622⟩
Article dans une revue
pasteur-02445699
v1
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|
Streptococcus agalactiae clones infecting humans were selected and fixed through the extensive use of tetracycline
Violette Da Cunha
,
Mark R. Davies
,
Pierre-Emmanuel Douarre
,
Isabelle Rosinski-Chupin
,
Immaculada Margarit
et al.
Article dans une revue
pasteur-01299769
v1
|
|
Assessment of DNA encapsulation, a new room-temperature DNA storage method
Dominique Clermont
,
Sylvain Santoni
,
Safa Saker
,
Maite Gomard
,
Eliane Gardais
et al.
Article dans une revue
hal-01268667
v1
|
|
The genomic diversification of the whole Acinetobacter genus: origins, mechanisms, and consequences.
Marie Touchon
,
Jean Cury
,
Eun-Jeong Yoon
,
Lenka Krizova
,
Gustavo C Cerqueira
et al.
Article dans une revue
pasteur-01132634
v1
|
|
Identification of 50 Class D β-Lactamases and 65 Acinetobacter-Derived Cephalosporinases in Acinetobacter spp.
Bruno Périchon
,
Sylvie Goussard
,
Violaine Walewski
,
Lenka Krizova
,
Gustavo Cerqueira
et al.
Article dans une revue
pasteur-03262680
v1
|
|
Draft genome sequences of five strains of [i]Lactobacillus acidophilus[/i] , strain CIP 76.13 T , isolated from humans, strains CIRM-BIA 442 and CIRM-BIA 445, isolated from dairy products, and strains DSM 20242 and DSM 9126 of unknown origin
Hélène Falentin
,
Sylvie Cousin
,
Dominique Clermont
,
Sophie Creno
,
Florence Ma
et al.
Article dans une revue
hal-01209470
v1
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|
Draft genome sequence of Lactobacillus hominis strain CRBIP 24.179τ, isolated from human intestine
Sylvie Cousin
,
Sophie Creno
,
Laurence Ma
,
Dominique Clermont
,
Valentin Loux
et al.
Article dans une revue
hal-00939673
v1
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|
The intestinal microbiota modulates the anticancer immune effects of cyclophosphamide
Sophie Viaud
,
Fabiana Saccheri
,
Gregoire Mignot
,
Takahiro Yamazaki
,
Romain Daillere
et al.
Article dans une revue
hal-01204279
v1
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|
Draft genome sequences of Lactobacillus equicursoris CIP 110162τ and Lactobacillus sp. strain CRBIP 24.137, isolated from thoroughbred racehorse feces and human urine, respectively
Sylvie Cousin
,
Valentin Loux
,
Laurence Ma
,
Sophie Creno
,
Dominique Clermont
et al.
Article dans une revue
hal-02645656
v1
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|
Draft Genome Sequence of [i][/i] Lactobacillus pasteurii[i][/i] CRBIP 24.76T.
Sylvie Cousin
,
Dominique Clermont
,
Sophie Creno
,
Laurence Ma
,
Valentin Loux
et al.
Article dans une revue
hal-01190531
v1
|
|
Listeria rocourtiae sp. nov.
Alexandre Leclercq
,
D. Clermont
,
Chantal Bizet
,
Patrick a D Grimont
,
Anne Le Fleche-Mateos
et al.
Article dans une revue
pasteur-04823337
v1
|
|
Listeria rocourtiae sp. nov
A Leclercq
,
D Clermont
,
Chantal Bizet
,
Pa Grimont
,
A Le Fleche-Mateos
et al.
International Journal of Systematic and Evolutionary Microbiology, 2010, pp.Inconnu
Article dans une revue
hal-02663151
v1
|
|
Pseudomonas brassicacearum subsp. neoaurantiaca subsp. nov., orange-pigmented bacteria isolated from soil and the rhizosphere of agricultural plants.
Elena P Ivanova
,
Richard Christen
,
Chantal Bizet
,
Dominique Clermont
,
Laurence Motreff
et al.
International Journal of Systematic and Evolutionary Microbiology, 2009, 59 (Pt 10), pp.2476-81. ⟨10.1099/ijs.0.009654-0⟩
Article dans une revue
hal-00484170
v1
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|
Identification of Strains of <i>Alcaligenes</i> and <i>Agrobacterium</i> by a Polyphasic Approach
Dominique Clermont
,
Christine Harmant
,
Chantal Bizet
Article dans une revue
pasteur-03682046
v1
|
|
New tetracycline resistance determinants coding for ribosomal protection in streptococci and nucleotide sequence of tet(T) isolated from Streptococcus pyogenes A498.
D. Clermont
,
Olivier Chesneau
,
G de Cespédès
,
T Horaud
Article dans une revue
pasteur-03082487
v1
|