Isabelle Fournier

58%
Libre accès
191
Documents
Affiliation actuelle
  • Protéomique, Réponse Inflammatoire, Spectrométrie de Masse (PRISM) - U 1192 (PRISM)
Contact

Présentation

Prof. Fournier is Distinguished Professor at University of Lille, and she holds a position as co-director of the PRISM Inserm U1192 Lab and as Vice President for Doctoral Research for the university. She is a bioanalytical chemist specialized in clinical mass spectrometry and proteomics. She started research working on fundamental of MALDI during her PhD at University Pierre & Marie Curie in Paris first and then, as a postdoctoral fellow within the group of Prof. Michael Karas in Frankfurt. In 2002, she established her own group at University of Lille where she started developing MALDI MS Imaging. She contributed to the field with several developments including strategies for imaging of FFPE tissues and proteins, and the development of tagged probes for specific imaging of mRNA and antigens. In 2009, she was hired as Full Professor and awarded a Junior position at Institut Universitaire de France. Since 2012, she got interested by the development of Spatially Resolved Proteomics in combination to MALDI MSI for applications in oncology. Over the past 5 years, she also worked on the development of in vivo MS for guided surgery and intraoperative analysis. She confounded the Imabiotech Company which provides services in MALDI MSI and recently CELEOS that will commercialize the SpiderMass technology. She was recently distinguished by the international distinguish award from MSACL and was awarded a senior position at Institut Universitaire de France in 2019.

Domaines de recherche

Chimie analytique Génomique, Transcriptomique et Protéomique [q-bio.GN] Imagerie

Compétences

mass spectrometry imaging proteomics spatial proteomics lipidomics health technology

Publications

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Publications

Mice lacking the fructose transporter Glut5 exhibit excessive androgens and reduced sperm motility

Aikaterini Kallianioti , Guillaume Bourdon , Jeremy Grandhaye , Claire Chevaleyre , Soulaimane Aboulouard et al.
Endocrinology, 2025, 166 (3), pp.bqaf005. ⟨10.1210/endocr/bqaf005⟩
Article dans une revue hal-05019388 v1

NMFProfiler: a multi-omics integration method for samples stratified in groups

Aurélie Mercadié , Éléonore Gravier , Gwendal Josse , Isabelle Fournier , Cécile Viodé et al.
Bioinformatics, 2025, 41 (2), pp.btaf066. ⟨10.1093/bioinformatics/btaf066⟩
Article dans une revue hal-04992913 v1

Real-time glioblastoma tumor microenvironment assessment by SpiderMass for improved patient management.

Yanis Zirem , Léa Ledoux , Lucas Roussel , Claude Alain Maurage , Pierre Tirilly et al.
Cell Reports Medicine, 2024, pp.101482. ⟨10.1016/j.xcrm.2024.101482⟩
Article dans une revue hal-04527077 v1

The impact and future of artificial intelligence in medical genetics and molecular medicine: an ongoing revolution

Firat Ozcelik , Mehmet Sait Dundar , A. Baki Yildirim , Gary Henehan , Oscar Vicente et al.
Functional and Integrative Genomics, 2024, Functional and Integrative Genomics, 24, pp.138. ⟨10.1007/s10142-024-01417-9⟩
Article dans une revue (article de synthèse) hal-04712663 v1
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Heterogeneity Assessment and Protein Pathway Prediction via Spatial Lipidomic and Proteomic Correlation: Advancing Dry Proteomics concept for Human Glioblastoma Prognosis.

Laurine Lagache , Yanis Zirem , Emilie Le Rhun , Isabelle Fournier , Michel Salzet
Molecular and Cellular Proteomics, 2024, Molecular and Cellular Proteomics, 24 (1), pp.100891. ⟨10.1016/j.mcpro.2024.100891⟩
Article dans une revue hal-04918138 v1
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A co-culture system of macrophages with breast cancer tumoroids to study cell interactions and therapeutic responses

Antonella Raffo Romero , Lydia Ziane Chaouche , Sophie Salome , Nawale Hajjaji , Isabelle Fournier et al.
Cell Reports Methods, 2024, Cell Reports Methods, 4 (6), pp.100792. ⟨10.1016/j.crmeth.2024.100792⟩
Article dans une revue hal-04718878 v1
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Neuronal A2A receptor exacerbates synapse loss and memory deficits in APP/PS1 mice

V. Gomez-Murcia , Agathe Launay , K. Carvalho , A. Burgard , C. Meriaux et al.
Brain - A Journal of Neurology , 2024, Brain - A Journal of Neurology, 147 (8), pp.2691-2705. ⟨10.1093/brain/awae113⟩
Article dans une revue hal-04684882 v1

In Vivo and Real-Time Metabolic Profiling of Plant-Microbe Interactions in Leaves, Stems, and Roots of Bacterially Inoculated Chardonnay Plantlets using SpiderMass

Nina Ogrinc , Essaïd Ait Barka , Christophe Clément , Michel Salzet , Lisa Sanchez et al.
Analytical Chemistry, 2024, Analytical Chemistry, 96 (34), pp.13821-13829. ⟨10.1021/acs.analchem.4c01470⟩
Article dans une revue hal-04718924 v1
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Inhibition of furin in CAR macrophages directs them toward a proinflammatory phenotype and enhances their antitumor activities.

Lydia Ziane Chaouche , Antonella Raffo Romero , Nawale Hajjaji , Firas Kobeissy , Donna Pinheiro et al.
Cell Death and Disease, 2024, Cell Death and Disease, 15, pp.879. ⟨10.1038/s41419-024-07267-4⟩
Article dans une revue hal-04918175 v1
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Deciphering genetic and nongenetic factors underlying tumour dormancy: insights from multiomics analysis of two syngeneic MRD models of melanoma and leukemia

Marie-Oceane Laguillaumie , Sofia Titah , Aurélie Guillemette , Bernadette Neve , Frédéric Leprêtre et al.
Biological Research, 2024, Biological Research, 57 (1), pp.59. ⟨10.1186/s40659-024-00540-y⟩
Article dans une revue hal-04718849 v1
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Fallopian tube lesions as potential precursors of early ovarian cancer: a comprehensive proteomic analysis.

Maxence Wisztorski , Soulaimane Aboulouard , Lucas Roussel , Marie Duhamel , Philippe Saudemont et al.
Cell Death and Disease, 2023, Cell Death and Disease, 14, pp.644. ⟨10.1038/s41419-023-06165-5⟩
Article dans une revue hal-04400929 v1
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OpenProt 2.0 builds a path to the functional characterization of alternative proteins.

S. Leblanc , F. Yala , N. Provencher , J. F. Lucier , M. Levesque et al.
Nucleic Acids Research, 2023, Nucleic Acids Research, ⟨10.1093/nar/gkad1050⟩
Article dans une revue hal-04423840 v1
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Establishment and characterization of canine mammary tumoroids for translational research.

Antonella Raffo Romero , Soulaimane Aboulouard , Emmanuel Bouchaert , Agata Rybicka , Dominique Tierny et al.
BMC Biology, 2023, BMC Biology, 21, pp.23. ⟨10.1186/s12915-023-01516-2⟩
Article dans une revue hal-04401119 v1

Heimdall, an alternative protein issued from a ncRNA related to kappa light chain variable region of immunoglobulins from astrocytes: a new player in neural proteome

Alice Capuz , Sylvain Osien , Tristan Cardon , Mélodie Anne Karnoub , Soulaimane Aboulouard et al.
Cell Death and Disease, 2023, 14 (8), pp.526. ⟨10.1038/s41419-023-06037-y⟩
Article dans une revue hal-04476023 v1

Development of a novel apigenin prodrug programmed for alkaline-phosphatase instructed self-inhibition to combat cancer.

D. Diamantis , A. D. Tsiailanis , C. Papaemmanouil , M. C. Nika , Z. Kanaki et al.
Journal of Biomolecular Structure and Dynamics, 2023, Journal of Biomolecular Structure and Dynamics, pp.1-22. ⟨10.1080/07391102.2023.2247083⟩
Article dans une revue hal-04400762 v1

From precise surgery to precision surgery: The multiple dimensions of therapeutic precision for head and neck cancer

Antoine Galmiche , Zuzana Saidak , Emmanuel Babin , Esteban Brenet , Julien Davrou et al.
Journal of Stomatology, Oral and Maxillofacial Surgery, 2023, ⟨10.1016/j.jormas.2022.11.018⟩
Article dans une revue hal-03881465 v1
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Employing non-targeted interactomics approach and subcellular fractionation to increase our understanding of the ghost proteome

Diego-Fernando Garcia del Rio , Tristan Cardon , S. Eyckerman , Isabelle Fournier , Amelie Bonnefond et al.
iScience, 2023, Iscience, 26, pp.105943. ⟨10.1016/j.isci.2023.105943⟩
Article dans une revue hal-04401042 v1
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Heimdall, an alternative protein issued from a ncRNA related to kappa light chain variable region of immunoglobulins from astrocytes: a new player in neural proteome.

Alice Capuz , Sylvain Osien , Tristan Cardon , Melodie-Anne Karnoub , Soulaimane Aboulouard et al.
Cell Death Dis, 2023, Cell Death Dis, 14, pp.526. ⟨10.1038/s41419-023-06037-y⟩
Article dans une revue hal-04400988 v1
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Protocol to identify human subcellular alternative protein interactions using cross-linking mass spectrometry.

Diego-Fernando Garcia del Rio , Isabelle Fournier , Tristan Cardon , Michel Salzet
STAR Protocols, 2023, STAR Protocols, 4 (3), pp.102380. ⟨10.1016/j.xpro.2023.102380⟩
Article dans une revue hal-04400811 v1
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Astrocytes express aberrant immunoglobulins as putative gatekeeper of astrocytes to neuronal progenitor conversion

Alice Capuz , Sylvain Osien , Melodie-Anne Karnoub , Soulaimane Aboulouard , Estelle Laurent et al.
Cell Death and Disease, 2023, Cell Death and Disease, 14 (4), pp.237. ⟨10.1038/s41419-023-05737-9⟩
Article dans une revue hal-04278200 v2
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Comparing MS imaging of lipids by WALDI and MALDI: two technologies for evaluating a common ground truth in MS imaging.

Lea Ledoux , Yanis Zirem , Florence Renaud , Ludovic Duponchel , Michel Salzet et al.
Analyst, 2023, Analyst, 148, pp.4982-4986. ⟨10.1039/d3an01096a⟩
Article dans une revue hal-04401014 v2
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Prophylactic Radical Fimbriectomy with Delayed Oophorectomy in Women with a High Risk of Developing an Ovarian Carcinoma: Results of a Prospective National Pilot Study

Éric Leblanc , Fabrice Narducci , Gwénaël Ferron , Audrey Mailliez , Jean Yves Charvolin et al.
Cancers, 2023, 15 (4), ⟨10.3390/cancers15041141⟩
Article dans une revue hal-04068556 v1

Correction: Heimdall, an alternative protein issued from a ncRNA related to kappa light chain variable region of immunoglobulins from astrocytes: a new player in neural proteome

Alice Capuz , Sylvain Osien , Tristan Cardon , Mélodie Anne Karnoub , Soulaimane Aboulouard et al.
Cell Death and Disease, 2023, 14 (10), pp.677. ⟨10.1038/s41419-023-06143-x⟩
Article dans une revue hal-04278155 v1

Heimdall, an alternative protein issued from a ncRNA related to kappa light chain variable region of immunoglobulins from astrocytes: a new player in neural proteome

Alice Capuz , Sylvain Osien , Tristan Cardon , Mélodie Anne Karnoub , Soulaimane Aboulouard et al.
Cell Death and Disease, 2023, 14 (8), pp.526. ⟨10.1038/s41419-023-06037-y⟩
Article dans une revue hal-04528686 v1
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Challenges in glioblastoma research: focus on the tumor microenvironment

Andreas Bikfalvi , Cristine Alves da Costa , Tony Avril , Jean-Vianney Barnier , Luc Bauchet et al.
Trends in Cancer, 2023, 9 (1), pp.9-27. ⟨10.1016/j.trecan.2022.09.005⟩
Article dans une revue hal-03860005 v1

Early Diagnosis: End-to-End CNN–LSTM Models for Mass Spectrometry Data Classification

Khawla Seddiki , Frédéric Precioso , Melissa Sanabria , Michel Salzet , Isabelle Fournier et al.
Analytical Chemistry, 2023, 95 (36), pp.13431-13437. ⟨10.1021/acs.analchem.3c00613⟩
Article dans une revue hal-04459618 v1
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Direct In Vivo Analysis of CBD- and THC-Acid Cannabinoids and Classification of Cannabis Cultivars Using SpiderMass.

Nina Ogrinc , S. Schneider , A. Bourmaud , N. Gengler , Michel Salzet et al.
Metabolites, 2022, Metabolites, 12, ⟨10.3390/metabo12060480⟩
Article dans une revue hal-04412905 v1
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On-tissue spatially resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape

Stacy Alyse Malaker , Jusal Quanico , Antonella Raffo-Romero , Firas Kobeissy , Soulaimane Aboulouard et al.
Cell Chemical Biology, 2022, 29 (1), pp.30-42.e4. ⟨10.1016/j.chembiol.2021.05.007⟩
Article dans une revue hal-04460596 v1
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Mass Spectrometry-Based Differentiation of Oral Tongue Squamous Cell Carcinoma and Nontumor Regions With the SpiderMass Technology

Nina Ogrinc , Christophe Attencourt , Emilien Colin , Ahmed Boudahi , Riad Tebbakha et al.
Frontiers in Oral Health, 2022, 3, ⟨10.3389/froh.2022.827360⟩
Article dans une revue hal-03722795 v1

Trop-2, Na+/K+ ATPase, CD9, PKCα, cofilin assemble a membrane signaling super-complex that drives colorectal cancer growth and invasion

Emanuela Guerra , Valeria Relli , Martina Ceci , Romina Tripaldi , Pasquale Simeone et al.
Oncogene, 2022, 41 (12), pp.1795-1808. ⟨10.1038/s41388-022-02220-1⟩
Article dans une revue hal-04460581 v1

The Antibody Dependant Neurite Outgrowth Modulation Response Involvement in Spinal Cord Injury

Alice Capuz , Mélodie-Anne Karnoub , Sylvain Osien , Mélanie Rose , Céline Mériaux et al.
Frontiers in Immunology, 2022, 13, ⟨10.3389/fimmu.2022.882830⟩
Article dans une revue hal-04278167 v1
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Spatial analysis of the glioblastoma proteome reveals specific molecular signatures and markers of survival.

Marie Duhamel , L. Drelich , Maxence Wisztorski , Soulaimane Aboulouard , Jean-Pascal Gimeno et al.
Nature Communications, 2022, Nature Communications, 13, pp.6665. ⟨10.1038/s41467-022-34208-6⟩
Article dans une revue hal-04212126 v1
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Path to clonal theranostics in luminal breast cancers

Nawale Hajjaji , Soulaimane Aboulouard , Tristan Cardon , Delphine Bertin , Yves-Marie Robin et al.
Frontiers in Oncology, 2022, Frontiers in Oncology, 11, pp.802177. ⟨10.3389/fonc.2021.802177⟩
Article dans une revue hal-04022193 v1

Neurotrauma investigation through spatial omics guided by mass spectrometry imaging: Target identification and clinical applications

Khalil Mallah , Kazem Zibara , Coline Kerbaj , Ali Eid , Nour Khoshman et al.
Mass Spectrometry Reviews, 2021, 42 (1), pp.189-205. ⟨10.1002/mas.21719⟩
Article dans une revue hal-04443805 v1
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Protein kinase c activation drives a differentiation program in an oligodendroglial precursor model through the modulation of specific biological networks

Marina Damato , Tristan Cardon , Maxence Wisztorski , Isabelle Fournier , Damiana Pieragostino et al.
International Journal of Molecular Sciences, 2021, International Journal of Molecular Sciences, 22 (10), pp.5245. ⟨10.3390/ijms22105245⟩
Article dans une revue hal-03967287 v1
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The NANOTUMOR consortium - Towards the Tumor Cell Atlas

Florent Colin , Kristine Schauer , Ali Hamiche , Pierre Martineau , Jean-Paul Borg et al.
Biology of the Cell, 2021, 113 (6), pp.272-280. ⟨10.1111/boc.202000135⟩
Article dans une revue hal-03169719 v1
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Apport des outils de chemobiologie à l’imagerie par spectrométrie de masse

David Touboul , Isabelle Fournier
L'Actualité Chimique, 2021
Article dans une revue (article de synthèse) hal-03840976 v1
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Unveiling a ghost proteome in the glioblastoma non-coding rnas

Tristan Cardon , Isabelle Fournier , Michel Salzet
Frontiers in Cell and Developmental Biology, 2021, Frontiers in Cell and Developmental Biology, 9, pp.703583. ⟨10.3389/fcell.2021.703583⟩
Article dans une revue hal-04011459 v1
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Shedding Light on the Ghost Proteome

Tristan Cardon , Isabelle Fournier , Michel Salzet
Trends in Biochemical Sciences, 2021, 46 (3), pp.239-250. ⟨10.1016/j.tibs.2020.10.003⟩
Article dans une revue hal-04446903 v1
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Robot-assisted spidermass for in vivo real-time topography mass spectrometry imaging

Nina Ogrinc , Alexandre Kruszewski , Paul Chaillou , Philippe Saudemont , Chann Lagadec et al.
Analytical Chemistry, 2021, Analytical Chemistry, ⟨10.1021/acs.analchem.1c01692⟩
Article dans une revue hal-03990566 v1
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Surfaceome proteomic of glioblastoma revealed potential targets for immunotherapy

Melanie Rose , Tristan Cardon , Soulaimane Aboulouard , Nawale Hajjaji , Firas Kobeissy et al.
Frontiers in Immunology, 2021, Frontiers in Immunology, 12, pp.746168. ⟨10.3389/fimmu.2021.746168⟩
Article dans une revue hal-04009596 v1
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Therapeutic anti-glioma effect of the combined action of pcsk inhibitor with the anti-tumoral factors secreted by poly (i:c)-stimulated macrophages

Melanie Rose , Marie Duhamel , Soulaimane Aboulouard , Firas Kobeissy , Dominique Tierny et al.
Cancer Gene Therapy, 2021, Cancer Gene Therapy, 29, pp.22-36. ⟨10.1038/s41417-020-00286-1⟩
Article dans une revue hal-04009706 v1
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Persistence of coxsackievirus b4 in pancreatic ? cells disturbs insulin maturation, pattern of cellular proteins, and dna methylation

Magloire Pandoua Nekoua , Antoine Bertin , Famara Sane , Jean-Pascal Gimeno , Isabelle Fournier et al.
Microorganisms, 2021, Microorganisms, 9 (6), pp.1125. ⟨10.3390/microorganisms9061125⟩
Article dans une revue hal-03955619 v1

Persistence of Coxsackievirus B4 in Pancreatic β Cells Disturbs Insulin Maturation, Pattern of Cellular Proteins, and DNA Methylation

Magloire Pandoua Nekoua , Antoine Bertin , Famara Sane , Jean-Pascal Gimeno , Isabelle Fournier et al.
Microorganisms, 2021, 9 (6), pp.1125. ⟨10.3390/microorganisms9061125⟩
Article dans une revue inserm-04456755 v1
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Direct water-assisted laser desorption/ionization mass spectrometry lipidomic analysis and classification of formalin-fixed paraffin-embedded sarcoma tissues without dewaxing

Nina Ogrinc , Pierre-Damien Caux , Yves-Marie Robin , Emmanuel Bouchaert , Benoit Fatou et al.
Clinical chemistry, 2021, 67 (11), pp.1513-1523. ⟨10.1093/clinchem/hvab160⟩
Article dans une revue hal-04019390 v1
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In utero exposure to metformin reduces the fertility of male offspring in adulthood

Mélanie C. Faure , Rita Khoueiry , Jusal Quanico , Hervé Acloque , Marie-Justine Guerquin et al.
Frontiers in Endocrinology, 2021, 12, pp.1-18. ⟨10.3389/fendo.2021.750145⟩
Article dans une revue hal-03462578 v1
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In-depth proteomics analysis of sentinel lymph nodes from individuals with endometrial cancer

Soulaimane Aboulouard , Maxence Wisztorski , Marie Duhamel , Philippe Saudemont , Tristan Cardon et al.
Cell Reports Medicine, 2021, Cell Reports Medicine, 2 (6), pp.100318. ⟨10.1016/j.xcrm.2021.100318⟩
Article dans une revue hal-04009565 v1
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Toward high spatially resolved proteomics using expansion microscopy

Lauranne Drelich , Soulaimane Aboulouard , Julien Franck , Michel Salzet , Isabelle Fournier et al.
Analytical Chemistry, 2021, Analytical Chemistry, 93 (36), pp.12195-12203. ⟨10.1021/acs.analchem.0c05372⟩
Article dans une revue hal-04011475 v1
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Location of neonatal microglia drives small extracellular vesicles content and biological functions in vitro

Adriana-Natalia Murgoci , Marie Duhamel , Antonella Raffo-Romero , Khalil Mallah , Soulaimane Aboulouard et al.
Journal of Extracellular Vesicles, 2020, 9 (1), pp.1727637. ⟨10.1080/20013078.2020.1727637⟩
Article dans une revue inserm-02941810 v1
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Openprot 2021: deeper functional annotation of the coding potential of eukaryotic genomes

Marie A. Brunet , Jean-Francois Lucier , Maxime Levesque , Sebastien Leblanc , Jean-Francois Jacques et al.
Nucleic Acids Research, 2020, Nucleic Acids Research, 49 (D1), pp.D380-D388. ⟨10.1093/nar/gkaa1036⟩
Article dans une revue hal-04028636 v1

Spinal Cord Injury: Animal Models, Imaging Tools and the Treatment Strategies

Dasa Cizkova , Adriana-Natalia Murgoci , Veronika Cubinkova , Filip Humenik , Zuzana Mojzisova et al.
Neurochemical Research, 2020, 45 (1), pp.134-143. ⟨10.1007/s11064-019-02800-w⟩
Article dans une revue inserm-02941635 v1
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Carbonic Anhydrase XII Expression Is Modulated during Epithelial Mesenchymal Transition and Regulated through Protein Kinase C Signaling

Daniele Vergara , Sara Ravaioli , Eugenio Fonzi , Loredaria Adamo , Marina Damato et al.
International Journal of Molecular Sciences, 2020, 21 (3), pp.715. ⟨10.3390/ijms21030715⟩
Article dans une revue inserm-02941786 v1
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Reference and Ghost Proteins Identification in Rat C6 Glioma Extracellular Vesicles

Adriana-Natalia Murgoci , Tristan Cardon , Soulaimane Aboulouard , Marie Duhamel , Isabelle Fournier et al.
iScience, 2020, 23 (5), pp.101045. ⟨10.1016/j.isci.2020.101045⟩
Article dans une revue inserm-02941792 v1
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Cumulative learning enables convolutional neural network representations for small mass spectrometry data classification

Khawla Seddiki , Philippe Saudemont , Frédéric Precioso , Nina Ogrinc , Maxence Wisztorski et al.
Nature Communications, 2020, 11 (1), pp.5595. ⟨10.1038/s41467-020-19354-z⟩
Article dans une revue hal-03132326 v1
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Mechanisms of innate events during skin reaction following intradermal injection of seasonal influenza vaccine

Jessica Gonnet , Lauranne Poncelet , Celine Meriaux , Elena Gonçalves , Lina Weiss et al.
Journal of Proteomics, 2020, 216, pp.103670. ⟨10.1016/j.jprot.2020.103670⟩
Article dans une revue hal-03984601 v2

Epigenetic Studies Revealed a Ghost Proteome in PC1/3 KD Macrophages under Antitumoral Resistance Induced by IL-10

Tristan Cardon , Bilgehan Ozcan , Soulaimane Aboulouard , Firas Kobeissy , Marie Duhamel et al.
Article dans une revue hal-04445712 v1
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Alternative proteins are functional regulators in cell reprogramming by PKA activation

Tristan Cardon , Julien Franck , Etienne Coyaud , Estelle Laurent , Marina Damato et al.
Nucleic Acids Research, 2020, 48 (14), pp.7864-7882. ⟨10.1093/nar/gkaa277⟩
Article dans une revue inserm-02941812 v1
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The Role of a Proprotein Convertase Inhibitor in Reactivation of Tumor-Associated Macrophages and Inhibition of Glioma Growth

Mélanie Rose , Marie Duhamel , Soulaimane Aboulouard , Firas Kobeissy , Emilie Le Rhun et al.
Molecular Therapy - Oncolytics, 2020, 17, pp.31-46. ⟨10.1016/j.omto.2020.03.005⟩
Article dans une revue inserm-02940430 v1

A Hidden Human Proteome Signature Characterizes the Epithelial Mesenchymal Transition Program

Daniele Vergara , Tiziano Verri , Marina Damato , Marco Trerotola , Pasquale Simeone et al.
Current Pharmaceutical Design, 2020, 26 (3), pp.372-375. ⟨10.2174/1381612826666200129091610⟩
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Sars-cov-2 interactome with human ghost proteome: a neglected world encompassing a wealth of biological data

Tristan Cardon , Isabelle Fournier , Michel Salzet
Microorganisms, 2020, Microorganisms, 8 (12), pp.2036. ⟨10.3390/microorganisms8122036⟩
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Matrix-Assisted Laser Desorption/Ionization-Mass Spectrometry Imaging of Lipids in Experimental Model of Traumatic Brain Injury Detecting Acylcarnitines as Injury Related Markers

Khalil Mallah , Jusal Quanico , Antonella Raffo-Romero , Tristan Cardon , Soulaimane Aboulouard et al.
Analytical Chemistry, 2019, 91 (18), pp.11879-11887. ⟨10.1021/acs.analchem.9b02633⟩
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Distinct Protein Expression Networks are Activated in Microglia Cells after Stimulation with IFN-γ and IL-4

Daniele Vergara , Annamaria Nigro , Alessandro Romano , Stefania de Domenico , Marina Damato et al.
Cells, 2019, 8 (6), pp.580. ⟨10.3390/cells8060580⟩
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Optimizing the substrate-mediated laser ablation of biological tissues: Quest for the best substrate material

T. Maulouet , B. Fatou , C. Focsa , M. Salzet , I. Fournier et al.
Applied Surface Science, 2019, 473, pp.486-492. ⟨10.1016/j.apsusc.2018.12.173⟩
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Canine Bone Marrow-derived Mesenchymal Stem Cells: Genomics, Proteomics and Functional Analyses of Paracrine Factors

Filip Humenik , Dasa Cizkova , Stefan Cikos , Lenka Luptakova , Aladar Madari et al.
Molecular and Cellular Proteomics, 2019, 18 (9), pp.1824-1835. ⟨10.1074/mcp.RA119.001507⟩
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The multiverse nature of epithelial to mesenchymal transition

Pasquale Simeone , Marco Trerotola , Julien Franck , Tristan Cardon , Marco Marchisio et al.
Seminars in Cancer Biology, 2019, 58, pp.1-10. ⟨10.1016/j.semcancer.2018.11.004⟩
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Nuclei of HeLa cells interactomes unravel a network of ghost proteins involved in proteins translation

Tristan Cardon , Michel Salzet , Julien Franck , Isabelle Fournier
Biochimica et Biophysica Acta (BBA) - General Subjects, 2019, 1863 (10), pp.1458-1470. ⟨10.1016/j.bbagen.2019.05.009⟩
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Proteomic profile of high-risk luminal A early breast cancers.

Nawale Hajjaji , Soulaimane Aboulouard , Yves-Marie Robin , Delphine Bertin , Isabelle Fournier et al.
Journal of Clinical Oncology, 2019, 37 (15_suppl), pp.3077-3077. ⟨10.1200/JCO.2019.37.15_suppl.3077⟩
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A specific lipid metabolic profile is associated with the epithelial mesenchymal transition program

Anna Maria Giudetti , Stefania de Domenico , Andrea Ragusa , Paola Lunetti , Antonio Gaballo et al.
Biochimica et Biophysica Acta Molecular and Cell Biology of Lipids, 2019, 1864 (3), pp.344-357. ⟨10.1016/j.bbalip.2018.12.011⟩
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Proteomic characterisation of leech microglia extracellular vesicles (EVs): comparison between differential ultracentrifugation and Optiprep™ density gradient isolation

T Arab , A Raffo-Romero , C van Camp , Q Lemaire , F Le Marrec-Croq et al.
Journal of Extracellular Vesicles, 2019, 8 (1), pp.1603048. ⟨10.1080/20013078.2019.1603048⟩
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Optimized Sample Preparation Workflow for Improved Identification of Ghost Proteins

Tristan Cardon , Flore Hervé , Vivian Delcourt , Xavier Roucou , Michel Salzet et al.
Analytical Chemistry, 2019, 92 (1), pp.1122-1129. ⟨10.1021/acs.analchem.9b04188⟩
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Water-assisted laser desorption/ionization mass spectrometry for minimally invasive in vivo and real-time surface analysis using SpiderMass

Nina Ogrinc , Philippe Saudemont , Julia Balog , Yves-Marie Robin , Jean-Pascal Gimeno et al.
Nature Protocols, 2019, 14 (11), pp.3162-3182. ⟨10.1038/s41596-019-0217-8⟩
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OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes

Marie A Brunet , Mylène Brunelle , Jean-François Lucier , Vivian Delcourt , Maxime Levesque et al.
Nucleic Acids Research, 2019, 8 (47(D1)), pp.D403-D410. ⟨10.1093/nar/gky936⟩
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Mass spectrometry-based intraoperative tumor diagnostics: a letter in reply

Isabelle Fournier , Michel Salzet
Future Science OA, 2019, 5 (7), pp.FSO403. ⟨10.2144/fsoa-2019-0037⟩
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Utilisation of Ambient Laser Desorption Ionisation Mass Spectrometry (ALDI-MS) Improves Lipid-Based Microbial Species Level Identification

Simon Cameron , Zsolt Bodai , Burak Temelkuran , Alvaro Perdones-Montero , Frances Bolt et al.
Scientific Reports, 2019, 9 (1), pp.3006. ⟨10.1038/s41598-019-39815-w⟩
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Mapping Spatiotemporal Microproteomics Landscape in Experimental Model of Traumatic Brain Injury Unveils a link to Parkinson's Disease

Khalil Mallah , Jusal Quanico , Antonella Raffo-Romero , Tristan Cardon , Soulaimane Aboulouard et al.
Molecular and Cellular Proteomics, 2019, 18 (8), pp.1669-1682. ⟨10.1074/mcp.RA119.001604⟩
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Brain-Cortex Microglia-Derived Exosomes: Nanoparticles for Glioma Therapy

Adriana-Natalia Murgoci , Dasa Cizkova , Petra Majerova , Eva Petrovova , Lubomir Medvecky et al.
ChemPhysChem, 2018, 19 (10), pp.1205-1214. ⟨10.1002/cphc.201701198⟩
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Lipid Changes Associated with Traumatic Brain Injury Revealed by 3D MALDI-MSI

Khalil Mallah , Jusal Quanico , Dennis Trede , Firas Kobeissy , Kazem Zibara et al.
Analytical Chemistry, 2018, 90 (17), pp.10568-10576. ⟨10.1021/acs.analchem.8b02682⟩
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Real time and in vivo pharmaceutical and environmental studies with SpiderMass instrument

B. Fatou , P. Saudemont , M. Duhamel , Michael Ziskind , C. Focsa et al.
Journal of Biotechnology, 2018, 281, pp.61-66. ⟨10.1016/j.jbiotec.2018.06.339⟩
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β-catenin knockdown promotes NHERF1-mediated survival of colorectal cancer cells: implications for a double-targeted therapy

Concetta Saponaro , Sara Sergio , Antonio Coluccia , Maria de Luca , Giuseppe La Regina et al.
Oncogene, 2018, 37 (24), pp.3301-3316. ⟨10.1038/s41388-018-0170-y⟩
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Deciphering molecular consequences of the proprotein convertase 1/3 inhibition in macrophages for application in anti-tumour immunotherapy

Franck Rodet , Alice Capuz , Tsukasa Hara , Rinaldo van Meel , Marie Duhamel et al.
Journal of Biotechnology, 2018, 282, pp.80-85. ⟨10.1016/j.jbiotec.2018.07.002⟩
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Proteomic expression profile of injured rat peripheral nerves revealed biological networks and processes associated with nerve regeneration

Daniele Vergara , Alessandro Romano , Eleonora Stanca , Velia La Pesa , Laura Aloisi et al.
Journal of Cellular Physiology, 2018, 233 (8), pp.6207-6223. ⟨10.1002/jcp.26478⟩
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Temporally and spatially-resolved microproteomics and MALDI MSI lipidomic analysis for traumatic brain injury biomarker identification

Khalil Mallah , Jusal Quanico , Firas Kobeissy , Kazem Zibara , Michel Salzet et al.
African Journal of Biotechnology, 2018, 280S, pp.S8. ⟨10.1016/j.jbiotec.2018.06.327⟩
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Remote Atmospheric Pressure Infrared Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry (Remote IR-MALDI MS) of Proteins

Benoit Fatou , Michael Ziskind , Philippe Saudemont , Jusal Quanico , Cristian Focsa et al.
Molecular and Cellular Proteomics, 2018, 17 (8), pp.1637-1649. ⟨10.1074/mcp.TIR117.000582⟩
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The Protein Coded by a Short Open Reading Frame, Not by the Annotated Coding Sequence, Is the Main Gene Product of the Dual-Coding Gene MIEF1

Vivian Delcourt , Mylène Brunelle , Annie Roy , Jean-François Jacques , Michel Salzet et al.
Molecular and Cellular Proteomics, 2018, 17 (12), pp.2402-2411. ⟨10.1074/mcp.RA118.000593⟩
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Small Proteins Encoded by Unannotated ORFs are Rising Stars of the Proteome, Confirming Shortcomings in Genome Annotations and Current Vision of an mRNA

Vivian Delcourt , Antanas Staskevicius , Michel Salzet , Isabelle Fournier , Xavier Roucou
Proteomics, 2018, 18 (10), pp.1700058. ⟨10.1002/pmic.201700058⟩
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3D MALDI mass spectrometry imaging reveals specific localization of long-chain acylcarnitines within a 10-day time window of spinal cord injury

Jusal Quanico , Lena Hauberg-Lotte , Stephanie Devaux , Zahra Laouby , Celine Meriaux et al.
Scientific Reports, 2018, 8 (1), pp.16083. ⟨10.1038/s41598-018-34518-0⟩
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Localized Intrathecal Delivery of Mesenchymal Stromal Cells Conditioned Medium Improves Functional Recovery in a Rat Model of Spinal Cord Injury

Dasa Cizkova , Veronika Cubinkova , Tomas Smolek , Adriana-Natalia Murgoci , Jan Danko et al.
International Journal of Molecular Sciences, 2018, 19 (3), pp.870. ⟨10.3390/ijms19030870⟩
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Paclitaxel Treatment and Proprotein Convertase 1/3 (PC1/3) Knockdown in Macrophages is a Promising Antiglioma Strategy as Revealed by Proteomics and Cytotoxicity Studies

Marie Duhamel , Mélanie Rose , Franck Rodet , Adriana Natalia Murgoci , Lea Zografidou et al.
Molecular and Cellular Proteomics, 2018, 17 (6), pp.1126-1143. ⟨10.1074/mcp.RA117.000443⟩
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Can real time molecular analyses change the paradigm of dog sarcoma diagnosis and classification?

Isabelle Fournier , Philippe Saudemont , Jusal Quanico , Benoit Fatou , Kevin Minier et al.
Journal of Biotechnology, 2018, 280, pp.S4. ⟨10.1016/j.jbiotec.2018.06.315⟩
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Spatially-Resolved Top-down Proteomics Bridged to MALDI MS Imaging Reveals the Molecular Physiome of Brain Regions

Vivian Delcourt , Julien Franck , Jusal Quanico , Jean-Pascal Gimeno , Maxence Wisztorski et al.
Molecular and Cellular Proteomics, 2018, 17 (2), pp.357-372. ⟨10.1074/mcp.M116.065755⟩
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Shedding new light on spinal cord injury

Michel Salzet , Jusal Quanico , Dasa Cizkova , Melodie Anne Karnoub , Zarha Laouby et al.
Journal of Biotechnology, 2018, 280, pp.S4. ⟨10.1016/j.jbiotec.2018.06.314⟩
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Real-Time Molecular Diagnosis of Tumors Using Water-Assisted Laser Desorption/Ionization Mass Spectrometry Technology

Philippe Saudemont , Jusal Quanico , Yves-Marie Robin , Anna Baud , Julia Balog et al.
Cancer Cell, 2018, 34 (5), pp.840-851.e4. ⟨10.1016/j.ccell.2018.09.009⟩
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Integrated mass spectrometry imaging and omics workflows on the same tissue section using grid-aided, parafilm-assisted microdissection

Jusal Quanico , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier
Biochimica et Biophysica Acta (BBA) - General Subjects, 2017, 1861 (7), pp.1702-1714. ⟨10.1016/j.bbagen.2017.03.006⟩
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β-Catenin Knockdown Affects Mitochondrial Biogenesis and Lipid Metabolism in Breast Cancer Cells

Daniele Vergara , Eleonora Stanca , Flora Guerra , Paola Priore , Antonio Gaballo et al.
Frontiers in Physiology, 2017, 8, ⟨10.3389/fphys.2017.00544⟩
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ATP Modifies the Proteome of Extracellular Vesicles Released by Microglia and Influences Their Action on Astrocytes

Francesco Drago , Marta Lombardi , Ilaria Prada , Martina Gabrielli , Pooja Joshi et al.
Frontiers in Pharmacology, 2017, 8, pp.910. ⟨10.3389/fphar.2017.00910⟩
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Combined Mass Spectrometry Imaging and Top-down Microproteomics Reveals Evidence of a Hidden Proteome in Ovarian Cancer

Vivian Delcourt , Julien Franck , Eric Leblanc , Fabrice Narducci , Yves-Marie Robin et al.
EBioMedicine, 2017, 21, pp.55-64. ⟨10.1016/j.ebiom.2017.06.001⟩
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ATP Modifies the Proteome of Extracellular Vesicles Released by Microglia and Influences Their Action on Astrocytes

Francesco Drago , Marta Lombardi , Ilaria Prada , Martina Gabrielli , Pooja Joshi et al.
Frontiers in Pharmacology, 2017, 8, ⟨10.3389/fphar.2017.00910⟩
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NanoLC-MS coupling of liquid microjunction microextraction for on-tissue proteomic analysis

Jusal Quanico , Julien Franck , Tristan Cardon , Eric Leblanc , Maxence Wisztorski et al.
Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2017, 1865 (7), pp.891-900. ⟨10.1016/j.bbapap.2016.11.002⟩
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β-Catenin Knockdown Affects Mitochondrial Biogenesis and Lipid Metabolism in Breast Cancer Cells

Daniele Vergara , Eleonora Stanca , Flora Guerra , Paola Priore , Antonio Gaballo et al.
Frontiers in Physiology, 2017, 8, pp.544. ⟨10.3389/fphys.2017.00544⟩
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Evaluation of non-supervised MALDI mass spectrometry imaging combined with microproteomics for glioma grade III classification

Emilie Le Rhun , Marie Duhamel , Maxence Wisztorski , Jean-Pascal Gimeno , Fahed Zairi et al.
Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2017, 1865 (7), pp.875-890. ⟨10.1016/j.bbapap.2016.11.012⟩
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Proteomic and transcriptomic investigation of acne vulgaris microcystic and papular lesions: Insights in the understanding of its pathophysiology

Jusal Quanico , Jean-Pascal Gimeno , Florence Nadal-Wollbold , Christiane Casas , Sandrine Alvarez-Georges et al.
Biochimica et Biophysica Acta (BBA) - General Subjects, 2017, 1861 (3), pp.652-663. ⟨10.1016/j.bbagen.2016.10.021⟩
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RhoA Inhibitor Treatment At Acute Phase of Spinal Cord Injury May Induce Neurite Outgrowth and Synaptogenesis

Stephanie Devaux , Dasa Cizkova , Khalil Mallah , Melodie Anne Karnoub , Zahra Laouby et al.
Molecular and Cellular Proteomics, 2017, 16 (8), pp.1394 - 1415. ⟨10.1074/mcp.M116.064881⟩
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Proprotein convertase 1/3 inhibited macrophages: A novel therapeutic based on drone macrophages

Marie Duhamel , Franck Rodet , Adriana Murgoci , Maxence Wisztorski , Robert Day et al.
EuPA Open Proteomics, 2016, 11, pp.20-22. ⟨10.1016/j.euprot.2016.03.003⟩
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Translating epithelial mesenchymal transition markers into the clinic: Novel insights from proteomics

Daniele Vergara , Pasquale Simeone , Julien Franck , Marco Trerotola , Anna Giudetti et al.
EuPA Open Proteomics, 2016, 10, pp.31-41. ⟨10.1016/j.euprot.2016.01.003⟩
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Laser induced post-desolvation of MALDI clusters

Laurent Diologent , Gérard Bolbach , Cristian Focsa , Michael Ziskind , Isabelle Fournier
International Journal of Mass Spectrometry, 2016, 416, pp.29-36. ⟨10.1016/j.ijms.2016.12.005⟩
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The proprotein convertase PC1/3 regulates TLR9 trafficking and the associated signaling pathways

M. Duhamel , F. Rodet , A. Murgoci , R. Desjardins , H. Gagnon et al.
Scientific Reports, 2016, 6, pp.19360. ⟨10.1038/srep19360⟩
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In vivo Real-Time Mass Spectrometry for Guided Surgery Application

Benoit Fatou , Philippe Saudemont , Eric Leblanc , Denis Vinatier , Violette Mesdag et al.
Scientific Reports, 2016, 6, pp.25919. ⟨10.1038/srep25919⟩
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Proteomic Analysis of the Spatio-temporal Based Molecular Kinetics of Acute Spinal Cord Injury Identifies a Time- and Segment-specific Window for Effective Tissue Repair

Stephanie Devaux , Dasa Cizkova , Jusal Quanico , Julien Franck , Serge Nataf et al.
Molecular and Cellular Proteomics, 2016, 15 (8), pp.2641-2670. ⟨10.1074/mcp.M115.057794⟩
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The proprotein convertase PC1/3 regulates TLR9 trafficking and the associated signaling pathways

M. Duhamel , F. Rodet , A. Murgoci , R. Desjardins , H. Gagnon et al.
Scientific Reports, 2016, 6 (1), pp.19360. ⟨10.1038/srep19360⟩
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Spatially-resolved protein surface microsampling from tissue sections using liquid extraction surface analysis

Maxence Wisztorski , Annie Desmons , Jusal Quanico , Benoit Fatou , Jean-Pascal Gimeno et al.
Proteomics, 2016, 16 (11-12), pp.1622-1632. ⟨10.1002/pmic.201500508⟩
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A Proteomic Analysis of Human Uterine Myoma

Antonio Rizzello , Julien Franck , Marcello Pellegrino , Francesco Nuccio , Pasquale Simeone et al.
Current Protein and Peptide Science, 2016, 18 (2), pp.167-174. ⟨10.2174/1389203717666160322150603⟩
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On-tissue Direct Monitoring of Global Hydrogen/Deuterium Exchange by MALDI Mass Spectrometry: Tissue Deuterium Exchange Mass Spectrometry (TDXMS)

Jusal Quanico , Julien Franck , Michel Salzet , Isabelle Fournier
Molecular and Cellular Proteomics, 2016, 15 (10), pp.3321-3330. ⟨10.1074/mcp.O116.059832⟩
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Molecular Consequences of Proprotein Convertase 1/3 (PC1/3) Inhibition in Macrophages for Application to Cancer Immunotherapy: A Proteomic Study

M. Duhamel , F. Rodet , N. Delhem , F. Vanden Abeele , F. Kobeissy et al.
Molecular and Cellular Proteomics, 2015, 14 (11), pp.2857-77. ⟨10.1074/mcp.M115.052480⟩
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Parafilm-assisted microdissection: a sampling method for mass spectrometry-based identification of differentially expressed prostate cancer protein biomarkers

J. Quanico , J. Franck , J. Gimeno , R. Sabbagh , M. Salzet et al.
Chemical Communications, 2015, 51 (22), pp.4564-4567. ⟨10.1039/C4CC08331H⟩
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Inter- and intra-organ spatial distributions of sea star saponins by MALDI imaging

Marie Demeyer , Maxence Wisztorski , Corentin Decroo , Julien de Winter , Guillaume Caulier et al.
Analytical and Bioanalytical Chemistry, 2015, 407 (29), pp.8813-8824. ⟨10.1007/s00216-015-9044-0⟩
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Substrate-Mediated Laser Ablation under Ambient Conditions for Spatially-Resolved Tissue Proteomics

Benoit Fatou , Maxence Wisztorski , Cristian Focsa , Michel Salzet , Michael Ziskind et al.
Scientific Reports, 2015, 5, pp.18135. ⟨10.1038/srep18135⟩
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Parafilm-assisted microdissection: a sampling method for mass spectrometry-based identification of differentially expressed prostate cancer protein biomarkers

J. Quanico , J. Franck , J. Gimeno , R. Sabbagh , M. Salzet et al.
Chemical Communications, 2015, 51 (22), pp.4564-4567. ⟨10.1039/c4cc08331h⟩
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Proteome-wide characterization of signalling interactions in the hippocampal CA4/DG subfield of patients with Alzheimer’s disease

Jae Ho Kim , Julien Franck , Taewook Kang , Helmut Heinsen , Rivka Ravid et al.
Scientific Reports, 2015, 5, pp.11138. ⟨10.1038/srep11138⟩
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Parafilm-assisted microdissection: a sampling method for mass spectrometry-based identification of differentially expressed prostate cancer protein biomarkers

J. Quanico , J. Franck , J. Gimeno , R. Sabbagh , M. Salzet et al.
Chemical Communications, 2015, 51 (22), pp.4564-4567. ⟨10.1039/C4CC08331H⟩
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Parafilm-assisted microdissection: a sampling method for mass spectrometry-based identification of differentially expressed prostate cancer protein biomarkers

J. Quanico , J. Franck , J. Gimeno , R. Sabbagh , Michel Salzet et al.
Chemical Communications, 2015, 51 (22), pp.4564-4567. ⟨10.1039/c4cc08331h⟩
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Reciprocal immune benefit based on complementary production of antibiotics by the leech Hirudo verbana and its gut symbiont Aeromonas veronii

Aurélie Tasiemski , François Massol , Virginie Cuvillier-Hot , Céline Boidin-Wichlacz , Emmanuel Roger et al.
Scientific Reports, 2015, 5, pp.17498. ⟨10.1038/srep17498⟩
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MALDI-MS and NanoSIMS imaging techniques to study cnidarian?dinoflagellate symbioses

C. Kopp , M. Wisztorski , J. Revel , M. Mehiri , V. Dani et al.
Zoology, 2015, 118 (2), pp.125 - 131. ⟨10.1016/j.zool.2014.06.006⟩
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Delivery of Alginate Scaffold Releasing Two Trophic Factors for Spinal Cord Injury Repair

I. Grulova , L. Slovinska , J. Blaško , S. Devaux , M. Wisztorski et al.
Scientific Reports, 2015, 5, pp.13702. ⟨10.1038/srep13702⟩
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Alterations of protein composition along the rostro-caudal axis after spinal cord injury: proteomic, in vitro and in vivo analyses

Dasa Cizkova , Julien Franck , Lucia Slovinska , Ivana Grulova , Christophe Lefebvre et al.
Frontiers in Cellular Neuroscience, 2014, 8, ⟨10.3389/fncel.2014.00105⟩
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On the origin of increased sensitivity and mass resolution using silicon masks in MALDI

Laurent Diologent , Julien Franck , Maxence Wisztorski , A. Treizebre , Cristian Focsa et al.
Analytical Chemistry, 2014, 86, pp.1404-1413. ⟨10.1021/ac401329r⟩
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Modulation properties of factors released by bone marrow stromal cells on activated microglia: an in vitro study

Dasa Cizkova , Stéphanie Devaux , Françoise Le Marrec-Croq , Julien Franck , Lucia Slovinska et al.
Scientific Reports, 2014, 4 (1), pp.7514. ⟨10.1038/srep07514⟩
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Human temporal lobe epilepsy analyses by tissue proteomics

Céline Mériaux , Julien Franck , Dan Bi Park , Jusal Quanico , Young Hye Kim et al.
Hippocampus, 2014, 24 (6), pp.628-642. ⟨10.1002/hipo.22246⟩
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Development of liquid microjunction extraction strategy for improving protein identification from tissue sections

Jusal Quanico , Julien Franck , Claire Dauly , Kerstin Strupat , Jocelyn Dupuy et al.
Journal of Proteomics, 2013, 79, pp.200-218. ⟨10.1016/j.jprot.2012.11.025⟩
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Microproteomics by liquid extraction surface analysis: Application to FFPE tissue to study the fimbria region of tubo‐ovarian cancer

Maxence Wisztorski , Benoit Fatou , Julien Franck , Annie Desmons , Isabelle Farré et al.
PROTEOMICS - Clinical Applications, 2013, 7 (3-4), pp.234-240. ⟨10.1002/prca.201200070⟩
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Ionic matrices pre-spotted matrix-assisted laser desorption/ionization plates for patient maker following in course of treatment, drug titration, and MALDI mass spectrometry imaging

David Bonnel , Julien Franck , Céline Mériaux , Michel Salzet , Isabelle Fournier
Analytical Biochemistry, 2013, 434 (1), pp.187-198. ⟨10.1016/j.ab.2012.10.035⟩
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Quantification-Based Mass Spectrometry Imaging of Proteins by Parafilm Assisted Microdissection

Julien Franck , Jusal Quanico , Maxence Wisztorski , Robert Day , Michel Salzet et al.
Analytical Chemistry, 2013, 85 (17), pp.8127-8134. ⟨10.1021/ac4009397⟩
Article dans une revue hal-04455753 v1

A new safety concern for glaucoma treatment demonstrated by mass spectrometry imaging of benzalkonium chloride distribution in the eye, an experimental study in rabbits

F. Brignole-Baudouin , N. Desbenoit , G. Hamm , H. Liang , J. P. Both et al.
PLoS ONE, 2012, 7 (11), pp.e50180. ⟨10.1371/journal.pone.0050180⟩
Article dans une revue hal-00764054 v1

TARGETED MASS spectrometry Imaging: Specific Targeting Mass Spectrometry imaging technologies from history to perspective

Hugo Gagnon , Julien Franck , Maxence Wisztorski , Robert Day , Isabelle Fournier et al.
Progress in Histochemistry and Cytochemistry, 2012, 47 (3), pp.133-174. ⟨10.1016/j.proghi.2012.08.002⟩
Article dans une revue istex hal-04455827 v1

Multiple Changes in Peptide and Lipid Expression Associated with Regeneration in the Nervous System of the Medicinal Leech

C. Meriaux , K. Arafah , A. Tasiemski , M. Wisztorski , J. Bruand et al.
PLoS ONE, 2011, 6 (4), pp.1-20. ⟨10.1371/journal.pone.0018359⟩
Article dans une revue hal-00589141 v1

Multivariate analyses for biomarkers hunting and validation through on-tissue bottom-up or in-source decay in MALDI-MSI: application to prostate cancer

David Bonnel , Rémi Longuespee , Julien Franck , Morad Roudbaraki , Pierre Gosset et al.
Analytical and Bioanalytical Chemistry, 2011, 401 (1), pp.149-165. ⟨10.1007/s00216-011-5020-5⟩
Article dans une revue hal-04455842 v1

MALDI mass spectrometry imaging of proteins exceeding 30,000 daltons.

Julien Franck , Rémi Longuespée , Maxence Wisztorski , Alexandra van Remoortere , René van Zeijl et al.
Medical Science Monitor, 2010, 16 (9), pp.BR293-9
Article dans une revue hal-04456014 v1

On-tissue protein identification and imaging by MALDI-Ion mobility mass spectrometry

Jonathan Stauber , Luke Macaleese , Julien Franck , Emmanuelle Claude , Marten Snel et al.
Journal of The American Society for Mass Spectrometry, 2010, 21 (3), pp.338-347. ⟨10.1016/j.jasms.2009.09.016⟩
Article dans une revue hal-04456026 v1

Liquid ionic matrixes for MALDI mass spectrometry imaging of lipids

Céline Meriaux , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier
Journal of Proteomics, 2010, 73 (6), pp.1204-1218. ⟨10.1016/j.jprot.2010.02.010⟩
Article dans une revue istex hal-04456017 v1

MALDI imaging mass spectrometry in ovarian cancer for tracking, identifying, and validating biomarkers.

Mohamed El Ayed , David Bonnel , Remi Longuespée , Céline Castelier , Julien Franck et al.
Medical Science Monitor, 2010, 16 (8), pp.BR233-45
Article dans une revue hal-04456012 v1

MALDI imaging and profiling MS of higher mass proteins from tissue

Alexandra Van Remoortere , René van Zeijl , Nico van den Oever , Julien Franck , Rémi Longuespée et al.
Journal of The American Society for Mass Spectrometry, 2010, 21 (11), pp.1922-1929. ⟨10.1016/j.jasms.2010.07.011⟩
Article dans une revue hal-04456009 v1

On-Tissue N-Terminal Peptide Derivatizations for Enhancing Protein Identification in MALDI Mass Spectrometric Imaging Strategies

J. Franck , M. El Ayed , M. Wisztorski , M. Salzet , I. Fournier
Analytical Chemistry, 2009, 81 (20), pp.8305-8317. ⟨10.1021/ac901043n⟩
Article dans une revue hal-04456028 v1

MALDI imaging mass spectrometry: state of the art technology in clinical proteomics

Julien Franck , Karim Arafah , Mohamed Elayed , David Bonnel , Daniele Vergara et al.
Molecular and Cellular Proteomics, 2009, 8 (9), pp.2023-2033. ⟨10.1074/mcp.R800016-MCP200⟩
Article dans une revue hal-04456037 v1

Improving Tissue Preparation for Matrix-Assisted Laser Desorption Ionization Mass Spectrometry Imaging. Part 1: Using Microspotting

Julien Franck , Karim Arafah , Alan Barnes , Maxence Wisztorski , Michel Salzet et al.
Analytical Chemistry, 2009, 81 (19), pp.8193-8202. ⟨10.1021/ac901328p⟩
Article dans une revue hal-04456031 v1

Tissue imaging using MALDI-MS: a new frontier of histopathology proteomics.

Isabelle Fournier , Maxence Wisztorski , Michel Salzet
Expert Review of Proteomics, 2008, 5 (3), pp.413-24. ⟨10.1586/14789450.5.3.413⟩
Article dans une revue hal-00350102 v1

MALDI imaging of formalin-fixed paraffin-embedded tissues: application to model animals of Parkinson disease for biomarker hunting.

J. Stauber , R. Lemaire , J. Franck , D. Bonnel , D. Croix et al.
Journal of Proteome Research, 2008, 7 (3), pp.969-78. ⟨10.1021/pr070464x⟩
Article dans une revue hal-00350106 v1

Molecular MALDI imaging: an emerging technology for neuroscience studies.

Maxence Wisztorski , Dominique Croix , Eduardo Macagno , Isabelle Fournier , Michel Salzet
Developmental Neurobiology, 2008, 68 (6), pp.845-58. ⟨10.1002/dneu.20623⟩
Article dans une revue hal-00350103 v1

MITICS (MALDI Imaging Team Imaging Computing System): a new open source mass spectrometry imaging software.

Olivia Jardin-Mathé , David Bonnel , Julien Franck , Maxence Wisztorski , Eduardo Macagno et al.
Journal of Proteomics, 2008, 71 (3), pp.332-45. ⟨10.1016/j.jprot.2008.07.004⟩
Article dans une revue istex hal-00350101 v1
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MALDI Imaging of Formalin-Fixed Paraffin-Embedded Tissues: Application to Model Animals of Parkinson Disease for Biomarker Hunting.

J. Stauber , R. Lemaire , M. Wisztorski , Julien Franck , Bonnel David et al.
Journal of Proteome Research, 2008, 7 (7), pp.969-978
Article dans une revue hal-00268379 v1
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Molecular profiling of matrix coated and native tissue sections by UV and IR MALDI-O-TOF-MS.

Klaus Dreisewerd , R. Lemaire , G. Pohlentz , M. Salzet , M. Wisztorski et al.
Analytical Chemistry, 2007, 79 (6), pp.2463 -2471. ⟨10.1021/ac061768q⟩
Article dans une revue hal-00086947 v1
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Direct Analysis and MALDI Imaging of Formalin-Fixed, Paraffin-Embedded Tissue Sections

R. Lemaire , A. Desmons , J. C. Tabet , R. Day , M. Salzet et al.
J. Proteome Res., 2007, 6 (4), pp.1295 -1305. ⟨10.1021/pr060549i⟩
Article dans une revue hal-00167250 v1
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MALDI imaging: a new technology to discover and validate new biomarkers

M. Wisztorski , R. Lemaire , J. Stauber , S. Ait-Menguellet , O. Jardin-Mathé et al.
Médecine/Sciences, 2007, 23 (1), pp.31-36
Article dans une revue hal-00086943 v1
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Tag-mass: Specific molecular imaging of transcriptome and proteome by mass spectrometry based on photocleavable tag

R. Lemaire , J. Stauber , M. Wisztorski , C. van Camp , A. Desmons et al.
Journal of Proteome Research, 2007, 6 (6), pp.2057-2067. ⟨10.1021/pr0700044⟩
Article dans une revue hal-00167235 v1

Solid ionic matrixes for direct tissue analysis & MALDI imaging.

R. Lemaire , J.-C. Tabet , P. Ducoroy , J. Hendra , M. Salzet et al.
Analytical Chemistry, 2006, 78, pp.809-819
Article dans une revue hal-00120848 v1
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Lipopolysaccharide mediated regulation of neuroendocrine associated proprotein convertases and neuropeptide precursor processing in the rat spleen.

G. Lansac , W. Dong , Cm Dubois , N. Benlarbi , C. Afonso et al.
Journal of Neuroimmunology, 2006, 171 (2), pp.57-71. ⟨10.1016/jneuroim.2005.09.019⟩
Article dans une revue hal-00086906 v1
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Solid ionic matrices for direct tissue analysis and MALDI imaging.

R. Lemaire , J. C. Tabet , P. Ducoroy , J. B. Hendra , M. Salzet et al.
Analytical Chemistry, 2006, 78 (3), pp.809 -819. ⟨10.1021/ac0514669⟩
Article dans une revue hal-00086905 v1

Direct profiling and MALDI Imaging in clinical proteomic

J. Stauber , R. Lemaire , M. Wisztorski , S. Ait-Menguellet , J. P. Lucot et al.
Molecular and Cellular Proteomics, 2006, 5 (10), pp.S247-S247
Article dans une revue hal-00086942 v1
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MALDI-MS Direct Tissue Analysis of Proteins: Improving Signal Sensitivity Using Organic Treatments

R. Lemaire , M. Wisztorski , A. Desmons , J. C. Tabet , R. Day et al.
Analytical Chemistry, 2006, 78 (20), pp.7145 -7153. ⟨10.1021/ac060565z⟩
Article dans une revue hal-00086901 v1
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Direct Analyses of neuropeptides by in situ MALDI-TOF mass spectrometry in the rat brain

I. Fournier , R. Day , M. Salzet
Neuroendocrinology Letters, 2003, 1 (24), pp.9-14
Article dans une revue hal-00167329 v1
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Optical Servoing of Soft Robotic Instrument for Cancer Imaging

Paul Chaillou , Jialei Shi , Alexandre Kruszewski , Isabelle Fournier , Helge Wurdemann et al.
ICRA@40, Sep 2024, Rotterdam, Netherlands
Communication dans un congrès hal-04714460 v1

The Colibactin-Producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance.

Nilmara de Oliveira Alves , Guillaume Dalmasso , Darja Nikitina , Amaury Vaysse , Richard Ruez et al.
41 ème CECED, Mar 2024, Monptellier, France
Communication dans un congrès hal-04543437 v1
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Reduced finite element modelling and closed-loop control of pneumatic-driven soft continuum robots

Paul Chaillou , Jialei Shi , Alexandre Kruszewski , Isabelle Fournier , Helge Wurdemann et al.
2023 IEEE International Conference on Soft Robotics (RoboSoft), Apr 2023, Singapore, France. pp.1-8, ⟨10.1109/RoboSoft55895.2023.10122081⟩
Communication dans un congrès hal-04101252 v1

Real-Time Molecular Diagnosis of Tumors Using Atmospheric Pressure Infrared Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry

P Saudemont , J Quanico , A. Baud , B Fatou , D Tierny et al.
15th International Conference on Laser Ablation, Sep 2019, Maui, United States
Communication dans un congrès hal-02407005 v1

Abstract 367: Trop-2 activates a dormant Na + /K + -ATPase/PKCα/CD9/ezrin signaling axis to override the basal growth program of cancer cells

Marco Trerotola , Valeria Relli , Romina Tripaldi , Andrea Sacchetti , Kristina Havas et al.
Proceedings: AACR Annual Meeting 2017; April 1-5, 2017; Washington, DC, Jul 2017, Paris, France. pp.367-367, ⟨10.1158/1538-7445.AM2017-367⟩
Communication dans un congrès inserm-02940617 v1

MALDI DIRECT ANALYSIS AND IMAGING OF FROZEN VERSUS FFPE TISSUES: WHAT STRATEGY FOR WHICH SAMPLE?

R. Lemaire , J. Stauber , M. Wisztorski , O. Jardin-Mathé , M. Salzet et al.
55th ASMS, Jun 2007, Indianapolis, United States. pp.0
Communication dans un congrès hal-00167284 v1
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Enhanced spatial resolution of MALDI images using silicon masks

Nicolas Verplanck , Maxence Wisztorski , Jonathan Stauber , J.C. Camart , Michel Salzet et al.
11th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2007, 2007, Paris, France. pp.41-43
Communication dans un congrès hal-00284454 v1

Nanostructured surface as EWOOD counter electrode for matrix-free mass spectrometry analysis

B. Salhi , Yannick Coffinier , N. Verplanck , M. Wisztorski , G. Piret et al.
Trends in Nanotechnology, 2006, Grenoble, France
Communication dans un congrès hal-00127824 v1

MALDI imaging by using solid ionic matrixes for direct analysis of tissues.

Jean-Claude Tabet , Rémy Lemaire , P. Ducoroy , J.B Hendra , A. Desmons et al.
3rd International Conference “Genomics, Proteomics, Bioinformatics, and Nanotechnologies for Medicine”, Jul 2006, NOVOSIBIRSK, Russia
Communication dans un congrès hal-00104882 v1

DIRECT PROFILING AND MALDI IMAGING OF TISSUES: NEW DEVELOPMENTS AND CLINICAL APPLICATIONS FOR OVARIAN CANCER

S. Ait-Menguellet , I. Fournier , R. Lemaire , J. P. Lucot , D. Vinatier et al.
Clinical Proteomics in Oncology, 2006, Dijon, France. pp.10
Communication dans un congrès hal-00167326 v1

Vers une imagerie par spectrométrie de masse clinique à haut débit

M. Wisztorski , R. Lemaire , O. Jardin-Mathe , C. Courcelle , V. Thomy et al.
Journée Innovations en Protéomique, 1ères rencontres du MASTER Protéomique de Lille, 2005, Villeneuve d Ascq, France
Communication dans un congrès hal-00126223 v1

L'imagerie par spectrométrie de masse MALDITOF

M. Wisztorski , O. Jardin-Mathe , V. Thomy , R. Lemaire , P. Ducoroy et al.
Journée André Verbert, 2005, Lille, France
Communication dans un congrès hal-00126224 v1

NOUVEAUX DEVELOPPEMENTS POUR L'IMAGERIE MALDI :VERS L'IMAGERIE CLINIQUE A HAUT DEBIT

P. Ducoroy , I. Fournier , R. Lemaire , M. Salzet , Jc. Tabet et al.
1er SCBA - 22èmes Journées Françaises de Spectrométrie de Masse, Sep 2005, France. pp.0
Communication dans un congrès hal-00167327 v1

L'imagerie par spectrométrie de masse MALDITOF : innovations et perspectives

M. Wisztorski , O. Jardin-Mathe , V. Thomy , R. Lemaire , P. Ducoroy et al.
Proceedings of the 1st Symposium of Analytical Chemistry and Biology : from molecule to proteome, 2005, Montpellier, France
Communication dans un congrès hal-00131330 v1

Analyse directe de neuropeptides dans le cerveau de rat par spectrométrie de masse MALDI-TOF In Situ

R. Day , I. Fournier , M. Salzet
Societé Française de Spectrométrie de masse, club jeune, 2002, Chaville, France. pp.0
Communication dans un congrès hal-00167328 v1

Spatial metabolomics reveals a reprogramming of lipid metabolism by bacterial colibactin supporting immunosuppressive microenvironment in right-sided colon cancer

Nilmara de Oliveira Alves , Olivier Boulard , Amaury Vaysse , Guillaume Dalmasso , Darja Nikitina et al.
5 Metabolism & Cancer, Nov 2023, Nice, France
Poster de conférence hal-04543485 v1

Résolution structural 3D et ciblage thérapeutique du complexe oncogénique MUC4-ErbB2 dans le cancer du pancréas.

Nicolas Stoup , Maxime Liberelle , Julien Franck , Nicolas Renault , Patricia Melnyk et al.
14èmes Journées Scientifiques Annuelles du Cancéropole Nord-Ouest (CNO), May 2022, Deauville, France
Poster de conférence hal-04547404 v1

Neuronal adenosine A2A receptor overexpression exacerbates memory deficits and synaptic loss in an amyloidogenic mouse model of Alzheimer’s disease

D. Blum , V. Gomez-Murcia , V. K. Carvalho , C. Montmasson , Ac. Meriaux et al.
FENS, Jul 2022, PARIS, France
Poster de conférence hal-03974166 v1

Neuronal upregulation of adenosine a2a receptors exacerbates memory deficits in mouse models of alzheimer's disease

David Blum , K. Gomez-Murcia , Carvalho K. , M. Dumoulin , Faivre E. et al.
AD/PD virtual meeting, Sep 2021, virtual meeting, France
Poster de conférence hal-03974273 v1

Micro-Sampling of Biological Tissue by Substrate-Mediated Laser Ablation: Toward Spatially-Resolved Proteomics at µm Scale

T Maulouet , B Fatou , M. Salzet , I. Fournier , C. Focsa et al.
15th International Conference on Laser Ablation, Sep 2019, Maui, United States
Poster de conférence hal-02406998 v1

Ambient Mass Spectrometry Imaging by Water-Assisted Laser Desorption/Ionization for Ex Vivo and in Vivo Applications.

Nina Ogrinc , Paul Chaillou , Alexandre Kruszewski , Christian Duriez , Michel Salzet et al.
Methods in Molecular Biology, 2688, Springer, pp.83-94, 2023, ⟨10.1007/978-1-0716-3319-9_8⟩
Chapitre d'ouvrage hal-04400799 v1

MALDI Mass Spectrometry Imaging and Spatially-resolved Proteomics

E. Chicano-Galvez , Michel Salzet , Isabelle Fournier , E Chicano-Galvez
MALDI Mass Spectrometry Imaging: From Fundamentals to Spatial Omics, Royal Society of Chemistry, 2021, 978-1-83916-241-1. ⟨10.1039/9781839165191⟩
Chapitre d'ouvrage hal-04552159 v1

Combined MALDI Mass Spectrometry Imaging and Parafilm-Assisted Microdissection-Based LC-MS/MS Workflows in the Study of the Brain

Jusal Quanico , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier
Combined MALDI Mass Spectrometry Imaging and Parafilm-Assisted Microdissection-Based LC-MS/MS Workflows in the Study of the Brain, 1598, pp.269-283, 2017, ⟨10.1007/978-1-4939-6952-4_13⟩
Chapitre d'ouvrage inserm-02940633 v1

Droplet-Based Liquid Extraction for Spatially-Resolved Microproteomics Analysis of Tissue Sections

Maxence Wisztorski , Jusal Quanico , Julien Franck , Benoit Fatou , Michel Salzet et al.
Droplet-Based Liquid Extraction for Spatially-Resolved Microproteomics Analysis of Tissue Sections, pp.49-63, 2017, ⟨10.1007/978-1-4939-7051-3_6⟩
Chapitre d'ouvrage inserm-02940613 v1

Progress and Potential of Imaging Mass Spectrometry Applied to Biomarker Discovery

Jusal Quanico , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier
Progress and potential of imaging mass spectrometry applied to biomarker discovery, pp.21-43, 2017, ⟨10.1007/978-1-4939-6952-4_2⟩
Chapitre d'ouvrage inserm-02940629 v1
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Développements en Imagerie par Spectrométrie de Masse MALDI et Applications aux Problématiques Biologiques

I. Fournier
Sciences pharmaceutiques. Université des Sciences et Technologie de Lille - Lille I, 2005
HDR tel-00167305 v1