Harold Duruflé
- Biologie intégrée pour la valorisation de la diversité des Arbres et de la Forêt (BioForA)
Présentation
PROJECTS
On Going: 2026-2030 CARBOOST (PEPR SVA AAP2025, €500k) Carbon Boost in Woody Perennials under Stress. Project Coordinator.
2025-2027 TIMe-ID Consortium (INRAE DIGIT-BIO Metaprogram, €20k) Interdisciplinary Work on Methodologies for Integrating Temporal Data in Biology. Co-coordinator of the project.
2025-2028 EpiMyc (ANR-24-CE20-5751) The Epigenetics of Mycorrhizae. Co-coordinator of WP2.
Past: 2024 INRAE CSR Incubator Project (€8k) MicroGroves: Creating, maintaining, and evaluating micro-groves. Project Coordinator.
2017-2020 SUNRISE (Project IA-11-BTBR-0005) Sunflower genetic resources for improving oil production stability under water stress. Task leader 4.2 & 6.2 (systems biology approach).
RESEARCH EXPERIENCE
2021 Research Scientist: Integrative genomic prediction of complex phenotypes using system biology approach - Integrated Biology for the Development of Tree and Forest Diversity Laboratory, UMR INRAE/ONF 0588
2017 PostDoc position: Develop the systems biology approach within the SUNRISE project ; 3 years - Laboratory of Plant-Microbe Interactions, UMR 2594/441 CNRS/INRA, Toulouse, France - Team: Sunflower Genetics and Genomics (N. Langlade)
2014 Doctorate: “Production and treatment of heterogeneous Omics data in order to study the cell wall plasticity in A. thaliana ecotypes living at contrasted altitudinal level”; 3 years - Plant Science Research Laboratory, UMR 5546 UPS/CNRS, Toulouse, France (Pr C. Dunand) - Toulouse Mathematics Institute, France (Pr P. Besse)
2014 Crop ontology curator. Bioversity International, Montpellier Office (France); 10 months Team: Crop Ontology project of the Generation Challenge Programme (E. Arnaud)
Internship: 2013 Station Biologique de Roscoff, Marine Plants and Biomolecules, UMR 7139 UPMC/CNRS; 6 months
2012 Laboratory “Ecosystems, Biodiversity, Evolution”, UMR 6553 Rennes 1 University/CNRS; 3 months
2011 Laboratory of Plants Ecophysiological Responses to Environmental Stress, INRA Montpellier; 6 months
2010 Laboratory “Ecology Systematic Evolution”, Paris-Sud 11 University; 4 months Team: Photosynthesis, environment and adaptation (P. Streb & G. Cornic)
2004-2011 Joseph Fourier Alpine Station, Alpine Botanical garden of Lautaret; Internship 2 months / year
EDUCATION
2017 PhD of Agronomic and Ecological Sciences, specializing in plant development University of Toulouse
2013 M.Sc. Degree: Integrative plant biology: Gene, Plant, Agro-system 6 collaborating universities & Agrocampus Ouest (France) Major: Physiology/Metabolism and Eco-Physiology.
2011 BSc Degree: Functional Plant Biology Montpellier 2 University (France)
TEACHING and MENTORING
Supervision:
PhD:
2021-2022 - Abdou Rahmane Wade. Improved genome-based phenotypic predictions with a systems biology approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Vincent Segura) 2022-2025 - Alexandre Duplan. Improvement of pan-genomic knowledge and prediction of complex phenotypes by an integrative multi-omics approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Stephane Maury) 2025-on going - Thomas Wacquet. Machine learning and epigenotyping: a new lever for improving phenotype prediction in plants in an agroecological context. (Co-doctoral advisor: Mathieu Emily & Stephane Maury)
PostDoc: 2022 - Xabi Cazenave
Teaching:
Since 2025: Saclay University: Integrative study of omics data. Master 2 Since 2024: Orléans University: Integrative biology within the framework of plant biology. Master 2 2015 - 2017: Toulouse University, biostatistics and biophysics at BSc. Degree,
Publications
Publications
Multi-omics Data Integration in the Context of Plant Abiotic Stress SignalingPlant Abiotic Stress Signaling, 2642, Springer US, pp.295-318, 2023, Methods in Molecular Biology, ⟨10.1007/978-1-0716-3044-0_16⟩
Chapitre d'ouvrage
hal-04040408
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Plantation participative de micro-bosquets2025
Autre publication scientifique
hal-05314922
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Natural variation in chalcone isomerase defines a major locus controlling growth variation between Populus nigra populations2025
Pré-publication, Document de travail
hal-04919866
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Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra)2023
Pré-publication, Document de travail
hal-04170410
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eQTLs are key players in the integration of genomic and transcriptomic data for phenotype prediction2022
Pré-publication, Document de travail
hal-03509327
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Proteomic data from leaves of twenty-four sunflower genotypes under water deficit2020
Pré-publication, Document de travail
(preprint/prepublication)
hal-02544815
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Production et traitement de données omiques hétérogènes en vue de l'étude de la plasticité de la paroi chez des écotypes de la plante modèle Arabidopsis thaliana provenant d'altitudes contrastéesBiologie végétale. Université Paul Sabatier - Toulouse III, 2017. Français. ⟨NNT : 2017TOU30219⟩
Thèse
tel-02004363
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