Eddy Elisée

29
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Publications

Publications

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A refined picture of the native amine dehydrogenase family revealed by extensive biodiversity screening

Eddy Elisée , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
Nature Communications, 2024, 15, pp.4933. ⟨10.1038/s41467-024-49009-2⟩
Article dans une revue hal-04645174 v1
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Native amine dehydrogenases can catalyze the direct reduction of carbonyl compounds to alcohols in the absence of ammonia

Aurélie Fossey-Jouenne , Laurine Ducrot , Ewald Jongkind , Eddy Elisée , Anne Zaparucha et al.
Frontiers in Catalysis, 2023, 3, pp.1105948. ⟨10.3389/fctls.2023.1105948⟩
Article dans une revue hal-04178006 v1
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Expanding the substrate scope of native amine dehydrogenases through in silico structural exploration and targeted protein engineering

Laurine Ducrot , Megan Bennett , Gwenaëlle André-Leroux , Eddy Elisée , Sacha Marynberg et al.
ChemCatChem, 2022, 2022, pp.e202200880. ⟨10.1002/cctc.202200880⟩
Article dans une revue cea-03781286 v1
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Detection and characterization of VIM-52, a new variant of VIM-1 from Klebsiella pneumoniae clinical isolate

Marie de Barsy , Paola Sandra Mercuri , Saoussen Oueslati , Eddy Elisée , Te-Din Huang et al.
Antimicrobial Agents and Chemotherapy, 2021, 65 (11), pp.e02660-20. ⟨10.1128/aac.02660-20⟩
Article dans une revue hal-03336206 v1
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Azetidinimines as a novel series of non-covalent broad-spectrum inhibitors of β-lactamases with submicromolar activities against carbapenemases KPC-2 (class A), NDM-1 (class B) and OXA-48 (class D)

Eugénie Romero , Saoussen Oueslati , Mohamed Benchekroun , Agathe C.A. D’hollander , Sandrine Ventre et al.
European Journal of Medicinal Chemistry, 2021, 219, ⟨10.1016/j.ejmech.2021.113418⟩
Article dans une revue hal-03227989 v1
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Genetic, Biochemical, and Structural Characterization of CMY-136 Beta-Lactamase, a Peculiar CMY-2 Variant

Agustin Zavala , Pascal ́ Retailleau , Eddy Elisée , Bogdan Iorga , Thierry Naas
ACS Infectious Diseases, 2019, 5 (4), pp.528-538. ⟨10.1021/acsinfecdis.8b00240⟩
Article dans une revue hal-02119851 v1
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Performance evaluation of molecular docking and free energy calculations protocols using the D3R Grand Challenge 4 dataset

Eddy Elisée , Vytautas Gapsys , Nawel Mele , Ludovic Chaput , Edithe Selwa et al.
Journal of Computer-Aided Molecular Design, 2019, 33 (12), pp.1031-1043. ⟨10.1007/s10822-019-00232-w⟩
Article dans une revue hal-02346257 v1
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Blinded evaluation of cathepsin S inhibitors from the D3RGC3 dataset using molecular docking and free energy calculations

Ludovic Chaput , Edithe Selwa , Eddy Elisée , Bogdan Iorga
Journal of Computer-Aided Molecular Design, 2019, 33 (1), pp.93-103. ⟨10.1007/s10822-018-0161-7⟩
Article dans une revue hal-02119834 v1
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Blinded evaluation of farnesoid X receptor (FXR) ligands binding using molecular docking and free energy calculations

Edithe Selwa , Eddy Elisée , Agustin Zavala , Bogdan Iorga
Journal of Computer-Aided Molecular Design, 2018, 32 (1), pp.273-286. ⟨10.1007/s10822-017-0054-1⟩
Article dans une revue hal-03164746 v1

Expanding the portfolio of native Amine Dehydrogenases by extensive biodiversity screening

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Raphael Meheust , Mark Stam et al.
BioTrans 2023, Jun 2023, La Rochelle, France
Communication dans un congrès hal-04327737 v1

Expanding the portfolio of enzymes for biocatalysis by extensive biodiversity screening

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Raphael Meheust , Mark Stam et al.
6e Symposium International de l'AFERP, Jul 2023, Orsay - Paris, France
Communication dans un congrès hal-04327790 v1

Diverse Amine dehydrogenases for the biocatalytic synthesis of amines

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Ombeline Mayol , Raphael Meheust et al.
ENZYNOV'2, Oct 2023, Paris-Romainville, France
Communication dans un congrès hal-04327765 v1

Expanding the portfolio of native Amine Dehydrogenases by extensive biodiversity screening

Carine Vergne-Vaxelaire , Eddy Elisée , Laurine Ducrot , Raphael Meheust , Mark Stam et al.
Amine BioCat 5.0, Nov 2022, Groningen, Netherlands
Communication dans un congrès hal-04328280 v1

Metagenomic expansion and active site analysis of the Amine Dehydrogenase family

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Mark Stam , Pelletier Eric et al.
International Congress on Biocatalysis 2022, Aug 2022, Hamburg, Germany
Communication dans un congrès hal-04360123 v1
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Devenir des hydrochlordécones, du mirex et d'autres analogues en condition de (bio)dégradation réductive

Oriane Della-Negra , Marion L. Chevallier , Sebastien Chaussonnerie , Agnès Barbance , Delphine Muselet et al.
50e congrès du Groupe Français de recherche sur les Pesticides,, May 2022, Namur, Belgique
Communication dans un congrès hal-04409949 v1
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La chlordécone sous forme C$_{10}$Cl$_{10}$O existe-t-elle vraiment ?

Pierre Loïc Saaidi , Oriane Della-Negra , Brieuc Le Cacher De Bonneville , Delphine Muselet , Eddy Elisée et al.
Rencontres Chlordécone 2022 - Chlordécone, Connaître pour Agir, Dec 2022, Le Gosier (Guadeloupe), France. pp.18-19
Communication dans un congrès hal-04288064 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using sequence and structure-based approaches

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
29th Conference on Intelligent Systems for Molecular Biology (ISMB) - 20th European Conference on Computational Biology (ECCB), Jul 2021, Virtual conference, United States
Communication dans un congrès hal-04359840 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using innovative in silico approaches

Eddy Elisée , Raphael Meheust , Laurine Ducrot , Mark Stam , Eric Pelletier et al.
International Symposium on High-Throughput Catalyst Design, Jun 2021, Lille (Virtual), France
Communication dans un congrès hal-04328578 v1

An overview of the native amine dehydrogenase family : discovery, structural and genomic exploration, protein engineering and biocatalytic applications

Carine Vergne-Vaxelaire , Laurine Ducrot , Megan Bennett , Eddy Elisée , Karine Bastard et al.
28e colloque du Club de Biocatalyse en Synthèse Organique, Arkema; Proteus; CBSO, Sep 2021, Lège Cap-Ferret, France
Communication dans un congrès hal-04328296 v1

Expanding the substrate scope of Amine Dehydrogenases by protein engineering

Carine Vergne-Vaxelaire , Megan Bennett , Laurine Ducrot , Eddy Elisée , Anne Zaparucha et al.
BioTrans 2021, Jul 2021, Graz (virtual conference), Austria
Communication dans un congrès hal-04328324 v1

Towards in silico prediction of beta-lactamase-mediated antibiotic resistance using free energy calculations

Edithe Selwa , Eddy Elisée , Thierry Naas , Bogdan Iorga
255th American Chemical Society Meeting, American Chemical Society, Mar 2018, Nouvelle Orléans (LA), United States
Communication dans un congrès hal-04336356 v1

In silico prediction of β-lactamase hydrolysis efficiency: Finding the right balance between kinetic and thermodynamic terms

Agustin Zavala , Saoussen Oueslati , Edithe Selwa , Eddy Elisée , Thierry Naas et al.
256th ACS National Meeting, American Chemical Society (ACS), Aug 2018, Boston (MA), United States
Communication dans un congrès hal-04336608 v1

Activation mechanism of carbonic anhydrases explored by molecular dynamics simulations

Eddy Elisée , Bogdan Iorga
11th International Conference on Carbonic Anhydrases, Jun 2018, Bucharest, Romania
Communication dans un congrès hal-04336011 v1
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Devenir des hydrochlordécones, du mirex et du chlordécol en condition de (bio)dégradation réductive

Oriane Della-Negra , Marion Chevallier , Sébastien Chaussonnerie , Agnès Barbance , Delphine Muselet et al.
Rencontres Chlordécone 2022 - Chlordécone, connaître pour agir, Dec 2022, Le Gosier (Guadeloupe), France. CPSN, CLoReCA, 2022. Actes du colloque scientifique « Chlorde cone, connaî tre pour agir ». Le Gosier, Guadeloupe, 12-14 de cembre 2022, pp.133-134, 2022
Poster de conférence hal-04288083 v1

An integrative bioinformatics approach to explore the biodiversity of enzyme families

Elisée Eddy , Mark Stam , Raphaël Méheust , Carine Vergne-Vaxelaire , David Vallenet
Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM) 2022, Jul 2022, Rennes, France
Poster de conférence hal-04360074 v1

Metagenomic expansion and active site analysis of the Amine Dehydrogenase family

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Mark Stam , Pelletier Eric et al.
International Congress on Biocatalysis 2022, Aug 2022, Hamburg, Germany
Poster de conférence hal-04360138 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using sequence and structure-based approaches

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
BioTrans 2021, Jul 2021, Graz (Virtual Conference), Austria
Poster de conférence hal-04360034 v1

MODAMDH: identification of diverse Amine Dehydrogenases by screening biodiversity using sequence and structure-based approaches

Elisée Eddy , Laurine Ducrot , Raphaël Méheust , Karine Bastard , Aurélie Fossey-Jouenne et al.
29th Conference on Intelligent Systems for Molecular Biology (ISMB) - 20th European Conference on Computational Biology (ECCB), Jul 2021, Virtual conference, United States
Poster de conférence hal-04359878 v1

Mutations on beta-lactamases evaluated using free energy calculations

Eddy Elisée , Edithe Selwa , Bogdan Iorga
21e Congrès du groupe de graphisme et modélisation moléculaire (GGMM), Apr 2019, Nice, France
Poster de conférence hal-04335594 v1