Elisabetta Giuffra

85
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Publications

Publications

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Guiding eQTL mapping and genomic prediction of gene expression in three pig breeds with tissue-specific epigenetic annotations from early development

Fanny Mollandin , Hervé Acloque , Maria Ballester , Marco Bink , Mario Calus et al.

Genomics, 2026, 118 (1), pp.111158. ⟨10.1016/j.ygeno.2025.111158⟩

Article dans une revue hal-05511224v1
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Comparative genomics and epigenomics of transcriptional regulation

Huaijun Zhou , Emily L. Clark , Dailu Guan , Sandrine Lagarrigue , Lingzhao Fang et al.

Annual Review of Animal Biosciences, 2025, 13, pp.73-98. ⟨10.1146/annurev-animal-111523-102217⟩

Article dans une revue hal-04802793v1
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Differences in maternal diet fiber content influence patterns of gene expression and chromatin accessibility in fetuses and piglets

Smahane Chalabi , Linda Loonen , Jos Boekhorst , Houcheng Li , Lingzhao Fang et al.

Genomics, 2025, 117 (2), pp.110995. ⟨10.1016/j.ygeno.2025.110995⟩

Article dans une revue hal-04770329v2

The Farm Animal Genotype–Tissue Expression (FarmGTEx) Project

Lingzhao Fang , Jinyan Teng , Qing Lin , Zhonghao Bai , Shuli Liu et al.

Nature Genetics, 2025, ⟨10.1038/s41588-025-02121-5⟩

Article dans une revue hal-04993821v1
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Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues

Fabien Degalez , Mathieu Charles , Sylvain Foissac , Haijuan Zhou , Dailu Guan et al.

Scientific Reports, 2024, 14 (1), pp.6588. ⟨10.1038/s41598-024-56705-y⟩

Article dans une revue hal-04575157v1
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A compendium of genetic regulatory effects across pig tissues

Jinyan Teng , Yahui Gao , Hongwei Yin , Zhonghao Bai , Shuli Liu et al.

Nature Genetics, 2024, 56 (1), pp.112-123. ⟨10.1038/s41588-023-01585-7⟩

Article dans une revue hal-04599954v1
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Intestinal organoids in farm animals

Martin Beaumont , Fany Blanc , Claire Cherbuy , Giorgia Egidy , Elisabetta Giuffra et al.

Veterinary Research, 2021, 52 (1), 15 p. ⟨10.1186/s13567-021-00909-x⟩

Article dans une revue (article de synthèse) hal-03154463v1
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RNA-Seq Data for Reliable SNP Detection and Genotype Calling

Frédéric Jehl , Fabien Degalez , Frédéric Lecerf , Maria Bernard , Laetitia Lagoutte et al.

Frontiers in Genetics, 2021, 12, pp.655707. ⟨10.3389/fgene.2021.655707⟩

Article dans une revue hal-03276149v1
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Editorial: Functional Annotation of Animal Genomes

Amanda Jane Chamberlain , Hans H Cheng , Elisabetta Giuffra , Christa Kuehn , Christopher K Tuggle et al.

Frontiers in Genetics, 2021, 12, pp.768626. ⟨10.3389/fgene.2021.768626⟩

Article dans une revue hal-03379984v1
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Tissue resources for the functional annotation of animal genomes

Michèle Tixier-Boichard , Stéphane Fabre , Sophie Dhorne-Pollet , Adeline Goubil , Hervé Acloque et al.

Frontiers in Genetics, 2021, 12, ⟨10.3389/fgene.2021.666265⟩

Article dans une revue hal-03353872v1
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An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues

Frédéric Jehl , Kévin Muret , Maria Bernard , Morgane Boutin , Laetitia Lagoutte et al.

Scientific Reports, 2020, 10 (1), pp.1-17. ⟨10.1038/s41598-020-77586-x⟩

Article dans une revue hal-03039897v1
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From FAANG to fork: application of highly annotated genomes to improve farmed animal production

Emily Clark , Alan Archibald , Hans Daetwyler , Martien Groenen , Peter Harrison et al.

Genome Biology, 2020, 21 (1), ⟨10.1186/s13059-020-02197-8⟩

Article dans une revue hal-03056514v1
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The mirna-targeted transcriptome of porcine alveolar macrophages upon infection with porcine reproductive and respiratory syndrome virus

Sophie Dhorne-Pollet , Elisa Crisci , Núria Mach , Patricia Renson , Florence Jaffrezic et al.

Scientific Reports, 2019, 9 (1), pp.3160. ⟨10.1038/s41598-019-39220-3⟩

Article dans une revue hal-02573144v1
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Macrophage-B Cell Interactions in the Inverted Porcine Lymph Node and Their Response to Porcine Reproductive and Respiratory Syndrome Virus

Elise Bordet , Maxence Fretaud , Elisa Crisci , Edwige Bouguyon , Stephane Rault et al.

Frontiers in Immunology, 2019, 10, pp.953. ⟨10.3389/fimmu.2019.00953⟩

Article dans une revue hal-02164040v1

Functional Annotation of Animal Genomes (FAANG) : Current Achievements and Roadmap

Elisabetta Giuffra , Christopher K. Tuggle , A.L. Archibald , Hervé Acloque , Amanda J. Chamberlain et al.

Annual Review of Animal Biosciences, 2019, 7 (1), pp.65-88. ⟨10.1146/annurev-animal-020518-114913⟩

Article dans une revue hal-02626183v1
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Multi-species annotation of transcriptome and chromatin structure in domesticated animals

Sylvain Foissac , Sarah Djebali , Kylie Munyard , Nathalie Vialaneix , Andrea Rau et al.

BMC Biology, 2019, 17 (1), 25 p. ⟨10.1186/s12915-019-0726-5⟩

Article dans une revue hal-02437599v1
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Porcine Reproductive and Respiratory Syndrome Virus Type 1.3 Lena Triggers Conventional Dendritic Cells 1 Activation and T Helper 1 Immune Response Without Infecting Dendritic Cells

Elise Bordet , Fany Blanc , Mathieu Tiret , Elisa Crisci , Edwige Bouguyon et al.

Frontiers in Immunology, 2018, 9, pp.2299. ⟨10.3389/fimmu.2018.02299⟩

Article dans une revue hal-02176497v1
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Long noncoding RNA repertoire in chicken liver and adipose tissue

Kévin Muret , Christophe Klopp , Valentin Wucher , Diane Esquerré , Fabrice Legeai et al.

Genetics Selection Evolution, 2017, 49 (1), pp.6. ⟨10.1186/s12711-016-0275-0⟩

Article dans une revue hal-01431420v1
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RNA-sequence analysis of gene expression from honeybees (Apis mellifera) infected with Nosema ceranae

Bouabid Badaoui , Andre Fougeroux , Fabien Petit , Anna Anselmo , Chiara Gorni et al.

PLoS ONE, 2017, 12 (3), ⟨10.1371/journal.pone.0173438⟩

Article dans une revue hal-01604257v1
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GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes

Christopher K Tuggle , Elisabetta Giuffra , Stephen W White , Laura Clarke , Huaijun Zhou et al.

Animal Genetics, 2016, 47 (5), pp.528-533. ⟨10.1111/age.12466⟩

Article dans une revue hal-02912035v1
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Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project.

Leif Andersson , Alan L Archibald , Cynthia D Bottema , Rudiger Brauning , Shane C Burgess et al.

Genome Biology, 2015, 16 (1), pp.57. ⟨10.1186/s13059-015-0622-4⟩

Article dans une revue hal-01194102v1
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A 2.5-kilobase deletion containing a cluster of cine microRNAs in the latency-associated-transcript locus of the pseudorabies virus affects the host response of porcine trigeminal ganglia during established latency

Nada Mahjoub , Sophie Dhorne-Pollet , Walter Fuchs , Marie-Laure M.-L. Endale Ahanda , Elke Lange et al.

Journal of Virology, 2015, 89 (1), pp.428-442. ⟨10.1128/JVI.02181-14⟩

Article dans une revue hal-02631711v1
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Impact of the genetic background on the composition of the chicken plasma MiRNome in response to a stress

Marie-Laure Endale Ahanda , Tatiana Zerjal , Sophie Pollet , Andrea Rau , Amanda Cooksey et al.

PLoS ONE, 2014, 9 (12), pp.1-26. ⟨10.1371/journal.pone.0114598⟩

Article dans une revue hal-01194096v1
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Structural and functional annotation of the porcine immunome

Harry D Dawson , Jane E Loveland , Géraldine Pascal , James G R Gilbert , Hirohide Uenishi et al.

BMC Genomics, 2013, 14, online (may), Non paginé. ⟨10.1186/1471-2164-14-332⟩

Article dans une revue hal-01019897v1

Analyses of pig genomes provide insight into porcine demography and evolution

Martien A. M. Groenen , Alan L. Archibald , Hirohide Uenishi , Christopher K. Tuggle , Yasuhiro Takeuchi et al.

Nature, 2012, 491 (7426), pp.393-398. ⟨10.1038/nature11622⟩

Article dans une revue cea-00880676v1
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Prediction of Altered 3′- UTR miRNA-Binding Sites from RNA-Seq Data: The Swine Leukocyte Antigen Complex (SLA) as a Model Region

Marie-Laure Endale Ahanda , Eric R. Fritz , Jordi Estellé , Zhi-Liang Hu , Ole Madsen et al.

PLoS ONE, 2012, 7, online (11), Non paginé. ⟨10.1371/journal.pone.0048607⟩

Article dans une revue hal-01019035v1
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Co-Expression of Host and Viral MicroRNAs in Porcine Dendritic Cells Infected by the Pseudorabies Virus

Anna Anselmo , Laurence Flori , Florence Jaffrezic , Teresa Rutigliano , Maria Cecere et al.

PLoS ONE, 2011, 6 (3), ⟨10.1371/journal.pone.0017374⟩

Article dans une revue hal-01190510v1
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Strengthening insights into host responses to mastitis infection in ruminants by combining heterogeneous microarray data sources

Sem Genini , Bouabid Badaoui , Gert Sclep , Stephen Bishop , Dave Waddington et al.

BMC Genomics, 2011, 12 (1), pp.225. ⟨10.1186/1471-2164-12-225⟩

Article dans une revue inserm-00601542v1

A large duplication associated with dominant white color in pigs originated by homologous recombination between LINE elements flanking KIT.

Elisabetta Giuffra , S. Marklund , E. Bongcam-Rudloff , Patrick Chardon , J.M.H. Kijas et al.

Mammalian Genome, 2002, 13, pp.569-577

Article dans une revue hal-02679569v1
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Genetic diversity of eleven European pig breeds

Guillaume Laval , N. Iannucelli , Christian Legault , Denis Milan , Martien A.M Groenen et al.

Genetics Selection Evolution, 2000, 32, pp.187-203

Article dans une revue hal-02683681v1
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Genetic diversity of eleven European pig breeds

Guillaume Laval , Nathalie Iannuccelli , Christian Legault , Denis Milan , Martien Groenen et al.

Genetics Selection Evolution, 2000, 32 (2), pp.187-203. ⟨10.1051/gse:2000113⟩

Article dans une revue hal-00894306v1

The origin of the domestic pig: independent domestication and subsequent introgression.

Elisabetta Giuffra , J. M. Kijas , Valérie Amarger , O. Carlborg , J.T. Jeon et al.

Genetics, 2000, 154 (4), pp.1785-91

Article dans une revue hal-02699239v1

A paternally expressed QTL affecting skeletal and cardiac muscle mass in pigs maps to the IGF2 locus.

J. T. Jeon , O. Carlborg , A Törnsten , Elisabetta Giuffra , Valérie Amarger et al.

Nature Genetics, 1999, 21 (2), pp.157-158. ⟨10.1038/5938⟩

Article dans une revue hal-02695367v1

Phylogenetic relationships and introgression patterns between incipient parapatric species of Italian brown trout (Salmo trutta L. complex)

Elisabetta Giuffra , René R. Guyomard , G. Forneris

Molecular Ecology, 1996, 5, pp.207-220

Article dans une revue hal-02687096v1

Mitochondrial control region and protein coding genes sequence variation among phenotypic forms of brown trout Salmo trutta from northern Italy

Elisabetta Giuffra , L. Bernatchez , René R. Guyomard

Molecular Ecology, 1994, 3, pp.161-171

Article dans une revue hal-02712184v1

RNA-seq data for detecting reliable SNPs & genotypes in livestock species: interest for coding variant characterization and cis-regulation analysis by allele-specific expression !

Frédéric Jehl , Fabien Degalez , Maria Bernard , Frédéric Lecerf , Laetitia Lagoutte et al.

World Poultry Congress (WPC) 2022, Aug 2022, Paris, France

Communication dans un congrès hal-04258396v1

The EU-H2020 Project GENE-Switch (The regulatory GENomE of SWine and CHicken: functional annotation during development)

Elisabetta Giuffra

The Plant and Animal Genome XXVII Conference (PAG), Jan 2020, San Diego, United States

Communication dans un congrès hal-03364331v1
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An atlas of chicken long non-coding RNAs gathering multiple sources : gene models and expression across more than twenty tissues

Frédéric Jehl , Kévin Muret , Maria Bernard , Diane Esquerré , Hervé Acloque et al.

PAG XXVII - Plant & Animal Genome Conference, Jan 2019, San Diego, United States

Communication dans un congrès hal-02790912v1

Chromatin accessibility conservation across four livestock species

Sarah Djebali Quelen , Sylvain Foissac , Nathalie Vialaneix , Kylie Munyard , Andrea Rau et al.

Conference of the International Society for Animal Genetics (ISAG 2019), Jul 2019, Llieda, Spain

Communication dans un congrès hal-02788732v1

FR-Agencode: An Update

Elisabetta Giuffra , Sarah Djebali , Andrea Rau , Sandrine Lagarrigue , Hervé Acloque et al.

The Plant and Animal Genome XXVII Conference (PAG), Jan 2019, San Diego, United States

Communication dans un congrès hal-03364351v1

Functional annotation of livestock genomes: chromatin structure and regulation of gene expression

Sylvain Foissac , Sarah Djebali , Kylie Munyard , Nathalie Vialaneix , Andrea Rau et al.

ASAS/ASDS Midwest Joint Meeting, Mar 2019, Omaha, United States. ⟨10.1093/jas/skz122.028⟩

Communication dans un congrès hal-02735898v1

Multi-level conservation of chromosome conformation across livestock species reveals evolutionary links between genome structure and function

Sylvain Foissac , Sarah Djebali Quelen , Nathalie Vialaneix , Matthias Zytnicki , Andrea Rau et al.

Conference of the International Society for Animal Genetics (ISAG 2019), Jul 2019, Lleida, Spain

Communication dans un congrès hal-02788476v1

Introduction to functional annotation of animal genomes consortium

Christopher Tuggle , Elisabetta Giuffra

2019 ASAS Midwest Meeting, American Society of Animal Science (ASAS); American Dairy Science Association (ADSA), Jul 2019, Inconnue, France. pp.17, ⟨10.1093/jas/skz122.031⟩

Communication dans un congrès hal-03178046v1

Generating 3D organoid-like structures from porcine induced pluripotent-like cells in vitro.

Elisabetta Giuffra , Hervé Acloque , Giorgia Egidy , Nico Taverne , Anya Taverne-Thiele et al.

11. Symposium of the French Domestic Animal Immunology Network,, Mar 2018, Tours, France

Communication dans un congrès hal-02918626v1

Profiling the landscape of transcription and chromatin conformation reveals regulatory mechanisms involved in immune and metabolic functions

Sylvain Foissac , Sarah Djebali Quelen , Hervé Acloque , Marie-Hélène Pinard-van Der Laan , Sandrine Lagarrigue et al.

3. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2017, Jouy-en-Josas, France

Communication dans un congrès hal-01603057v1
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RNA silencing-targeted transcriptome of porcine alveolar macrophages upon infection with porcine reproductive and respiratory syndrome viruses (PRRSV) of different virulence

Sophie Dhorne-Pollet , Patricia Renson , Florence Jaffrezic , Guillemette Marot , Marco M. Moroldo et al.

35. Conference of the International Society for Animal Genetics (ISAG), Jul 2016, Salt Lake City, Utah, United States. 197 p

Communication dans un congrès hal-02740229v1

Functional Analysis of microRNAs:mRNA Interactions Between Pseudorabies Virus (PrV) and Its Natural Pig Host

Sophie Pollet , Guillemette Marot , Jerôme Lecardonnel , Marco Moroldo , Florence Jaffrezic et al.

24. Plant and Animal Genome Conference (PAG), Jan 2016, San Diego, United States

Communication dans un congrès hal-01606998v1

Perspective of FAANG (Functional Annotation of Animal Genomes)

Elisabetta Giuffra

AGRI Research workshops, Oct 2016, Bruxelles, Belgium

Communication dans un congrès hal-01605576v1

Chromatin Accessibility in Porcine Liver, Spleen and Circulating Immune Cells

Sylvain Foissac , Kylie Munyard , Adeline Goubil , Silvia Vincent-Naulleau , Diane Esquerre et al.

XXIV PAG - Plant and Animal Genome Conference, Jan 2016, San Diego, United States

Communication dans un congrès hal-01532588v1

Chromatin accessibility in the liver and circulating immune cells of pigs, cattle, goats and chickens

Elisabetta Giuffra , . Fr-Agencode Consortium

Livestock Genomics Workshop, Sep 2016, Cambridge, United Kingdom

Communication dans un congrès hal-01607950v1

Investigating the nuclear spatial conformation of livestock genomes using Hi-C

Sylvain Foissac , Hervé Acloque , Florence Mompart , Diane Esquerre , David Robelin et al.

NGS'16 Genome Annotation, Apr 2016, Barcelone, Spain

Communication dans un congrès hal-01581540v1

Chromatin accessibility in the liver and circulating immune cells of pigs, goats and chickens

Elisabetta Giuffra , Kylie Munyard , Adeline Goubil , Silvia Vincent-Naulleau , Diane Esquerre et al.

35. Conference of the International Society for Animal Genetics (ISAG), Jul 2016, Salt Lake City, United States. ⟨10.2134/jas2016.94supplement471a⟩

Communication dans un congrès hal-01533947v1

Profiling the Nuclear Spatial Conformation of Livestock Genomes in Cell Lines and Liver Cells

Sylvain Foissac , Hervé Acloque , Florence Mompart , Diane Esquerre , David Robelin et al.

PAG XXIV - Plant and Animal Genome Conference, Jan 2016, San Diego, United States. Non paginé

Communication dans un congrès hal-01508146v1

The Functional Annotation of Animal Genomes (FAANG) Initiative

Elisabetta Giuffra , Sylvain Foissac , Ole Madsen , Martien Groenen , Richard Crooijmans et al.

Plant and Animal Genome (PAG), Jan 2015, San Diego, United States

Communication dans un congrès hal-01194056v1
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Les microARN circulants : de nouveaux biomarqueurs pour des caractères économiquement importants chez les poules ?

Tatiana Zerjal , Marie-Laure Endale Ahanda , Sophie Pollet , Andrea Rau , Elisabetta Giuffra

11. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. pp.1-5

Communication dans un congrès hal-01194121v1

FR-AgENCODE: A Pilot Project to Improve the Functional Annotation of Livestock Genomes

Sylvain Foissac , Elisabetta Giuffra

Plant and Animal Genome (PAG), Jan 2015, San Diego, United States

Communication dans un congrès hal-01194055v1

Update on the Functional Annotation of ANimal Genomes (FAANG) initiative

Elisabetta Giuffra

Final RGB-Net Meeting and 6th Rabbit Biotechnology Meeting, Nov 2015, Lyon, France

Communication dans un congrès hal-01602315v1

Impact of the genetic background on the composition of the chicken plasma miRNome in response to a stress

Elisabetta Giuffra

Livestock genomics workshop, European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI). GBR., Sep 2014, Cambridge, United Kingdom

Communication dans un congrès hal-01602316v1
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Functional analysis of candidate interactions between miRNAs encoded by the pseudorabies virus (PrV) and pig genes.

Nada Mahjoub , Sophie Pollet , Gail Sherba , Thomas Mettenleiter , Elisabetta Giuffra

34. International Society for Animal Genetics Conference (ISAG), Jul 2014, Xi'An, China

Communication dans un congrès hal-01606096v1

MicroRNA technology, relevance and application

Elisabetta Giuffra

EADGENE-S final meeting, May 2013, Bruxelles, Belgium

Communication dans un congrès hal-01602318v1
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Functional genomics of Pseudorabies in pigs: a model for host-pathogen interaction studies

Nada N. Mahjoub , Elisabetta Giuffra

15. Séminaire des Thésards du département Génétique Animale, Institut National de la Recherche Agronomique (INRA). Paris, FRA., Mar 2012, Ile d'Oléron, France. pp.1

Communication dans un congrès hal-01000389v1
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MiRNA targeting in host-virus interaction: inter-strain comparison in Pseudorabies Virus (PrV)

Marie-Laure Endale Ahanda , Thomas Letellier , Elisabetta Giuffra

33. Conference of the International Society of Animal Genetics, Cairns Conference. Cairns, AUS., Jul 2012, Cairns, Australia. 1 p

Communication dans un congrès hal-01019836v1

In silico prediction of microRNAs targeting alleles of the Swine Leukocyte Antigen complex

Marie-Laure M.-L. Endale Ahanda , Zhi-Liang Hu , Jordi Estellé , Eric R. Fritz , Claire Rogel Gaillard et al.

ISAFG 2011, Oct 2011, Dublin, Ireland

Communication dans un congrès hal-02803523v1
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Community annotation of immunity-related genes in the pig genome

Christopher K. Tuggle , Claire Gaillard , Jane Loveland , Hirohide Uenishi , Harry Dawson et al.

4. International Symposium on Animal Functional Genomics, Oct 2011, Dublin, Ireland

Communication dans un congrès hal-01193966v1

microRNA target prediction and 3'UTR polymorphism in swine

Marie-Laure M.-L. Endale Ahanda , Zhi-Liang Z.-L. Hu , Jordi Estellé , Eric R. E. R. Fritz , Claire Gaillard et al.

RNAi World Congress, Apr 2011, Boston, United States

Communication dans un congrès hal-01000372v1

miRNA discovery in Sus scrofa and in the Pseudorabies virus through a deep sequencing approach

Anna Anselmo , Laurence Flori , Naima Cortes-Perez , F. Lefevre , Claire Gaillard et al.

Pig Genome III Conference, A celebration for completing the pig genome sequence, 2009, Hinxton, United States

Communication dans un congrès hal-01193416v1

Exploring the host-virus miRNAs regulation layer: pig dendritic cells (DCs) infected by PrV (Pseudorabies virus)

Valentina Mariani , R. Malinverni , S. Genini , Naima G. Cortes-Perez , Laurence Flori et al.

EADGENE, Mar 2008, Liège, Belgium. n.p

Communication dans un congrès hal-02812828v1

Exploring the host-virus miRNA regulation layer: pig dendritic cells (DCs) infected by PrV (pseudorabies virus)

V. Mariani , Laurence Flori , Roberto Malinverni , F. Lefevre , Sem Genini et al.

Pig Genome II Conference, 2008, Ljubljana, Slovenia

Communication dans un congrès hal-02814829v1

Towards a genomic platform for analysis of wild boar and suiforme diversity and evolution.

R.P.M.A. Crooijmans , T. Baxter , S. Casu , K. Chen , A. Ducos et al.

7th International Symposium on Wild Boar (Sus scrofa) and on Sub-order Suiformes, 2008, Sopron, pp.Inconnu

Communication dans un congrès hal-02822635v1
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Setting up transfection protocols on porcine gut organoids

Celia Carbonne , Jean-Luc Coville , Giorgia Egidy , Elisabetta Giuffra

3D models in Biology Symposium, Jun 2024, Domaine du Haut-Carré, Talence, France

Poster de conférence hal-04674903v1
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Setting up transfection protocoles on porcine gut organoids

Celia Carbonne , Jean-Luc Coville , Giorgia Egidy , Elisabetta Giuffra

Livestock genomics, Mar 2024, Online, France

Poster de conférence hal-04674868v1

Integrative analyses of chromosome conformation, chromatin accessibility and gene expression in human and livestock genomes

Camille Mestre , Sarah Djebali Quelen , Thomas Faraut , Nathalie Vialaneix , Andrea Rau et al.

European Conference on Computational Biology (ECCB 2018), Sep 2018, Athènes, Greece. , 2018

Poster de conférence hal-02784857v1

Integrative and differential analysis of transcriptomes and chromatin accessibility regions reveals regulatory mechanisms involved in pig immune and metabolic functions

Sarah Djebali Quelen , Kylie Munyard , Nathalie Villa-Vialaneix , Cédric Cabau , Andrea Rau et al.

36th International Society for Animal Genetics Conference, Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book

Poster de conférence hal-01603033v1
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Long-non coding RNAs repertoires in liver and two T lymphocyte cell types in four livestock species

Kévin Muret , Sarah Djebali Quelen , Thomas Derrien , Cédric Cabau , Christophe Klopp et al.

36. Conference of the International Society for Animal Genetics (ISAG), Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book

Poster de conférence hal-01621915v1

Une nouvelle facette du génome de poule : les genes “longs non-codants

Kévin Muret , Christophe Klopp , Valentin Wucher , Diane Esquerre , Fabrice Legeai et al.

12. Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, Apr 2017, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 2017, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras

Poster de conférence hal-01605848v1
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Profiling the landscape of transcription, chromatin accessibility and chromosome conformation of cattle, pig, chicken and goat genomes [FAANG pilot project]

Sylvain Foissac , Sarah Djebali Quelen , Hervé Acloque , Philippe Bardou , Fany Blanc et al.

36th International Society for Animal Genetics Conference, Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book

Poster de conférence hal-01608449v1

Long-non coding RNAs repertoire in liver and adipose tissue in chicken

Kévin Muret , Christophe Klopp , Valentin Wucher , Diane D. Esquerre , Fabrice Legeai et al.

XXIV International Plant & Animal Genome (Pag), Jan 2016, San Diego, United States. 2016

Poster de conférence hal-02799305v1

Sampling tissue for FAANG: the example of cattle and chickens in France

Michèle Tixier-Boichard , Stéphane Fabre , Sophie Dhorne-Pollet , Emmanuelle Rebours , Adeline Goubil et al.

GO-FAANG Workshop, Oct 2015, Washington DC, United States. , 1 p., 2015

Poster de conférence hal-02801142v1

miRNA-mediated regulation: learning from Pseudorabies virus infected pigs

Elisabetta Giuffra

International Plant & Animal Genome XXII (PAG), Jan 2014, San Diego, United States. 2014

Poster de conférence hal-01602317v1
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Understanding the complex interaction between pseudorabies virus (PrV) and its natural host using RIP-Chip enrichment analysis

Sophie Pollet , Jerôme Lecardonnel , Florence Jaffrezic , Marco Moroldo , Elisabetta Giuffra

34. International Society for Animal Genetics Conference (ISAG), Jul 2014, Xi'An, China. 2014, Proceedings of the 34th International Society for Animal Genetics Conference

Poster de conférence hal-01603396v1

Structural and functional annotation of immunity-related genes in the pig genome

Chris Tuggle , Claire Rogel Gaillard , Jane E Loveland , Hirohide Uenishi , Harry D Dawson et al.

20. Plant and Animal Genome Conference, Jan 2012, San Diego, United States. 2012

Poster de conférence hal-02745739v1
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Annotation of the immunity-related genes in the pig genome

. Immune Response Annotation Group (irag) , Claire Rogel Gaillard , Christopher K. Tuggle , Jane Loveland , Jennifer Harrow et al.

32nd Conference of the International Society of Animal Genetics (ISAG), Jul 2010, Edinburgh, United Kingdom. 2010

Poster de conférence hal-02821666v1
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GENE-SWitCH - Book of Abstracts

Elisabetta Giuffra

Consortium H2020 GENE-SWitCH. 2023

Rapport (rapport d’expertise collective) hal-04674884v1

Implementing a program of host genomics of key host-pathogen systems in livestock

Elisabetta Giuffra

Life Sciences [q-bio]. Université de Versailles Saint-Quentin-en-Yvelines, 2014

HDR tel-02797687v1