gregoire Le Provost

Chargé de Recherches
78%
Libre accès
50
Documents
Affiliation actuelle
  • Biodiversité, Gènes & Communautés (BioGeCo)
Identifiants chercheurs

Présentation

Co-leader of the Xylomes team.

My research interest use functional genomics (from transcriptome to epigenome) to dissect complex traits of ecological importance (bud phenology and response to abiotic stress) in European white oaks.

Domaines de recherche

Sciences de l'environnement

Compétences

biologie molèculaire, épigénétique, arbres forestiers.

Publications

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Publications

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A Strategy for Studying Epigenetic Diversity in Natural Populations: Proof of Concept in Poplar and Oak

Isabelle Lesur Kupin , Odile Rogier , Mamadou Dia Sow , Christophe Boury , Alexandre Duplan et al.
Journal of Experimental Botany, 2024, 75 (18), pp.5568-5584. ⟨10.1093/jxb/erae266⟩
Article dans une revue hal-04621404 v1
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Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology

Gregoire Le Provost , Céline Lalanne , Isabelle Lesur , Jean-Marc Louvet , Sylvain Delzon et al.
BMC Plant Biology, 2023, 23 (108), ⟨10.1186/s12870-023-04069-2⟩
Article dans une revue hal-04003618 v1
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Molecular plasticity to soil water deficit differs between sessile oak (Quercus Petraea (Matt.) Liebl.) high- and low-water use efficiency genotypes.

Gregoire Le Provost , Theo Gerardin , Christophe Plomion , Oliver Brendel
Article dans une revue hal-03739690 v1
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Gene expression and genetic divergence in oak species highlight adaptive genes to soil water constraints

Grégoire Le Provost , Benjamin Brachi , Isabelle Lesur , Céline Lalanne , Karine Labadie et al.
Plant Physiology, 2022, 190 (4), pp.2466-2483. ⟨10.1093/plphys/kiac420/6692722⟩
Article dans une revue hal-03771214 v1
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A Chromosome-level genome assembly of the European Beech (Fagus sylvatica) reveals anomalies for organelle DNA integration, repeat Content and distribution of SNPs

Bagdevi Mishra , Bartosz Ulaszewski , Joanna Meger , Jean-Marc Aury , Catherine Bodénès et al.
Frontiers in Genetics, 2022, 12, pp.691058. ⟨10.3389/fgene.2021.691058⟩
Article dans une revue hal-03602006 v1
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Genetic signatures of divergent selection in European beech ( Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range

Dragos Postolache , Sylvie Oddou-Muratorio , Elia Vajana , Francesca Bagnoli , Erwan Guichoux et al.
Molecular Ecology, 2021, 30, pp.5029-5047. ⟨10.1111/mec.16115⟩
Article dans une revue hal-03338410 v1
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High-quality SNPs from genic regions highlight introgression patterns among European white oaks (Quercus petraea and Q. robur)

Tiange Lang , Pierre P. Abadie , Valérie Léger , Thibaut Decourcelle , Jean-Marc Frigerio et al.
Peer Community In Forest & Wood Sciences, 2021, pp.1-33. ⟨10.1101/388447⟩
Article dans une revue hal-01985021 v1
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Expression profiles of 11 candidate genes involved in drought tolerance of pedunculate oak (Quercus robur L.). Possibilities for genetic monitoring of the species.

Branislav Trudić , Gordon Draškić , Grégoire Le Provost , Srđan Stojnić , Andrej Pilipović et al.
Silvae Genetica, 2021, 70 (1), pp.226 - 234. ⟨10.2478/sg-2021-0020⟩
Article dans une revue hal-03552212 v1
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The GenTree Leaf Collection: Inter‐ and intraspecific leaf variation in seven forest tree species in Europe

Raquel Benavides , Bárbara Carvalho , Cristina Bastias , David López‐quiroga , Antonio Mas et al.
Global Ecology and Biogeography, 2021, 30 (3), pp.590-597. ⟨10.1111/geb.13239⟩
Article dans une revue (data paper) hal-03282266 v1

Higher needle anatomic plasticity is related to better water-use efficiency and higher resistance to embolism in fast-growing Pinus pinaster families under water scarcity

Didier Bert , Grégoire Le Provost , Sylvain Delzon , Christophe Plomion , Jean-Marc Gion
Trees - Structure and Function, 2021, 35, pp.287-306. ⟨10.1007/s00468-020-02034-2⟩
Article dans une revue hal-02964038 v1
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The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species

Lars Opgenoorth , Benjamin Dauphin , Raquel Benavides , Katrin Heer , Paraskevi Alizoti et al.
GigaScience, 2021, 10 (3), pp.giab010. ⟨10.1093/gigascience/giab010⟩
Article dans une revue (data paper) hal-03282821 v1
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Adaptive introgression as a driver of local adaptation to climate in European white oaks

Thibault Leroy , Jean-Marc Louvet , Céline Lalanne , Grégoire Le Provost , Karine Labadie et al.
New Phytologist, 2020, 226 (4), pp.1171-1182. ⟨10.1111/nph.16095⟩
Article dans une revue hal-02627923 v1
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Author Correction: The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe

Elisabet Martínez-Sancho , Lenka Slámová , Sandro Morganti , Claudio Grefen , Barbara Carvalho et al.
Scientific Data , 2020, 7 (1), ⟨10.1038/s41597-020-0447-1⟩
Article dans une revue hal-03282224 v1
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Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers

Thibault Leroy , Quentin Rougemont , Jean-Luc Dupouey , Catherine Bodenes , Céline Lalanne et al.
New Phytologist, 2019, online fisrt, pp.1-15. ⟨10.1111/nph.16039⟩
Article dans une revue hal-02622295 v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat et al.
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Article dans une revue hal-01820559 v1
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Hardwood tree genomics: unlocking woody plant biology

Gerald A. Tuskan , Andrew T. Groover , Jeremy Schmutz , Stephen Paul Difazio , Alexander Myburg et al.
Frontiers in Plant Science, 2018, 9, pp.1-9. ⟨10.3389/fpls.2018.01799⟩
Article dans une revue hal-02622509 v1

Genomic resources notes accepted 1 August 2015 - 31 September 2015

. Genomic Resources Development Consortium , Annegret Kohler , Antoine Kremer , Grégoire G. Le Provost , Isabelle Lesur Kupin Lesur et al.
Molecular Ecology Resources, 2016, 16 (1), pp.377-377. ⟨10.1111/1755-0998.12482⟩
Article dans une revue istex hal-02630738 v1
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Forest tree genomics: 10 achievements from the past 10 years and future prospects

Christophe Plomion , Catherine Bastien , Marie-Béatrice Bogeat-Triboulot , Laurent Bouffier , Annabelle Déjardin et al.
Annals of Forest Science, 2016, 73 (1), pp.77-103. ⟨10.1007/s13595-015-0488-3⟩
Article dans une revue (article de synthèse) hal-01330031 v1

Implication of the suberin pathway in adaptation to waterlogging and hypertrophied lenticels formation in pedunculate oak (Quercus robur L.)

Grégoire Le Provost , Isabelle Lesur Kupin , Céline Lalanne , Corinne da Silva , Karine Labadie et al.
Tree Physiology, 2016, 36 (11), pp.1330-1342. ⟨10.1093/treephys/tpw056⟩
Article dans une revue hal-01602423 v1

A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

Isabelle Lesur Kupin Lesur , Alison Bechade , Céline C. Lalanne , Christophe Klopp , Céline Noirot et al.
Molecular Ecology Resources, 2015, 15 (5), pp.1192-1204. ⟨10.1111/1755-0998.12373⟩
Article dans une revue istex hal-02640346 v1
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The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

Isabelle Lesur , Grégoire G. Le Provost , Pascal Bento , Corinne da Silva , Jean-Charles Leplé et al.
BMC Genomics, 2015, 16 (1), pp.112. ⟨10.1186/s12864-015-1331-9⟩
Article dans une revue hal-02285504 v1

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Christophe Plomion , Jean-Marc Aury , Joëlle Amselem , Tina Alaeitabar , Valérie Barbe et al.
Molecular Ecology Resources, 2015, 16 (1), pp.254-265. ⟨10.1111/1755-0998.12425⟩
Article dans une revue istex hal-01579667 v1

Proteomic analysis during ontogenesis of secondary xylem in maritime pine

Marcelo Arnoldo Garces , Grégoire G. Le Provost , Céline C. Lalanne , Stéphane Claverol , Aurélien Barré et al.
Tree Physiology, 2014, 34 (11), pp.1263-1277. ⟨10.1093/treephys/tpt117⟩
Article dans une revue hal-02632854 v1

De novo assembly of maritime pine transcriptome: implications for forest breeding and biotechnology

Javier Canales , Rocío Bautista , Philippe Label , Josefa Gómez-Maldonado , Isabelle Lesur Kupin Lesur et al.
Plant Biotechnology Journal, 2014, 12 (3), pp.286-299. ⟨10.1111/pbi.12136⟩
Article dans une revue hal-02640932 v1
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Soil water stress affects both cuticular wax content and cuticle-related gene expression in young saplings of maritime pine (Pinus pinaster Ait)

Grégoire G. Le Provost , Frederic Domergue , Céline C. Lalanne , Patricio Ramos Campos , Antoine Grosbois et al.
BMC Plant Biology, 2013, 13, ⟨10.1186/1471-2229-13-95⟩
Article dans une revue hal-02648235 v1
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High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

Emilie E. Chancerel , Jean-Baptiste J.-B. Lamy , Isabelle Lesur Kupin Lesur , Celine C. Noirot , Christophe Klopp et al.
BMC Biology, 2013, 11, 19 p. ⟨10.1186/1741-7007-11-50⟩
Article dans une revue hal-00964786 v1
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Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

Saneyoshi Ueno , Christophe Klopp , Jean-Charles Leplé , Jérémy Derory , Céline Noirot et al.
BMC Genomics, 2013, 14, 15 p. ⟨10.1186/1471-2164-14-236⟩
Article dans une revue hal-02650124 v1
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Transcriptional analysis of differentially expressed genes in response to stem inclination in young seedlings of pine

P. Ramos , Grégoire G. Le Provost , C. Gantz , Christophe Plomion , R. Herrera
Plant Biology, 2012, 14 (6), pp.923-933. ⟨10.1111/j.1438-8677.2012.00572.x⟩
Article dans une revue istex hal-02653052 v1
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Identification and Expression of Nine Oak Aquaporin Genes in the Primary Root Axis of Two Oak Species, Quercus petraea and Quercus robur

Claire Rasheed-Depardieu , Claire Parent , Michèle Crèvecoeur , Julien Parelle , Fabienne Tatin-Froux et al.
PLoS ONE, 2012, 7 (12), pp.11. ⟨10.1371/journal.pone.0051838⟩
Article dans une revue hal-00794717 v1

Role of waterlogging-responsive genes in shaping interspecific differentiation between two sympatric oak species

Grégoire Le Provost , Cécile Sulmon , Jean-Marc Frigerio , Catherine Bodénès , Antoine Kremer et al.
Tree Physiology, 2012, 32 (2), pp.119-134. ⟨10.1093/treephys/tpr123⟩
Article dans une revue hal-00686932 v1

ACC oxidase and ACC synthase expression profiles after leaning of young radiata (P. radiata D. Don) and maritime pine (P. pinaster Ait.) seedlings

Patricio Ramos , Claudio Valenzuela , Grégoire G. Le Provost , Christophe Plomion , Carlos Gantz et al.
Journal of Plant Growth Regulation, 2012, 31 (3), pp.382-391. ⟨10.1007/s00344-011-9248-2⟩
Article dans une revue istex hal-02652269 v1
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Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Emilie E. Chancerel , Camille Lepoittevin , Grégoire G. Le Provost , Yao-Cheng Lin , Juan Pablo Jaramillo-Correa et al.
BMC Genomics, 2011, 12, 14 p. ⟨10.1186/1471-2164-12-368⟩
Article dans une revue hal-02649406 v1
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Deciphering cork formation in Quercus suber

Jorge A.P. Paiva , Pedro Fevereiro , Pedro Marques , José Carlos Rodrigues , Grégoire G. Le Provost et al.
BMC Proceedings, 2011, 5 (Suppl 7), pp.172
Article dans une revue hal-02649545 v1
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Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

Patricia P. Faivre-Rampant , Isabelle Lesur , Clément Boussardon , Frederique Bitton , Marie-Laure Martin-Magniette et al.
BMC Genomics, 2011, 12, 13 p. ⟨10.1186/1471-2164-12-292⟩
Article dans une revue hal-02646702 v1
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Detection of genes involved in bud phenology in sessile oak (Quercus petraea Matt. Liebl) combining digital expression analysis and Q-PCR

Saneyoshi Ueno , Christophe Klopp , Céline Noirot , Valérie V. Léger , Elodie Prince et al.
BMC Proceedings, 2011, 5 (Suppl. 7), pp.1-2. ⟨10.1186/1753-6561-5-S7-P20⟩
Article dans une revue hal-02641988 v1
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Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak.

Saneyoshi Ueno , Grégoire Le Provost , Valérie Léger , Christophe Klopp , Céline Noirot et al.
BMC Genomics, 2010, 11, pp.650. ⟨10.1186/1471-2164-11-650⟩
Article dans une revue hal-00645933 v1
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The diversity of 13C isotope discrimination in a Quercus robur full-sib family is associated with differences in intrinsic water use efficiency, transpiration efficiency, and stomatal conductance

Magali M. Roussel , Erwin Dreyer , Pierre Montpied , Grégoire G. Le Provost , Jean-Marc J.-M. Guehl et al.
Journal of Experimental Botany, 2009, 60 (8), pp.2419-2431. ⟨10.1093/jxb/erp100⟩
Article dans une revue hal-02667054 v1

Molecular and phenotypic profiling from the base to the crown in maritime pine wood-forming tissue

Jorge Almiro Paiva , Marcelo Arnoldo Garces , A. Alves , Pauline Garnier‐géré , J.C. Rodrigues et al.
New Phytologist, 2008, 178 (2), pp.283-301. ⟨10.1111/j.1469-8137.2008.02379.x⟩
Article dans une revue hal-02655721 v1

Plasticity of maritime pine (Pinus pinaster Ait.) wood forming tissues during a growing season.

Jorge Almiro Paiva , Pauline Garnier‐géré , J. C. Rodrigues , A. Alves , Sara Santos et al.
New Phytologist, 2008, 179 (4), pp.1080-1094. ⟨10.1111/j.1469-8137.2008.02536.x⟩
Article dans une revue hal-02657853 v1
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A micromethod for high throughput RNA extraction in forest trees

Grégoire G. Le Provost , Raul Herrera , Jorge Almiro Paiva , Philippe Chaumeil , Franck F. Salin et al.
Biological Research, 2007, 40 (3), pp.291-297
Article dans une revue hal-02655724 v1

Range-wide phylogeography and gene zones in Pinus pinaster Ait. revealed by chloroplast microsatellite markers

Gabriele Bucci , Santiago C. González-Martínez , Grégoire G. Le Provost , Christophe Plomion , Maria Margarida Ribeiro et al.
Molecular Ecology, 2007, 16 (10), pp.2137-2153. ⟨10.1111/j.1365-294X.2007.03275.x⟩
Article dans une revue hal-02658068 v1

Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins

Christophe Plomion , Céline C. Lalanne , Stéphane Claverol , Hakim Meddour , Annegret Kohler et al.
Proteomics, 2006, 6 (24), pp.6509-6527. ⟨10.1002/pmic.200600362⟩
Article dans une revue istex hal-02663888 v1

The proteome of maritime pine wood forming tissue

Jean-Marc Gion , Céline Lalanne , Grégoire Le Provost , Hélène Ferry-Dumazet , Jorge Paiva et al.
Proteomics, 2005, 5, pp.3731-3751
Article dans une revue hal-00306580 v1

Nucleotide variation in genes involved in wood formation in two species

David Pot , Lisa Mcmillan , Craig Echt , Grégoire G. Le Provost , Pauline Garnier‐géré et al.
New Phytologist, 2005, 167 (1), pp.101-112. ⟨10.1111/j.1469-8137.2005.01417.x⟩
Article dans une revue hal-02677755 v1

The proteome of maritime pine wood forming tissue

Jean-Marc J.-M. Gion , Céline C. Lalanne , Grégoire G. Le Provost , Hélène Ferry-Dumazet , Jorge Almiro Paiva et al.
Proteomics, 2005, 5 (14), pp.3731-3751. ⟨10.1002/pmic.200401197⟩
Article dans une revue istex hal-02678286 v1
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Identification and characterization of water-stress-responsive genes in hydroponically grown maritime pine (Pinus pinaster) seedlings

Christian Dubos , Grégoire Le Provost , David Pot , Franck Salin , Céline Lalanne et al.
Tree Physiology, 2003, 23 (3), pp.169-179. ⟨10.1093/treephys/23.3.169⟩
Article dans une revue hal-04200586 v1

Seasonal variation in transcript accumulation in wood-forming tissues of maritime pine (Pinus pinaster Ait.) with emphasis on a cell wall glycine-rich protein

Grégoire G. Le Provost , Jorge Almiro Paiva , D. Pot , J. Brach , Christophe Plomion
Planta, 2003, 217, pp.820-830
Article dans une revue hal-02678413 v1
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Pollen contamination in a maritime pine polycross seed orchard and certification of improved seeds using chloroplast microsatellites

Christophe Plomion , Grégoire Le Provost , David Pot , Giovanni Giuseppe Vendramin , Sophie Gerber et al.
Canadian Journal of Forest Research, 2001, 31, pp.1816-1825. ⟨10.1139/cjfr-31-10-1816⟩
Article dans une revue hal-04200575 v1