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CyberSco.Py an open-source software for event-based, conditional microscopy
Lionel Chiron
,
Matthias Le Bec
,
Céline Cordier
,
Sylvain Pouzet
,
Dimitrije Milunov
et al.
Journal articles
hal-03761554v1
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Observing Nutrient Gradients, Gene Expression and Growth Variation Using the "Yeast Machine" Microfluidic Device
Zoran Marinkovic
,
Clément Vulin
,
Mislav Acman
,
Xiaohu Song
,
Jean Di Meglio
et al.
Journal articles
hal-03083179v1
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Rational programming of history-dependent logic in cellular populations
Ana Zúñiga
,
Sarah Guiziou
,
Pauline Mayonove
,
Zachary Ben Meriem
,
Miguel Camacho
et al.
Journal articles
inserm-02952457v1
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The Promise of Optogenetics for Bioproduction: Dynamic Control Strategies and Scale-Up Instruments
Sylvain Pouzet
,
Alvaro Banderas
,
Matthias Le Bec
,
Thomas Lautier
,
Gilles Truan
et al.
Journal articles
hal-03083199v1
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Autonomous and Assisted Control for Synthetic Microbiology
Alvaro Banderas
,
Matthias Le Bec
,
Céline Cordier
,
Pascal Hersen
Journal articles
hal-03083194v1
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Enrichment of persisters enabled by a ß-lactam-induced filamentation method reveals their stochastic single-cell awakening
Etthel Windels
,
Zacchari Ben Meriem
,
Taiyeb Zahir
,
Kevin Verstrepen
,
Pascal Hersen
et al.
Journal articles
hal-03761734v1
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A microfluidic device for inferring metabolic landscapes in yeast monolayer colonies
Zoran Marinkovic
,
Clément Vulin
,
Mislav Acman
,
Xiaohu Song
,
Jean-Marc Di Meglio
et al.
Journal articles
hal-02331190v1
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Hyperosmotic Stress Response Memory is Modulated by Gene Positioning in Yeast
Zacchari Ben Meriem
,
Yasmine Khalil
,
Pascal Hersen
,
Emmanuelle Fabre
Journal articles
hal-02331194v1
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Identification of individual cells from z-stacks of bright-field microscopy images
Jean-Baptiste Lugagne
,
Srajan Jain
,
Pierre Ivanovitch
,
Zacchary Ben Meriem
,
Clément Vulin
et al.
Journal articles
hal-01898065v1
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Long-range self-organization of cytoskeletal myosin II filament stacks
Shiqiong Hu
,
Kinjal Dasbiswas
,
Zhenhuan Guo
,
Yee-Han Tee
,
Visalatchi Thiagarajan
et al.
Journal articles
hal-03761727v1
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Balancing a genetic toggle switch by real-time feedback control and periodic forcing
Jean-Baptiste Lugagne
,
Sebastián Sosa Carrillo
,
Melanie Kirch
,
Agnes Köhler
,
Gregory Batt
et al.
Journal articles
hal-01666980v1
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Long-term tracking of budding yeast cells in brightfield microscopy: CellStar and the Evaluation Platform
Cristian Versari
,
Szymon Stoma
,
Kirill Batmanov
,
Artémis Llamosi
,
Filip Mroz
et al.
Journal articles
hal-01547623v1
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Extracellular Vesicle Production Loaded with Nanoparticles and Drugs in a Trade-off between Loading, Yield and Purity: Towards a Personalized Drug Delivery System
Max Piffoux
,
Amanda Silva
,
Jean-Baptiste Lugagne
,
Pascal Hersen
,
Claire Wilhelm
et al.
Journal articles
hal-03761731v1
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Assembly and Characterizations of Bifunctional Fluorescent and Magnetic Microneedles Displaying Length Tunability over One Decade
Jean-Baptiste Lugagne
,
Gwennhaël Brackx
,
Emek Seyrek
,
Sophie Nowak
,
Yann Sivry
et al.
Journal articles
hal-02342490v1
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Age-Related Changes in Locomotor Performance Reveal a Similar Pattern for Caenorhabditis elegans, Mus domesticus, Canis familiaris, Equus caballus, and Homo sapiens
Adrien Marck
,
Geoffroy C.B. Berthelot
,
Vincent Foulonneau
,
Andy Marc
,
Juliana Antero
et al.
Journals of Gerontology Series A: Biological Sciences and Medical Sciences, 2016, 72 (4), pp.455-463. ⟨10.1093/gerona/glw136⟩
Journal articles
hal-01792239v1
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What population reveals about individual cell identity: Single-cell parameter estimation of models of gene expression in yeast
Artémis Llamosi
,
Andres Gonzalez
,
Cristian Versari
,
Eugenio Cinquemani
,
Giancarlo Ferrari-Trecate
et al.
Journal articles
hal-01248298v1
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Out-of-equilibrium stationary states, percolation, and subcritical instabilities in a fully nonconservative system
Mathieu Génois
,
Pascal Hersen
,
Eric Bertin
,
Sylvain Courrech Du Pont
,
Guillaume Grégoire
et al.
Journal articles
hal-02001608v3
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Structured illumination microscopy reveals focal adhesions are composed of linear subunits
Shiqiong Hu
,
Yee-Han Tee
,
Alexandre Kabla
,
Ronen Zaidel-Bar
,
Alexander Bershadsky
et al.
Journal articles
hal-03761721v1
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Combining Spinach-tagged RNA and gene localization to image gene expression in live yeast
David Guet
,
Laura Burns
,
Suman Maji
,
Jérôme Boulanger
,
Pascal Hersen
et al.
Journal articles
hal-01725192v1
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In vivo measurement of signaling cascade dynamics
Megan Mcclean
,
Pascal Hersen
,
Sharad Ramanathan
Journal articles
hal-03761747v1
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High transcript levels of heat-shock genes are associated with shorter lifespan of Caenorhabditis elegans
X. Manière
,
A. Krisko
,
F.X. Pellay
,
J.-M. Di Meglio
,
Pascal Hersen
et al.
Journal articles
hal-03761717v1
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Growing Yeast into Cylindrical Colonies
Clément Vulin
,
Jean-Marc Di Meglio
,
Ariel B. Lindner
,
Adrian Daerr
,
Andrew Murray
et al.
Journal articles
hal-03761718v1
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Severe osmotic compression triggers a slowdown of intracellular signaling, which can be explained by molecular crowding.
Agnès Miermont
,
François Waharte
,
Shiqiong Hu
,
Megan Nicole Mcclean
,
Samuel Bottani
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (14), pp.5725-30. ⟨10.1073/pnas.1215367110⟩
Journal articles
hal-00817393v1
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Spatial structuring and size selection as collective behaviours in an agent-based model for barchan fields.
Mathieu Génois
,
Pascal Hersen
,
Sylvain Courrech Du Pont
,
Guillaume Grégoire
Journal articles
hal-00869412v1
|
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An agent-based model of dune interactions produces the emergence of patterns in deserts
Mathieu Génois
,
Sylvain Courrech Du Pont
,
Pascal Hersen
,
Guillaume Grégoire
Journal articles
hal-00759289v2
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Long-term model predictive control of gene expression at the population and single-cell levels
Jannis Uhlendorf
,
Agnès Miermont
,
Thierry Delaveau
,
Gilles Charvin
,
Francois Fages
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (35), pp.14271-14276. ⟨10.1073/pnas.1206810109⟩
Journal articles
hal-01528440v1
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Locomotion Control of Caenorhabditis elegans through Confinement
Félix Lebois
,
Pascal Sauvage
,
Charlotte Py
,
Olivier Cardoso
,
Benoît Ladoux
et al.
Journal articles
hal-03761705v1
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Evidence of a large-scale mechanosensing mechanism for cellular adaptation to substrate stiffness
Léa Trichet
,
Jimmy Le Digabel
,
Rhoda Hawkins
,
Sri Ram Krishna Vedula
,
Mukund Gupta
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (18), pp.6933-6938. ⟨10.1073/pnas.1117810109⟩
Journal articles
hal-03761708v1
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Emerging modes of collective cell migration induced by geometrical constraints
Sri Ram Krishna Vedula
,
Man Chun Leong
,
Tan Lei Lai
,
Pascal Hersen
,
Alexandre Kabla
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (32), pp.12974-12979. ⟨10.1073/pnas.1119313109⟩
Journal articles
hal-03761712v1
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Cell crawling mediates collective cell migration to close undamaged epithelial gaps
Ester Anon
,
Xavier Serra-Picamal
,
Pascal Hersen
,
Nils Gauthier
,
Michael Sheetz
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (27), pp.10891-10896. ⟨10.1073/pnas.1117814109⟩
Journal articles
hal-03761707v1
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Micro-patterned porous substrates for cell-based assays
Fanny Evenou
,
Jean-Marc Di Meglio
,
Benoit Ladoux
,
Pascal Hersen
Journal articles
hal-03761704v1
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The Dynamical Systems Properties of the HOG Signaling Cascade
Agnès Miermont
,
Jannis Uhlendorf
,
Megan Mcclean
,
Pascal Hersen
Journal articles
hal-03761696v1
|
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Push it, pull it
Pascal Hersen
,
Benoît Ladoux
Journal articles
hal-03761744v1
|
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Running Worms: C. elegans Self-Sorting by Electrotaxis
Xavier Manière
,
Félix Lebois
,
Ivan Matic
,
Benoit Ladoux
,
Jean-Marc Di Meglio
et al.
Journal articles
hal-03761699v1
|
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Mechanics of cell spreading within 3D-micropatterned environments
Marion Ghibaudo
,
Jean-Marc Di Meglio
,
Pascal Hersen
,
Benoit Ladoux
Journal articles
hal-03761693v1
|
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Polygon formation and surface flow on a rotating fluid surface
R. Bergmann
,
L. Tophøj
,
T. Homan
,
P. Hersen
,
A. Andersen
et al.
Journal articles
hal-03761702v1
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Towards Real-Time Control of Gene Expression: in silico Analysis*
Jannis Uhlendorf
,
Pascal Hersen
,
Gregory Batt
Journal articles
hal-03761737v1
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Magnetic micropillars as a tool to govern substrate deformations
Jimmy Le Digabel
,
Nicolas Biais
,
Jérôme Fresnais
,
Jean-François Berret
,
Pascal Hersen
et al.
Journal articles
hal-01378197v1
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Formation and stability of transverse and longitudinal sand dunes
E. Reffet
,
S. Courrech Du Pont
,
P. Hersen
,
S. Douady
Journal articles
hal-03761691v1
|
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Traction forces exerted by epithelial cell sheets
Alexandre Saez
,
Ester Anon
,
Marion Ghibaudo
,
Olivia Du Roure
,
Jean-Marc Di Meglio
et al.
Journal articles
hal-03761689v1
|
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Strength Dependence of Cadherin-Mediated Adhesions
Benoit Ladoux
,
Ester Anon
,
Mireille Lambert
,
Aleksandr Rabodzey
,
Pascal Hersen
et al.
Journal articles
hal-03761686v1
|
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Substrate topography induces a cross-over from 2D to 3D behavior in fibroblast migration
M. Ghibaudo
,
L. Trichet
,
Le Digabel J.
,
A. Richert
,
P. Hersen
et al.
Biophysical Journal, 2009, 97, pp.357-368
Journal articles
hal-00410702v1
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Signal processing by the HOG MAP kinase pathway
P. Hersen
,
M. Mcclean
,
L. Mahadevan
,
S. Ramanathan
Proceedings of the National Academy of Sciences of the United States of America, 2008, 105, pp.7165-7170
Journal articles
hal-00321259v1
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Genetic drift at expanding frontiers promotes gene segregation
O. Hallatschek
,
P. Hersen
,
S. Ramanathan
,
D. Nelson
Proceedings of the National Academy of Sciences of the United States of America, 2007, 104, pp.19926-19930
Journal articles
hal-00321262v1
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The song of the dunes as a self-synchronized instrument
S. Douady
,
A. Manning
,
P. Hersen
,
H. Elbelrhiti
,
S. Protiere
et al.
Physical Review Letters, 2006, 97, pp.018002
Journal articles
hal-00135892v1
|
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Polygons on a Rotating Fluid Surface
Thomas Jansson
,
Martin Haspang
,
Kåre Jensen
,
Pascal Hersen
,
Tomas Bohr
et al.
Journal articles
hal-03761666v1
|
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Song of the Dunes as a Self-Synchronized Instrument
S. Douady
,
A. Manning
,
P. Hersen
,
H. Elbelrhiti
,
S. Protière
et al.
Journal articles
hal-03761661v1
|
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Collision of barchan dunes as a mechanism of size regulation
Pascal Hersen
,
Stéphane Douady
Journal articles
hal-03761654v1
|
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Flow effects on the morphology and dynamics of aeolian and subaqueous barchan dunes
Pascal Hersen
Journal articles
hal-03761625v1
|
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Corridors of barchan dunes: stability and size selection
P. Hersen
,
K. H. Andersen
,
H. Elbelrhiti
,
Bruno Andreotti
,
P. Claudin
et al.
Journal articles
hal-00009356v1
|
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On the crescentic shape of barchan dunes
P. Hersen
Journal articles
hal-03761616v1
|
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Relevant Length Scale of Barchan Dunes
Pascal Hersen
,
Stéphane Douady
,
Bruno Andreotti
Journal articles
hal-03761584v1
|