
Harold Duruflé
- Biologie intégrée pour la valorisation de la diversité des Arbres et de la Forêt (BioForA)
Présentation
RESEARCH EXPERIENCE
2021 Research Scientist: Integrative genomic prediction of complex phenotypes using system biology approach - Integrated Biology for the Development of Tree and Forest Diversity Laboratory, UMR INRAE/ONF 0588
2017 PostDoc position: Develop the systems biology approach within the SUNRISE project ; 3 years - Laboratory of Plant-Microbe Interactions, UMR 2594/441 CNRS/INRA, Toulouse, France - Team: Sunflower Genetics and Genomics (N. Langlade)
2014 PhD: “Production and treatment of heterogeneous Omics data in order to study the cell wall plasticity in A. thaliana ecotypes living at contrasted altitudinal level”; 3 years - Plant Science Research Laboratory, UMR 5546 UPS/CNRS, Toulouse, France (Pr C. Dunand) - Toulouse Mathematics Institute, France (Pr P. Besse)
2014 Crop ontology curator. Bioversity International, Montpellier Office (France); 10 months Team: Crop Ontology project of the Generation Challenge Programme (E. Arnaud)
Internship: 2013 Station Biologique de Roscoff, Marine Plants and Biomolecules, UMR 7139 UPMC/CNRS; 6 months
2012 Laboratory “Ecosystems, Biodiversity, Evolution”, UMR 6553 Rennes 1 University/CNRS; 3 months
2011 Laboratory of Plants Ecophysiological Responses to Environmental Stress, INRA Montpellier; 6 months
2010 Laboratory “Ecology Systematic Evolution”, Paris-Sud 11 University; 4 months Team: Photosynthesis, environment and adaptation (P. Streb & G. Cornic)
2004-2011 Joseph Fourier Alpine Station, Alpine Botanical garden of Lautaret; Internship 2 months / year
EDUCATION
2013 M.Sc. Degree: Integrative plant biology: Gene, Plant, Agro-system 6 collaborating universities & Agrocampus Ouest (France) Major: Physiology/Metabolism and Eco-Physiology.
2011 BSc Degree: Functional Plant Biology Montpellier 2 University (France)
TEACHING and MENTORING
Supervision:
PhD: 2021-2022 - Abdou Rahmane Wade. Improved genome-based phenotypic predictions with a systems biology approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Vincent Segura) 2022-on going - Alexandre Duplan. Improvement of pan-genomic knowledge and prediction of complex phenotypes by an integrative multi-omics approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Stephane Maury)
PostDoc: 2022 - Xabi Cazenave : Postdoc: 11 months
Internship: 2023 - Alae-Eddine LEKCHIRI, Master degree, Rennes University 2023 - Maya Doureradjam. Master degree, Montpellier University (France): 6 months 2022 - Julien Desforges. Master degree, Orleans University (France): 4 months 2018 - Claire Espérou. 4th year in mathematics and modelling engineering school of INSA, Toulouse (France): 3 months 2017 - Sébastien Viudes. Master degree, Toulouse University (France): 2 months 2016 - Merwann Selmani. 4th year in mathematics and modelling engineering school of INSA, Toulouse (France): 3 months 2015 - Duchesse Lacour Mbadinga Mbadinga. BSc. Degree, Toulouse University (France): 6 months
Others: 2019 - Caroline Laffray. Engineer: 1 year 2018 - Charlotte Penouilh-Suzette. Engineer: 6 months
Teaching: Since 2024: University of Orléans, Integrative biology in the context of plant biology, 4 h per years. 2015 - 2017: Toulouse University, biostatistics and biophysics at BSc. Degree, 70 h per years.
PROFESSIONAL SERVICES
International meeting organization committees of: - The School on multivariate data analysis methods for biological data using the R package mixOmics, 2 - 4 July 2024, Orléans (France) - The IX European Plant Science Retreat, 20 - 23 June 2017, Toulouse (France) - The Workshop on Multivariate data integration using the R package mixOmics, 12 - 14 September 2016, Toulouse (France) - The Workshop on Crop Ontology and Phenotyping Data Interoperability, 31 March - 4 April 2014, Montpellier (France)
Publications
Publications
Multi-omics Data Integration in the Context of Plant Abiotic Stress SignalingPlant Abiotic Stress Signaling, 2642, Springer US, pp.295-318, 2023, Methods in Molecular Biology, ⟨10.1007/978-1-0716-3044-0_16⟩
Chapitre d'ouvrage
hal-04040408
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Natural variation in chalcone isomerase defines a major locus controlling growth variation between Populus nigra populations2025
Pré-publication, Document de travail
hal-04919866
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Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra)2023
Pré-publication, Document de travail
hal-04170410
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eQTLs are key players in the integration of genomic and transcriptomic data for phenotype prediction2022
Pré-publication, Document de travail
hal-03509327
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Proteomic data from leaves of twenty-four sunflower genotypes under water deficit2020
Pré-publication, Document de travail
(preprint/prepublication)
hal-02544815
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Production et traitement de données omiques hétérogènes en vue de l'étude de la plasticité de la paroi chez des écotypes de la plante modèle Arabidopsis thaliana provenant d'altitudes contrastéesBiologie végétale. Université Paul Sabatier - Toulouse III, 2017. Français. ⟨NNT : 2017TOU30219⟩
Thèse
tel-02004363
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