gregoire Le Provost

Chargé de Recherches
80 %
Libre accès
54
Documents
Affiliation actuelle
  • Biodiversité, Gènes & Communautés (BioGeCo)

Présentation

Co-leader of the Xylomes team.

My research interest use functional genomics (from transcriptome to epigenome) to dissect complex traits of ecological importance (bud phenology and response to abiotic stress) in European white oaks.

Domaines de recherche

Sciences de l'environnement

Compétences

biologie molèculaire, épigénétique, arbres forestiers.

Publications

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Publications

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A Strategy for Studying Epigenetic Diversity in Natural Populations: Proof of Concept in Poplar and Oak

Isabelle Lesur Kupin , Odile Rogier , Mamadou Dia Sow , Christophe Boury , Alexandre Duplan et al.

Journal of Experimental Botany, 2024, 75 (18), pp.5568-5584. ⟨10.1093/jxb/erae266⟩

Article dans une revue hal-04621404v1
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Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology

Gregoire Le Provost , Céline Lalanne , Isabelle Lesur , Jean-Marc Louvet , Sylvain Delzon et al.

BMC Plant Biology, 2023, 23 (108), ⟨10.1186/s12870-023-04069-2⟩

Article dans une revue hal-04003618v1
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Between but Not Within-Species Variation in the Distribution of Fitness Effects

Jennifer James , Chedly Kastally , Katharina B Budde , Santiago C. Gonzalez-Martinez , Pascal Milesi et al.

Molecular Biology and Evolution, 2023, 40 (11), ⟨10.1093/molbev/msad228⟩

Article dans une revue hal-04598142v1
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Microbial biomarkers of tree water status for next‐generation biomonitoring of forest ecosystems

Marine C Cambon , Marine Trillat , Isabelle Lesur‐kupin , Régis Burlett , Emilie Chancerel et al.

Molecular Ecology, 2023, 32 (22), pp.5944-5958. ⟨10.1111/mec.17149⟩

Article dans une revue hal-04272156v1
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Molecular plasticity to soil water deficit differs between sessile oak (Quercus Petraea (Matt.) Liebl.) high- and low-water use efficiency genotypes.

Gregoire Le Provost , Theo Gerardin , Christophe Plomion , Oliver Brendel Article dans une revue hal-03739690v1
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Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints

Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie et al.

Plant Physiology, 2022, 190 (4), pp.2466-2483. ⟨10.1093/plphys/kiac420/6692722⟩

Article dans une revue hal-03771214v1
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A Chromosome-level genome assembly of the European Beech (Fagus sylvatica) reveals anomalies for organelle DNA integration, repeat Content and distribution of SNPs

Bagdevi Mishra , Bartosz Ulaszewski , Joanna Meger , Jean-Marc Aury , Catherine Bodénès et al.

Frontiers in Genetics, 2022, 12, pp.691058. ⟨10.3389/fgene.2021.691058⟩

Article dans une revue hal-03602006v1
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Genetic signatures of divergent selection in European beech ( Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range

Dragos Postolache , Sylvie Oddou-Muratorio , Elia Vajana , Francesca Bagnoli , Erwan Guichoux et al.

Molecular Ecology, 2021, 30, pp.5029-5047. ⟨10.1111/mec.16115⟩

Article dans une revue hal-03338410v1
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High-quality SNPs from genic regions highlight introgression patterns among European white oaks (Quercus petraea and Q. robur)

Tiange Lang , Pierre P. Abadie , Valérie Léger , Thibaut Decourcelle , Jean-Marc Frigerio et al.

Peer Community In Forest & Wood Sciences, 2021, pp.1-33. ⟨10.1101/388447⟩

Article dans une revue hal-01985021v1
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Expression profiles of 11 candidate genes involved in drought tolerance of pedunculate oak (Quercus robur L.). Possibilities for genetic monitoring of the species.

Branislav Trudić , Gordon Draškić , Grégoire Le Provost , Srđan Stojnić , Andrej Pilipović et al.

Silvae Genetica, 2021, 70 (1), pp.226 - 234. ⟨10.2478/sg-2021-0020⟩

Article dans une revue hal-03552212v1
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The GenTree Leaf Collection: Inter‐ and intraspecific leaf variation in seven forest tree species in Europe

Raquel Benavides , Bárbara Carvalho , Cristina Bastias , David López‐quiroga , Antonio Mas et al.

Global Ecology and Biogeography, 2021, 30 (3), pp.590-597. ⟨10.1111/geb.13239⟩

Article dans une revue (data paper) hal-03282266v1

Higher needle anatomic plasticity is related to better water-use efficiency and higher resistance to embolism in fast-growing Pinus pinaster families under water scarcity

Didier Bert , Grégoire Le Provost , Sylvain Delzon , Christophe Plomion , Jean-Marc Gion

Trees - Structure and Function, 2021, 35, pp.287-306. ⟨10.1007/s00468-020-02034-2⟩

Article dans une revue hal-02964038v1
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The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species

Lars Opgenoorth , Benjamin Dauphin , Raquel Benavides , Katrin Heer , Paraskevi Alizoti et al.

GigaScience, 2021, 10 (3), pp.giab010. ⟨10.1093/gigascience/giab010⟩

Article dans une revue (data paper) hal-03282821v1
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Adaptive introgression as a driver of local adaptation to climate in European white oaks

Thibault Leroy , Jean-Marc Louvet , Céline Lalanne , Grégoire Le Provost , Karine Labadie et al.

New Phytologist, 2020, 226 (4), pp.1171-1182. ⟨10.1111/nph.16095⟩

Article dans une revue hal-02627923v1
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Author Correction: The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe

Elisabet Martínez-Sancho , Lenka Slámová , Sandro Morganti , Claudio Grefen , Barbara Carvalho et al.

Scientific Data , 2020, 7 (1), ⟨10.1038/s41597-020-0447-1⟩

Article dans une revue hal-03282224v1
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Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers

Thibault Leroy , Quentin Rougemont , Jean-Luc Dupouey , Catherine Bodenes , Céline Lalanne et al.

New Phytologist, 2019, online fisrt, pp.1-15. ⟨10.1111/nph.16039⟩

Article dans une revue hal-02622295v1
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Hardwood tree genomics: unlocking woody plant biology

Gerald A. Tuskan , Andrew T. Groover , Jeremy Schmutz , Stephen Paul Difazio , Alexander Myburg et al.

Frontiers in Plant Science, 2018, 9, pp.1-9. ⟨10.3389/fpls.2018.01799⟩

Article dans une revue hal-02622509v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat et al.

Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩

Article dans une revue hal-01820559v1

Implication of the suberin pathway in adaptation to waterlogging and hypertrophied lenticels formation in pedunculate oak (Quercus robur L.)

Grégoire Le Provost , Isabelle Lesur Kupin , Céline Lalanne , Corinne da Silva , Karine Labadie et al.

Tree Physiology, 2016, 36 (11), pp.1330-1342. ⟨10.1093/treephys/tpw056⟩

Article dans une revue hal-01602423v1

Genomic resources notes accepted 1 August 2015 - 31 September 2015

. Genomic Resources Development Consortium , Annegret Kohler , Antoine Kremer , Grégoire G. Le Provost , Isabelle Lesur Kupin Lesur et al.

Molecular Ecology Resources, 2016, 16 (1), pp.377-377. ⟨10.1111/1755-0998.12482⟩

Article dans une revue istex hal-02630738v1
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Forest tree genomics: 10 achievements from the past 10 years and future prospects

Christophe Plomion , Catherine Bastien , Marie-Béatrice Bogeat-Triboulot , Laurent Bouffier , Annabelle Déjardin et al.

Annals of Forest Science, 2016, 73 (1), pp.77-103. ⟨10.1007/s13595-015-0488-3⟩

Article dans une revue (article de synthèse) hal-01330031v1

A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

Isabelle Lesur Kupin Lesur , Alison Bechade , Céline C. Lalanne , Christophe Klopp , Céline Noirot et al.

Molecular Ecology Resources, 2015, 15 (5), pp.1192-1204. ⟨10.1111/1755-0998.12373⟩

Article dans une revue istex hal-02640346v1
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The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

Isabelle Lesur , Grégoire G. Le Provost , Pascal Bento , Corinne da Silva , Jean-Charles Leplé et al.

BMC Genomics, 2015, 16 (1), pp.112. ⟨10.1186/s12864-015-1331-9⟩

Article dans une revue hal-02285504v1

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Christophe Plomion , Jean-Marc Aury , Joëlle Amselem , Tina Alaeitabar , Valérie Barbe et al.

Molecular Ecology Resources, 2015, 16 (1), pp.254-265. ⟨10.1111/1755-0998.12425⟩

Article dans une revue istex hal-01579667v1

Proteomic analysis during ontogenesis of secondary xylem in maritime pine

Marcelo Arnoldo Garces , Grégoire G. Le Provost , Céline C. Lalanne , Stéphane Claverol , Aurélien Barré et al.

Tree Physiology, 2014, 34 (11), pp.1263-1277. ⟨10.1093/treephys/tpt117⟩

Article dans une revue hal-02632854v1

De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology

Javier Canales , Rocío Bautista , Philippe Label , Josefa Gómez-Maldonado , Isabelle Lesur Kupin Lesur et al.

Plant Biotechnology Journal, 2014, 12 (3), pp.286-299. ⟨10.1111/pbi.12136⟩

Article dans une revue hal-02640932v1
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Soil water stress affects both cuticular wax content and cuticle-related gene expression in young saplings of maritime pine (Pinus pinaster Ait)

Grégoire G. Le Provost , Frederic Domergue , Céline C. Lalanne , Patricio Ramos Campos , Antoine Grosbois et al.

BMC Plant Biology, 2013, 13, ⟨10.1186/1471-2229-13-95⟩

Article dans une revue hal-02648235v1
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High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

Emilie E. Chancerel , Jean-Baptiste J.-B. Lamy , Isabelle Lesur Kupin Lesur , Celine C. Noirot , Christophe Klopp et al.

BMC Biology, 2013, 11, 19 p. ⟨10.1186/1741-7007-11-50⟩

Article dans une revue hal-00964786v1
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Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

Saneyoshi Ueno , Christophe Klopp , Jean-Charles Leplé , Jérémy Derory , Céline Noirot et al.

BMC Genomics, 2013, 14, 15 p. ⟨10.1186/1471-2164-14-236⟩

Article dans une revue hal-02650124v1
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Identification and Expression of Nine Oak Aquaporin Genes in the Primary Root Axis of Two Oak Species, Quercus petraea and Quercus robur

Claire Rasheed-Depardieu , Claire Parent , Michèle Crèvecoeur , Julien Parelle , Fabienne Tatin-Froux et al.

PLoS ONE, 2012, 7 (12), pp.11. ⟨10.1371/journal.pone.0051838⟩

Article dans une revue hal-00794717v1
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Transcriptional analysis of differentially expressed genes in response to stem inclination in young seedlings of pine

P. Ramos , Grégoire G. Le Provost , C. Gantz , Christophe Plomion , R. Herrera

Plant Biology, 2012, 14 (6), pp.923-933. ⟨10.1111/j.1438-8677.2012.00572.x⟩

Article dans une revue istex hal-02653052v1

Role of waterlogging-responsive genes in shaping interspecific differentiation between two sympatric oak species

Grégoire Le Provost , Cécile Sulmon , Jean-Marc Frigerio , Catherine Bodénès , Antoine Kremer et al.

Tree Physiology, 2012, 32 (2), pp.119-134. ⟨10.1093/treephys/tpr123⟩

Article dans une revue hal-00686932v1

ACC oxidase and ACC synthase expression profiles after leaning of young radiata (P. radiata D. Don) and maritime pine (P. pinaster Ait.) seedlings

Patricio Ramos , Claudio Valenzuela , Grégoire G. Le Provost , Christophe Plomion , Carlos Gantz et al.

Journal of Plant Growth Regulation, 2012, 31 (3), pp.382-391. ⟨10.1007/s00344-011-9248-2⟩

Article dans une revue istex hal-02652269v1
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Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Emilie E. Chancerel , Camille Lepoittevin , Grégoire G. Le Provost , Yao-Cheng Lin , Juan Pablo Jaramillo-Correa et al.

BMC Genomics, 2011, 12, 14 p. ⟨10.1186/1471-2164-12-368⟩

Article dans une revue hal-02649406v1
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Deciphering cork formation in Quercus suber

Jorge A.P. Paiva , Pedro Fevereiro , Pedro Marques , José Carlos Rodrigues , Grégoire G. Le Provost et al.

BMC Proceedings, 2011, 5 (Suppl 7), pp.172

Article dans une revue hal-02649545v1
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Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

Patricia P. Faivre-Rampant , Isabelle Lesur , Clément Boussardon , Frederique Bitton , Marie-Laure Martin-Magniette et al.

BMC Genomics, 2011, 12, 13 p. ⟨10.1186/1471-2164-12-292⟩

Article dans une revue hal-02646702v1
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Detection of genes involved in bud phenology in sessile oak (Quercus petraea Matt. Liebl) combining digital expression analysis and Q-PCR

Saneyoshi Ueno , Christophe Klopp , Céline Noirot , Valérie V. Léger , Elodie Prince et al.

BMC Proceedings, 2011, 5 (Suppl. 7), pp.1-2. ⟨10.1186/1753-6561-5-S7-P20⟩

Article dans une revue hal-02641988v1
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Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak.

Saneyoshi Ueno , Grégoire Le Provost , Valérie Léger , Christophe Klopp , Céline Noirot et al.

BMC Genomics, 2010, 11, pp.650. ⟨10.1186/1471-2164-11-650⟩

Article dans une revue hal-00645933v1
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The diversity of 13C isotope discrimination in a Quercus robur full-sib family is associated with differences in intrinsic water use efficiency, transpiration efficiency, and stomatal conductance

Magali M. Roussel , Erwin Dreyer , Pierre Montpied , Grégoire G. Le Provost , Jean-Marc J.-M. Guehl et al.

Journal of Experimental Botany, 2009, 60 (8), pp.2419-2431. ⟨10.1093/jxb/erp100⟩

Article dans une revue hal-02667054v1

Plasticity of maritime pine (Pinus pinaster Ait.) wood forming tissues during a growing season.

Jorge Almiro Paiva , Pauline Garnier‐géré , J. C. Rodrigues , A. Alves , Sara Santos et al.

New Phytologist, 2008, 179 (4), pp.1080-1094. ⟨10.1111/j.1469-8137.2008.02536.x⟩

Article dans une revue hal-02657853v1

Molecular and phenotypic profiling from the base to the crown in maritime pine wood-forming tissue

Jorge Almiro Paiva , Marcelo Arnoldo Garces , A. Alves , Pauline Garnier‐géré , J.C. Rodrigues et al.

New Phytologist, 2008, 178 (2), pp.283-301. ⟨10.1111/j.1469-8137.2008.02379.x⟩

Article dans une revue hal-02655721v1
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A micromethod for high throughput RNA extraction in forest trees

Grégoire G. Le Provost , Raul Herrera , Jorge Almiro Paiva , Philippe Chaumeil , Franck F. Salin et al.

Biological Research, 2007, 40 (3), pp.291-297

Article dans une revue hal-02655724v1

Range-wide phylogeography and gene zones in Pinus pinaster Ait. revealed by chloroplast microsatellite markers

Gabriele Bucci , Santiago C. González-Martínez , Grégoire G. Le Provost , Christophe Plomion , Maria Margarida Ribeiro et al.

Molecular Ecology, 2007, 16 (10), pp.2137-2153. ⟨10.1111/j.1365-294X.2007.03275.x⟩

Article dans une revue hal-02658068v1

Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins

Christophe Plomion , Céline C. Lalanne , Stéphane Claverol , Hakim Meddour , Annegret Kohler et al.

Proteomics, 2006, 6 (24), pp.6509-6527. ⟨10.1002/pmic.200600362⟩

Article dans une revue istex hal-02663888v1
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Improved detection of episomal Banana streak viruses by multiplex immunocapture PCR

Grégoire Le Provost , Marie-Line Iskra-Caruana , Isabelle Acina , Pierre-Yves Teycheney

Journal of Virological Methods, 2006, 137, pp.7 - 13. ⟨10.1016/j.jviromet.2006.05.021⟩

Article dans une revue hal-04200595v1

The proteome of maritime pine wood forming tissue

Jean-Marc Gion , Céline Lalanne , Grégoire Le Provost , Hélène Ferry-Dumazet , Jorge Paiva et al.

Proteomics, 2005, 5, pp.3731-3751

Article dans une revue hal-00306580v1

Nucleotide variation in genes involved in wood formation in two species

David Pot , Lisa Mcmillan , Craig Echt , Grégoire G. Le Provost , Pauline Garnier‐géré et al.

New Phytologist, 2005, 167 (1), pp.101-112. ⟨10.1111/j.1469-8137.2005.01417.x⟩

Article dans une revue hal-02677755v1

The proteome of maritime pine wood forming tissue

Jean-Marc J.-M. Gion , Céline C. Lalanne , Grégoire G. Le Provost , Hélène Ferry-Dumazet , Jorge Almiro Paiva et al.

Proteomics, 2005, 5 (14), pp.3731-3751. ⟨10.1002/pmic.200401197⟩

Article dans une revue istex hal-02678286v1
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Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine (Pinus pinaster) seedlings

Christian Dubos , Grégoire Le Provost , David Pot , Franck Salin , Céline Lalanne et al.

Tree Physiology, 2003, 23 (3), pp.169-179. ⟨10.1093/treephys/23.3.169⟩

Article dans une revue hal-04200586v1
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Seasonal variation in transcript accumulation in wood-forming tissues of maritime pine (Pinus pinaster Ait.) with emphasis on a cell wall glycine-rich protein

Grégoire Le Provost , Jorge Paiva , David Pot , Jean Brach , Christophe Plomion

Planta, 2003, 217, pp.820 - 830. ⟨10.1007/s00425-003-1051-2⟩

Article dans une revue hal-04200603v1

Seasonal variation in transcript accumulation in wood-forming tissues of maritime pine (Pinus pinaster Ait.) with emphasis on a cell wall glycine-rich protein

Grégoire G. Le Provost , Jorge Almiro Paiva , D. Pot , J. Brach , Christophe Plomion

Planta, 2003, 217, pp.820-830

Article dans une revue hal-02678413v1
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Pollen contamination in a maritime pine polycross seed orchard and certification of improved seeds using chloroplast microsatellites

Christophe Plomion , Grégoire Le Provost , David Pot , Giovanni Giuseppe Vendramin , Sophie Gerber et al.

Canadian Journal of Forest Research, 2001, 31, pp.1816-1825. ⟨10.1139/cjfr-31-10-1816⟩

Article dans une revue hal-04200575v1