Francis Repoila

42
Documents

Publications

Publications

Synthesis: Enterococcus cecorum, an opportunistic pathogen of poultry: Learning more about to better control it on the farms

Rozenn Souillard , Jeanne Laurentie , Francis Repoila , Isabelle Kempf , Pascale Serror
Animal - science proceedings, Jul 2024, Tours, France. ⟨10.1016/j.anscip.2024.06.052⟩
Communication dans un congrès hal-04862894 v1

Enterococcus cecorum, un agent pathogène opportuniste des volailles : mieux le connaitre pour une meilleure maitrise en élevage

Rozenn Souillard , Jeanne Laurentie , Francis Repoila , Isabelle Kempf , Pascale Serror
15. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2024, Tours, France. pp.102-110
Communication dans un congrès hal-04547075 v1

Deciphering regulatory networks of the fish pathogen Flavobacterium psychrophilum by primary transcriptome mapping

Tatiana Rochat , Cyprien Guerin , Erwin van Dijk , Brigitte Kerouault , Bogdan Mirauta et al.
4. International Conference on Flavobacterium - Flavobacterium 2015, Oct 2015, Auburn, United States
Communication dans un congrès hal-01535372 v1

Deciphering regulatory networks of the salmonid fish pathogen flavobacterium psychrophilum by primary transcriptome mapping

Tatiana Rochat , Cyprien Guerin , Erwin van Dijk , Brigitte Kerouault , Claude Thermes et al.
6. Congress of European Microbiologist FEMS 2015, Jun 2015, Maastricht, Netherlands
Communication dans un congrès hal-01204480 v1

Prophage-crosstalk and prophage-associated cytotoxicity in Enterococcus faecalis v583

Renata Filipa Cruz de Matos , Naima G Cortes-Perez , Nicolas N. Lapaque , Albertas Navickas , Thierry Meylheuc et al.
Journées des Microbiologistes de l’INRA, Nov 2012, L’Isle-sur-la-Sorgue, France
Communication dans un congrès hal-03584441 v1

E coli producteurs de Shiga-toxines : évaluation du risque zoonotique et spécificité d’hôte

Christine Martin , Eric Oswald , Francis Repoila , Yolande Bertin , Mh Laaberki et al.
Journées d’Animation Scientifique du Département de Santé Animale, 2003, Evian, France. pp.Inconnu
Communication dans un congrès hal-02828926 v1
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Comparative Genome Analysis of Enterococcus cecorum Reveals Intercontinental Spread of a Lineage of Clinical Poultry Isolates

Jeanne Laurentie , Valentin Loux , Christelle Hennequet-Antier , Emilie Chambellon , Julien Deschamps et al.
MSphere, 2023, 8 (2), pp.e0049522. ⟨10.1128/msphere.00495-22⟩
Article dans une revue hal-04004063 v1
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Adaptation of the gut pathobiont Enterococcus faecalis to deoxycholate and taurocholate bile acids

Francis Repoila , F. Le Bohec , C. Guérin , C. Lacoux , S. Tiwari et al.
Scientific Reports, 2022, 12 (1), pp.8485. ⟨10.1038/s41598-022-12552-3⟩
Article dans une revue pasteur-03689605 v1
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Transcriptome architecture and regulation at environmental transitions in flavobacteria: the case of an important fish pathogen

Cyprien Guérin , Bo-Hyung Lee , Benjamin Fradet , Erwin van Dijk , Bogdan Mirauta et al.
ISME Communications, 2021, 1 (1), ⟨10.1038/s43705-021-00029-9⟩
Article dans une revue hal-03356343 v1
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RNA and gene control in bacteria

Maude Guillier , Francis Repoila
Biochimica et Biophysica Acta - Gene Regulatory Mechanisms , 2020, 1863 (9), pp.194602. ⟨10.1016/j.bbagrm.2020.194602⟩
Article dans une revue hal-03006512 v1
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Dynamic insights on transcription initiation and RNA processing during bacterial adaptation

Caroline Lacoux , Aymeric Fouquier d'Hérouël , Françoise Wessner-Le Bohec , Nicolas Innocenti , Chantal Bohn et al.
RNA, 2020, 26 (4), pp.382-395. ⟨10.1261/rna.073288.119⟩
Article dans une revue hal-02464291 v1
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Termination factor Rho: From the control of pervasive transcription to cell fate determination in Bacillus subtilis.

Vladimir Bidnenko , Aleksandra Grylak-Mielnicka , Pierre Nicolas , Olivier Delumeau , Sandrine Auger et al.
PLoS Genetics, 2017, 13 (7), 47 p. ⟨10.1371/journal.pgen.1006909⟩
Article dans une revue hal-01608054 v1
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Fresh layers of RNA-mediated regulation in Gram-positive bacteria

Philippe Bouloc , Francis Repoila
Current Opinion in Microbiology, 2016, 30, pp.30 - 35. ⟨10.1016/j.mib.2015.12.008⟩
Article dans une revue hal-01412635 v1

Detection and quantitative estimation of spurious double stranded DNA formation during reverse transcription in bacteria using tagRNA-seq

Nicolas Innocenti , Francis Repoila , Erik Aurell
RNA Biology, 2015, 12 (9), pp.1067-1069. ⟨10.1080/15476286.2015.1071010⟩
Article dans une revue hal-02631642 v1
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Whole-genome mapping of 5' RNA ends in bacteria by tagged sequencing: a comprehensive view in Enterococcus faecalis.

Nicolas Innocenti , Monica Golumbeanu , Aymeric Fouquier d'Hérouël , Caroline Lacoux , Rémy A Bonnin et al.
RNA, 2015, 21 (5), pp.1018-30. ⟨10.1261/rna.048470.114⟩
Article dans une revue hal-01464834 v1
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Regulatory crosstalk between type I and type II toxin-antitoxin systems in the human pathogen Enterococcus faecalis

Francoise Wessner , Caroline Lacoux , Nathalie Goeders , Aymeric Fouquier d'Herouel , Renata Filipa Cruz de Matos et al.
RNA Biology, 2015, 12 (10), pp.1099-1108. ⟨10.1080/15476286.2015.1084465⟩
Article dans une revue hal-01536512 v1

Enterococcal Rgg-Like Regulator ElrR Activates Expression of the elrA Operon

Romain R. Dumoulin , Naima N. Bermudez , Stephane S. Gaubert , Philippe P. Duhutrel , Sophie S. Brinster et al.
Journal of Bacteriology, 2013, 195 (13), pp.3073 - 3083. ⟨10.1128/JB.00121-13⟩
Article dans une revue hal-01001022 v1

Gene expression control by selective RNA processing and stabilization in bacteria.

Tatiana Rochat , Philippe Bouloc , Francis Repoila
FEMS Microbiology Letters, 2013, 344 (2), pp.104-13. ⟨10.1111/1574-6968.12162⟩
Article dans une revue hal-00848172 v1
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Enterococcus faecalis prophage dynamics and contributions to pathogenic traits

Renata Filipa Cruz de Matos , Nicolas Lapaque , Lionel Rigottier-Gois , Laurent Debarbieux , Thierry Meylheuc et al.
PLoS Genetics, 2013, 9 (6), ⟨10.1371/journal.pgen.1003539⟩
Article dans une revue hal-01190746 v1
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A simple and efficient method to search for selected primary transcripts: non-coding and antisense RNAs in the human pathogen Enterococcus faecalis

Aymeric A. Fouquier d'Herouel , Francoise F. Wessner , David D. Halpern , Joseph J. Ly-Vu , Sean S. Kennedy et al.
Nucleic Acids Research, 2011, 39 (7), pp.E46 - U88. ⟨10.1093/nar/gkr012⟩
Article dans une revue hal-01001011 v1

Small regulatory non-coding RNAs in bacteria: physiology and mechanistic aspects

Francis Repoila , Fabien Darfeuille
Biology of the Cell, 2009, 101 (2), pp.117-131. ⟨10.1042/BC20070137⟩
Article dans une revue hal-02666535 v1

A trans-Acting Riboswitch Controls Expression of the Virulence Regulator PrfA in Listeria monocytogenes

Edmund Loh , Olivier Dussurget , Jonas Gripenland , Karolis Vaitkevicius , Teresa Tiensuu et al.
Cell, 2009, 139 (4), pp.770-779. ⟨10.1016/j.cell.2009.08.046⟩
Article dans une revue hal-02668223 v1

Small noncoding RNAs controlling pathogenesis

Alejandro Toledo-Arana , Francis Repoila , Pascale Cossart
Current Opinion in Microbiology, 2007, 10 (2), pp.182-188. ⟨10.1016/j.mib.2007.03.004⟩
Article dans une revue istex hal-02668138 v1
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Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets

Pierre Mandin , Francis Repoila , Massimo Vergassola , Thomas Geissmann , Pascale Cossart
Nucleic Acids Research, 2007, 35 (3), pp.962-974. ⟨10.1093/nar/gkl1096⟩
Article dans une revue hal-02665638 v1

Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets.

P. Mandin , Francis Repoila , M. Vergassola , T. Geissmann , P. Cossart
Nucleic Acids Research, 2007, p. 1-13
Article dans une revue hal-00129258 v1

Concert of regulators to switch on LEE expression in enterohemorrhagic Escherichia coli O157 : H7: Interplay between Ler, GrlA, HNS and RpoS

Maria-Halima Laaberki , Nazila Janabi , Eric Oswald , Francis Repoila
International Journal of Medical Microbiology, 2006, 296 (4-5), pp.197-210. ⟨10.1016/j.ijmm.2006.02.017⟩
Article dans une revue istex hal-02658911 v1

Temperature sensing by the dsrA promoter

Francis Repoila , S. Gottesman
Journal of Bacteriology, 2003, 185 (22), pp.6609-6614
Article dans une revue hal-02670654 v1

Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm

Francis Repoila , N. Majdalani , S. Gottesman
Molecular Microbiology, 2003, 48 (4), pp.855-861
Article dans une revue hal-02681108 v1

Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm

Francis Repoila , N Majdalani , S Gottesman
Molecular Microbiology, 2003, 48 (4), pp.855-861
Article dans une revue hal-02672744 v1
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Identification of novel small RNAs using comparative genomics and microarrays

Karen M. Wassarman , Francis Repoila , Carsten Rosenow , Gisela Storz , Susan Gottesman
Genes and Development, 2001, 15 (13), pp.1637-51. ⟨10.1101/gad.901001⟩
Article dans une revue hal-02680801 v1

Small RNA regulators of translation: mechanisms of action and approaches for identifying new small RNAs

Susan Gottesman , Gizela Storz , Carsten Rosenow , N Majdalani , Francis Repoila et al.
Cold Spring Harbor Symposia on Quantitative Biology, 2001, 66, pp.353-62
Article dans une revue hal-02677966 v1

Signal transduction cascade for regulation of RpoS: temperature regulation of DsrA.

Francis Repoila , S Gottesman
Journal of Bacteriology, 2001, 183 (13), pp.4012-4023. ⟨10.1128/JB.183.13.4012-4023.2001⟩
Article dans une revue hal-02678462 v1

Involvement of differential efficiency of transcription by esigmas and esigma70 RNA polymerase holoenzymes in growth phase regulation of the Escherichia coli osmE promoter

Patricia Bordes , Francis Repoila , Annie Kolb , C. Gutierrez
Molecular Microbiology, 2000, 35 (4), pp.845-853. ⟨10.1046/j.1365-2958.2000.01758.x⟩
Article dans une revue hal-02697171 v1

The genome of the pseudo T-even bacteriophages, a diverse group that resembles T4

C. Monod , Francis Repoila , M. Kutateladze , F. Tetart , H. M. Krisch
Journal of Molecular Biology, 1997, 267 (2), pp.237-49. ⟨10.1006/jmbi.1996.0867⟩
Article dans une revue istex hal-02697687 v1

Bacteriophage T4 host range is expanded by duplications of a small domain of the tail fiber adhesin

F. Tetart , Francis Repoila , C. Monod , H. M. Krisch
Journal of Molecular Biology, 1996, 258 (5), pp.726-31. ⟨10.1006/jmbi.1996.0281⟩
Article dans une revue istex hal-02699219 v1

Genomic polymorphism in the T-even bacteriophages

Francis Repoila , F Tétart , Jean-Yves Bouet , H M Krisch
EMBO Journal, 1994, 13 (17), pp.4181-4192
Article dans une revue hal-02712040 v1

Direct PCR sequencing of the ndd gene of bacteriophage T4: identification of a product involved in bacterial nucleoid disruption

Jean-Yves Bouet , J. Woszczyk , Francis Repoila , V. François , J. M. Louarn et al.
Gene, 1994, 141 (1), pp.9-16. ⟨10.1016/0378-1119(94)90121-X⟩
Article dans une revue istex hal-02713863 v1

Osmotic induction of the periplasmic trehalase in Escherichia coli K12: characterization of the treA gene promoter

Francis Repoila , C Gutierrez
Molecular Microbiology, 1991, 5 (3), pp.747-55. ⟨10.1111/j.1365-2958.1991.tb00745.x⟩
Article dans une revue hal-02715213 v1

RNA-mediated control of bacterial gene expression: role of regulatory non-coding RNAs

Pierre Mandin , Alejandro Toledo-Arana , Aymeric Fouquier d'Herouel , Francis Repoila
RNA Regulation, Wiley-Blackwell, 2014, Advances in Molecular Bioloy and Medicine, 978-3-527-66865-6. ⟨10.1002/3527600906.mcb.201200016⟩
Chapitre d'ouvrage hal-01594812 v1

Non-coding RNAs, another class of regulatory molecules

M.H. Laaberki , Francis Repoila
Recent Research Developments in Molecular Biology, Research Signpost, 2003, 81-271-0032-3
Chapitre d'ouvrage hal-02831238 v1

Non-coding RNAs, another class of regulatory molecules

Mh Laaberki , Francis Repoila
Recent Research Developments in Molecular Biology, Research Signpost, 2003, 81-271-0032-3
Chapitre d'ouvrage hal-02825219 v1