|
Domestic Environment and Gut Microbiota: Lessons from Pet Dogs
Juan Hernandez
,
Soufien Rhimi
,
Aicha Kriaa
,
Vincent Mariaule
,
Houda Boudaya
et al.
Journal articles
hal-03811748v1
|
|
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Aicha Kriaa
,
Vincent Mariaule
,
Amin Jablaoui
,
Soufien Rhimi
,
Hela Mkaouar
et al.
Journal articles
hal-03812120v1
|
|
Development of Microbiome Biobanks -Challenges and Opportunities
M.J. Ryan
,
M. Schloter
,
G. Berg
,
T. Kostic
,
L.L. Kinkel
et al.
Journal articles
hal-03824619v1
|
|
Multiple Selection Criteria for Probiotic Strains with High Potential for Obesity Management
Jeanne Alard
,
Benoit Cudennec
,
Denise Boutillier
,
Véronique Peucelle
,
Amandine Descat
et al.
Journal articles
hal-03447633v1
|
|
Bile Salt Hydrolases: At the Crossroads of Microbiota and Human Health
Mélanie Bourgin
,
Aicha Kriaa
,
Héla Mkaouar
,
Vincent Mariaule
,
Amin Jablaoui
et al.
Journal articles
hal-03371108v1
|
|
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Bernardo Cuffaro
,
Aka Assohoun
,
Denise Boutillier
,
Véronique Peucelle
,
Jérémy Desramaut
et al.
Journal articles
hal-03371110v1
|
|
Tolerogenic Dendritic Cells Shape a Transmissible Gut Microbiota that Protects from Metabolic Diseases
Emelyne Lécuyer
,
Tiphaine Le Roy
,
Aurélie Gestin
,
Amélie Lacombe
,
Catherine Philippe
et al.
Journal articles
hal-03252103v1
|
|
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Héla Mkaouar
,
Vincent Mariaule
,
Soufien Rhimi
,
Juan Hernandez
,
Aicha Kriaa
et al.
Journal articles
hal-03372010v1
|
|
Microbiome innovations for a sustainable future
Kathleen D’hondt
,
Tanja Kostic
,
Richard Mcdowell
,
Francois Eudes
,
Brajesh Singh
et al.
Journal articles
hal-03372011v1
|
|
SP-1, a Serine Protease from the Gut Microbiota, Influences Colitis and Drives Intestinal Dysbiosis in Mice
Aicha Kriaa
,
Amin Jablaoui
,
Soufien Rhimi
,
Souha Soussou
,
Héla Mkaouar
et al.
Journal articles
hal-03814093v1
|
|
Digestive Inflammation: Role of Proteolytic Dysregulation
Vincent Mariaule
,
Aicha Kriaa
,
Souha Soussou
,
Soufien Rhimi
,
Houda Boudaya
et al.
Journal articles
hal-03371106v1
|
|
In Vitro Characterization of Gut Microbiota-Derived Commensal Strains: Selection of Parabacteroides distasonis Strains Alleviating TNBS-Induced Colitis in Mice
Bernardo Cuffaro
,
Aka L. W. Assohoun
,
Denise Boutillier
,
Lenka Súkeníková
,
Jérémy Desramaut
et al.
Journal articles
hal-03332194v1
|
|
Fat‐Shaped microbiota affects lipid metabolism, Liver Steatosis, and intestinal homeostasis in mice fed a low‐protein diet
Marco Busnelli
,
Stefano Manzini
,
Amin Jablaoui
,
Aurelia Bruneau
,
Aicha Kriaa
et al.
Journal articles
hal-02927462v1
|
|
Mucosal-associated invariant T cells promote inflammation and intestinal dysbiosis leading to metabolic dysfunction during obesity
Amine Toubal
,
Badr Kiaf
,
Lucie Beaudoin
,
Lucie Cagninacci
,
Moez Rhimi
et al.
Journal articles
inserm-02948958v1
|
|
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Aicha Kriaa
,
Amin Jablaoui
,
Héla Mkaouar
,
Nizar Akermi
,
Emmanuelle Maguin
et al.
Journal articles
hal-03372024v1
|
|
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Amin Jablaoui
,
Aicha Kriaa
,
Héla Mkaouar
,
Nizar Akermi
,
Souha Soussou
et al.
Journal articles
hal-03372023v1
|
|
A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment
Junhua Li
,
Huanzi Zhong
,
Yuliaxis Y. Ramayo-Caldas
,
Nicolas Terrapon
,
Vincent Lombard
et al.
Journal articles
hal-02860679v1
|
|
Exploring the Bacterial Impact on Cholesterol Cycle: A Numerical Study
Mélanie Bourgin
,
Simon Labarthe
,
Aicha Kriaa
,
Marie Lhomme
,
Philippe Gérard
et al.
Journal articles
hal-02863236v1
|
|
Microbiome definition re-visited: old concepts and new challenges
Gabriele Berg
,
Daria Rybakova
,
Doreen Fischer
,
Tomislav Cernava
,
Marie Christine Champomier Vergès
et al.
Journal articles
hal-02939442v1
|
|
Sildenafil citrate long-term treatment effects on cardiovascular reactivity in a SHR experimental model of metabolic syndrome
Yosra Doghri
,
Fabien Chetaneau
,
Moez Rhimi
,
Aicha Kriaa
,
Valérie Lalanne
et al.
Journal articles
hal-03371086v1
|
|
The intestinal microbiota regulates host cholesterol homeostasis
Tiphaine Le Roy
,
Emelyne Lécuyer
,
Benoit Chassaing
,
Moez Rhimi
,
Marie Lhomme
et al.
Journal articles
hal-02404677v1
|
|
Microbial impact on cholesterol and bile acid metabolism: current status and future prospects
Aicha Kriaa
,
Mélanie Bourgin
,
Aline Potiron
,
Hela Mkaouar
,
Amin Jablaoui
et al.
Journal articles
hal-02629276v1
|
|
Serine protease inhibitors and human wellbeing interplay: new insights for old friends
Hela Mkaouar
,
Nizar Akermi
,
Aicha Kriaa
,
Anne-Laure Abraham
,
Amin Jablaoui
et al.
Journal articles
hal-02318313v1
|
|
Glyphosate and glyphosate-based herbicide exposure during the peripartum period affects maternal brain plasticity, maternal behaviour and microbiome
Julie Dechartres
,
Jodi L Pawluski
,
Marie-Madeleine Gueguen
,
Amin Jablaoui
,
Emmanuelle Maguin
et al.
Journal articles
hal-02153623v1
|
|
The critical role of urease in yogurt fermentation with various combinations of streptococcus thermophilus and lactobacillus delbrueckii ssp. bulgaricus
R. Yamauchi
,
Emmanuelle Maguin
,
H. Horiuchi
,
M. Hosokawa
,
Y. Sasaki
et al.
Journal articles
hal-02625831v1
|
|
Para-Sulphonato-calix[n]arene capped silver nanoparticles challenge the catalytic efficiency and the stability of a novel human gut serine protease inhibitor.
Nizar Akermi
,
Hela Mkaouar
,
Aicha Kriaa
,
Amin Jablaoui
,
Souha Soussou
et al.
Journal articles
hal-02618271v1
|
|
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Aicha Kriaa
,
Mélanie Bourgin
,
Hela Mkaouar
,
Amin Jablaoui
,
Nizar Akermi
et al.
Journal articles
hal-02627963v1
|
|
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Matthias van Hul
,
Lucie Geurts
,
Hubert Plovier
,
Céline Druart
,
Amandine Everard
et al.
Journal articles
hal-02626402v1
|
|
Indole, a Signaling Molecule Produced by the Gut Microbiota, Negatively Impacts Emotional Behaviors in Rats
Mathilde Jaglin
,
Moez Rhimi
,
Catherine Philippe
,
Nicolas Pons
,
Aurelia Bruneau
et al.
Journal articles
hal-02361347v1
|
|
Biotechnological applications of serine proteases: A patent review.
Amin Jablaoui
,
Aicha Kriaa
,
Nizar Akermi
,
Hela Mkaouar
,
Ali Gargouri
et al.
Journal articles
hal-02618140v1
|
|
Relevant patented biotechnological applications of ecotin: An update.
Nizar Akermi
,
Hela Mkaouar
,
Amin Jablaoui
,
Aicha Kriaa
,
Ali Gargouri
et al.
Journal articles
hal-02618141v1
|
|
The Enterococcus faecalis virulence factor ElrA interacts with the human Four-and-a-Half LIM Domains Protein 2
Alexandre Jamet
,
Rozenn Dervyn
,
Nicolas Lapaque
,
Francesca Bugli
,
Naima Bermudez
et al.
Journal articles
hal-01607001v1
|
|
Unprecedented large inverted repeats at the replication terminus of circular bacterial chromosomes suggest a novel mode of chromosome rescue
Hela El Kafsi
,
Valentin Loux
,
Mahendra Mariadassou
,
Camille Blin
,
Hélène Chiapello
et al.
Journal articles
hal-01509688v1
|
|
Functional comparison of bacteria from the human gut and closely related non-gut bacteria reveals the importance of conjugation and a paucity of motility and chemotaxis functions in the gut environment
Dragana Dobrijevic
,
Anne-Laure Abraham
,
Alexandre Jamet
,
Emmanuelle Maguin
,
Maarten van de Guchte
et al.
Journal articles
hal-01353535v1
|
|
A reference gene catalogue of the pig gut microbiome
Liang Xiao
,
Jordi Estellé
,
Pia Kiilerich
,
Yuliaxis Ramayo Caldas
,
Zhongkui Xia
et al.
Journal articles
hal-01607746v1
|
|
Transcriptional interactions suggest niche segregation among microorganisms in the human gut
Damian Rafal Plichta
,
Agnieszka Sierakowska Juncker
,
Marcelo Bertalan
,
Elizabeth Rettedal
,
Laurent Gautier
et al.
Journal articles
hal-01533942v1
|
|
Beneficial metabolic effects of selected probiotics on diet-induced obesity and insulin resistance in mice are associated with improvement of dysbiotic gut microbiota
Jeanne Alard
,
Véronique Lehrter
,
Moez Rhimi
,
Irène Mangin
,
Véronique Peucelle
et al.
Journal articles
hal-03372071v1
|
|
Combining selected immunomodulatory Propionibacterium freudenreichii and Lactobacillus delbrueckii strains: Reverse engineering development of an anti-inflammatory cheese
Coline Ple
,
Jérôme Breton
,
Romain Richoux
,
Marine Nurdin
,
Stéphanie-Marie Deutsch
et al.
Journal articles
hal-01533860v1
|
|
Human gut microbes impact host serum metabolome and insulin sensitivity
Helle Krogh Pedersen
,
Valborg Gudmundsdottir
,
Henrik Bjørn Nielsen
,
Tuulia Hyotylainen
,
Trine Nielsen
et al.
Journal articles
hal-01594855v1
|
|
Siropins, novel serine protease inhibitors from gut microbiota acting on human proteases involved in inflammatory bowel diseases
Hela Mkaouar
,
Nizar Akermi
,
Vincent Mariaule
,
Samira Boudebbouze
,
Nadia Gaci
et al.
Journal articles
hal-01607278v1
|
|
Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
Kristoffer Forslund
,
Falk Hildebrand
,
Trine Nielsen
,
Gwen Falony
,
Emmanuelle Le Chatelier
et al.
Journal articles
hal-01535324v1
|
|
Bacillus phytases: Current status and future prospects
Mohamed Ali Borgi
,
Samira S. Boudebbouze
,
Hela H. Mkaouar
,
Emmanuelle Maguin
,
Moez M. Rhimi
et al.
Journal articles
hal-02634782v1
|
|
Recent patents on hypocholesterolemic therapeutic strategies: an update
Aline Potiron
,
Philippe Gerard
,
Tiphaine Le Roy
,
Philippe Lesnik
,
Emmanuelle Maguin
et al.
Journal articles
hal-01536579v1
|
|
The secreted L-arabinose isomerase displays anti-hyperglycemic effects in mice
Moez M. Rhimi
,
Luis L. Bermudez Humaran
,
Yuan Huang
,
Samira S. Boudebbouze
,
Nadia Gaci
et al.
Journal articles
hal-02640195v1
|
|
Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
Saeed Shoaie
,
Pouyan Ghaffari
,
Petia Kovatcheva-Datchary
,
Adil Mardinoglu
,
Partho Sen
et al.
Journal articles
hal-02634319v1
|
|
Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus: a chronicle of evolution in action.
Hela El Kafsi
,
Johan Binesse
,
Valentin Loux
,
Julien Buratti
,
Samira Boudebbouze
et al.
Journal articles
pasteur-01017376v1
|
|
The attractive recombinant phytase from[i] Bacillus licheniformis[/i]: biochemical and molecular characterization
Mohamed Ali Borgi
,
Samira Boudebbouze
,
Nushin Aghajari
,
Florette Szukala
,
Nicolas Pons
et al.
Journal articles
hal-01204385v1
|
|
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
H Bjørn Nielsen
,
Mathieu Almeida
,
Agnieszka Sierakowska Juncker
,
Simon Rasmussen
,
Junhua Li
et al.
Journal articles
hal-01195477v1
|
|
Local and systemic Immune mechanisms underlying the Anti-Colitis effects of the dairy Bacterium Lactobacillus delbrueckii.
Clarissa Santos Rocha
,
Ana Cristina Gomes-Santos
,
Thais Garcias Moreira
,
Marcela de Azevedo
,
Tessalia Diniz Luerce
et al.
Journal articles
hal-01204288v1
|
|
The attractive recombinant phytase from Bacillus licheniformis: biochemical and molecular characterization
Mohamed Ali Borgi
,
Samira Boudebbouze
,
Nushin Aghajari
,
Florette Szukala
,
Nicolas Pons
et al.
Journal articles
hal-03371033v1
|
|
Genome Sequence of "Candidatus Arthromitus" sp. Strain SFB-Mouse-NL, a Commensal Bacterium with a Key Role in Postnatal Maturation of Gut Immune Functions.
Alexandre Bolotine
,
Tomas de Wouters
,
Pamela Schnupf
,
Christiane Bouchier
,
Valentin Loux
et al.
Journal articles
hal-01204391v1
|
|
Genome sequence of[i] Lactobacillus delbrueckii[/i] subsp. [i]lactis[/i] CNRZ327, a dairy bacterium with anti-inflammatory properties.
Hela El Kafsi
,
Johan Binesse
,
Valentin Loux
,
Julien Buratti
,
Samira Boudebbouze
et al.
Journal articles
hal-01204323v1
|
|
An integrated catalog of reference genes in the human gut microbiome
Junhua Li
,
Huijue Jia
,
Xianghang Cai
,
Huanzi Zhong
,
Qiang Feng
et al.
Journal articles
hal-01195478v1
|
|
Patented Biotechnological Applications of Serpin: an Update
Nadia Gaci
,
Dragana Dobrijevic
,
Samira Boudebbouze
,
Bouziane Moumen
,
Emmanuelle Maguin
et al.
Journal articles
hal-03372089v1
|
|
High-throughput system for the presentation of secreted and surface-exposed proteins from Gram-positive bacteria in functional metagenomics studies
Dragana Dobrijevic
,
Gaetana Vandemeulebrouck
,
Kosei Tanaka
,
Tomas de Wouters
,
Rozenn Dervyn
et al.
Journal articles
hal-01190549v1
|
|
Crucial role of Pro 257 in the thermostability of Bacillus phytases: Biochemical and structural investigation
Ameny Farhat-Khemakhem
,
Mamdouh Ben Ali
,
Ines Boukhris
,
Bassem Khemakhem
,
Emmanuelle Maguin
et al.
Journal articles
hal-01003322v1
|
|
Richness of human gut microbiome correlates with metabolic markers
Emmanuelle Le Chatelier
,
Trine Nielsen
,
Junjie Qin
,
Edi Prifti
,
Falk Hildebrand
et al.
Journal articles
hal-01190602v1
|
|
The acid tolerant and cold-active beta-galactosidase from Lactococcus lactis strain is an attractive biocatalyst for lactose hydrolysis
Violette V. Vincent
,
Nushin N. Aghajari
,
Noemie N. Pollet
,
Anais A. Boisson
,
Samira S. Boudebbouze
et al.
Journal articles
hal-01001085v1
|
|
Characterization of glucansucrase and dextran from Weissella sp TN610 with potential as safe food additives
Wacim W. Bejar
,
Valerie V. Gabriel
,
Myriam M. Amari
,
Sandrine Morel
,
Monia M. Mezghani
et al.
Journal articles
hal-01004509v1
|
|
High-Throughput System for the Presentation of Secreted and Surface-Exposed Proteins from Gram-Positive Bacteria in Functional Metagenomics Studies
Dragana Dobrijevic
,
Gaetana Di Liberto
,
Kosei Tanaka
,
Tomas de Wouters
,
Rozenn Dervyn
et al.
Journal articles
hal-03372098v1
|
|
Patented biotechnological applications of serpin: an update
Nadia Gaci
,
Dragana Dobrijevic
,
Samira Boudebbouze
,
Bouziane Moumen
,
Emmanuelle Maguin
et al.
Journal articles
hal-01204489v1
|
|
Discriminatory antibacterial effects of calix[n]arene capped silver nanoparticles with regard to Gram positive and Gram negative bacteria
Samira Boudebbouze
,
Anthony W. Coleman
,
Yannick Tauran
,
Hela H. Mkaouar
,
Florent Perret
et al.
Journal articles
hal-01597154v1
|
|
Heterologous expression and optimization using experimental designs allowed highly efficient production of the PHY US417 phytase in Bacillus subtilis 168
Ameny Farhat-Khemakhem
,
Mounira Ben Farhat
,
Ines Boukhris
,
Wacim Bejar
,
Kameleddine Bouchaala
et al.
Journal articles
hal-02651383v1
|
|
Proteomic analysis of spontaneous mutants of Lactococcus lactis: Involvement of GAPDH and arginine deiminase pathway in H2O2 resistance
Tatiana Rochat
,
Samira S. Boudebbouze
,
Jean-Jacques J.-J. Gratadoux
,
Sebastien S. Blugeon
,
Philippe P. Gaudu
et al.
Journal articles
hal-01004182v1
|
|
Development of an Efficient In Vivo System (P-junc-TpaseIS(1223)) for Random Transposon Mutagenesis of Lactobacillus casei
Helene H. Licandro-Seraut
,
Sophie S. Brinster
,
Maarten M. van de Guchte
,
Helene H. Scornec
,
Emmanuelle Maguin
et al.
Journal articles
hal-01004149v1
|
|
Anti-inflammatory properties of dairy lactobacilli
Clarissa Santos Rocha
,
Omar Lakhdari
,
Hervé Blottière
,
Sébastien Blugeon
,
Harry Sokol
et al.
Journal articles
hal-03372099v1
|
|
Selection of Lactobacillus plantarum TN627 as a new probiotic candidate based on in vitro functional properties
Wacim Bejar
,
Ameny Farhat-Khemakhem
,
Slim Smaoui
,
Mohamed Makni
,
Mounira Ben Farhat
et al.
Journal articles
hal-02648072v1
|
|
Production of d-tagatose, a low caloric sweetener during milk fermentation using l-arabinose isomerase
Moez Rhimi
,
Hichem Chouayekh
,
Isabelle Gouillouard
,
Emmanuelle Maguin
,
Samir Bejar
et al.
Journal articles
hal-03370960v1
|
|
The acid-tolerant L-arabinose isomerase from the mesophilic Shewanella sp. ANA-3 is highly active at low temperatures
Moez Rhimi
,
Goran Bajic
,
Rimeh Ilhammami
,
Samira Boudebbouze
,
Emmanuelle Maguin
et al.
Journal articles
hal-03372118v1
|
|
The acid-tolerant L-arabinose isomerase from the mesophilic Shewanella sp ANA-3 is highly active at low temperatures
Moez Rhimi
,
Goran Bajic
,
Rimeh Ilhammami
,
Samira Boudebbouze
,
Emmanuelle Maguin
et al.
Journal articles
hal-01191314v1
|
|
Supramolecular stabilization of acid tolerant L-arabinose isomerase from Lactobacillus sakei
Said Jebors
,
Yannick Tauran
,
Nushin Aghajari
,
Samira Boudebbouze
,
Emmanuelle Maguin
et al.
Journal articles
hal-01190507v1
|
|
Production of d-tagatose, a low caloric sweetener during milk fermentation using l-arabinose isomerase
Moez Rhimi
,
Hichem Chouayekh
,
Isabelle Gouillouard
,
Emmanuelle Maguin
,
Samir Bejar
et al.
Journal articles
hal-03372117v1
|
|
Anti-inflammatory properties of dairy lactobacilli.
Clarissa Santos Rocha
,
Omar Lakhdari
,
Hervé M Blottière
,
Sébastien Blugeon
,
Harry Sokol
et al.
Journal articles
hal-00632487v1
|
|
Bacterial L-arabinose isomerases: industrial application for D-tagatose production
Samira Boudebbouze
,
Emmanuelle Maguin
,
Moez Rhimi
Journal articles
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|
|
Efficient bioconversion of lactose in milk and whey: immobilization and biochemical characterization of a beta-galactosidase from the dairy Streptococcus thermophilus LMD9 strain
Moez M. Rhimi
,
Anaïs Boisson
,
Magali Dejob
,
Samira Boudebouze
,
Emmanuelle Maguin
et al.
Journal articles
hal-02666355v1
|
|
The acid tolerant l-arabinose isomerase from the food grade Lactobacillus sakei 23K is an attractive d-tagatose producer
Moez Rhimi
,
Rimeh Ilhammami
,
Goran Bajic
,
Samira Boudebbouze
,
Emmanuelle Maguin
et al.
Journal articles
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|
|
Exploring the acidotolerance of beta-galactosidase from Lactobacillus delbrueckii subsp. bulgaricus: an attractive enzyme for lactose bioconversion.
Moez M. Rhimi
,
Nushin Aghajari
,
Bassem Jaouadi
,
Michel Juy
,
Samira S. Boudebbouze
et al.
Journal articles
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|
|
Prediction of surface exposed proteins in Streptococcus pyogenes, with a potential application to other Gram-positive bacteria
Aleksandr Barinov
,
Valentin Loux
,
Amal Hammani
,
Pierre P. Nicolas
,
Philippe P. Langella
et al.
Journal articles
hal-02663676v1
|
|
Rational design of Bacillus stearothermophilus US100 L-arabinose isomerase: potential applications for D-tagatose production
Moez M. Rhimi
,
Nushin Aghajari
,
Michel Juy
,
Hichem Chouayekh
,
Emmanuelle Maguin
et al.
|