Harry Sokol

307
Documents

Publications

Publications

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Alterations in mucosa branched N -glycans lead to dysbiosis and downregulation of ILC3: a key driver of intestinal inflammation

Cláudia S Rodrigues , Joana Gaifem , Márcia S Pereira , Maria Francisca Alves , Mariana Silva et al.
Gut microbes, 2025, 17 (1), ⟨10.1080/19490976.2025.2461210⟩
Article dans une revue hal-05166804 v1

Diet and Microbiome-Directed Therapy 2.0 for IBD

Ashwin Ananthakrishnan , Kevin Whelan , Jessica Allegretti , Harry Sokol
Clinical Gastroenterology and Hepatology, 2025, 23 (3), pp.406-418. ⟨10.1016/j.cgh.2024.05.049⟩
Article dans une revue (article de synthèse) hal-05157422 v1

Regorafenib plus avelumab in advanced gastroenteropancreatic neuroendocrine neoplasms: a phase 2 trial and correlative analysis

Sophie Cousin , Jean-Philippe Guegan , Lola Jade Palmieri , Jean Philippe Metges , Simon Pernot et al.
Nature Cancer, 2025, 6 (4), pp.584-594. ⟨10.1038/s43018-025-00916-3⟩
Article dans une revue hal-05086448 v1
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sMAdCAM‐1 is decreased after allo‐HCT, along with gut microbiota dysbiosis, and is associated with hematopoietic recovery

Karen Fadel , Lama Siblany , Razan Mohty , Nicolas Stocker , Ludovic Suner et al.
HemaSphere, 2025, 9 (1), ⟨10.1002/hem3.70074⟩
Article dans une revue hal-05165943 v1
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Faecalibacterium prausnitzii Is Associated With Clinical Response to Immune Checkpoint Inhibitors in Patients With Advanced Gastric Adenocarcinoma: Results of Microbiota Analysis of PRODIGE 59-FFCD 1707-DURIGAST Trial

Marius Bredon , Karine Le Malicot , Christophe Louvet , Ludovic Evesque , Daniel Gonzalez et al.
Gastroenterology, 2025, 168 (3), pp.601-603.e2. ⟨10.1053/j.gastro.2024.10.020⟩
Article dans une revue (article de synthèse) hal-05157519 v1
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Immunometabolic reprogramming of macrophages by gut microbiota-derived cadaverine controls colon inflammation

Rodrigo de Oliveira Formiga , Qing Li , Yining Zhao , Márcio Augusto Campos Ribeiro , Perle Guarino-Vignon et al.
Cell Host & Microbe, 2025, 33 (11), pp.1855-1872.e10. ⟨10.1016/j.chom.2025.09.009⟩
Article dans une revue hal-05311416 v1
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International consensus statement on microbiome testing in clinical practice

Serena Porcari , Benjamin H Mullish , Francesco Asnicar , Siew C Ng , Liping Zhao et al.
The Lancet Gastroenterology & Hepatology, 2025, 10 (2), pp.154 - 167. ⟨10.1016/s2468-1253(24)00311-x⟩
Article dans une revue pasteur-05265380 v1
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Integrative metagenomics and metabolomics reveal age-associated gut microbiota and metabolite alterations in a hamster model of COVID-19

Patrícia Brito Rodrigues , Vinícius de Rezende Rodovalho , Valentin Sencio , Nicolas Benech , Marybeth Creskey et al.
Gut microbes, 2025, 17 (1), pp.2486511. ⟨10.1080/19490976.2025.2486511⟩
Article dans une revue inserm-05026556 v1
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Gut microbiota modulation through Akkermansia spp. supplementation increases CAR-T cell potency

Laura Marcos-Kovandzic , Michele Avagliano , Myriam Ben Khelil , Janesa Srikanthan , Rim Abdallah et al.
Cancer Discovery, 2025, ⟨10.1158/2159-8290.CD-24-1230⟩
Article dans une revue inserm-05147917 v1
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Faecalibacterium Diversity in the Gut Microbiome of Crohn's Disease Patients

Paul Mclellan , Sandrine Auger , Marie Therese Goudiaby , Loic Brot , Nicolas Benech et al.
United European Gastroenterology Journal, 2025, ⟨10.1002/ueg2.70023⟩
Article dans une revue hal-05106089 v1
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Microbial metabolite indole-3-propionic acid drives mitochondrial respiration in CD4+ T cells to confer protection against intestinal inflammation

Qing Li , Rodrigo de Oliveira Formiga , Virginie Puchois , Laura Creusot , Ahmad Haidar Ahmad et al.
Nature Metabolism, In press, Online ahead of print. ⟨10.1038/s42255-025-01396-6⟩
Article dans une revue pasteur-05390470 v1
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Gut microbiota alterations are linked to COVID-19 severity in North African and European populations

Marius Bredon , Pierre Hausfater , Loubna Khalki , Youssef Tijani , Amine Cheikh et al.
npj Biofilms and Microbiomes, 2025, 11 (1), pp.106. ⟨10.1038/s41522-025-00733-7⟩
Article dans une revue inserm-05376814 v1
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Faecalibacterium duncaniae as a novel next generation probiotic against influenza

Loïc Chollet , Séverine Heumel , Lucie Deruyter , Fabrice Bouilloux , Lou Delval et al.
Frontiers in Immunology, 2024, 15, pp.1347676. ⟨10.3389/fimmu.2024.1347676⟩
Article dans une revue hal-04786870 v1

The gut microbiota posttranslationally modifies IgA1 in autoimmune glomerulonephritis

Patrick Gleeson , Nicolas Benech , Jonathan Chemouny , Eleftheria Metallinou , Laureline Berthelot et al.
Science Translational Medicine, 2024, 16 (740), pp.eadl6149. ⟨10.1126/scitranslmed.adl6149⟩
Article dans une revue hal-04942137 v1
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Dual molecule targeting HDAC6 leads to intratumoral CD4+ cytotoxic lymphocytes recruitment through MHC-II upregulation on lung cancer cells

Sarah Ducellier , Mélanie Demeules , Boris Letribot , Massimiliano Gaetani , Chloé Michaudel et al.
Journal for Immunotherapy of Cancer, 2024, 12 (4), pp.e007588. ⟨10.1136/jitc-2023-007588⟩
Article dans une revue hal-05154786 v1
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Dissecting the respective roles of microbiota and host genetics in the susceptibility of Card9−/− mice to colitis

Camille Danne , Bruno Lamas , Aonghus Lavelle , Marie-Laure Michel , Gregory da Costa et al.
Article dans une revue hal-04678119 v1

Use of frozen native feces for fecal microbiota transplantation in recurrent Clostridioides difficile infection: a simple way to improve the efficiency of donor feces preparation

Rachel Sintes , Paul Mclellan , Gabriele Navelli , Cécilia Landman , Sandrine Delage et al.
Antimicrobial Agents and Chemotherapy, 2024, 68 (10), ⟨10.1128/aac.00734-24⟩
Article dans une revue hal-05154059 v1

Systemic inflammatory response to daily exposure to microcystin-LR and the underlying gut microbial mechanisms

Yanyan Zhao , Harry Sokol , Qing Cao , Hui Zhang , Yunjun Yan et al.
Journal of Hazardous Materials, 2024, 480, pp.135855. ⟨10.1016/j.jhazmat.2024.135855⟩
Article dans une revue hal-05157608 v1
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Counteracting tryptophan metabolism alterations as a new therapeutic strategy for rheumatoid arthritis

David Moulin , Marie Millard , Mahdia Taïeb , Chloé Michaudel , Anne Aucouturier et al.
Annals of the Rheumatic Diseases, 2024, 83 (3), pp.312-323. ⟨10.1136/ard-2023-224014⟩
Article dans une revue hal-04307521 v1

Gut microbiota alterations are associated with phenotype and genotype in familial Mediterranean fever

Marion Delplanque , Nicolas Benech , Nathalie Rolhion , Cyriane Oeuvray , Marjolène Straube et al.
Rheumatology, 2024, 63 (4), pp.1039-1048. ⟨10.1093/rheumatology/kead322⟩
Article dans une revue hal-04565247 v1
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Can the Evidence-Based Use of Probiotics (Notably Saccharomyces boulardii CNCM I-745 and Lactobacillus rhamnosus GG) Mitigate the Clinical Effects of Antibiotic-Associated Dysbiosis?

Dan Waitzberg , Francisco Guarner , Iva Hojsak , Gianluca Ianiro , D. Brent Polk et al.
Advances in Therapy, 2024, 41 (3), pp.901-914. ⟨10.1007/s12325-024-02783-3⟩
Article dans une revue hal-05156320 v1
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Faecalibacterium prausnitzii strain EXL01 boosts efficacy of immune checkpoint inhibitors

Marius Bredon , Camille Danne , Hang Phuong Pham , Pauline Ruffié , Alban Bessede et al.
OncoImmunology, 2024, 13 (1), ⟨10.1080/2162402X.2024.2374954⟩
Article dans une revue hal-05158082 v1
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Comparative analysis of the duodenojejunal microbiome with the oral and fecal microbiomes reveals its stronger association with obesity and nutrition

Emilie Steinbach , Eugeni Belda , Rohia Alili , Solia Adriouch , Charlène J G Dauriat et al.
Gut microbes, 2024, 16 (1), 2405547 [19 p.]. ⟨10.1080/19490976.2024.2405547⟩
Article dans une revue hal-05168100 v1
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Therapeutic perspectives of pre-, pro-, post-biotics in the treatment of sarcopenia

Yves Rolland , Andrea Ticinesi , Harry Sokol , Philipe de Souto Barreto
Journal of Nutrition, Health & Aging, 2024, 28 (7), pp.100298. ⟨10.1016/j.jnha.2024.100298⟩
Article dans une revue (article de synthèse) hal-05165805 v1
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Harnessing intestinal tryptophan catabolism to relieve atherosclerosis in mice

Mouna Chajadine , Ludivine Laurans , Tobias Radecke , Nirmala Mouttoulingam , Rida Al-Rifai et al.
Nature Communications, 2024, 15 (1), pp.6390. ⟨10.1038/s41467-024-50807-x⟩
Article dans une revue hal-04670622 v2
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From animal models to gut-on-chip: the challenging journey to capture inter-individual variability in chronic digestive disorders

Aicha Kriaa , Vincent Mariaule , Charlotte de Rudder , Amin Jablaoui , Harry Sokol et al.
Gut microbes, 2024, 16 (1), pp. 2333434. ⟨10.1080/19490976.2024.2333434⟩
Article dans une revue hal-04603826 v1

Alternating high-fat diet enhances atherosclerosis by neutrophil reprogramming

Jean-Rémi Lavillegrand , Rida Al-Rifai , Sara Thietart , Théo Guyon , Marie Vandestienne et al.
Nature, 2024, 634 (8033), pp.447-456. ⟨10.1038/s41586-024-07693-6⟩
Article dans une revue hal-05168660 v1
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Melatonin alleviates heat stress-induced spermatogenesis dysfunction in male dairy goats by regulating arachidonic acid metabolism mediated by remodeling the gut microbiota

Xinrui Guo , Jing Xu , Yongkang Zhao , Jie Wang , Tingshu Fu et al.
Microbiome, 2024, 12 (1), pp.233. ⟨10.1186/s40168-024-01942-6⟩
Article dans une revue hal-05151370 v1

Clostridioides difficile infection as a potential trigger for Familial Mediterranean Fever attacks and fecal transplantation as a rescue

Sophie Georgin-Lavialle , Marion Delplanque , Claude Bachmeyer , Léa Savey , Harry Sokol
European Journal of Internal Medicine, 2024, 128, pp.148-149. ⟨10.1016/j.ejim.2024.05.023⟩
Article dans une revue hal-05165450 v1

Oral tryptophan activates duodenal aryl hydrocarbon receptor in healthy subjects: a crossover randomized controlled trial

Gaston Rueda , Natalia Causada-Calo , Rajka Borojevic , Andrea Nardelli , Maria Ines Pinto-Sanchez et al.
AJP - Gastrointestinal and Liver Physiology, 2024, 326 (6), pp.G687-G696. ⟨10.1152/ajpgi.00306.2023⟩
Article dans une revue hal-05165916 v1
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Early ileal resection in Crohn's disease is not associated with severe long-term outcomes: The ERIC study

N Grellier , J Kirchgesner , M Uzzan , P Mclellan , C Stefanescu et al.
Alimentary Pharmacology and Therapeutics, 2024, ⟨10.1111/apt.18247⟩
Article dans une revue hal-04691632 v1
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Impact of Clinical and Pharmacological Parameters on Faecal Microbiota Transplantation Outcome in Clostridioides difficile Infections: Results of a 5‐Year French National Survey

Nicolas Benech , Nadim Cassir , Laurent Alric , Frédéric Barbut , Rui Batista et al.
Alimentary Pharmacology & Therapeutics (Suppl), 2024, Online ahead of print. ⟨10.1111/apt.18330⟩
Article dans une revue hal-04735925 v1
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Ipilimumab with atezolizumab-bevacizumab in patients with advanced hepatocellular carcinoma: The PRODIGE 81-FFCD 2101-TRIPLET-HCC trial

Philippe Merle , Jean-Frédéric Blanc , Julien Edeline , Karine Le Malicot , Manon Allaire et al.
Digestive and Liver Disease, 2023, 55 (4), pp 464-470. ⟨10.1016/j.dld.2023.01.161⟩
Article dans une revue hal-04016442 v1
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Impairment of aryl hydrocarbon receptor signalling promotes hepatic disorders in cancer cachexia

Adeline Dolly , Sarah Pötgens , Morgane Thibaut , Audrey Neyrinck , Gabriela de Castro et al.
Journal of Cachexia, Sarcopenia and Muscle, 2023, 14 (3), pp 1569-1582. ⟨10.1002/jcsm.13246⟩
Article dans une revue hal-04297548 v1

Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies

Katherine Kennedy , Marcus de Goffau , Maria Elisa Perez-Muñoz , Marie-Claire Arrieta , Fredrik Bäckhed et al.
Nature, 2023, 613 (7945), pp. 639-649. ⟨10.1038/s41586-022-05546-8⟩
Article dans une revue hal-04565252 v1
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A high-throughput sequencing approach identifies immunotherapeutic targets for bacterial meningitis in neonates

Stéphanie Pons , Eric Frapy , Youssouf Sereme , Charlotte Gaultier , François Lebreton et al.
EBioMedicine, 2023, 88, pp.104439. ⟨10.1016/j.ebiom.2023.104439⟩
Article dans une revue hal-03978239 v1

Neutrophils: from IBD to the gut microbiota

Camille Danne , Jurate Skerniskyte , Benoit Marteyn , Harry Sokol
Nature reviews. Gastroenterology & hepatology, 2023, 21 (3), pp.184-197. ⟨10.1038/s41575-023-00871-3⟩
Article dans une revue hal-04565293 v1

Role of adherent and invasive Escherichia coli in Crohn’s disease: lessons from the postoperative recurrence model

Anthony Buisson , Harry Sokol , Nassim Hammoudi , Stéphane Nancey , Xavier Treton et al.
Gut, 2023, 72 (1), pp.39 _+. ⟨10.1136/gutjnl-2021-325971⟩
Article dans une revue hal-03745296 v1

Targeting the gut microbiota in inflammatory bowel diseases: where are we?

Nicolas Benech , Harry Sokol
Current Opinion in Microbiology, 2023, 74, pp. 102319. ⟨10.1016/j.mib.2023.102319⟩
Article dans une revue hal-04565225 v1
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Antibiotic treatment using amoxicillin-clavulanic acid impairs gut mycobiota development through modification of the bacterial ecosystem

Madeleine Spatz , Gregory da Costa , Rebecka Ventin-Holmberg , Julien Planchais , Chloé Michaudel et al.
Microbiome, 2023, 11 (1), pp.73. ⟨10.1186/s40168-023-01516-y⟩
Article dans une revue hal-04225488 v1
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NLRP6 controls pulmonary inflammation from cigarette smoke in a gut microbiota-dependent manner

Mégane Nascimento , Sarah Huot-Marchand , Manoussa Fanny , Marjolène Straube , Marc Le Bert et al.
Frontiers in Immunology, 2023, 14, ⟨10.3389/fimmu.2023.1224383⟩
Article dans une revue hal-05396365 v1
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Genetic inhibition of CARD9 accelerates the development of atherosclerosis in mice through CD36 dependent-defective autophagy

Yujiao Zhang , Marie Vandestienne , Jean-Rémi Lavillegrand , Jeremie Joffre , Icia Santos-Zas et al.
Nature Communications, 2023, 14 (1), pp. 4622. ⟨10.1038/s41467-023-40216-x⟩
Article dans une revue hal-04565251 v1

Butyrate acts through HDAC inhibition to enhance aryl hydrocarbon receptor activation by gut microbiota-derived ligands

Morgane Modoux , Nathalie Rolhion , Jeremie Lefevre , Cyriane Oeuvray , Petr Nádvorník et al.
Gut microbes, 2022, 14 (1), pp. 2105637. ⟨10.1080/19490976.2022.2105637⟩
Article dans une revue hal-03973557 v1
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Fecal microbiota and bile acids in IBD patients undergoing screening for colorectal cancer

Aonghus Lavelle , Stéphane Nancey , Jean-Marie Reimund , David Laharie , Philippe Marteau et al.
Gut microbes, 2022, 14 (1), pp.1-18. ⟨10.1080/19490976.2022.2078620⟩
Article dans une revue hal-03815392 v1

Gut Microbiota Reprogramming of Tryptophan Metabolism During Pregnancy Shapes Host Insulin Resistance

Nicolas Benech , Nathalie Rolhion , Harry Sokol
Gastroenterology, 2022, 162 (6), pp.1587-1589. ⟨10.1053/j.gastro.2022.01.059⟩
Article dans une revue hal-03973539 v1
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Alteration of the gut microbiota’s composition and metabolic output correlates with COVID-19-like severity in obese NASH hamsters

Valentin Sencio , Nicolas Benech , Cyril Robil , Lucie Deruyter , Séverine Heumel et al.
Gut microbes, 2022, 14 (1), ⟨10.1080/19490976.2022.2100200⟩
Article dans une revue inserm-03741928 v1
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Long-term diosmectite use does not alter the gut microbiota in adults with chronic diarrhea

Kévin da Silva , Susie Guilly , Florence Thirion , Emmanuelle Le Chatelier , Nicolas Pons et al.
BMC Microbiology, 2022, 22 (1), pp. 54. ⟨10.1186/s12866-022-02464-7⟩
Article dans une revue inserm-03690762 v1
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CARD9 in neutrophils protects from colitis and controls mitochondrial metabolism and cell survival

Camille Danne , Chloé Michaudel , Jurate Skerniskyte , Julien Planchais , Aurélie Magniez et al.
Gut, 2022, pp.gutjnl-2022-326917. ⟨10.1136/gutjnl-2022-326917⟩
Article dans une revue hal-03791244 v2
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Impact of the Ileal microbiota on surgical site infections in Crohn’s disease: a nationwide prospective cohort

Clément Julien , Emré Anakok , Xavier Treton , Maria Nachury , Stéphane Nancey et al.
Journal of Crohn's and Colitis, 2022, 16 (8), pp.1211-1221. ⟨10.1093/ecco-jcc/jjac026⟩
Article dans une revue hal-03638385 v1

SER-109 for Recurrent Clostridioides difficile Infection

Nicolas Benech , Tatiana Galperine , Harry Sokol
New England Journal of Medicine, 2022, 386 (20), pp.1956-1958. ⟨10.1056/NEJMc2202493⟩
Article dans une revue hal-03998690 v1

Specific gut microbiota taxa as a key source of variability in colitis model

Nicolas Benech , Harry Sokol
Nature reviews. Gastroenterology & hepatology, 2022, 19 (8), pp.491-492. ⟨10.1038/s41575-022-00644-4⟩
Article dans une revue hal-03998724 v1
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Rewiring the altered tryptophan metabolism as a novel therapeutic strategy in inflammatory bowel diseases

Chloé Michaudel , Camille Danne , Allison Agus , Aurélie Magniez , Anne Aucouturier et al.
Gut, 2022, 1-12, pp.gutjnl-2022-327337. ⟨10.1136/gutjnl-2022-327337⟩
Article dans une revue hal-03859817 v2
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An appraisal of the frequency and severity of noninfectious manifestations in primary immunodeficiencies: A study of a national retrospective cohort of 1375 patients over 10 years

Mickaël Alligon , Nizar Mahlaoui , Virginie Courteille , Laurence Costes , Veronica Afonso et al.
Journal of Allergy and Clinical Immunology, 2022, 149 (6), pp.2116-2125. ⟨10.1016/j.jaci.2021.12.790⟩
Article dans une revue hal-03997839 v1
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Reduction in SARS-CoV-2 Virus Infectivity in Human and Hamster Feces

Sébastien Wurtzer , Sandra Lacote , Severine Murri , Philippe Marianneau , Elodie Monchatre-Leroy et al.
Viruses, 2022, 14 (8), pp.1777. ⟨10.3390/v14081777⟩
Article dans une revue anses-03790195 v1
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Human CD4+/CD8α+ regulatory T cells induced by Faecalibacterium prausnitzii protect against intestinal inflammation

Sothea Touch , Emmanuelle Godefroy , Nathalie Rolhion , Camille Danne , Cyriane Oeuvray et al.
JCI Insight, 2022, 7 (12), pp.e154722. ⟨10.1172/jci.insight.154722⟩
Article dans une revue hal-03664919 v1

Alteration of the gut microbiota’s composition and metabolic output correlates with COVID-19-like severity in obese NASH hamsters

Aleksejs Sazonovs , Christine Stevens , Guhan Venkataraman , Kai Yuan , Brandon Avila et al.
Gut microbes, 2022, 14 (1), pp.1275-1283. ⟨10.1038/s41588-022-01156-2⟩
Article dans une revue hal-03996541 v1

Understanding and predicting the efficacy of FMT

Aonghus Lavelle , Harry Sokol
Nature Medicine, 2022, 28 (9), pp.1759-1760. ⟨10.1038/s41591-022-01991-0⟩
Article dans une revue hal-04007369 v1

Patient knowledge of gut microbiota and acceptability of fecal microbiota transplantation in various diseases

Nicolas Benech , Pierre Legendre , Lise Radoszycki , Pasquale Varriale , Harry Sokol
Neurogastroenterology & Motility, 2022, 34 (8), ⟨10.1111/nmo.14320⟩
Article dans une revue hal-03998698 v1
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FFCD 1709-SIRTCI phase II trial: Selective internal radiation therapy plus Xelox, Bevacizumab and Atezolizumab in liver-dominant metastatic colorectal cancer

Violaine Randrian , Simon Pernot , Karine Le Malicot , Vittorio Catena , Isabelle Baumgaertner et al.
Digestive and Liver Disease, 2022, 54 (7), pp.857-863. ⟨10.1016/j.dld.2022.04.024⟩
Article dans une revue hal-03906999 v1

An appraisal of the frequency and severity of noninfectious manifestations in primary immunodeficiencies: A study of a national retrospective cohort of 1375 patients over 10 years

Mickaël Alligon , Nizar Mahlaoui , Virginie Courteille , Laurence Costes , Veronica Afonso et al.
Journal of Allergy and Clinical Immunology, 2022, 149 (6), pp.2116-2125. ⟨10.1016/j.jaci.2021.12.790⟩
Article dans une revue hal-03886941 v1
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AhR/IL-22 pathway as new target for the treatment of post-infectious irritable bowel syndrome symptoms

Maëva Meynier , Elodie Baudu , Nathalie Rolhion , Manon Defaye , Marjolène Straube et al.
Gut microbes, 2022, 14 (1), pp.1-21. ⟨10.1080/19490976.2021.2022997⟩
Article dans une revue hal-03555153 v1
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Low-dose IL-2 shapes a tolerogenic gut microbiota that improves autoimmunity and gut inflammation

Nicolas Tchitchek , Otriv Nguekap Tchoumba , Gabriel Pires , Sarah Dandou , Julien Campagne et al.
JCI Insight, 2022, 7 (17), ⟨10.1172/jci.insight.159406⟩
Article dans une revue hal-03797609 v1

Evolution of FMT – From early clinical to standardized treatments

Stephanie Servetas , Phillip Daschner , Cyril Guyard , Vincent Thomas , Herve Affagard et al.
Biologicals, 2022, 76, pp.31-35. ⟨10.1016/j.biologicals.2022.01.004⟩
Article dans une revue hal-03970742 v1

C-reactive protein values after surgery for inflammatory bowel disease: is it still a good marker for intra-abdominal complication? A retrospective cohort study of 347 procedures

Gaspard Bouteloup , Jérémie Lefevre , Alexandre Challine , Thibault Voron , Lauren O’connell et al.
International Journal of Colorectal Disease, 2022, 37 (11), pp.2347-2356. ⟨10.1007/s00384-022-04259-8⟩
Article dans une revue hal-03997947 v1
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Effects of Five Filamentous Fungi Used in Food Processes on In Vitro and In Vivo Gut Inflammation

Maxime Poirier , Cindy Hugot , Madeleine Spatz , Gregory da Costa , Alexia Lapiere et al.
Journal of Fungi, 2022, 8 (9), pp. 893. ⟨10.3390/jof8090893⟩
Article dans une revue hal-03795044 v1
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Validation of the Performance of A1HPV6, a Triage Blood Test for the Early Diagnosis and Prognosis of SARS-CoV-2 Infection

Pauline Maisonnasse , Thierry Poynard , Mehdi Sakka , Sepideh Akhavan , Romain Marlin et al.
Gastro Hep Advances, 2022, 1 (3), pp.393--402. ⟨10.1016/j.gastha.2021.12.009⟩
Article dans une revue hal-03793486 v1
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Deletion of both Dectin-1 and Dectin-2 affects the bacterial but not fungal gut microbiota and susceptibility to colitis in mice

Yazhou Wang , Madeleine Spatz , Gregory da Costa , Chloé Michaudel , Alexia Lapiere et al.
Microbiome, 2022, 10, pp.1-17. ⟨10.1186/s40168-022-01273-4⟩
Article dans une revue hal-03806427 v1
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Microbiota in neuroinflammation and synaptic dysfunction: a focus on Alzheimer’s disease

Diane Bairamian , Sha Sha , Nathalie Rolhion , Harry Sokol , Guillaume Dorothée et al.
Molecular Neurodegeneration, 2022, 17 (1), pp.19. ⟨10.1186/s13024-022-00522-2⟩
Article dans une revue hal-03702829 v1
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Age-associated gut microbiota impair hippocampus-dependent memory in a vagus-dependent manner

Damien Rei , Soham Saha , Marianne Haddad , Anna Haider Rubio , Blanca Liliana Perlaza et al.
JCI Insight, 2022, 7 (15), pp.e147700. ⟨10.1172/jci.insight.147700⟩
Article dans une revue pasteur-03888764 v1
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Pembrolizumab with Capox Bevacizumab in patients with microsatellite stable metastatic colorectal cancer and a high immune infiltrate: The FFCD 1703-POCHI trial

Claire Gallois , Jean-François Emile , Stefano Kim , Carole Monterymard , Marine Gilabert et al.
Digestive and Liver Disease, 2021, 53 (10), pp.1254-1259. ⟨10.1016/j.dld.2021.06.009⟩
Article dans une revue hal-03283091 v1
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Gut microbiota-derived metabolites as central regulators in metabolic disorders

Allison Agus , Karine Clément , Harry Sokol
Gut, 2021, 70 (6), pp.1174-1182. ⟨10.1136/gutjnl-2020-323071⟩
Article dans une revue hal-03251679 v1

A standardised model for stool banking for faecal microbiota transplantation: a consensus report from a multidisciplinary UEG working group

Josbert J Keller , Rogier E Ooijevaar , Christian L Hvas , Elisabeth M Terveer , Simone C Lieberknecht et al.
United European Gastroenterology Journal, 2021, 9 (2), pp.229-247. ⟨10.1177/2050640620967898⟩
Article dans une revue inserm-02996890 v1
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Immune-mediated inflammatory diseases and nutrition: results from an online survey on patients’ practices and perceptions

Thao Pham , Harry Sokol , Bruno Halioua , Graziella Pourcel , Manuel Brun et al.
BMC Nutrition, 2021, 7 (1), pp.38. ⟨10.1186/s40795-021-00446-y⟩
Article dans une revue hal-03290728 v1
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Butyrate, a new microbiota-dependent player in CD8+ T cells immunity and cancer therapy?

Camille Danne , Harry Sokol
Cell Reports Medicine, 2021, 2 (7), pp.100328. ⟨10.1016/j.xcrm.2021.100328⟩
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Recipient factors in faecal microbiota transplantation: one stool does not fit all

Camille Danne , Nathalie Rolhion , Harry Sokol
Nature reviews. Gastroenterology & hepatology, 2021, 18 (7), p. 503-513. ⟨10.1038/s41575-021-00441-5⟩
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The use of Faecal Microbiota Transplantation (FMT) in Europe : A Europe-wide survey

Simon Mark Dahl Baunwall , Elisabeth M Terveer , Jens Frederik Dahlerup , Christian Erikstrup , Perttu Arkkila et al.
The Lancet Regional Health - Europe, 2021, 9, pp. 1-8. ⟨10.1016/j.lanepe.2021.100181⟩
Article dans une revue hal-03833430 v1

SARS-CoV-2 vaccines and donor recruitment for FMT

Gianluca Ianiro , Benjamin Mullish , Christian Lodberg Hvas , Jonathan Segal , Ed Kuijper et al.
The Lancet Gastroenterology & Hepatology, 2021, 6 (4), pp.264-266. ⟨10.1016/S2468-1253(21)00032-7⟩
Article dans une revue hal-03361260 v1
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Osteoarthritis and Gut Microbiome

Marie Binvignat , Harry Sokol , Encarnita Mariotti-Ferrandiz , Francis Berenbaum , Jérémie Sellam
Joint Bone Spine, In press, ⟨10.1016/j.jbspin.2021.105203⟩
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Alteration of the gut microbiota following SARS-CoV-2 infection correlates with disease severity in hamsters

Valentin Sencio , Arnaud Machelart , Cyril Robil , Nicolas Benech , Eik Hoffmann et al.
Gut microbes, 2021, 14 (1), ⟨10.1080/19490976.2021.2018900⟩
Article dans une revue hal-03518769 v1
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Gut microbiota-derived short-chain fatty acids regulate IL-17 production by mouse and human intestinal γδ T cells

Louise Dupraz , Aurélie Magniez , Nathalie Rolhion , Mathias L Richard , Grégory da Costa et al.
Cell Reports, 2021, 36 (1), pp.109332. ⟨10.1016/j.celrep.2021.109332⟩
Article dans une revue hal-03282473 v1

Tryptophan metabolites get the gut moving

Nicolas Benech , Nathalie Rolhion , Harry Sokol
Cell Host & Microbe, 2021, 29 (2), pp.145-147. ⟨10.1016/j.chom.2021.01.009⟩
Article dans une revue hal-03973536 v1

Infections in Patients with Chronic Granulomatous Disease Treated with Tumor Necrosis Factor Alpha Blockers for Inflammatory Complications

Anne Conrad , Bénédicte Neven , Nizar Mahlaoui , Felipe Suarez , Harry Sokol et al.
Journal of Clinical Immunology, 2021, 41 (1), pp.185-193. ⟨10.1007/s10875-020-00901-8⟩
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A Scoring System to Determine Patients' Risk of Colectomy Within 1 Year After Hospital Admission for Acute Severe Ulcerative Colitis Short title: Predictors of colectomy in patients with ASUC

Guillaume Le Baut , Julien Kirchgesner , Aurélien Amiot , Jérémie H Lefevre , Najim Chafai et al.
Clinical Gastroenterology and Hepatology, 2021, 19 (8), pp.1602-1610.e1. ⟨10.1016/j.cgh.2019.12.036⟩
Article dans une revue hal-03390913 v1
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Circulating bile acids concentration is predictive of coronary artery disease in human

Caroline Chong Nguyen , Denis Duboc , Dominique Rainteau , Harry Sokol , Lydie Humbert et al.
Scientific Reports, 2021, 11, pp.22661. ⟨10.1038/s41598-021-02144-y⟩
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SARS-CoV-2 infection in nonhuman primates alters the composition and functional activity of the gut microbiota

Harry Sokol , Vanessa Contreras , Pauline Maisonnasse , Aurore Desmons , Benoit Delache et al.
Gut microbes, 2021, 13 (1), ⟨10.1080/19490976.2021.1893113⟩
Article dans une revue hal-03973569 v1
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Tryptophan Metabolism as a Pharmacological Target

Morgane Modoux , Nathalie Rolhion , Sridhar Mani , Harry Sokol
Trends in Pharmacological Sciences, 2021, 42 (1), pp.60-73. ⟨10.1016/j.tips.2020.11.006⟩
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Postbiotics — when simplification fails to clarify

José Eleazar Aguilar-Toalá , Stefania Arioli , Pradip Behare , Clara Belzer , Roberto Berni Canani et al.
Nature reviews. Gastroenterology & hepatology, 2021, 18 (11), pp. 825-826. ⟨10.1038/s41575-021-00521-6⟩
Article dans une revue hal-03793765 v1
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Blockage of bacterial FimH prevents mucosal inflammation associated with Crohn’s disease

Grégoire Chevalier , Arnaud Laveissière , Guillaume Desachy , Nicolas Barnich , Adeline Sivignon et al.
Microbiome, 2021, 9 (1), pp.1-16. ⟨10.1186/s40168-021-01135-5⟩
Article dans une revue hal-03352896 v1
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PRODIGE 59-DURIGAST trial: A randomised phase II study evaluating FOLFIRI + Durvalumab ± Tremelimumab in second-line of patients with advanced gastric cancer

Camille Evrard , Christophe Louvet , Farid El Hajbi , Frédéric Di Fiore , Karine Le Malicot et al.
Digestive and Liver Disease, 2021, 53 (4), pp.420-426. ⟨10.1016/j.dld.2020.11.036⟩
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Impact of gut fungal and bacterial communities on the outcome of allogeneic hematopoietic cell transplantation

Florent Malard , Aonghus Lavelle , Giorgia Battipaglia , Béatrice Gaugler , Rémy Dulery et al.
Mucosal Immunology, 2021, 14 (5), pp.1127-1132. ⟨10.1038/s41385-021-00429-z⟩
Article dans une revue hal-03973554 v1
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SARS-CoV-2 infection in nonhuman primates alters the composition and functional activity of the gut microbiota

Harry Sokol , Vanessa Contreras , Pauline Maisonnasse , Aurore Desmons , Benoit Delache et al.
Gut microbes, 2021, 13 (1), pp.1 - 19. ⟨10.1080/19490976.2021.1893113⟩
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Tryptophan Metabolism as a Pharmacological Target

Morgane Modoux , Nathalie Rolhion , Sridhar Mani , Harry Sokol
Trends in Pharmacological Sciences, 2021, 42 (1), pp.60-73. ⟨10.1016/j.tips.2020.11.006⟩
Article dans une revue hal-03973562 v1
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Microbiota tryptophan metabolism induces aryl hydrocarbon receptor activation and improves alcohol-induced liver injury

Laura Wrzosek , Dragos Ciocan , Cindy Hugot , Madeleine Spatz , Margot Dupeux et al.
Gut, 2021, 70 (7), pp.1299-1308. ⟨10.1136/gutjnl-2020-321565⟩
Article dans une revue hal-03329872 v2
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The IBD-disk is a reliable tool to assess the daily-life burden of patients with inflammatory bowel disease

Sara Tadbiri , Maria Nachury , Yoram Bouhnik , Mélanie Serrero , Xavier Hebuterne et al.
Journal of Crohn's and Colitis, 2021, 15 (5), pp.766-773. ⟨10.1093/ecco-jcc/jjaa244⟩
Article dans une revue hal-03038348 v1
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Aryl hydrocarbon receptor ligand production by the gut microbiota: a new therapeutic target in celiac disease

Bruno Lamas , Leticia Hernandez-Galan , Heather J Galipeau , Marco Constante , Alexandra Clarizio et al.
Science Translational Medicine, 2020, 12 (566), pp.eaba0624. ⟨10.1126/scitranslmed.aba0624⟩
Article dans une revue hal-02997620 v1
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Patients atteints d’un cancer gastrique localisé MSI/dMMR, pas de chimiothérapie mais une immunothérapie périopératoire : l’essai de phase II GERCOR NEONIPIGA vient d’être ouvert au recrutement

Romain Cohen , Thomas Pudlarz , Marie-Line Garcia-Larnicol , Dewi Vernerey , Xavier Dray et al.
Bulletin du Cancer, 2020, 107 (4), pp.438-446. ⟨10.1016/j.bulcan.2019.11.016⟩
Article dans une revue hal-02995557 v1
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Expert centres for faecal microbiota transplantation: The guarantee for safe and effective use of faecal transplants

Nicolas Benech , Harry Sokol
United European Gastroenterology Journal, 2020, 8 (10), p. 1145-1146. ⟨10.1177/2050640620970372⟩
Article dans une revue hal-03170840 v1
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Drug Mimicry: Promiscuous Receptors PXR and AhR, and Microbial Metabolite Interactions in the Intestine

Zdeněk Dvořák , Harry Sokol , Sridhar Mani
Trends in Pharmacological Sciences, 2020, 41 (12), pp.900-908. ⟨10.1016/j.tips.2020.09.013⟩
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Gut microbiota-derived metabolites as key actors in inflammatory bowel disease

Aonghus Lavelle , Harry Sokol
Nature reviews. Gastroenterology & hepatology, 2020, 17 (4), pp.223-237. ⟨10.1038/s41575-019-0258-z⟩
Article dans une revue hal-04007179 v1
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Tofacitinib treatment alters mucosal immunity and gut microbiota during experimental arthritis

Julie Hablot , Maroua Ferhat , Aonghus Lavelle , Fatouma Salem , Mahdia Taieb et al.
Clinical and Translational Medicine, 2020, 10 (5), pp.e163. ⟨10.1002/ctm2.163⟩
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The enemy from within: a prophage of Roseburia intestinalis systematically turns lytic in the mouse gut, driving bacterial adaptation by CRISPR spacer acquisition

Jeffrey Cornuault , Elisabeth Moncaut , Valentin Loux , Aurélie Mathieu , Harry Sokol et al.
The International Society of Microbiologial Ecology Journal, 2020, 14 (3), pp.771-787. ⟨10.1038/s41396-019-0566-x⟩
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Characterising the loss-of-function impact of 5’ untranslated region variants in 15,708 individuals

Nicola Whiffin , Konrad Karczewski , Xiaolei Zhang , Sonia Chothani , Miriam Smith et al.
Nature Communications, 2020, 11 (1), pp.2523. ⟨10.1038/s41467-019-10717-9⟩
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A clinical decision support tool may help to optimise vedolizumab therapy in Crohn's disease

Parambir S. Dulai , Aurélien Amiot , Laurent Peyrin-Biroulet , Vipul Jairaith , Mélanie Serrero et al.
Alimentary Pharmacology and Therapeutics, 2020, 51 (5), pp.553-564. ⟨10.1111/apt.15609⟩
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Increased risk of permanent stoma in Crohn’s disease associated with hidradenitis suppurativa: a case-control study

Louis-Marie Dumont , Cécilia Landman , Harry Sokol , Laurent Beaugerie , Jacques Cosnes et al.
Alimentary Pharmacology & Therapeutics (Suppl), 2020, 52 (2), pp.303-310. ⟨10.1111/apt.15863⟩
Article dans une revue hal-04007071 v1
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Fecal microbiota transplantation to maintain remission in Crohn’s disease: a pilot randomized controlled study

Harry Sokol , Cecilia Landman , Philippe Seksik , Laurence Berard , Mélissa Montil et al.
Microbiome, 2020, 8 (12), ⟨10.1186/s40168-020-0792-5⟩
Article dans une revue hal-03031236 v1
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Impact of fecal microbiota transplantation on chronic recurrent pouchitis in ulcerative colitis with ileo-anal anastomosis: study protocol for a prospective, multicenter, double-blind, randomized, controlled trial

Caroline Trang-Poisson , Elise Kerdreux , Alexandra Poinas , Lucie Planche , Harry Sokol et al.
Trials, 2020, 21 (1), ⟨10.1186/s13063-020-04330-1⟩
Article dans une revue hal-03379520 v1

Dendritic cell–derived hepcidin sequesters iron from the microbiota to promote mucosal healing

Nicholas Bessman , Jacques Mathieu , Cyril Renassia , Lei Zhou , Thomas Fung et al.
Science, 2020, 368 (6487), pp.186-189. ⟨10.1126/science.aau6481⟩
Article dans une revue hal-03998728 v1

Dendritic cell–derived hepcidin sequesters iron from the microbiota to promote mucosal healing

Nicholas Bessman , Jacques Mathieu , Cyril Renassia , Lei Zhou , Thomas Fung et al.
Science, 2020, 368 (6487), pp.186-189. ⟨10.1126/science.aau6481⟩
Article dans une revue hal-03998740 v1
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Ozone-Induced Aryl Hydrocarbon Receptor Activation Controls Lung Inflammation via Interleukin-22 Modulation

Chloé Michaudel , Florent Bataille , Isabelle Maillet , Louis Fauconnier , Cyril Colas et al.
Frontiers in Immunology, 2020, 11, ⟨10.3389/fimmu.2020.00144⟩
Article dans une revue hal-03008360 v1
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Potential causes and consequences of gastrointestinal disorders during a SARS-CoV-2 infection

François Trottein , Harry Sokol
Cell Reports, 2020, 32 (3), pp.107915. ⟨10.1016/j.celrep.2020.107915⟩
Article dans une revue hal-02934850 v1

Human microbial metabolite mimicry as a strategy to expand the chemical space of potential drugs

Hao Li , Harmit Ranhotra , Sridhar Mani , Zdeněk Dvořák , Harry Sokol et al.
Drug Discovery Today, 2020, 25 (9), pp.1575-1579. ⟨10.1016/j.drudis.2020.06.007⟩
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Association Between Microscopic Lesions at Ileal Resection Margin and Recurrence After Surgery in Patients With Crohn’s Disease

Nassim Hammoudi , Dominique Cazals-Hatem , Claire Auzolle , Charlotte Gardair , Marjolaine Ngollo et al.
Clinical Gastroenterology and Hepatology, 2020, 18 (1), pp.141-149.e2. ⟨10.1016/j.cgh.2019.04.045⟩
Article dans une revue hal-03997911 v1

A structural variation reference for medical and population genetics

Ryan Collins , Harrison Brand , Konrad Karczewski , Xuefang Zhao , Jessica Alföldi et al.
Nature, 2020, 581 (7809), pp.444-451. ⟨10.1038/s41586-020-2287-8⟩
Article dans une revue hal-03997872 v1

Glycans as Immune Checkpoints: Removal of Branched N-glycans Enhances Immune Recognition Preventing Cancer Progression

Mariana Silva , Ângela Fernandes , Maria Oliveira , Carlos Resende , Alexandra Correia et al.
Cancer Immunology Research, 2020, 8 (11), pp.1407-1425. ⟨10.1158/2326-6066.CIR-20-0264⟩
Article dans une revue hal-03341273 v1

The enemy from within: a prophage of Roseburia intestinalis systematically turns lytic in the mouse gut, driving bacterial adaptation by CRISPR spacer acquisition

Jeffrey Cornuault , Elisabeth Moncaut , Valentin Loux , Aurélie Mathieu , Harry Sokol et al.
The International Society of Microbiologial Ecology Journal, 2020, 14 (3), pp.771-787. ⟨10.1038/s41396-019-0566-x⟩
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Screening of faecal microbiota transplant donors during the COVID-19 outbreak: suggestions for urgent updates from an international expert panel

Gianluca Ianiro , Benjamin H Mullish , Colleen R Kelly , Harry Sokol , Zain Kassam et al.
The Lancet Gastroenterology & Hepatology, 2020, ⟨10.1016/S2468-1253(20)30082-0⟩
Article dans une revue inserm-02519897 v1
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The Gut Microbiota at the Service of Immunometabolism

Chloé Michaudel , Harry Sokol
Cell Metabolism, 2020, 32 (4), pp.514-523. ⟨10.1016/j.cmet.2020.09.004⟩
Article dans une revue hal-02997641 v1

Gut microbiota in PSC : From association to possible causality. Commentary to “Gut pathobionts underlie intestinal barrier dysfunction and liver T helper 17 cell immune response in primary sclerosing cholangitis” by Nakamoto et al., Nature Microbiology, January 2019

Sara Lemoinne , Joao Sabino , Harry Sokol
Clinics and Research in Hepatology and Gastroenterology, 2020, 44 (2), pp.123-125. ⟨10.1016/j.clinre.2019.06.005⟩
Article dans une revue hal-02945772 v1
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Linking Strain Engraftment in Fecal Microbiota Transplantation With Maintenance of Remission in Crohn’s Disease

Lingjia Kong , Jason Lloyd-Price , Tommi Vatanen , Philippe Seksik , Laurent Beaugerie et al.
Gastroenterology, 2020, ⟨10.1053/j.gastro.2020.08.045⟩
Article dans une revue hal-03030862 v1

Antibiotics: a trigger for inflammatory bowel disease?

Harry Sokol
The Lancet Gastroenterology & Hepatology, 2020, 5 (11), pp.956-957. ⟨10.1016/S2468-1253(20)30208-9⟩
Article dans une revue hal-03997907 v1
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Nancy Index Scores of Chronic Inflammatory Bowel Disease Activity Associate With Development of Colorectal Neoplasia

Julien Kirchgesner , Magali Svrcek , Guillaume Le Gall , Cécilia Landman , Xavier Dray et al.
Clinical Gastroenterology and Hepatology, 2020, 18 (1), pp.150-157.e1. ⟨10.1016/j.cgh.2019.05.002⟩
Article dans une revue hal-03347328 v1

Donated stool for faecal microbiota transplantation is not a drug, but guidance and regulation are needed

Josbert Keller , Maria Jgt Vehreschild , Christian Hvas , Simon Md Jørgensen , Juozas Kupcinskas et al.
United European Gastroenterology Journal, 2020, 8 (3), pp.353-354. ⟨10.1177/2050640620910847⟩
Article dans une revue hal-04000054 v1

Prominence of ileal mucosa-associated microbiota to predict postoperative endoscopic recurrence in Crohn’s disease

Harry Sokol , Loic Brot , Carmen Stefanescu , Claire Auzolle , Nicolas Barnich et al.
Gut, 2020, 69 (3), pp.462-472. ⟨10.1136/gutjnl-2019-318719⟩
Article dans une revue hal-04948240 v1

Fecal microbiota transplantation in gastrointestinal disorders: time for precision medicine

Nicolas Benech , Harry Sokol
Genome Medicine, 2020, 12 (1), pp.58. ⟨10.1186/s13073-020-00757-y⟩
Article dans une revue hal-03998718 v1

Butyrate mediates anti-inflammatory effects of Faecalibacterium prausnitzii in intestinal epithelial cells through Dact3

Marion Lenoir , Rebeca Martín , Edgar Torres-Maravilla , Sead Chadi , Pamela González-Dávila et al.
Gut microbes, 2020, 12 (1), pp.1826748. ⟨10.1080/19490976.2020.1826748⟩
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Prominence of ileal mucosa-associated microbiota to predict postoperative endoscopic recurrence in Crohn’s disease

Harry Sokol , Loic Brot , Carmen Stefanescu , Claire Auzolle , Nicolas Barnich et al.
Gut, 2020, 69 (3), pp.462-472. ⟨10.1136/gutjnl-2019-318719⟩
Article dans une revue hal-02193634 v1

A necessary discussion after transmission of multidrug-resistant organisms through faecal microbiota transplantations

Ed Kuijper , Jessica Allegretii , Peter Hawkey , Harry Sokol , Simon Goldenberg et al.
The Lancet Infectious Diseases, 2019, 19 (11), pp.1161-1162. ⟨10.1016/S1473-3099(19)30545-6⟩
Article dans une revue hal-03997866 v1

Fecal Microbiota Transplantation for Ulcerative Colitis

Nicolas Benech , Nathalie Kapel , Harry Sokol
JAMA Cardiology, 2019, 321 (22), pp.2240. ⟨10.1001/jama.2019.3946⟩
Article dans une revue hal-03998695 v1
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Tryptophan and metabolic syndrome, a new challenge for health

Allison Agus , Harry Sokol
Médecine/Sciences, 2019, 35 (3), pp.1-3. ⟨10.1051/medsci/2019040⟩
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The regenerating family member 3 β instigates IL-17A-mediated neutrophil recruitment downstream of NOD1/2 signalling for controlling colonisation resistance independently of microbiota community structure

Nadine Waldschmitt , Sho Kitamoto , Thomas Secher , Vassiliki Zacharioudaki , Olivier Boulard et al.
Gut, 2019, 68 (7), pp.1190-1199. ⟨10.1136/gutjnl-2018-316757⟩
Article dans une revue hal-02126570 v1
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Specific changes in faecal microbiota are associated with familial Mediterranean fever

Samuel Deshayes , Soraya Fellahi , Jean-Philippe Bastard , Jean-Marie Launay , Jacques Callebert et al.
Annals of the Rheumatic Diseases, 2019, 78 (10), pp.1398-1404. ⟨10.1136/annrheumdis-2019-215258⟩
Article dans une revue hal-02291701 v1
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Validation of a global quantitative analysis methodology of tryptophan metabolites in mice using LC-MS

Antoine Lefèvre , Sylvie Mavel , Lydie Nadal-Desbarats , Laurent Galineau , Sylvie Attucci et al.
Talanta, 2019, 195, pp.593-598. ⟨10.1016/j.talanta.2018.11.094⟩
Article dans une revue hal-02291264 v3
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Faecalibacterium prausnitzii Skews Human DC to Prime IL10-Producing T Cells Through TLR2/6/JNK Signaling and IL-10, IL-27, CD39, and IDO-1 Induction

Joudy Alameddine , Emmanuelle Godefroy , Loukas Papargyris , Guillaume Sarrabayrouse , Julie Tabiasco et al.
Frontiers in Immunology, 2019, 10, pp.143. ⟨10.3389/fimmu.2019.00143⟩
Article dans une revue hal-02024916 v1

Gut microbiome alterations in anti‐NMDA receptor encephalitis: caveats for result interpretation

Giulia Berzero , Dimitri Psimaras , Nicolas Weiss , Harry Sokol , Agusti Alentorn
Annals of Clinical and Translational Neurology, 2019, 7, pp.153-154. ⟨10.1002/acn3.50969⟩
Article dans une revue hal-02950669 v1
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Fecal microbiota transplantation before or after allogeneic hematopoietic transplantation in patients with hematologic malignancies carrying multidrug-resistance bacteria

Giorgia Battipaglia , Florent Malard , Marie Thérèse Rubio , Annalisa Ruggeri , Anne Claire Mamez et al.
Haematologica, 2019, 104 (8), pp.1682-1688. ⟨10.3324/haematol.2018.198549⟩
Article dans une revue hal-02283788 v1
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Baseline microbiota composition modulates antibiotic-mediated effects on the gut microbiota and host

Aonghus Lavelle , Thomas Walter Hoffmann , Hang-Phuong Pham , Philippe Langella , Eric Guédon et al.
Microbiome, 2019, 7 (111), ⟨10.1186/s40168-019-0725-3⟩
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Roux-en-Y Gastric-Bypass and sleeve gastrectomy induces specific shifts of the gut microbiota without altering the metabolism of bile acids in the intestinal lumen

Henri Duboc , Caroline Chong Nguyen , Jean-Baptiste Cavin , Lara Ribeiro-Parenti , Anne-Charlotte Jarry et al.
International Journal of Obesity, 2019, 43 (2), pp.428-431. ⟨10.1038/s41366-018-0015-3⟩
Article dans une revue inserm-02016619 v1
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Fungi participate in the dysbiosis of gut microbiota in patients with primary sclerosing cholangitis

Sara Lemoinne , Astrid Kemgang , Karima Ben Belkacem , Marjolene Straube , Sarah Jegou et al.
Gut, 2019, pp. gutjnl-2018-317791. ⟨10.1136/gutjnl-2018-317791⟩
Article dans une revue hal-02116096 v1

International consensus conference on stool banking for faecal microbiota transplantation in clinical practice

Giovanni Cammarota , Gianluca Ianiro , Colleen Kelly , Benjamin Mullish , Jessica Allegretti et al.
Gut, 2019, 68 (12), pp.2111-2121. ⟨10.1136/gutjnl-2019-319548⟩
Article dans une revue hal-02983798 v1
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Association Between Microscopic Lesions at Ileal Resection Margin and Recurrence After Surgery in Patients With Crohn’s Disease

Nassim Hammoudi , Dominique Cazals-Hatem , Claire Auzolle , Charlotte Gardair , Marjolaine Ngollo et al.
Clinical Gastroenterology and Hepatology, 2019, ⟨10.1016/j.cgh.2019.04.045⟩
Article dans une revue hal-02193633 v1
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Genetic effects on the commensal microbiota in inflammatory bowel disease patients

Hugues Aschard , Vincent Laville , Eric Tchetgen Tchetgen , Dan Knights , Floris Imhann et al.
PLoS Genetics, 2019, 15 (3), pp.e1008018. ⟨10.1371/journal.pgen.1008018⟩
Article dans une revue pasteur-03278619 v1
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Intestinal dysbiosis in Inflammatory Bowel Disease associated with primary immunodeficiency.

Harry Sokol , Nizar Mahlaoui , Claire Aguilar , Perrine Bach , Olivier Join-Lambert et al.
Journal of Allergy and Clinical Immunology, 2019, 143 (2), pp.1-10. ⟨10.1016/j.jaci.2018.09.021⟩
Article dans une revue hal-01913759 v1

Bacteria engineered to produce IL-22 in intestine induce expression of REG3G to reduce ethanol-induced liver disease in mice

Tim Hendrikx , Yi Duan , Yanhan Wang , Jee-Hwan Oh , Laura Alexander et al.
Gut, 2019, 68 (8), pp.1504-1515. ⟨10.1136/gutjnl-2018-317232⟩
Article dans une revue hal-02638448 v1

Oral delivery of pancreatitis‐associated protein by Lactococcus lactis displays protective effects in dnbs‐induced colitis model and is able to modulate the composition of the microbiota

Natalia Martins Breyner , Priscilla Carolinne Bagano Vilas Boas , Gabriel Fernandes , Rodrigo D Carvalho , Tatiana Rochat et al.
Environmental Microbiology, 2019, ⟨10.1111/1462-2920.14748⟩
Article dans une revue hal-02619641 v1

T cell clonal expansions in ileal Crohn’s disease are associated with smoking behaviour and postoperative recurrence

Matthieu Allez , Claire Auzolle , Marjolaine Ngollo , Hugo Bottois , Victor Chardiny et al.
Gut, 2019, 9 (1), pp.gutjnl-2018-317878. ⟨10.1136/gutjnl-2018-317878⟩
Article dans une revue hal-02193601 v1
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Increased incidence of systemic serious viral infections in patients with inflammatory bowel disease associates with active disease and use of thiopurines

Andrew Wisniewski , Julien Kirchgesner , Philippe Seksik , Cécilia Landman , Anne Bourrier et al.
United European Gastroenterology Journal, In press, ⟨10.1177/2050640619889763⟩
Article dans une revue hal-02405530 v1

Oral delivery of pancreatitis‐associated protein by Lactococcus lactis displays protective effects in dinitro‐benzenesulfonic‐acid‐induced colitis model and is able to modulate the composition of the microbiota

Natalia Breyner , Priscilla Bagano Vilas Boas , Gabriel Fernandes , Rodrigo Carvalho , Tatiana Rochat et al.
Environmental Microbiology, 2019, 21 (11), pp. 4020-4031. ⟨10.1111/1462-2920.14748⟩
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Fecal microbiota transplantation before or after allogeneic hematopoietic transplantation in patients with hematologic malignancies carrying multidrug-resistance bacteria

Giorgia Battipaglia , Florent Malard , Marie Therèse Rubio , Annalisa Ruggeri , Anne Claire Mamez et al.
Haematologica, 2019, 104 (8), pp.1682-1688. ⟨10.3324/haematol.2018.198549⟩
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Association of Genetic Variants in NUDT15 With Thiopurine-Induced Myelosuppression in Patients With Inflammatory Bowel Disease

Gareth Walker , James Harrison , Graham Heap , Michiel Voskuil , Vibeke Andersen et al.
JAMA Cardiology, 2019, 321 (8), pp.773. ⟨10.1001/jama.2019.0709⟩
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Stool for fecal microbiota transplantation should be classified as a transplant product and not as a drug

Josbert J Keller , Maria Jgt Vehreschild , Christian L Hvas , Simon Md Jørgensen , Jouzas Kupciskas et al.
United European Gastroenterology Journal, 2019, 7 (10), pp.1408-1410. ⟨10.1177/2050640619887579⟩
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The gut mycobiota: insights into analysis, environmental interactions and role in gastrointestinal diseases

Mathias Lavie-Richard , Harry Sokol
Nature reviews. Gastroenterology & hepatology, 2019, 16 (6), pp.331-345. ⟨10.1038/s41575-019-0121-2⟩
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Enterobacteriaceae are essential for the modulation of colitis severity by fungi

Bruno Sovran , Julien Planchais , Sarah Jegou , Marjolene Straube , Bruno Lamas et al.
Microbiome, 2018, 6, pp.152. ⟨10.1186/s40168-018-0538-9⟩
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Aryl hydrocarbon receptor and intestinal immunity

Bruno Lamas , Jane Natividad , Harry Sokol
Mucosal Immunology, 2018, 11 (4), pp. 1024-1038. ⟨10.1038/s41385-018-0019-2⟩
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Differences in epidemiological features between ulcerative colitis and Crohn’s disease: The early life-programmed versus late dysbiosis hypothesis

Laurent Beaugerie , Ebbe Langholz , Nynne Nyboe-Andersen , Benedicte Pigneur , Harry Sokol
Medical Hypotheses, 2018, 115, pp.19-21. ⟨10.1016/j.mehy.2018.03.009⟩
Article dans une revue hal-01961997 v1
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A Versatile New Model of Chemically Induced Chronic Colitis Using an Outbred Murine Strain

Monica Barone , Florian Chain , Harry Sokol , Patrizia Brigidi , Luis G Bermúdez-Humarán et al.
Frontiers in Microbiology, 2018, 9, pp.565. ⟨10.3389/fmicb.2018.00565⟩
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Impaired Aryl Hydrocarbon Receptor Ligand Production by the Gut Microbiota Is a Key Factor in Metabolic Syndrome

Jane Natividad , Allison Agus , Julien Planchais , Bruno Lamas , Anne Charlotte Jarry et al.
Cell Metabolism, In press, ⟨10.1016/j.cmet.2018.07.001⟩
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Le microbiote intestinal : quels impacts sur la carcinogenèse et le traitement du cancer colorectal ?

Antoine Bruneau , Minh-Tam Baylatry , Anne Christine Joly , Harry Sokol
Bulletin du Cancer, 2018, 105 (1), pp.70-80. ⟨10.1016/j.bulcan.2017.10.025⟩
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Clinical activity is an independent risk factor of ischemic heart and cerebrovascular arterial disease in patients with inflammatory bowel disease

Guillaume Le Gall , Julien Kirchgesner , Mohamed Bejaoui , Cecilia Landman , Isabelle Nion-Larmurier et al.
PLoS ONE, 2018, 13 (8), pp.e0201991. ⟨10.1371/journal.pone.0201991⟩
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Gut Microbiota-Stimulated Innate Lymphoid Cells Support β-defensin 14 Expression in Pancreatic Endocrine Cells Preventing Autoimmune Diabetes

Michela Miani , Julie Le Naour , Emmanuelle Waeckel-Enée , Subash Chand Verma , Marjolene Straube et al.
Cell Metabolism, 2018, 28 (4), pp.557 - 572.e6. ⟨10.1016/j.cmet.2018.06.012⟩
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Clinical and multi-omics cross-phenotyping of patients with autoimmune and autoinflammatory diseases: the observational TRANSIMMUNOM protocol

Roberta Lorenzon , Encarnita Mariotti-Ferrandiz , Caroline Aheng , Claire Ribet , Férial Toumi et al.
BMJ Open, 2018, 8 (8), pp.e021037. ⟨10.1136/bmjopen-2017-021037⟩
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Inhibitory Effect of Ursodeoxycholic Acid on Clostridium difficile Germination Is Insufficient to Prevent Colitis: A Study in Hamsters and Humans

Lola-Jade Palmieri , Dominique Rainteau , Harry Sokol , Laurent Beaugerie , Marie Dior et al.
Frontiers in Microbiology, 2018, 9, pp.2849. ⟨10.3389/fmicb.2018.02849⟩
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Inter-kingdom effect on epithelial cells of the N-Acyl homoserine lactone 3-oxo-C12:2, a major quorum-sensing molecule from gut microbiota

Cecilia Landman , Jean-Pierre Grill , Jean-Maurice Mallet , Philippe Marteau , Lydie Humbert et al.
PLoS ONE, 2018, 13 (8), pp.e0202587. ⟨10.1371/journal.pone.0202587⟩
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Bilophila wadsworthia aggravates high fat diet induced metabolic dysfunctions in mice

Jane Natividad , Bruno Lamas , Hang Phuong Pham , Marie-Laure Michel , Dominique Rainteau et al.
Nature Communications, 2018, 9 (1), pp.2802. ⟨10.1038/s41467-018-05249-7⟩
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Gut Microbiota Regulation of Tryptophan Metabolism in Health and Disease

Allison Agus , Julien Planchais , Harry Sokol
Cell Host & Microbe, 2018, 23 (6), pp.716-724. ⟨10.1016/j.chom.2018.05.003⟩
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Mucosa-associated microbiota dysbiosis in colitis associated cancer

Mathias Lavie-Richard , Giuseppina Liguori , Bruno Lamas , Giovanni Brandi , Grégory da Costa et al.
Gut microbes, 2018, 9 (2), pp.131 - 142. ⟨10.1080/19490976.2017.1379637⟩
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Nucleotide-binding domain leucine-rich repeat containing proteins and intestinal microbiota: pivotal players in colitis and colitis-associated cancer development

Anna Prossomariti , Harry Sokol , Luigi Ricciardiello
Frontiers in Immunology, 2018, 9, pp.1-7. ⟨10.3389/fimmu.2018.01039⟩
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Phages infecting Faecalibacterium prausnitzii belong to novel viral genera that help to decipher intestinal viromes

Jeffrey K. Cornuault , Marie-Agnès Petit , Mahendra Mariadassou , Leandro Benevides , Elisabeth Moncaut et al.
Microbiome, 2018, 6 (1), 14 p. ⟨10.1186/s40168-018-0452-1⟩
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Beyond metagenomics, metatranscriptomics illuminates microbiome functionality in IBD

Aonghus Lavelle , Harry Sokol
Nature reviews. Gastroenterology & hepatology, 2018, 15 (4), pp.193-194. ⟨10.1038/nrgastro.2018.15⟩
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Expression of CCR6 and CXCR6 by Gut-Derived CD4+/CD8α+ T-Regulatory Cells, Which Are Decreased in Blood Samples From Patients With Inflammatory Bowel Diseases

Emmanuelle Godefroy , Joudy Alameddine , Emmanuel Montassier , Justine Mathé , Juliette Desfrançois-Noël et al.
Gastroenterology, 2018, 155 (4), pp.1205-1217. ⟨10.1053/j.gastro.2018.06.078⟩
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The microbiota: an underestimated actor in radiation-induced lesions?

Harry Sokol , Timon Erik Adolph
Gut, 2018, 67 (1), pp.1-2. ⟨10.1136/gutjnl-2017-314279⟩
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Differences in epidemiological features between ulcerative colitis and Crohn’s disease: The early life-programmed versus late dysbiosis hypothesis

Laurent Beaugerie , Ebbe Langholz , Nynne Nyboe-Andersen , Bénédicte Pigneur , Harry Sokol
Medical Hypotheses, 2018, 115, pp.19-21. ⟨10.1016/j.mehy.2018.03.009⟩
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Genetic deficiency of Indoleamine 2,3-dioxygenase promotes gut microbiota-mediated metabolic health

Ludivine Laurans , Nicolas Venteclef , Yacine Haddad , Mouna Chajadine , Fawaz Alzaid et al.
Nature Medicine, 2018, 24 (8), pp.1113-1120. ⟨10.1038/s41591-018-0060-4⟩
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Clinical and multi-omics cross-phenotyping of patients with autoimmune and autoinflammatory diseases: the observational TRANSIMMUNOM protocol

Roberta Lorenzon , Encarnita Mariotti-Ferrandiz , Caroline Aheng , Claire Ribet , Ferial Toumi et al.
BMJ Open, 2018, 8 (8), pp.e021037. ⟨10.1136/bmjopen-2017-021037⟩
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European consensus conference on faecal microbiota transplantation in clinical practice

Giovanni Cammarota , Gianluca Ianiro , Herbert Tilg , Mirjana Rajilić-Stojanović , Patrizia Kump et al.
Gut, 2017, 66 (4), pp.569-580. ⟨10.1136/gutjnl-2016-313017⟩
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Card9 mediates susceptibility to intestinal pathogens through microbiota modulation and control of bacterial virulence

Bruno Lamas , Marie-Laure Michel , Nadine Waldschmitt , Hang-Phuong Pham , Vassiliki Zacharioudaki et al.
Gut, 2017, 67 (10), pp.314195. ⟨10.1136/gutjnl-2017-314195⟩
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New Insights into the Diversity of the Genus Faecalibacterium

Leandro Benevides , Sriti Burman , Rebeca Martin , Véronique Robert , Muriel Thomas et al.
Frontiers in Microbiology, 2017, 8, ⟨10.3389/fmicb.2017.01790⟩
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New Insights into the Diversity of the Genus Faecalibacterium

Leandro Benevides , Sriti Burman , Rebeca Martin , Véronique Robert , Muriel Thomas et al.
Frontiers in Microbiology, 2017, 8, pp.1790. ⟨10.3389/fmicb.2017.01790⟩
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Microbiota in digestive cancers: our new partner?

Anthony Lopez , Franck Hansmannel , Tunay Kokten , Jean-Pierre Bronowicki , Hassan Melhem et al.
Carcinogenesis, 2017, 38 (12), pp.1157-1166. ⟨10.1093/carcin/bgx087⟩
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Clostridium difficile infection in acute flares of inflammatory bowel disease: A prospective study

Harry Sokol , Valérie Lalande , Cecilia Landman , Anne Bourrier , Isabelle Nion-Larmurier et al.
Digestive and Liver Disease, 2017, 49 (6), pp.643-646. ⟨10.1016/j.dld.2017.01.162⟩
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Experimental colitis delays and reduces the severity of collagen-induced arthritis in mice

Julie Hablot , Laurent Peyrin-Biroulet , Tunay Kokten , Reine El Omar , Patrick Netter et al.
PLoS ONE, 2017, 12 (9), pp.e0184624. ⟨10.1371/journal.pone.0184624⟩
Article dans une revue hal-01618133 v1

Caspase recruitment domain 9, microbiota, and tryptophan metabolism : dangerous liaisons in inflammatory bowel diseases

Bruno Lamas , Mathias Richard , Harry Sokol
Current Opinion in Clinical Nutrition and Metabolic Care, 2017, 20 (4), pp. 243-247. ⟨10.1097/MCO.0000000000000382⟩
Article dans une revue (article de synthèse) hal-03791386 v1

Faecal microbiota study reveals specific dysbiosis in spondyloarthritis

Maxime Breban , Julien Tap , Ariane Leboime , Roula Said-Nahal , Philippe Langella et al.
Annals of the Rheumatic Diseases, 2017, 76 (9), pp.1614-1622. ⟨10.1136/annrheumdis-2016-211064⟩
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Specificities of the intestinal microbiota in patients with inflammatory bowel disease and Clostridium difficile infection

Harry Sokol , Sarah Jegou , Claire Mcquitty , Marjolene Straub , Valentin Leducq et al.
Gut microbes, 2017, 9 (1), pp.1-6. ⟨10.1080/19490976.2017.1361092⟩
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Probiotic Strain Lactobacillus casei BL23 Prevents Colitis-Associated Colorectal Cancer

Elsa Jacouton , Florian Chain , Harry Sokol , Philippe Langella , Luis G. Bermudez-Humaran
Frontiers in Immunology, 2017, 8, pp.1553. ⟨10.3389/fimmu.2017.01553⟩
Article dans une revue hal-01654633 v1

Using murine colitis models to analyze probiotics–host interactions

Rebeca Martin Rosique , Florian Chain , Sylvie Miquel , Jean-Paul Motta , Nathalie Vergnolle et al.
FEMS Microbiology Reviews, 2017, 41 (Supp_1), pp.S49-S70. ⟨10.1093/femsre/fux035⟩
Article dans une revue (article de synthèse) hal-01602302 v1

Le microbiote, un nouveau facteur de risque cardiovasculaire ?

Caroline Chong-Nguyen , Henri Duboc , Harry Sokol
La Presse Médicale, 2017, 46 (7-8), pp.708-713. ⟨10.1016/j.lpm.2017.06.005⟩
Article dans une revue hal-03998776 v1
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Functional characterization of novel <em>Faecalibacterium prausnitzii</em> strains isolated from healthy volunteers: a step forward in the use of <em>F. prausnitzii</em> as a next-generation probiotic

Rebeca Martín , Sylvie S. Miquel , Leandro Benevides , Chantal Bridonneau , Véronique Robert et al.
Frontiers in Microbiology, 2017, 8, ⟨10.3389/fmicb.2017.01226⟩
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A microbial signature for Crohn's disease

Victoria Pascal , Marta Pozuelo , Natalia Borruel , Francesc Casellas , David Campos et al.
Gut, 2017, 66 (5), pp.813-822. ⟨10.1136/gutjnl-2016-313235⟩
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Caspase recruitment domain 9, microbiota, and tryptophan metabolism: dangerous liaisons in inflammatory bowel diseases

Bruno Lamas , Mathias L. Richard , Harry Sokol
Current Opinion in Clinical Nutrition and Metabolic Care, 2017, 20 (4), pp.243-247. ⟨10.1097/MCO.0000000000000382⟩
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Chronic Granulomatous Disease in Patients Reaching Adulthood: A Nationwide Study in France

Bertrand Dunogué , Benoit Pilmis , Nizar Mahlaoui , Caroline Elie , Hélène Coignard-Biehler et al.
Clinical Infectious Diseases, 2017, 64 (6), pp.767-775. ⟨10.1093/cid/ciw837⟩
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Faecal microbiota study reveals specific dysbiosis in spondyloarthritis

Maxime Breban , Julien Tap , Ariane Leboime , Roula Said-Nahal , Philippe Langella et al.
Annals of the Rheumatic Diseases, 2017, 76 (9), pp.1614-1622. ⟨10.1136/annrheumdis-2016-211064⟩
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Enterococcus hirae and Barnesiella intestinihominis Facilitate Cyclophosphamide-Induced Therapeutic Immunomodulatory Effects

Romain Daillère , Marie Vétizou , Nadine Waldschmitt , Takahiro Yamazaki , Christophe Isnard et al.
Immunity, 2016, 45 (4), pp.931 - 943. ⟨10.1016/j.immuni.2016.09.009⟩
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Fungal microbiota dysbiosis in IBD.

Harry Sokol , Valentin Leducq , Hugues Aschard , Hang-Phuong Pham , Sarah Jegou et al.
Gut, 2016, 66 (6), pp.1039-1048. ⟨10.1136/gutjnl-2015-310746⟩
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Faecalibacterium prausnitzii A2-165 has a high capacity to induce IL-10 in human and murine dendritic cells and modulates T cell responses

Oriana Rossi , Lisette A. van Berkel , Florian Chain , M. Tanweer Khan , Nico Taverne et al.
Scientific Reports, 2016, 6 (4), pp.18507. ⟨10.1038/srep18507⟩
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Bifidobacterium animalis ssp. lactis CNCM-I2494 Restores Gut Barrier Permeability in Chronically Low-Grade Inflamed Mice

Rebeca Martín , Laure Laval , Florian Chain , Sylvie Miquel , Jane Natividad et al.
Frontiers in Microbiology, 2016, 7, pp.608. ⟨10.3389/fmicb.2016.00608⟩
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CARD9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands.

Bruno Lamas , Mathias L Richard , Valentin Leducq , Hang-Phuong Pham , Marie-Laure Michel et al.
Nature Medicine, 2016, 22 (6), pp.598-605. ⟨10.1038/nm.4102⟩
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Identification of novel anti-inflammatory probiotic strains isolated from pulque

Edgar Torres-Maravilla , Marion Lenoir , Lino Mayorga-Reyes , Thibault Allain , Harry Sokol et al.
Applied Microbiology and Biotechnology, 2016, 100 (1), pp.385-396. ⟨10.1007/s00253-015-7049-4⟩
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Impact on Life Expectancy of Withdrawing Thiopurines in Patients with Crohn’s Disease in Sustained Clinical Remission: A Lifetime Risk-Benefit Analysis

Julien Kirchgesner , Laurent Beaugerie , Fabrice Carrat , Harry Sokol , Jacques Cosnes et al.
PLoS ONE, 2016, 11 (6), pp.e0157191. ⟨10.1371/journal.pone.0157191⟩
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Decreased tryptophan and increased kynurenine levels in mastocytosis associated with digestive symptoms.

Sophie Georgin-Lavialle , Jean-Marie Launay , Francine Côté , Erinn Soucié , Angèle Soria et al.
Allergy, 2016, 71 (3), pp.416-420. ⟨10.1111/all.12802⟩
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Fecal microbiota transplantation in inflammatory bowel disease: the quest for the holy grail

B Pigneur , Harry Sokol
Mucosal Immunology, 2016, 9 (6), pp.1360-1365. ⟨10.1038/mi.2016.67⟩
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CARD9 et colite : un pont entre dysbiose et immunité

Bruno Lamas , Mathias L Richard , Harry Sokol
Médecine/Sciences, 2016, ⟨10.1051/medsci/20163211007⟩
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Effectiveness and Safety of Vedolizumab Induction Therapy for Patients with Inflammatory Bowel Disease

Aurelien Amiot , Jean-Charles Grimaud , Laurent Peyrin-Biroulet , Jérome Filippi , Benjamin Pariente et al.
Clinical Gastroenterology and Hepatology, 2016, 14 (11), pp.1593-1601.e2. ⟨10.1016/j.cgh.2016.02.016⟩
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Microorganisms linked to inflammatory bowel disease-associated dysbiosis differentially impact host physiology in gnotobiotic mice

Thomas W Hoffmann , Hang-Phuong Pham , Chantal Bridonneau , Camille Aubry , Bruno Lamas et al.
The International Society of Microbiologial Ecology Journal, 2016, 10 (2), pp.460-477. ⟨10.1038/ismej.2015.127⟩
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Faecal microbiota transplantation in recurrent Clostridium difficile infection: Recommendations from the French Group of Faecal microbiota Transplantation

Harry Sokol , Tatiana Galperine , Nathalie Kapel , Pierre Bourlioux , Philippe Seksik et al.
Digestive and Liver Disease, 2016, 48 (3), pp.242-247. ⟨10.1016/j.dld.2015.08.017⟩
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Mature CD8 + T-cell clonal expansion in the oral cavity and digestive tract: a severe lymphoid malignancy that mimics Crohn's disease

Paul Coppo , Bettina Fabiani , Christophe Marzac , Harry Sokol
Clinical Case Reports, 2016, ⟨10.1002/ccr3.668⟩
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Indoleamine 2,3-Dioxygenase Fine-Tunes Immune Homeostasis in Atherosclerosis and Colitis through Repression of Interleukin-10 Production

Sarvenaz Metghalchi , Padmapriya Ponnuswamy , Tabassome Simon , Yacine Haddad , Ludivine Laurans et al.
Cell Metabolism, 2015, 22 (3), pp.460-471. ⟨10.1016/j.cmet.2015.07.004⟩
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Fungal Dysbiosis in Mucosa-associated Microbiota of Crohn’s Disease Patients

Giuseppina Liguori , Bruno Lamas , Mathias L. Richard , Giovanni Brandi , Gregory da Costa et al.
Journal of Crohn's and Colitis, 2015, 10 (3), pp.296-305. ⟨10.1093/ecco-jcc/jjv209⟩
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Identification of Metabolic Signatures Linked to Anti-Inflammatory Effects of Faecalibacterium prausnitzii

Sylvie Miquel , Marion Leclerc , Rebeca Martin , Florian Chain , Marion Lenoir et al.
mBio, 2015, 6 (2), pp.e00300-15. ⟨10.1128/mBio.00300-15⟩
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Faecalibacterium prausnitzii prevents physiological damages in a chronic low-grade inflammation murine model

Rebeca Martin , Sylvie Miquel , Florian Chain , Jane M. Natividad , Jennifer Jury et al.
BMC Microbiology, 2015, 15, pp.67. ⟨10.1186/s12866-015-0400-1⟩
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Targeting the Microbiome in Inflammatory Bowel Disease: Critical Evaluation of Current Concepts and Moving to New Horizons.

Mohamed Bejaoui , Harry Sokol , Philippe Marteau
Digestive Diseases, 2015, 33 (Suppl 1), pp.105-112. ⟨10.1159/000437104⟩
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Changes in the Lemann Index values during the First Years of Crohn's Disease.

Cyrielle Gilletta , Maïté Lewin , Anne Bourrier , Isabelle Nion-Larmurier , Sylvie Rajca et al.
Clinical Gastroenterology and Hepatology, 2015, 13 (9), pp.1633-1640.e3. ⟨10.1016/j.cgh.2015.02.041⟩
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CD4CD8aa Lymphocytes, A Novel Human Regulatory T Cell Subset Induced by Colonic Bacteria and Deficient in Patients with Inflammatory Bowel Disease

Guillaume Sarrabayrouse , Céline Bossard , Joe-Marc Chauvin , Anne Jarry , Guillaume Meurette et al.
PLoS Biology, 2014, 12 (4), pp.e1001833. ⟨10.1371/journal.pbio.1001833⟩
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Impact of probiotics on risk factors for cardiovascular diseases. A review.

Bruno Ebel , Guillaume Lemetais , Laurent Beney , Rémy Cachon , Harry Sokol et al.
Critical Reviews in Food Science and Nutrition, 2014, 54 ((2)), pp.175-89. ⟨10.1080/10408398.2011.579361⟩
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Ecology and metabolism of the beneficial intestinal commensal bacterium Faecalibacterium prausnitzii

Sylvie Miquel , Rebeca Martin , Chantal Bridonneau , Véronique Robert , Harry Sokol et al.
Gut microbes, 2014, 5 (2), pp.146-151. ⟨10.4161/gmic.27651⟩
Article dans une revue (article de synthèse) hal-00961711 v1

Prevalence and risk factors of Clostridium difficile infection in patients hospitalized for flare of inflammatory bowel disease: A retrospective assessment.

Helene Regnault , Anne Bourrier , Valerie Lalande , Isabelle Nion-Larmurier , Harry Sokol et al.
Digestive and Liver Disease, 2014, 46 (12), pp.1086-1092. ⟨10.1016/j.dld.2014.09.003⟩
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Unrelated Cord Blood Transplantation for Patients with Primary or Secondary Myelofibrosis

Sarvenaz Metghalchi , Padmapriya Ponnuswamy , Tabassome Simon , Yacine Haddad , Ludivine Laurans et al.
Biology of Blood and Marrow Transplantation, 2014, 20 (11), pp.1841-1846. ⟨10.1016/j.bbmt.2014.06.011⟩
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Gut Fungal Microbiota: The Yin and Yang of Inflammatory Bowel Disease.

Mathias L Richard , Bruno Lamas , Giuseppina Liguori , Thomas W Hoffmann , Harry Sokol
Inflammatory Bowel Diseases, 2014, 21 (3), pp.656-665. ⟨10.1097/MIB.0000000000000261⟩
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Bacterial protein signals are associated with Crohn's disease.

Catherine Juste , David P Kreil , Christian Beauvallet , Alain Guillot , Sebastian Vaca et al.
Gut, 2014, 63 (10), pp.1566-1577. ⟨10.1136/gutjnl-2012-303786⟩
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Faecalibacterium prausnitzii provides host beneficial metabolic profile during inflammation

Sylvie S. Miquel , Marion Leclerc , Rebeca Martín , Sylvie Hudault , Chantal Bridonneau et al.
Gastroenterology, 2014, 146 (5), pp.S-832. ⟨10.1016/S0016-5085(14)63022-5⟩
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Effects in the use of a genetically engineered strain of Lactococcus lactis delivering in situ IL-10 as a therapy to treat low-grade colon inflammation.

Rebeca Martín , Florian Chain , Sylvie Miquel , Jane M Natividad , Harry Sokol et al.
Human Vaccines & Immunotherapeutics, 2014, 10 (6), pp.1611-1621. ⟨10.4161/hv.28549⟩
Article dans une revue hal-00979468 v1

Factors Associated with Durable Response to Infliximab in Crohn's Disease 5 Years and Beyond: A Multicenter International Cohort.

Pascal Juillerat , Harry Sokol , Florian Froehlich , Vijay Yajnik , Laurent Beaugerie et al.
Inflammatory Bowel Diseases, 2014, 21 (1), pp.60-70. ⟨10.1097/MIB.0000000000000225⟩
Article dans une revue hal-01097180 v1

Immunochip SNP array identifies novel genetic variants conferring susceptibility to candidaemia.

Vinod Kumar , Shih-Chin Cheng , Melissa D Johnson , Sanne P Smeekens , Agnieszka Wojtowicz et al.
Nature Communications, 2014, 5, pp.4675. ⟨10.1038/ncomms5675⟩
Article dans une revue hal-01064610 v1

Faecalibacterium prausnitzii prevents irritable bowel syndrome-like symptoms in both murine low grade chronic inflammation and acute stress models

Rebeca Martin Rosique , Sylvie S. Miquel , Florian Chain , Jane Mea Natividad , Marion Gillet et al.
Gastroenterology, 2014, 146 (5), pp.S-840-S-841. ⟨10.1016/S0016-5085(14)63054-7⟩
Article dans une revue hal-02629578 v1

Alterations in the Intestinal Microbiome (Dysbiosis) as a Predictor of Relapse After Infliximab Withdrawal in Crohn's Disease.

Sylvie Rajca , Virginie Grondin , Edouard Louis , Gwenola Vernier-Massouille , Jean-Charle Grimaud et al.
Inflammatory Bowel Diseases, 2014, 20 (6), pp.978-986. ⟨10.1097/MIB.0000000000000036⟩
Article dans une revue hal-00986861 v1

An Image-Based Genetic Assay Identifies Genes in T1D Susceptibility Loci Controlling Cellular Antiviral Immunity in Mouse.

Juan Liao , Humberto B Jijon , Ira R Kim , Gautam Goel , Aivi Doan et al.
PLoS ONE, 2014, 9 (9), pp.e108777. ⟨10.1371/journal.pone.0108777⟩
Article dans une revue hal-01070301 v1

Beneficial Effects of Exclusive Enteral Nutrition in Crohn's Disease Are not Mediated by Faecalibacterium prausnitzii.

Harry Sokol , Philippe Langella
Inflammatory Bowel Diseases, 2014, 20 (7), pp.E18. ⟨10.1097/MIB.0000000000000071⟩
Article dans une revue hal-00996838 v1

The Commensal Bacterium Faecalibacterium prausnitzii Is Protective in DNBS-induced Chronic Moderate and Severe Colitis Models.

Rebeca Martín , Florian Chain , Sylvie Miquel , Jun Lu , Jean-Jacques Gratadoux et al.
Inflammatory Bowel Diseases, 2014, 20 (3), pp.417-430. ⟨10.1097/01.MIB.0000440815.76627.64⟩
Article dans une revue hal-00931932 v1

Complications and surgery in the inflammatory bowel diseases biological era.

Harry Sokol , Philippe Seksik , Jacques Cosnes
Current Opinion in Gastroenterology, 2014, 30 (4), pp.378-384. ⟨10.1097/MOG.0000000000000078⟩
Article dans une revue hal-00994174 v1

Risk of new or recurrent cancer under immunosuppressive therapy in patients with IBD and previous cancer.

Laurent Beaugerie , Fabrice Carrat , Jean-Frédéric Colombel , Anne-Marie Bouvier , Harry Sokol et al.
Gut, 2013, 63, pp.1416-1423. ⟨10.1136/gutjnl-2013-305763⟩
Article dans une revue hal-00877944 v1

Decreased Lymphatic Vessel Density Is Associated With Postoperative Endoscopic Recurrence in Crohn's Disease.

Jean-François Rahier , Laurent Dubuquoy , Jean-Frédéric Colombel , Anne Jouret-Mourin , Monique Delos et al.
Inflammatory Bowel Diseases, 2013, 19 (10), pp.2084-2090. ⟨10.1097/MIB.0b013e3182971cec⟩
Article dans une revue hal-00844831 v1

Crohn's disease of the vulva.

Maximilien Barret , Vincent de Parades , Maxime Battistella , Harry Sokol , Nicolas Lemarchand et al.
Journal of Crohn's and Colitis, 2013, 10, pp.563-570. ⟨10.1016/j.crohns.2013.10.009⟩
Article dans une revue hal-00907293 v1

[A colourful villous atrophy].

Jérémy Augustin , Nadia Hoyeau , Harry Sokol , Jean-François Fléjou , Magali Svrcek
Annales de Pathologie, 2013, 33 ((6)), pp.418-20. ⟨10.1016/j.annpat.2013.10.019⟩
Article dans une revue hal-00920711 v1

Gastrointestinal manifestations in mastocytosis: A study of 83 patients.

Harry Sokol , Sophie Georgin-Lavialle , Danielle Canioni , Stéphane Barete , Gandhi Damaj et al.
Journal of Allergy and Clinical Immunology, 2013, 132 (4), pp.866-873.e3. ⟨10.1016/j.jaci.2013.05.026⟩
Article dans une revue istex hal-00849794 v1

Card9 Mediates Intestinal Epithelial Cell Restitution, T-helper 17 Responses, and Control of Bacterial Infection in Mice.

Harry Sokol , Kara L Conway , Mei Zhang , Myunghwan Choi , Bret Morin et al.
Gastroenterology, 2013, 145 (3), pp.591-601.e3. ⟨10.1053/j.gastro.2013.05.047⟩
Article dans une revue hal-00830742 v1

Extra-intestinal malignancies in inflammatory bowel disease: Results of the 3rd ECCO Pathogenesis Scientific Workshop (III).

Fernando Magro , Laurent Peyrin-Biroulet , Harry Sokol , Xavier Aldeger , Antonia Costa et al.
Journal of Crohn's and Colitis, 2013, 4, pp.31-44 ⟨10.1016/j.crohns.2013.04.006⟩
Article dans une revue hal-00829286 v1

Efficacy and safety of thalidomide in patients with inflammatory manifestations of chronic granulomatous disease: A retrospective case series.

Nicolas Noel , Nizar Mahlaoui , Stéphane Blanche , Felipe Suarez , Hélène Coignard-Biehler et al.
Journal of Allergy and Clinical Immunology, 2013, 132 (4), pp.997-1000.e4. ⟨10.1016/j.jaci.2013.04.059⟩
Article dans une revue istex hal-00838579 v1

Excess primary intestinal lymphoproliferative disorders in patients with inflammatory bowel disease.

Harry Sokol , Laurent Beaugerie , Marc Maynadié , David Laharie , Jean-Louis Dupas et al.
Inflammatory Bowel Diseases, 2012, 18 (11), pp.2063-2071. ⟨10.1002/ibd.22889⟩
Article dans une revue hal-00683356 v1

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment.

Xochitl C Morgan , Timothy L Tickle , Harry Sokol , Dirk Gevers , Kathryn L Devaney et al.
Genome Biology, 2012, 13 ((9)), pp.R79. ⟨10.1186/gb-2012-13-9-r79⟩
Article dans une revue hal-00736429 v1

Colorectal neoplasia in PSC-IBD patients: are times changing?

Harry Sokol , Olivier Chazouilleres
Liver International, 2012, 32 ((2)), pp.175-6. ⟨10.1111/j.1478-3231.2011.02671.x⟩
Article dans une revue istex hal-00683351 v1

Connecting dysbiosis, bile-acid dysmetabolism and gut inflammation in inflammatory bowel diseases.

Henri Duboc , Sylvie Rajca , Dominique Rainteau , David Benarous , Marie-Anne Maubert et al.
Gut, 2012, 62 (4), pp.531-539. ⟨10.1136/gutjnl-2012-302578⟩
Article dans une revue istex hal-00734237 v1

Factors affecting outcomes in Crohn's disease over 15 years.

Jacques Cosnes , Anne Bourrier , Isabelle Nion-Larmurier , Harry Sokol , Laurent Beaugerie et al.
Gut, 2012, 61, pp.1140-1145. ⟨10.1136/gutjnl-2011-301971⟩
Article dans une revue hal-00692463 v1

Anti-inflammatory properties of dairy lactobacilli

Clarissa Santos Rocha , Omar Lakhdari , Hervé Blottière , Sébastien Blugeon , Harry Sokol et al.
Inflammatory Bowel Diseases, 2012, 18 (4), pp.657-666. ⟨10.1002/ibd.21834⟩
Article dans une revue hal-03372099 v1

Diarrhées infectieuses aiguës de l’adulte : épidémiologie et prise en charge

Laurent Beaugerie , Harry Sokol
La Presse Médicale, 2012, 42 (1), pp.52-59. ⟨10.1016/j.lpm.2012.09.014⟩
Article dans une revue istex hal-00770538 v1

Long-Term Outcome of Patients with Crohn's Disease that Responds to Azathioprine.

Marine Camus , Philippe Seksik , Anne Bourrier , Isabelle Nion-Larmurier , Harry Sokol et al.
Clinical Gastroenterology and Hepatology, 2012, 11 (4), pp.389-394. ⟨10.1016/j.cgh.2012.10.038⟩
Article dans une revue hal-00751270 v1

Clinical, serological and genetic predictors of inflammatory bowel disease course.

Laurent Beaugerie , Harry Sokol
World Journal of Gastroenterology, 2012, 18 ((29)), pp.3806-13. ⟨10.3748/wjg.v18.i29.3806⟩
Article dans une revue hal-00724458 v1

Crosstalk between the hepatologist and the cardiologist: a future place for the lithocholic acid as a coronary atheroma risk factor?

Henri Duboc , Hélène Aelion , Dominique Rainteau , Sylvie Rajca , Harry Sokol et al.
Hepatology, 2012, 56, pp.2426 ⟨10.1002/hep.25839⟩
Article dans une revue istex hal-00703170 v1

p40phox Expression Regulates Neutrophil Recruitment and Function during the Resolution Phase of Intestinal Inflammation.

Kara L Conway , Gautam Goel , Harry Sokol , Monika Manocha , Emiko Mizoguchi et al.
Journal of Immunology, 2012, 189 (7), pp.3631-3640 ⟨10.4049/jimmunol.1103746⟩
Article dans une revue hal-00725137 v1

Anti-inflammatory properties of dairy lactobacilli.

Clarissa Santos Rocha , Omar Lakhdari , Hervé M Blottière , Sébastien Blugeon , Harry Sokol et al.
Inflammatory Bowel Diseases, 2011, 18 (4), pp.657-666. ⟨10.1002/ibd.21834⟩
Article dans une revue hal-00632487 v1

Current smoking differentially affects blood mononuclear cells from patients with crohn's disease and ulcerative colitis: Relevance to its adverse role in the disease.

Vivianne Bergeron , Virginie Grondin , Sylvie Rajca , Marie-Anne Maubert , Benedicte Pigneur et al.
Inflammatory Bowel Diseases, 2011, 18 (6), pp.1101-1111. ⟨10.1002/ibd.21889⟩
Article dans une revue hal-00692470 v1

Air mass pushing the liver.

Maximilien Barret , Romain Coriat , Laurent Beaugerie , Harry Sokol
Digestive and Liver Disease, 2011, 43 (12), pp.1025. ⟨10.1016/j.dld.2011.06.005⟩
Article dans une revue istex hal-00631455 v1

Sera from patients with Crohn's disease break bacterial lipopolysaccharide tolerance of human intestinal epithelial cells via MD-2 activity.

Philippe Seksik , Harry Sokol , Virginie Grondin , Christophe Adrie , Henri Duboc et al.
Innate Immunity, 2010, 16 (6), pp.381-90. ⟨10.1177/1753425909357076⟩
Article dans une revue hal-00597665 v1

Current smoking, not duration of remission, delays Crohn's disease relapse following azathioprine withdrawal.

Harry Sokol , Philippe Seksik , Isabelle Nion-Larmurier , Ariane Vienne , Laurent Beaugerie et al.
Inflammatory Bowel Diseases, 2010, 16 (3), pp.362-3. ⟨10.1002/ibd.20981⟩
Article dans une revue hal-00599106 v1

Crypt abscess-associated microbiota in inflammatory bowel disease and acute self-limited colitis.

Harry Sokol , Nadia Vasquez , Nadia Hoyeau-Idrissi , Philippe Seksik , Laurent Beaugerie et al.
World Journal of Gastroenterology, 2010, 16 (5), pp.583-7
Article dans une revue hal-00599129 v1

Usefulness of co-treatment with immunomodulators in patients with inflammatory bowel disease treated with scheduled infliximab maintenance therapy.

Harry Sokol , Philippe Seksik , Fabrice Carrat , Isabelle Nion-Larmurier , Ariane Vienne et al.
Gut, 2010, 59 (10), pp.1363-8. ⟨10.1136/gut.2010.212712⟩
Article dans une revue istex hal-00599098 v1

Risk factors for neoplasia in inflammatory bowel disease patients with pancolitis.

Vivianne Bergeron , Ariane Vienne , Harry Sokol , Philippe Seksik , Isabelle Nion-Larmurier et al.
The American Journal of Gastroenterology, 2010, 105 (11), pp.2405-11. ⟨10.1038/ajg.2010.248⟩
Article dans une revue hal-00601826 v1

Gastrointestinal involvement and manifestations in systemic mastocytosis.

Harry Sokol , Sophie Georgin-Lavialle , Catherine Grandpeix-Guyodo , Danielle Canioni , Stéphane Barete et al.
Inflammatory Bowel Diseases, 2010, 16 (7), pp.1247-53. ⟨10.1002/ibd.21218⟩
Article dans une revue hal-00599073 v1

Intragastric administration of a superoxide dismutase-producing recombinant Lactobacillus casei BL23 strain attenuates DSS colitis in mice.

Laurie Watterlot , Tatiana Rochat , Harry Sokol , Claire Cherbuy , Ismael Bouloufa et al.
International Journal of Food Microbiology, 2010, 144 (1), pp.35-41. ⟨10.1016/j.ijfoodmicro.2010.03.037⟩
Article dans une revue istex hal-00600679 v1

Appendicitis, not appendectomy, is protective against ulcerative colitis, both in the general population and first-degree relatives of patients with IBD.

Laurent Beaugerie , Harry Sokol
Inflammatory Bowel Diseases, 2010, 16 (2), pp.356-7. ⟨10.1002/ibd.21064⟩
Article dans une revue hal-00593133 v1

Body mass index and disease activity at treatment initiation: potential new predictors of response to azathioprine therapy in IBD.

Harry Sokol , Laurent Beaugerie
Inflammatory Bowel Diseases, 2010, 16 (4), pp.714-5. ⟨10.1002/ibd.21102⟩
Article dans une revue hal-00598822 v1

Acute cryptosporidiosis as a cause of sudden recurrence of digestive symptoms in patients with Crohn's disease.

Orianne Colussi , Alexandre Rouen , Philippe Seksik , Jacques Cosnes , Laurent Beaugerie et al.
Journal of Crohn's and Colitis, 2010, 4 (6), pp.669-70. ⟨10.1016/j.crohns.2010.05.008⟩
Article dans une revue istex hal-00593556 v1

The intestinal microbiota in inflammatory bowel diseases: time to connect with the host.

Harry Sokol , Philippe Seksik
Current Opinion in Gastroenterology, 2010, 26 (4), pp.327-31. ⟨10.1097/MOG.0b013e328339536b⟩
Article dans une revue hal-00599080 v1

[Acute diarrhea in the adult].

Harry Sokol , Laurent Beaugerie
Revue du Praticien (La), 2010, 60 (3), pp.413-8
Article dans une revue hal-00599405 v1

Single immunoglobulin infusion can reverse hemodynamic failure associated with severe Clostridium difficile colitis.

Harry Sokol , Eric Maury , Philippe Seksik , Jacques Cosnes , Laurent Beaugerie
The American Journal of Gastroenterology, 2009, 104 ((10)), pp.2649-50. ⟨10.1038/ajg.2009.355⟩
Article dans une revue hal-00816369 v1

Noncolorectal malignancies in inflammatory bowel disease: more than meets the eye.

Laurent Beaugerie , Harry Sokol , Philippe Seksik
Digestive Diseases, 2009, 27 (3), pp.375-81. ⟨10.1159/000228577⟩
Article dans une revue hal-00657987 v1

Effects of light smoking consumption on the clinical course of Crohn's disease.

Philippe Seksik , Isabelle Nion-Larmurier , Harry Sokol , Laurent Beaugerie , Jacques Cosnes
Inflammatory Bowel Diseases, 2009, 15 (5), pp.734-41. ⟨10.1002/ibd.20828⟩
Article dans une revue hal-00657455 v1

Thalidomide as a treatment for refractory CGD colitis.

Harry Sokol , Felipe Suarez , Tchao Meatchi , Georgia Malamut , Marie-Anne Pocidalo et al.
The American Journal of Gastroenterology, 2009, 104 (4), pp.1069. ⟨10.1038/ajg.2009.56⟩
Article dans une revue hal-00657915 v1

Analysis of bacterial bowel communities of IBD patients: what has it revealed?

Harry Sokol , Christophe Lay , Philippe Seksik , Gerald W Tannock
Inflammatory Bowel Diseases, 2008, 14 (6), pp.858-67. ⟨10.1002/ibd.20392⟩
Article dans une revue hal-00652970 v1
Image document

Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients.

Harry Sokol , Bénédicte Pigneur , Laurie Watterlot , Omar Lakhdari , Luis G Bermúdez-Humarán et al.
Proceedings of the National Academy of Sciences of the United States of America, 2008, 105 (43), pp.16731-6. ⟨10.1073/pnas.0804812105⟩
Article dans une revue hal-00652961 v1

Disease activity and cancer risk in inflammatory bowel disease associated with primary sclerosing cholangitis.

Harry Sokol , Jacques Cosnes , Olivier Chazouilleres , Laurent Beaugerie , Emmanuel Tiret et al.
World Journal of Gastroenterology, 2008, 14 (22), pp.3497-503
Article dans une revue hal-00652955 v1

Is there any place for alimentary probiotics, prebiotics or synbiotics, for patients with inflammatory bowel disease?

Philippe Seksik , Xavier Dray , Harry Sokol , Philippe Marteau
Molecular Nutrition and Food Research, 2008, 52 (8), pp.906-12. ⟨10.1002/mnfr.200700147⟩
Article dans une revue istex hal-00652965 v1

Specificities of the fecal microbiota in inflammatory bowel disease

Harry Sokol , Philippe Seksik , Lionel Rigottier Gois , Christophe Lay , Patricia Lepage et al.
Inflammatory Bowel Diseases, 2006, 12 (2), pp.106-111. ⟨10.1097/01.MIB.0000200323.38139.c6⟩
Article dans une revue hal-02663416 v1
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Temperature gradient gel electrophoresis of fecal 16S rRNA reveals active Escherichia coli in the microbiota of patients with ulcerative colitis

Harry Sokol , Patricia Lepage , P. Seksik , Joël Doré , Philippe Marteau
Journal of Clinical Microbiology, 2006, 44 (9), pp.3172-3177. ⟨10.1128/JCM.02600-05⟩
Article dans une revue hal-02666617 v1

Introduction: Edgar Hull Day, May 11, 1973.

Mathias L Richard , Bruno Lamas , Giuseppina Liguori , Thomas W Hoffmann , Harry Sokol
Southern Medical Journal, 1975, pp.1066-7
Article dans une revue hal-01101182 v1

Distinct tryptophan metabotypes associate with disease activity, treatment escalation and future disease progression in Inflammatory Bowel Disease

D Harris , A Bourgonje , J Hov , S Ibing , L Welz et al.
20th Congress of ECCO Berlin, ECCO - European Crohn's and Colitis Organisation, Feb 2025, Berlin, France. pp.i302-i303 ; DOP121, ⟨10.1093/ecco-jcc/jjae190.0160⟩
Communication dans un congrès hal-05156147 v1

Faecalibacterium prausnitzii induces an anti-inflammatory response and a metabolic reprogramming in human monocytes

N Rolhion , C Danne , L Creusot , R Formiga , F Marquet et al.
20th Congress of ECCO, ECCO - European Crohn's and Colitis Organisation, Feb 2025, Berlin, France. pp.i452-i452 ; P0085, ⟨10.1093/ecco-jcc/jjae190.0259⟩
Communication dans un congrès hal-05167255 v1
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Association entre les Métabolites du Tryptophane et la Présence d'Érosions et de Symptômes dans l'arthrose digitale : Résultats issus de la cohorte DIGICOD

Marie Binvignat , Patrick Emond , Francois Mifsud , Brenda Miao , Alice Courties et al.
Congrès de la Société Française de Rhumatologie, Dec 2022, Paris, France
Communication dans un congrès hal-03995769 v1
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Tryptophan Metabolites Are Associated with Erosion and Symptoms in Hand Osteoarthritis: Results from the DIGICOD Cohort

Marie Binvignat , Patrick Emond , Brenda Miao , Alice Courties , Emmanuel Maheu et al.
American Congress of Rheumatology, Nov 2022, Philadelphia, United States
Communication dans un congrès hal-03995763 v1

Role of adherent and invasive E. coli in Crohn's Disease: Lessons from the postoperative recurrence model

Anthony Buisson , Harry Sokol , Nassim Hammoudi , Stéphane Nancey , Xavier Treton et al.
17. Congress of ECCO, European Crohn’s and Colitis Organisation, Feb 2022, Virtual, Austria
Communication dans un congrès hal-03665870 v1

Tryptophan derivatives effects via the AhR signaling pathway modulation on host disturbances after a Citrobacter rodentium infection

Maeva Meynier , Elodie Baudu , Nicolas Barnich , Denis Ardid , Jean-Marc Chatel et al.
CELL SYMPOSIA, May 2020, PARIS, France
Communication dans un congrès hal-03045712 v1

Fungi participate in the dysbiosis of gut microbiota in patients with primary sclerosing cholangitis

Sara Lemoinne , Astrid Kemgang , Karima Ben Belkacem , Marjolene Straube , Sarah Jegou et al.
International Liver Congress / 54. Annual Meeting of the, European Association for the Study of the Liver (EASL). CHE., Apr 2019, Vienne, Austria. ⟨10.1016/S0618-8278(19)30138-0⟩
Communication dans un congrès hal-02734789 v1

Prophages of Roseburia intestinalis: the enemy from within

Jeffrey K. Cornuault , Elisabeth Moncaut , Marie-Agnès Petit , Harry Sokol , Marianne De Paepe
Virus of Microbes, Wrocław, Jul 2018, Wrocław, Poland
Communication dans un congrès hal-05393362 v1

A c-type lectin triggers immune surveillance by innate lymphoid cells for eradication of attaching-and-effacing bacteria

Bruno Lamas , Nadine Waldschmitt , Sho Kitamoto , Thomas Secher , Vassiliki Zacharioudaki et al.
25. United European Gastroenterology: Week, Oct 2017, Barcelone, Spain
Communication dans un congrès hal-02786603 v1

The presence of adherent-invasive Escherichia coli strains on the surgical specimen is a predictor of severe endoscopic postoperative recurrence in Crohn's disease

N. Barnich , Anthony Buisson , Claire Auzolle , M. Rodrigues , Carmen Stefanescu et al.
12. Congress of ECCO, European Crohn's and Colitis Organisation, Feb 2017, Barcelone, Spain
Communication dans un congrès hal-03553323 v1

Étude du microbiote intestinal et des cellules productrices d'IL-17 chez les souris arthritiques et lipo-atrophiques PPARγ déficientes : un modèle de désordre immunométabolique ?

Julie Hablot , Jean-Yves Jouzeau , Meriem Koufany , Béatrice Desvergne , Gérard Eberl et al.
30ème Congrès Français de Rhumatologie (SFR), Dec 2017, Paris, France. pp.A139 (O.114)
Communication dans un congrès hal-01775264 v1

Card9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands

Bruno Lamas , Mathias Lavie-Richard , Marie-Laure Michel , Valentin Leducq , Chantal Bridonneau et al.
2. Ghent Gut inflammation Group: Intestinal host-microbiota interactions controlling health and disease, May 2017, Ghent, Belgium
Communication dans un congrès hal-02785302 v1

Card9 mediates susceptibility to intestinal pathogens through microbiota modulation and control of bacterial virulence.

Bruno Lamas , Mathias Lavie-Richard , Marie-Laure Michel , Nadine Waldschmitt , Vassiliki Zacharioudaki et al.
25. United European Gastroenterology: Week, Oct 2017, Barcelone, Spain
Communication dans un congrès hal-02786832 v1

Effet délétère d’un prophage sur la stabilité de Roseburia intestinalis

Jeffrey K. Cornuault , Elisabeth Moncaut , Marie-Agnès Petit , Harry Sokol , Marianne De Paepe
Société Française de Microbiologie, Oct 2017, Paris, France
Communication dans un congrès hal-05393337 v1

Susceptibility of Card9-/- mice to intestinal pathogen is partly microbiota dependant.

Bruno Lamas , Nadine Waldschmitt , Marie-Laure Michel , Jane Mea Natividad , Grégory da Costa et al.
Microbiome Science Days, Oct 2016, Berchtesgaden, Germany
Communication dans un congrès hal-02795617 v1

Card9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands

Bruno Lamas , Mathias Lavie-Richard , Marie-Laure Michel , Valentin Leducq , Chantal Bridonneau et al.
24. United European Gastroenterology Week, Oct 2016, Vienne, Austria
Communication dans un congrès hal-02796262 v1

Bifidobacterium Animalis SUBSP Lactis CNCM-I2494 Restores Tight Junction Proteins Levels in a Chronic Low-grade Colonic Inflammation Mouse Model

Rebeca Martin Rosique , Laure Laval , Florian Chain , Sylvie Miquel , Jane Mea Natividad et al.
8. Probiotics, Prebiotics & New Foods for Microbiota and Human Health meeting held, Sep 2015, Rome, Italy. ⟨10.1097/MCG.0000000000000691⟩
Communication dans un congrès hal-01531752 v1

Reciprocal influence of experimental arthritis on colitis: a model to study extraintestinal manifestations of IBD?

Julie Hablot , Tunay Kökten , Jean-Yves Jouzeau , Harry Sokol , Laurent Peyrin-Biroulet et al.
20ème congrès de la Société Française de Pharmacologie et de Thérapeutique (SFP&T), SFP&T, Apr 2016, NANCY, France. pp.75 (PS-123)
Communication dans un congrès hal-03602064 v1

Predictors of post-operative endoscopic recurrence in Crohn's disease: a prospective study of the REMIND group

Matthieu Allez , Carmen Stefanescu , Stéphane Nancey , Anthony Buisson , Pierre Desreumaux et al.
10. Congress of ECCO, European Crohn's and Colitis Organisation, Feb 2015, Barcelone, Spain. ⟨10.1093/ecco-jcc/jju027.076⟩
Communication dans un congrès hal-03553417 v1

L’invalidation de CARD9 induit un microbiote intestinal pro-inflammatoire.

Bruno Lamas , Chantal Bridonneau , Grégory da Costa , Thomas W. Hoffmann , Philippe Langella et al.
Journées Francophones d’Hépato-Gastroentérologie et d’Oncologie Digestive, Mar 2015, Paris, France
Communication dans un congrès hal-02794066 v1

Role of prophages in intestinal microbiota stability

Jeffrey K. Cornuault , Marianne De Paepe , Harry Sokol
Phages.fr : Interactions phages-bactéries : du fondamental à l'appliqué, Nov 2015, Montpellier, France
Communication dans un congrès hal-05393300 v1

Card9 deficiency leads to a proinflammatory gut microbiota

Bruno Lamas , Nicolas Tessandier , Chantal Bridonneau , Grégory da Costa , Thomas W. Hoffmann et al.
22. United European Gastroenterology Week, Oct 2014, Vienne, Austria
Communication dans un congrès hal-02794409 v1
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Role of Dact3 in the intestinal homeostasis: Elucidating the mechanisms of Action of the anti-inflammatory Commensal bacTerium Faecalibacterium duncaniae A2-165

Sarah Khazaal , Claire Cherbuy , Harry Sokol , Philippe Langella , Florian Chain et al.
Microbes 2023 Un monde à explorer, Oct 2023, Rennes, France
Poster de conférence hal-04341735 v1
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Integration of bacterial RNA-Seq & human gut microbiota metaproteomic datasets highlights Faecalibacterium duncaniae A2-165’s import systems

Eugénie Huillet , Philippe Langella , Muriel Thomas , Harry Sokol , Céline Henry et al.
5th International metaproteomics symposium, Apr 2023, Avignon, France
Poster de conférence hal-04321685 v1

Effects of tryptophan derivatives via the AHR/Il22 signaling pathway modulation on host disturbances in post citrobacter rodentium infection model mimicking irritable bowel syndrome

Maeva Meynier , Elodie Baudu , Nicolas Barnich , Denis Ardid , J.M. Chatel et al.
UEGW 2020, Oct 2020, AMSTERDAM, Netherlands
Poster de conférence hal-03046872 v1

Microbiota diversity at time of surgery predict endoscopic recurrence in Crohn's disease: results of a prospective study of the REMIND group

Harry Sokol , L. Brot , C. Stefanescu , C. Auzolle , Nicolas Barnich et al.
Advances in inflammatory bowel diseases, 2017, Vienne, Australia. OXFORD UNIV PRESS, Journal of Crohn's and Colitis, 11, pp.1, 2017, Journal of Crohn's and Colitis
Poster de conférence hal-01600722 v1

Deleterious effect of prophages in intestinal bacteria?

Jeffrey K. Cornuault , Marie-Agnès Petit , Harry Sokol , Marianne De Paepe
Virus of Microbes Liverpool, Jul 2016, Liverpool,, United Kingdom
Poster de conférence hal-05393318 v1

The Microbiota in Inflammatory Bowel Disease

Philippe Marteau , Marion Leclerc , Patricia Lepage , Philippe Seksik , Harry Sokol et al.
Intestinal Microbiota in Health and Disease, CRC Press, 17 p., 2014, 978-1-4822-2677-5 978-1-4822-2676-8
Chapitre d'ouvrage hal-02795586 v1