emmanuelle morin

114
Documents

Publications

Publications

Image document

Draft genome sequence of Collimonas sp. strain H4R21, an effective mineral-weathering bacterial strain isolated from the beech rhizosphere

Morin E. , Stéphane Uroz , Kumar R. , Rey M.W. , Pham J. et al.
Microbiology Resource Announcements, 2024, 13 (8), ⟨10.1128/mra.00308-24⟩
Article dans une revue hal-04672477 v1
Image document

Extreme overall mushroom genome expansion in Mycena s.s. irrespective of plant hosts or substrate specializations

Christoffer Bugge Harder , Shingo Miyauchi , Máté Virágh , Alan Kuo , Ella Thoen et al.
Cell Genomics, 2024, 4 (7), pp.100586. ⟨10.1016/j.xgen.2024.100586⟩
Article dans une revue hal-04795684 v1
Image document

Collimonas rhizosphaerae sp. nov., a novel species isolated from the beech rhizosphere

Stéphane Uroz , Ségolène Bouche , Emmanuelle Morin , Mathilde Bocquart , Ravi Kumar et al.
International Journal of Systematic and Evolutionary Microbiology, 2024, 74 (7), pp.006481. ⟨10.1099/ijsem.0.006481⟩
Article dans une revue hal-04672474 v1
Image document

Speciation Underpinned by Unexpected Molecular Diversity in the Mycorrhizal Fungal Genus Pisolithus

Jonathan M Plett , Shingo Miyauchi , Emmanuelle Morin , Krista Plett , Johanna Wong-Bajracharya et al.
Molecular Biology and Evolution, 2023, 40 (3), pp.msad045. ⟨10.1093/molbev/msad045⟩
Article dans une revue hal-04143140 v1

Aboveground organic matter removal reshapes soil microbial functional group balance in temperate forests

François Maillard , Valentin Leduc , Cyrille Bach , Elisa Thébault , Arnaud Reichard et al.
Applied Soil Ecology, 2023, 184, pp.104776. ⟨10.1016/j.apsoil.2022.104776⟩
Article dans une revue hal-04219911 v1

Functional genomics gives new insights into the ectomycorrhizal degradation of chitin

François Maillard , Annegret Kohler , Emmanuelle Morin , Christian Hossann , Shingo Miyauchi et al.
New Phytologist, 2023, 238 (2), pp.845-858. ⟨10.1111/nph.18773⟩
Article dans une revue hal-04219917 v1

Fungal communities mediate but do not control leaf litter chemical transformation in a temperate oak forest

François Maillard , Valentin Leduc , Chloé Viotti , Allison Gill , Emmanuelle Morin et al.
Plant and Soil, 2023, 489 (1-2), pp. 573-591. ⟨10.1007/s11104-023-06040-4⟩
Article dans une revue hal-04219992 v1
Image document

A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy

Pamela Guerillot , Asaf Salamov , Clémentine Louet , Emmanuelle Morin , Pascal Frey et al.
Phytopathology, 2023, 113 (2), pp.252-264. ⟨10.1094/PHYTO-04-22-0128-R⟩
Article dans une revue hal-03847696 v1
Image document

Phylogenomics and Comparative Genomics Highlight Specific Genetic Features in Ganoderma Species

Yi-Fei Sun , Annie Lebreton , Jia-Hui Xing , Yu-Xuan Fang , Jing Si et al.
Journal of Fungi, 2022, 8 (3), pp.311. ⟨10.3390/jof8030311⟩
Article dans une revue hal-03627194 v1

Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales

Gang Wu , Shingo Miyauchi , Emmanuelle Morin , Alan Kuo , Elodie Drula et al.
New Phytologist, 2022, 10 (4), ⟨10.1111/nph.17858⟩
Article dans une revue hal-03473169 v1
Image document

Genomic and transcriptomic characterization of the Collimonas quorum sensing genes and regulon

Stephane Uroz , Océane Geisler , Laure Fauchery , Raphaël Lami , Alice M.S. Rodrigues et al.
FEMS Microbiology Ecology, 2022, 98 (11), ⟨10.1093/femsec/fiac100⟩
Article dans une revue hal-03915632 v1
Image document

The mineral weathering ability of Collimonas pratensis PMB3(1) involves a Malleobactin-mediated iron acquisition system

Laura Picard , Cédric Paris , Tiphaine Dhalleine , Emmanuelle Morin , Phil M. Oger et al.
Environmental Microbiology, 2022, 24 (2), pp. 784-802. ⟨10.1111/1462-2920.15508⟩
Article dans une revue hal-03194986 v1

Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi

Brian Looney , Shingo Miyauchi , Emmanuelle Morin , Elodie Drula , Pierre Emmanuel Courty et al.
New Phytologist, 2022, 233 (5), pp.2294-2309. ⟨10.1111/nph.17892⟩
Article dans une revue hal-04033326 v1
Image document

Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay

Hayat Hage , Shingo Miyauchi , Máté Virágh , Elodie Drula , Byoungnam Min et al.
Environmental Microbiology, 2021, ⟨10.1111/1462-2920.15423⟩
Article dans une revue hal-03226505 v1
Image document

Draft Genome Sequences of the Black Truffles Tuber brumale Vittad. and Tuber indicum Cook & Massee

Emmanuelle Morin , Claude Murat , Nicolas Cichocki , Herminia de La Varga , Annegret Kohler et al.
Microbiology Resource Announcements, 2021, 10 (4), ⟨10.1128/MRA.00799-20⟩
Article dans une revue hal-03324444 v1
Image document

Desert truffle genomes reveal their reproductive modes and new insights into plant–fungal interaction and ectendomycorrhizal lifestyle

José Eduardo Marqués‐gálvez , Shingo Miyauchi , Francesco Paolocci , Alfonso Navarro‐ródenas , Francisco Arenas et al.
New Phytologist, 2021, 229 (5), pp.2917-2932. ⟨10.1111/nph.17044⟩
Article dans une revue hal-03082553 v1
Image document

Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus

Salvatore Casarrubia , Elena Martino , Stefania Daghino , Annegret Kohler , Emmanuelle Morin et al.
Frontiers in Microbiology, 2020, 11, pp.341. ⟨10.3389/fmicb.2020.00341⟩
Article dans une revue hal-02905623 v1

Transcriptome Analysis of Apple Leaves Infected by the Rust Fungus Gymnosporangium yamadae at Two Sporulation Stages

Si-Qi Tao , Lucas Auer , Emmanuelle Morin , Ying-Mei Liang , Sébastien Duplessis
Molecular Plant-Microbe Interactions, 2020, 33 (3), pp.444-461. ⟨10.1094/MPMI-07-19-0208-R⟩
Article dans une revue hal-02989882 v1
Image document

Conserved white rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus

Shingo Miyauchi , Hayat Hage , Elodie Drula , Laurence Lesage-Meessen , Jean-Guy Berrin et al.
DNA Research, 2020, ⟨10.1093/dnares/dsaa011⟩
Article dans une revue hal-02868456 v2
Image document

Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits

Shingo Miyauchi , Enikő Kiss , Alan Kuo , Elodie Drula , Annegret Kohler et al.
Nature Communications, 2020, 11 (1), ⟨10.1038/s41467-020-18795-w⟩
Article dans une revue hal-03082507 v1

Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers

Florian Barbi , Annegret Kohler , Kerrie Barry , Preetisri Baskaran , Chris Daum et al.
Environmental Microbiology, 2020, 22 (3), pp.1089-1103. ⟨10.1111/1462-2920.14873⟩
Article dans une revue hal-02612520 v1

At the nexus of three kingdoms: the genome of the mycorrhizal fungus Gigaspora margarita provides insights into plant, endobacterial and fungal interactions

Francesco Venice , Stefano Ghignone , Alessandra Salvioli Di Fossalunga , Joelle Amselem , Mara Novero et al.
Environmental Microbiology, 2020, 22 (1), pp.122-141. ⟨10.1111/1462-2920.14827⟩
Article dans une revue hal-02628269 v1

Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina

Emmanuelle Morin , Shingo Miyauchi , Hélène San Clemente , Eric C. H. Chen , Adrian Pelin et al.
New Phytologist, 2019, 222 (3), pp.1584-1598. ⟨10.1111/nph.15687⟩
Article dans une revue hal-02181069 v1
Image document

The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata

Daniele Armaleo , Olaf Müller , François Lutzoni , Guillaume Blanc , Helge B Bode et al.
BMC Genomics, 2019, 20 (1), pp.605. ⟨10.1186/s12864-019-5629-x⟩
Article dans une revue hal-02192633 v1
Image document

Comparative transcriptomics of Gymnosporangium spp. teliospores reveals a conserved genetic program at this specific stage of the rust fungal life cycle

Si-Qi Tao , Bin Cao , Emmanuelle Morin , Ying-Mei Liang , Sébastien Duplessis
BMC Genomics, 2019, 20 (1), ⟨10.1186/s12864-019-6099-x⟩
Article dans une revue hal-02905570 v1

Multi-omic analyses of exogenous nutrient bag decomposition by the black morel Morchella importuna reveal sustained carbon acquisition and transferring

Hao Tan , Annegret Kohler , Renyun Miao , Tianhai Liu , Qiang Zhang et al.
Environmental Microbiology, 2019, 21 (10), pp.3909-3926. ⟨10.1111/1462-2920.14741⟩
Article dans une revue hal-02311393 v1
Image document

The Hydrophobin-Like OmSSP1 May Be an Effector in the Ericoid Mycorrhizal Symbiosis

Salvatore Casarrubia , Stefania Daghino , Annegret Kohler , Emmanuelle Morin , Hassine-Radhouane Khouja et al.
Frontiers in Plant Science, 2018, 9, pp.1-14. ⟨10.3389/fpls.2018.00546⟩
Article dans une revue hal-01844910 v1
Image document

Intraspecific comparative genomics of isolates of the Norway spruce pathogen (Heterobasidion parviporum) and identification of its potential virulence factors

Zhen Zeng , Hui Sun , Eeva J. Vainio , Tommaso Raffaello , Andriy Kovalchuk et al.
BMC Genomics, 2018, 19 (1), ⟨10.1186/s12864-018-4610-4⟩
Article dans une revue hal-01844924 v1
Image document

Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle

Claude Murat-Furminieux , Alan Kuo , Kerrie W Barry , Alicia Clum , Rhyan B Dockter et al.
Genome Announcements, 2018, 6 (25), ⟨10.1128/genomeA.00537-18⟩
Article dans une revue hal-02154520 v1
Image document

AgroDataRing: Une infrastructure partagée et mutualisée pour le stockage longue durée

Pierre Adenot , Stéphane Bansard , David Benaben , Veronique Brunaud , Christophe Caron et al.
Cahier des Techniques de l'INRA, 2018, N° Spécial: Données de la recherche, 7 p
Article dans une revue hal-02097192 v1
Image document

Secretome Analysis from the Ectomycorrhizal Ascomycete Cenococcum geophilum

Maira de Freitas Pereira , Claire Veneault-Fourrey , Patrice Vion , Frédéric Guinet , Emmanuelle Morin et al.
Frontiers in Microbiology, 2018, 9, pp.1-17. ⟨10.3389/fmicb.2018.00141⟩
Article dans une revue hal-02627372 v1

High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis

Eric C H Chen , Emmanuelle Morin , Denis Beaudet , Jessica Noel , Gokalp Yildirir et al.
New Phytologist, 2018, 220 (4), pp.1161-1171. ⟨10.1111/nph.14989⟩
Article dans une revue (article de synthèse) hal-02018426 v1
Image document

Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle

Claude Murat , Thibaut Payen , Benjamin Noël , Alan Kuo , Emmanuelle Morin et al.
Nature Ecology & Evolution, 2018, 2 (12), pp.1956-1965. ⟨10.1038/s41559-018-0710-4⟩
Article dans une revue hal-02094494 v1

Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists

Elena Martino , Emmanuelle Morin , Gwen-Aëlle Grelet , Alan Kuo , Annegret Kohler et al.
New Phytologist, 2018, 217 (3), pp.1213-1229. ⟨10.1111/nph.14974⟩
Article dans une revue hal-02080038 v1
Image document

The transcriptional landscape of basidiosporogenesis in mature Pisolithus microcarpus basidiocarp

Maira de Freitas Pereira , André Narvaes da Rocha Campos , Thalita Cardoso Anastacio , Emmanuelle Morin , Sérgio Hermínio Brommonschenkel et al.
BMC Genomics, 2017, 18 (1), ⟨10.1186/s12864-017-3545-5⟩
Article dans une revue hal-01568134 v1

Identification, evolution and functional characterization of two Zn CDF-family transporters of the ectomycorrhizal fungus Suillus luteus

Joske Ruytinx , Laura Coninx , Hoai Nguyen , Nick Smisdom , Emmanuelle Morin et al.
Environmental Microbiology Reports, 2017, 9 (4), pp.419-427. ⟨10.1111/1758-2229.12551⟩
Article dans une revue hal-01573243 v1

Comparative genomics and expression levels of hydrophobins from eight mycorrhizal genomes

F. Rineau , H. Lmalem , D. Ahren , F. Shah , T. Johansson et al.
Mycorrhiza, 2017, 27 (4), pp.383-396. ⟨10.1007/s00572-016-0758-4⟩
Article dans une revue hal-01597869 v1

A new promising phylogenetic marker to study the diversity of fungal communities: The Glycoside Hydrolase 63 gene

Leticia Pérez-Izquierdo , Emmanuelle Morin , J. P. Maurice , Francis Martin , A. Rincón et al.
Molecular Ecology Resources, 2017, 17 (6), pp.1-11. ⟨10.1111/1755-0998.12678⟩
Article dans une revue hal-01637748 v1
Image document

Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription factor repertoire of the plant symbiotic fungus Laccaria bicolor

Yohann Daguerre , E. Levati , Joske Ruytinx , Emilie Tisserant , Emmanuelle Morin et al.
BMC Genomics, 2017, 18 (1), pp.1-23. ⟨10.1186/s12864-017-4114-7⟩
Article dans une revue hal-01611442 v1
Image document

The SlZRT1 Gene Encodes a Plasma Membrane-Located ZIP (Zrt-, Irt-Like Protein) Transporter in the Ectomycorrhizal Fungus Suillus luteus.

Laura Coninx , Anneleen Thoonen , Eli Slenders , Emmanuelle Morin , Natascha Arnauts et al.
Frontiers in Microbiology, 2017, 8, pp.2320. ⟨10.3389/fmicb.2017.02320⟩
Article dans une revue hal-01683176 v1
Image document

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

Martina Peter , Annegret Kohler , Robin A. Ohm , Alan Kuo , Jennifer Kruetzmann et al.
Nature Communications, 2016, 7, pp.1-15. ⟨10.1038/ncomms12662⟩
Article dans une revue hal-01439098 v1

Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis

Jeanne Dore , Marie Perraud , Cindy Dieryckx , Annegret Kohler , Emmanuelle Morin et al.
New Phytologist, 2015, 208 (4), pp.1169-1187. ⟨10.1111/nph.13546⟩
Article dans une revue hal-01258333 v1

A survey of genome-wide single nucleotide polymorphisms through genome resequencing in the Périgord black truffle (Tuber melanosporum Vittad.)

Thibaut Payen , Claude Murat-Furminieux , Anaïs Gigant , Emmanuelle Morin , Stéphane de Mita et al.
Molecular Ecology Resources, 2015, 15 (5), pp.1243-1255. ⟨10.1111/1755-0998.12391⟩
Article dans une revue istex hal-01269418 v1
Image document

Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists

Annegret Kohler , Alan Kuo , Laszlo G. Nagy , Emmanuelle Morin , Kerrie W. Barry et al.
Nature Genetics, 2015, 47 (4), pp.410-U176. ⟨10.1038/ng.3223⟩
Article dans une revue hal-02639336 v1
Image document

Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins

Clément Pellegrin , Emmanuelle Morin , Francis M. Martin , Claire Veneault-Fourrey
Frontiers in Microbiology, 2015, 6, pp.1-15. ⟨10.3389/fmicb.2015.01278⟩
Article dans une revue hal-01269483 v1

The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses

Jonathan Michael Plett , Emilie Tisserant , Annick Brun-Jacob , Emmanuelle Morin , Igor V. Grigoriev et al.
Molecular Plant-Microbe Interactions, 2015, 28 (3), pp.261-273. ⟨10.1094/MPMI-05-14-0129-FI⟩
Article dans une revue hal-01269457 v1

Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

Robert Riley , Asaf A. Salamov , Daren W. Brown , Laszlo G. Nagy , Dimitrios Floudas et al.
Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (27), pp.9923-9928. ⟨10.1073/pnas.1400592111⟩
Article dans une revue hal-01578657 v1
Image document

Overview of the functional virulent genome of the coffee leaf rust pathogen Hemileia vastatrix with an emphasis on early stages of infection

Pedro Talhinhas , Helena G. Azinheira , Bruno Vieira , Andreia Loureiro , Silvia Tavares et al.
Frontiers in Plant Science, 2014, 5, ⟨10.3389/fpls.2014.00088⟩
Article dans une revue hal-01268536 v1
Image document

Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors

Antoine Persoons , Emmanuelle Morin , Christine Delaruelle , Thibaut Payen , Fabien Halkett et al.
Frontiers in Plant Science, 2014, 5, ⟨10.3389/fpls.2014.00450⟩
Article dans une revue hal-01269012 v1

Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment

Claire Veneault-Fourrey , Carine Commun , Annegret Kohler , Emmanuelle Morin , Raffaella Balestrini et al.
Fungal Genetics and Biology, 2014, 72, pp.168-181. ⟨10.1016/j.fgb.2014.08.007⟩
Article dans une revue hal-01123254 v1

Genome Sequence of the Mycorrhizal Helper Bacterium Pseudomonas fluorescens BBc6R8.

Aurélie Deveau , H Gross , Emmanuelle Morin , T Karpinets , S Utturkar et al.
Genome Announcements, 2014, 2 (1), pp.e01152-13 - e01152-13. ⟨10.1128/genomeA.01152-13⟩
Article dans une revue hal-01579698 v1
Image document

La flore fongique des truffières

Claude Murat-Furminieux , Marc Buée , Juliette Lengellé , François Le Tacon , Emmanuelle Morin et al.
Le Trufficulteur Français, 2014, 88 (3), pp.14-15
Article dans une revue hal-01269191 v1
Image document

Tracking a refined eIF4E-binding motif reveals Angel1 as a new partner of eIF4E.

Pauline Gosselin , Yvan Martineau , Julia Morales , Mirjam Czjzek , Virginie Glippa et al.
Nucleic Acids Research, 2013, 41 (16), pp.7783-92. ⟨10.1093/nar/gkt569⟩
Article dans une revue hal-01002440 v1

Correction for Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche (vol 109, pg 17501, 2012)

Emmanuelle Morin , Annegret Kohler , Adam R. Baker , Marie Foulongne-Oriol , Julien Lombard et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (10), pp.4146-4146. ⟨10.1073/pnas.1300201110⟩
Article dans une revue hal-01268023 v1
Image document

Below-ground fine-scale distribution and soil versus fine root detection of fungal and soil oomycete communities in a French beech forest

Aurore Coince , Olivier Cael , Cyrille Bach , Juliette Lengelle , Corinne Cruaud et al.
Fungal Ecology, 2013, 6 (3), pp.223-235. ⟨10.1016/j.funeco.2013.01.002⟩
Article dans une revue hal-01578661 v1
Image document

Functional Assays and Metagenomic Analyses Reveals Differences between the Microbial Communities Inhabiting the Soil Horizons of a Norway Spruce Plantation

Stéphane Uroz , Panos Ioannidis , Juliette Lengelle , Aurélie Cébron , Emmanuelle Morin et al.
PLoS ONE, 2013, 8 (2), ⟨10.1371/journal.pone.0055929⟩
Article dans une revue hal-01119698 v1
Image document

First identification of polymorphic microsatellite markers in the Burgundy truffle, Tuber aestivum (Tuberaceae)

Virginie Molinier , Claude Murat-Furminieux , Emmanuelle Morin , Armelle Gollotte , Daniel Wipf et al.
Applications in Plant Sciences, 2013, 1 (2), 4 p. ⟨10.3732/apps.1200220⟩
Article dans une revue hal-01268457 v1

Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

Emilie Tisserant , Mathilde Malbreil , Alan Kuo , Annegret Kohler , Aikaterini Symeonidi et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (50), pp.20117-20122. ⟨10.1073/pnas.1313452110⟩
Article dans une revue hal-01578663 v1
Image document

Characterization of transposable elements in the ectomycorrhizal fungus <em>Laccaria bicolor</em>

Jessy Labbé , Claude Murat , Emmanuelle Morin , Gerald A. Tuskan , François F. Le Tacon et al.
PLoS ONE, 2012, 7 (8), ⟨10.1371/journal.pone.0040197⟩
Article dans une revue hal-02650918 v1
Image document

Fungal soil communities in a young transgenic poplar plantation form a rich reservoir for fungal root communities

Lara Danielsen , Andrea Thürmer , Peter Meinicke , Marc Buée , Emmanuelle Morin et al.
Ecology and Evolution, 2012, 2 (8), pp.1935-1948. ⟨10.1002/ece3.305⟩
Article dans une revue hal-01267977 v1

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

Emmanuelle Morin , Annegret Kohler , Adam R. Baker , Marie Foulongne-Oriol , Julien Lombard et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (43), pp.17501-17506. ⟨10.1073/pnas.1206847109⟩
Article dans une revue hal-01267851 v1
Image document

RNA-Seq of early-infected poplar leaves by the rust pathogen Melampsora larici-populina uncovers PtSultr3;5, a fungal-induced host sulfate transporter

Benjamin Petre , Emmanuelle Morin , Emilie Tisserant , Stéphane Hacquard , Corinne da Silva et al.
PLoS ONE, 2012, 7 (8), pp.1-12. ⟨10.1371/journal.pone.0044408⟩
Article dans une revue hal-01267887 v1

Distinct Ectomycorrhizospheres Share Similar Bacterial Communities as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes

Stéphane Uroz , P. Oger , Emmanuelle Morin , P. Frey-Klett
Applied and Environmental Microbiology, 2012, 78 (8), pp.3020 - 3024. ⟨10.1128/AEM.06742-11⟩
Article dans une revue hal-01268355 v1

Polyaminoquinoline iron chelators for vectorization of antiproliferative agents: design, synthesis, and validation.

Vincent Corcé , Emmanuelle Morin , Solène Guihéneuf , Eric Renault , Stéphanie Renaud et al.
Bioconjugate Chemistry, 2012, 23 (9), pp.1952-68. ⟨10.1021/bc300324c⟩
Article dans une revue inserm-00863636 v1

The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes

Dimitrios Floudas , Manfred Binder , Robert Riley , Kerrie Barry , Robert A. Blanchette et al.
Science, 2012, 336 (6089), pp.1715-1719. ⟨10.1126/science.1221748⟩
Article dans une revue hal-01268324 v1

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen.

Ake Olson , Andrea Aerts , Fred Asiegbu , Lassaâd Belbahri , Ourdia Bouzid et al.
New Phytologist, 2012, 194 (4), pp.1001-1013. ⟨10.1111/j.1469-8137.2012.04128.x⟩
Article dans une revue hal-02649642 v1
Image document

The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont

Emilie Tisserant , Annegret Kohler , Pascale Dozolme , R. Balestrini , K. Benabdellah et al.
New Phytologist, 2012, 196 (3), pp.755-769. ⟨10.1111/j.1469-8137.2011.03948.x⟩
Article dans une revue hal-01267801 v1

Cationic Polydiacetylene Micelles for Gene Delivery

Emmanuelle Morin , Marc Nothisen , Alain Wagner , Jean-Serge Remy
Bioconjugate Chemistry, 2011, ⟨10.1021/bc200083p⟩
Article dans une revue hal-02475710 v1

ITS-1 versus ITS-2 pyrosequencing: a comparison of fungal populations in truffle grounds

Antonietta Mello , Chiara Napoli , Claude Murat , Emmanuelle Morin , Giuseppe Marceddu et al.
Mycologia, 2011, 103 (6), pp.1184-1193. ⟨10.3852/11-027⟩
Article dans une revue hal-02645002 v1

Genome-wide search and functional identification of transcription factors in the mycorrhizal fungus Tuber melanosporum

Barbara Montanini , Elisabetta Levati , Angelo Bolchi , Annegret Kohler , Emmanuelle Morin et al.
New Phytologist, 2011, 189 (3), pp.736 - 750. ⟨10.1111/j.1469-8137.2010.03525.x⟩
Article dans une revue hal-02652250 v1

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

Daniel C. Eastwood , Dimitrios Floudas , Manfred Binder , Andrzej Majcherczyk , Patrick Schneider et al.
Science, 2011, 333 (6043), pp.762 - 765. ⟨10.1126/science.1205411⟩
Article dans une revue hal-02647602 v1

Gene delivery with polycationic fullerene hexakis-adducts

David Sigwalt , Michel Holler , Julien Iehl , Jean-François Nierengarten , Marc Nothisen et al.
Chemical Communications, 2011, 47 (16), pp.4640-4642. ⟨10.1039/c0cc05783e⟩
Article dans une revue hal-02478560 v1

Distribution and localization of microsatellites in the Perigord black truffle genome and identification of new molecular markers

Claude Murat , Claudia Riccioni , Beatrice Belfiori , Nicolas Cichocki , Jessy Labbé et al.
Fungal Genetics and Biology, 2011, 48 (6), pp.592 - 601. ⟨10.1016/j.fgb.2010.10.007⟩
Article dans une revue istex hal-02650008 v1
Image document

Obligate biotrophy features unraveled by the genomic analysis of rust fungi

Sébastien Duplessis , Christina A C. A. Cuomo , Yao-Cheng Y.-C. Lin , Andrea Aerts , Emilie Tisserant et al.
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (22), pp.9166-9171. ⟨10.1073/pnas.1019315108⟩
Article dans une revue hal-01000169 v1

Survey and analysis of simple sequence repeats in the Laccaria bicolor genome, with development of microsatellite markers

Jessy Labbe , Claude Murat-Furminieux , Emmanuelle Morin , François F. Le Tacon , Francis Martin
Current Genetics, 2011, 57 (2), pp.75 - 88. ⟨10.1007/s00294-010-0328-9⟩
Article dans une revue istex hal-02643205 v1

Deep RNA sequencing improved the structural annotation of the Tuber melanosporum transcriptome

Emilie Tisserant , C. da Silva , Annegret Kohler , Emmanuelle Morin , Patrick Wincker et al.
New Phytologist, 2011, 189 (3), pp.883-891. ⟨10.1111/j.1469-8137.2010.03597.x⟩
Article dans une revue hal-02645504 v1
Image document

Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

Francis Martin , Annegret Kohler , Claude Murat , Raffaella Balestrini , Pedro M Coutinho et al.
Nature, 2010, 464 (7291), pp.1033-1038. ⟨10.1038/nature08867⟩
Article dans une revue cea-00907731 v1

The ectomycorrhizal fungus Laccaria bicolor stimulates lateral root formation in poplar and arabidopsis through auxin transport and signaling

Judith Felten , Annegret Kohler , Emmanuelle Morin , Rishikesh P. Bhalerao , Klaus Palme et al.
Plant Physiology, 2009, 151 (4), pp.1991-2005. ⟨10.1104/pp.109.147231⟩
Article dans une revue hal-02667577 v1

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

Marc Buée , Marlis Reich , Claude Murat , Emmanuelle Morin , R.H. Nilsson et al.
New Phytologist, 2009, 184 (2), pp.449-456. ⟨10.1111/j.1469-8137.2009.03003.x⟩
Article dans une revue hal-02667034 v1

Translational control genes in the sea urchin genome.

Julia Morales , Odile Mulner-Lorillon , Bertrand Cosson , Emmanuelle Morin , Robert Bellé et al.
Developmental Biology, 2006, 300 (1), pp.293-307. ⟨10.1016/j.ydbio.2006.07.036⟩
Article dans une revue hal-00358450 v1

The dog and rat olfactory receptor repertoires

Pascale Quignon , Mathieu Giraud , Maud Rimbault , Patricia Lavigne , Sandrine Tacher et al.
Genome Biology, 2005, 6 (10), pp.R83. ⟨10.1186/gb-2005-6-10-r83⟩
Article dans une revue hal-00107100 v1

Do SSPs regulate ectomycorrhizal symbiosis in response to biotic and abiotic nutrient signals in trees?

C. Bonnot , Alexis Chartoire , Emmanuelle Morin , Annegret Kohler , Francis Martin
INUPRAG Symposium on Integrative Plant Biology 2023, Feb 2023, Umeå, Sweden
Communication dans un congrès hal-04186836 v1

What are the roles of SSPs in regulating ECM symbiosis in response to biotic and abiotic nutritional signals in trees?

C. Bonnot , Him K. Shrestha , Alexis Chartoire , Alexandra Hénocq , Cécile Gaumétou et al.
JOURNÉES 2022 SYMBIPHYT, Nov 2022, Dijon, France
Communication dans un congrès hal-04186873 v1

Phylogenetics and comparative transcriptomics of Gymnosporangium species

Sébastien Duplessis , Si-Qi Tao , Emmanuelle Morin , Tian Cheng-Ming , Liang Ying-Mei
Rust workshop of the 30th Fungal Genetics Conference, Genetics Society of America, Mar 2019, Asilomar, Pacific Grove, Californie, United States
Communication dans un congrès hal-03251310 v1

Investigation of the regulation of ectomycorrhizal symbiosis by nutrient signalling in Poplar

C. Bonnot , Alexandra Hénocq , Cécile Gaumétou , Emmanuelle Morin , Annegret Kohler et al.
4th international Molecular Mycorrhiza Meeting, Feb 2019, Turin, Italy
Communication dans un congrès hal-04186913 v1

The small secreted protein OmSSP1 is up-regulated in ericoid mycorrhiza and is involved in symbiosis

Stefania Daghino , Salvatore Casarrubia , Annegret Kohler , Emmanuelle Morin , Yohann Daguerre et al.
Effectome meeting XI, Nov 2018, Lauret, France
Communication dans un congrès hal-03047789 v1

Investigation of the regulation of ECM symbiosis by nutrient signalling in plants

C. Bonnot , Alexandra Hénocq , Cécile Gaumétou , Emmanuelle Morin , Annegret Kohler et al.
VI WORKSHOP PLANT PEPTIDES AND RECEPTORS, Sep 2018, Antequera, Spain
Communication dans un congrès hal-04186927 v1

Organic Matter removal impacts forest microbial community and tree physiology.

François Maillard , Valentin Leduc , Chloé Viotti , Elisa Thébault , Cyrille Bach et al.
Functional Ecology Conference, Dec 2018, NANCY (54), France
Communication dans un congrès hal-03339728 v1

Using genomics to understand the role of ectomycorrhizal fungi in the forest ecosystem

Annegret Kohler , Marc Buée , Lucas Auer , Emmanuelle Morin , Alan Kuo et al.
Ecology of Soil Microorganisms Conference, Jul 2018, Helsinki, Finland
Communication dans un congrès hal-03339800 v1

Cd-regulated plant and fungal genes in the ericoid mycorrhizal symbiosis

Salvatore Casarrubia , Elena Martino, , Stefania Daghino, , Annegret Kohler , Emmanuelle Morin et al.
Riunione annuale dei gruppi di lavoro SBI, Biologia Cellulare e Molecolare, Biotecnologie e Differenziamento, Jun 2018, Sanremo, Italy
Communication dans un congrès hal-03467505 v1

Comparative genomics and transcriptomics for understanding ericoid mycorrhizal fungi ecology

Elena Martino, , Emmanuelle Morin , Gwen-Aëlle Grelet , Annegret Kohler , Stefania Daghino et al.
9th International Conference on Mycorrhiza, ICOM9, Jul 2017, Prague, Czech Republic
Communication dans un congrès hal-03470193 v1

The effectors of Corynespora cassiicola virulence in rubber tree. In IRRDB International Rubber

Valérie Pujade-Renaud , David Lopez , Sébastien Ribeiro , Dinh Minh Tran , Marine Deon et al.
IRRDB International Rubber Conference, International Rubber Resarch Development Board IRRDB., Aug 2015, Ho Chi Minh, Vietnam
Communication dans un congrès hal-01603469 v1

Patterns of genomic variation in the poplar rust fungus <em>Melampsora larici-populina</em> identify pathogenesis-related factors

Antoine Persoons , Emmanuelle Morin , Christine Delaruelle , Thibaut Payen , Fabien Halkett et al.
Max-Planck-ARBRE inter-departmental workshop on plant-fungus interactions, Nov 2014, Nancy, France
Communication dans un congrès hal-02794927 v1

Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus <em>Melampsora larici-populina</em>

Benjamin Petre , Stéphane S. Hacquard , Antoine Persoons , Emilie Tisserant , Emmanuelle Morin et al.
IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States
Communication dans un congrès hal-02801804 v1
Image document

First identification of polymorphic microsatellite markers in the Burgundy truffle, Tuber aestivum (Tuberaceae)

Virginie Molinier , Claude Murat-Furminieux , Emmanuelle Morin , Armelle Gollotte , Daniel Wipf et al.
3. Annual Joint Meeting on Plant Microbe Interactions, Sep 2014, Dijon, France
Communication dans un congrès hal-01268760 v1

Metagenomics of the forest soil microbiome: from diversity to function

Stéphane S. Uroz , Marc Buée , Francis Martin , Aurore Coince , Claude Murat et al.
1. EcoFINDERS WP3 workshop : 'Strategies and tools for sampling, DNA extraction, DNA sequencing and bioinformatics, 2011, Nancy, France
Communication dans un congrès hal-02804475 v1

Modulation of plant and fungal gene expression upon Cd exposure and symbiosis in ericoid mycorrhizal Vaccinium myrtillus

Elena Martino, , Salvatore Casarrubia , Stefania Daghino , Annegret Kohler , Emmanuelle Morin et al.
115th Conference of the Italian Botanical Society, Sep 2020, online, Italy
Poster de conférence hal-03469225 v1

Transcriptomic analysis of plant and fungal Cd-regulated genes in the ericoid mycorrhizal symbiosis

Salvatore Casarrubia , Elena Martino, , Stefania Daghino , Annegret Kohler , Emmanuelle Morin et al.
4th international Molecular Mycorrhiza Meeting, Feb 2019, Turin, Italy
Poster de conférence hal-03469280 v1

Phylogenetics and comparative transcriptomics of Gymnosporangium species.

Si-Qi Tao , Emmanuelle Morin , Tian Cheng-Ming , Liang Ying-Mei , Sébastien Duplessis
30th Fungal Genetics Conference, Mar 2019, Asilomar, Pacific Grove, Californie, United States
Poster de conférence hal-03253596 v1

OmSSP1, a hydrophobin-like small secreted protein, is a putative effector in ericoid mycorrhiza

Stefania Daghino , Salvatore Casarrubia , Annegret Kohler , Emmanuelle Morin , Yohann Daguerre et al.
4th international Molecular Mycorrhiza Meeting, Feb 2019, Turin, Italy
Poster de conférence hal-03469295 v1
Image document

Comparative genomics of Rhizophagus irregularis , R. cerebriforme , R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina

Emmanuelle Morin , Hélène San Clemente , Shingo Miyauchi , Eric C H Chen , Alan Kuo et al.
JOBIM, Jul 2019, Nantes, France
Poster de conférence hal-03324335 v1
Image document

Regulation of ectomycorrhizal symbiosis by nutrient signalling in poplar

C. Bonnot , A. Hénocq , C. Gaumétou , Emmanuelle Morin , Annegret Kohler et al.
3rd MPIterMic - ARBRE workshop on Molecular Plant Fungal Interactions, Nov 2018, Cologne, Germany
Poster de conférence hal-04187772 v1

The hydrophobin-like OmSSP1 may be an effector in the ericoid mycorrhizal symbiosis

Salvatore Casarrubia , Stefania Daghino , Annegret Kohler , Emmanuelle Morin , Hassine-Radhouane Khouja et al.
3rd MPIterMic - ARBRE workshop on Molecular Plant Fungal Interactions, Nov 2018, Cologne, Germany
Poster de conférence hal-03469309 v1
Image document

Exploring genome diversity of 6 strains of the model arbuscular mycorrhizal symbiont Rhizophagus irregularis

Emmanuelle Morin , Eric C H Chen , Alan Kuo , Denis Beaudet , Igor V Grigoriev et al.
JOBIM, Jul 2018, Marseille, France
Poster de conférence hal-03324326 v1

Transplantation de litières foliaires de chêne: réponses taxonomique et fonctionnelle des communautés fongiques associées à la décomposition

François Maillard , Isabelle Ziegler-Devin , Emmanuelle Morin , Valentin Leduc , Nicolas Brosse et al.
Séminaire annuel de l’Ecole Doctorale RP2E, Jan 2017, Vandoeuvre-les -Nancy, France
Poster de conférence hal-03340972 v1

Supersize fungi: Rust in the genomics era!

Cécile Lorrain , Mondo Sj , Emmanuelle Morin , Kurt M Labutti , Anna Lipzen et al.
29th Fungal Genetics Conference, Mar 2017, Asilomar, Pacific Grove, Californie, United States
Poster de conférence hal-03253560 v1

The small secreted protein OmSSP1 is up-regulated in ericoid mycorrhiza and is involved in symbiosis

Salvatore Casarrubia , Stefania Daghino , Annegret Kohler , Emmanuelle Morin , Yohann Daguerre et al.
9th International Conference on Mycorrhiza, ICOM9, Jul 2017, Prague, Czech Republic
Poster de conférence hal-03470134 v1

New insights from genome and transcriptome analyses of four ericoid mycorrhizal fungi

Elena Martino, , Gwen-Aëlle Grelet , Emmanuelle Morin , Annegret Kohler , Stefania Daghino et al.
13th European Conference on Fungal Genetics, Apr 2016, Paris, France
Poster de conférence hal-03470143 v1

Exploring genome diversity of mycorrhizal fungi to understand symbiosis

Emmanuelle Morin , Annegret Kohler , Alan Kuo , Claire Veneault-Fourrey , Clément Pellegrin et al.
23rd Annual International Conference on Intelligent Systems for Molecular Biology and the 14th European Conference on Computational Biology 2015, Jul 2015, Dublin, Ireland
Poster de conférence hal-03080200 v1

Sequence-driven in silico discovery of potential effectors involved in Corynespora cassiicola pathogenesis

David Lopez , Philippe Label , Sébastien Ribeiro , Emmanuelle Morin , Annegret Kohler et al.
JOBIM, Jul 2015, Clermont-Fd, France. , 2015, Actes de la conférence JOBIM 2015
Poster de conférence hal-01601480 v1

Genetic diversity of Tuber aestivum / uncinatum

Virginie Molinier , Claude Murat-Furminieux , Emmanuelle Morin , Patrick Wincker , Armelle Gollotte et al.
ALPHY Meeting, Mar 2012, Banyuls sur Mer, France. , 2012
Poster de conférence hal-01268765 v1