jean-francois mangin

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Ultra-high resolution multimodal MRI densely labelled holistic structural brain atlas

José V Manjón , Sergio Morell-Ortega , Marina Ruiz-Perez , Boris Mansencal , Edern Le Bot et al.

Scientific Reports, 2026, 16 (1), pp.9457. ⟨10.1038/s41598-026-40186-2⟩

Article dans une revue hal-05560922v1
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Decoding cortical folding with deep learning: toward neurodevelopmental biomarkers of psychiatric disorders

Pierre Auriau , Antoine Grigis , Jean-François Mangin , Joël Chavas , Julien Laval et al.

Journal of Neural Transmission, 2026, ⟨10.1007/s00702-026-03105-3⟩

Article dans une revue (data paper) hal-05500148v1
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On the typical development of the central sulcus in infancy: A longitudinal evaluation of its morphology and link to behaviour

Amaia Dornier , Alexia Gérard , Yann Leprince , Lucie Hertz-Pannier , Jean-François Mangin et al.

Developmental Neuroscience, 2025, pp.1-20. ⟨10.1159/000546958⟩

Article dans une revue hal-05283047v1

The influence of closed sutures on cranial morphology in Apert and Crouzon syndromes: A quantitative analysis

Ombline Delassus , Lyza Ben Bouazza , Adèle Rohée Traoré , Mathieu Uguen , Nathalie Boddaert et al.

Journal of Anatomy, 2025, 248 (1), pp.40-52. ⟨10.1111/joa.70013⟩

Article dans une revue hal-05593442v1
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Pattern of Deep Grey Matter Undersizing Boosts MRI ‐Based Diagnostic Classifiers in Fetal Alcohol Spectrum Disorders

Eliot Kerdreux , Justine Fraize , Alexandra Ntorkou , Pauline Garzón , Richard Delorme et al.

Human Brain Mapping, 2025, 46 (8), pp.e70233. ⟨10.1002/hbm.70233⟩

Article dans une revue hal-05593481v1

A self-supervised learning framework for discovering cortical folding patterns under genetic influence: Application to the Anterior Cingulate Cortex

Antoine Dufournet , Julien Laval , Denis Rivière , Héloïse de Vareilles , Graham Murray et al.

Imaging Neuroscience, 2025, 3, ⟨10.1162/IMAG.a.987⟩

Article dans une revue hal-05379993v1
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Pattern of Deep Grey Matter Undersizing Boosts MRI ‐Based Diagnostic Classifiers in Fetal Alcohol Spectrum Disorders

Eliot Kerdreux , Justine Fraize , Alexandra Ntorkou , Pauline Garzón , Richard Delorme et al.

Human Brain Mapping, 2025, 46 (8), pp.e70233. ⟨10.1002/hbm.70233⟩

Article dans une revue hal-05075733v1

Cognitive Stability Among Plasma p-tau 181 Negative Individuals: A 5-year Analysis of the Multidomain Alzheimer Prevention Trial Study

Federico Bellelli , Philipe Barreto de Souto , Christelle Cantet , Pierre-Jean Ousset , Kaj Blennow et al.

Journals of Gerontology Series A: Biological Sciences and Medical Sciences, 2025, 80 (7), pp.glaf113. ⟨10.1093/gerona/glaf113⟩

Article dans une revue hal-05483622v1
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Faster decline of very prodromal dementia with Lewy bodies when amyloid positive

Frédéric Blanc , Vincent Bouteloup , Claire Paquet , Marie Chupin , Florence Pasquier et al.

Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring, 2025, 17 (2), pp.e70141. ⟨10.1002/dad2.70141⟩

Article dans une revue hal-05163449v1
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Comparative analysis of the chimpanzee and human brain superficial structural connectivities

Maëlig Chauvel , Marco Pascucci , Ivy Uszynski , Bastien Herlin , Jean-François Mangin et al.

Brain Structure and Function, 2024, 229 (8), pp.1943-1977. ⟨10.1007/s00429-024-02823-2⟩

Article dans une revue hal-04893305v1
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A framework to improve the alignment of individual cytoarchitectonic maps of the Julich-Brain atlas using cortical folding landmarks

Xiaoyu Wang , Yann Leprince , Jessica Lebenberg , Clement Langlet , Hartmut Mohlberg et al.

Cerebral Cortex, 2024, pp.bhad538. ⟨10.1093/cercor/bhad538⟩

Article dans une revue hal-04406987v1
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Grey-matter structure markers of Alzheimer's disease, Alzheimer's conversion, functioning and cognition: a metaanalysis across 11 cohorts

Baptiste Couvy-Duchesne , Vincent Frouin , Vincent Bouteloup , Nikitas Koussis , Julia Sidorenko et al.

Human Brain Mapping, In press, 46 (2), ⟨10.1002/hbm.70089⟩

Article dans une revue hal-04815478v1

The pattern of cortical thickness associated with executive dysfunction in MCI and SCC: The MEMENTO cohort

D. Andriuta , M. Roussel , Genevieve Chene , C. Fischer , J.-F. Mangin et al.

Revue Neurologique, 2024, 180 (10), pp.1100-1107. ⟨10.1016/j.neurol.2024.02.394⟩

Article dans une revue hal-04610607v1
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Exploring the potential of representation and transfer learning for anatomical neuroimaging: application to psychiatry

Benoit Dufumier , Pietro Gori , Sara Petiton , Robin Louiset , Jean-François Mangin et al.

NeuroImage, 2024

Article dans une revue hal-04436585v1

In vivo mapping of the deep and superficial white matter connectivity in the chimpanzee brain

Maëlig Chauvel , Ivy Uszynski , Bastien Herlin , Alexandros Popov , Yann Leprince et al.

NeuroImage, 2023, 282, pp.120362. ⟨10.1016/j.neuroimage.2023.120362⟩

Article dans une revue hal-04893342v1
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Browsing Multiple Subjects When the Atlas Adaptation Cannot Be Achieved via a Warping Strategy

Denis Rivière , Yann Leprince , Nicole Labra , Nabil Vindas , Ophelie Foubet et al.

Frontiers in Neuroinformatics, 2022, 16, pp.803934. ⟨10.3389/fninf.2022.803934⟩

Article dans une revue hal-03830591v1
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Prodromal characteristics of dementia with Lewy bodies: baseline results of the MEMENTO memory clinics nationwide cohort

Frédéric Blanc , Vincent Bouteloup , Claire Paquet , Marie Chupin , Florence Pasquier et al.

Alzheimer's Research and Therapy, 2022, 14 (1), pp.96. ⟨10.1186/s13195-022-01037-0⟩

Article dans une revue hal-03769651v1
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Sulcal morphology as cognitive decline predictor in older adults with memory complaints

Marion Mortamais , Laure-Anne Gutierrez , Marianne Balem , Emmanuelle Le Bars , Nicolas Menjot de Champfleur et al.

Neurobiology of Aging, 2022, 113, pp.84-94. ⟨10.1016/j.neurobiolaging.2022.02.003⟩

Article dans une revue hal-04472823v1
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Association of APOE ε4 with cerebral gray matter volumes in non-demented older adults: the MEMENTO cohort study

Melina Regy , Aline Dugravot , Severine Sabia , Aurore Fayosse , Jean-Francois Mangin et al. Article dans une revue hal-03606321v1

Lithium prevents grey matter atrophy in patients with bipolar disorder: an international multicenter study

Franz Hozer , Samuel Sarrazin , Charles Laidi , Pauline Favre , Melissa Pauling et al.

Psychological Medicine, 2021, 51 (7), pp.1201-1210. ⟨10.1017/S0033291719004112⟩

Article dans une revue hal-02876160v1
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Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism

Isaac Goicovich , Paulo Olivares , Claudio Román , Andrea Vázquez , Cyril Poupon et al.

Frontiers in Neuroinformatics, 2021, 15, ⟨10.3389/fninf.2021.727859⟩

Article dans une revue hal-03508604v1
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Diabetes mellitus and cognition

Eric Frison , Cecile Proust-Lima , Jean-Francois Mangin , Marie-Odile Habert , Stephanie Bombois et al.

Neurology, 2021, 97 (8), pp.e836-e848. ⟨10.1212/WNL.0000000000012440⟩

Article dans une revue hal-03278377v1
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Consensus-based guidance for conducting and reporting multi-analyst studies

Balazs Aczel , Barnabas Szaszi , Gustav Nilsonne , Olmo van den Akker , Casper Albers et al.

eLife, 2021, 10, pp.e72185. ⟨10.7554/eLife.72185⟩

Article dans une revue inserm-03431812v1
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What Are the Synergies between Paleoanthropology and Brain Imaging?

Antoine Balzeau , Jean-François Mangin

Symmetry, 2021, 13, ⟨10.3390/sym13101974⟩

Article dans une revue hal-03508610v1

Prospective Associations Between Diffusion Tensor Imaging Parameters and Frailty in Older Adults

Mathieu Maltais , Philipe de Souto Barreto , Lisa Perus , Jean-François Mangin , Antoine Grigis et al.

Journal of the American Geriatrics Society, 2020, 68 (5), pp.1050-1055. ⟨10.1111/jgs.16343⟩

Article dans une revue hal-02901933v1
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Superficial white matter: A review on the dMRI analysis methods and applications

Miguel Guevara , Pamela Guevara , Claudio Román , Jean-François Mangin

NeuroImage, 2020, 212, pp.116673. ⟨10.1016/j.neuroimage.2020.116673⟩

Article dans une revue hal-02517336v1
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Neocortical morphometry in Huntington's disease: Indication of the coexistence of abnormal neurodevelopmental and neurodegenerative processes

Jean-François Mangin , Denis Rivière , Edouard Duchesnay , Yann Cointepas , Véronique Gaura et al.

Neuroimage-Clinical, 2020, 26, pp.102211. ⟨10.1016/j.nicl.2020.102211⟩

Article dans une revue hal-02521738v1
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From Coarse to Fine-Grained Parcellation of the Cortical Surface Using a Fiber-Bundle Atlas

Narciso López-López , Andrea Vázquez , Josselin Houenou , Cyril Poupon , Jean-François Mangin et al.

Frontiers in Neuroinformatics, 2020, 14, ⟨10.3389/fninf.2020.00032⟩

Article dans une revue hal-03071615v1

Neuroimaging Evidence for Increased Neurite Density in Patients Taking Lithium: A Replication Study

Samuel Sarrazin , Cyril Poupon , Ivy Uszynski , Achille Teillac , Jean-François Mangin et al.

Psychotherapy and Psychosomatics, 2020, pp.1-2. ⟨10.1159/000507556⟩

Article dans une revue hal-02876161v1
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The reliability and heritability of cortical folds and their genetic correlations across hemispheres

Fabrizio Pizzagalli , Guillaume Auzias , Qifan Yang , Samuel Mathias , Joshua Faskowitz et al.

Communications Biology, 2020, 3 (1), ⟨10.1038/s42003-020-01163-1⟩

Article dans une revue hal-03026964v1
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Automatic labeling of cortical sulci using patch- or CNN-based segmentation techniques combined with bottom-up geometric constraints

Léonie Borne , Denis Rivière , Martial Mancip , Jean-François Mangin

Medical Image Analysis, 2020, 62, pp.101651. ⟨10.1016/j.media.2020.101651⟩

Article dans une revue hal-02517321v1
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Subjective cognitive and non‐cognitive complaints and brain MRI biomarkers in the MEMENTO cohort

Virginie Dauphinot , Vincent Bouteloup , Jean-François Mangin , Bruno Vellas , Florence Pasquier et al.

Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring, 2020, 12 (1), pp.e12051. ⟨10.1002/dad2.12051⟩

Article dans une revue hal-02975611v1
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FFClust: Fast fiber clustering for large tractography datasets for a detailed study of brain connectivity

Andrea Vázquez , Narciso López-López , Alexis Sánchez , Josselin Houenou , Cyril Poupon et al.

NeuroImage, 2020, 220, pp.117070. ⟨10.1016/j.neuroimage.2020.117070⟩

Article dans une revue hal-03071609v1

Prospective associations between physical activity levels and white matter integrity in older adults: results from the MAPT study

Mathieu Maltais , Yves Rolland , Katherine Boisvert-Vigneault , Lisa Perus , Jean-François Mangin et al.

Maturitas, 2020, 137, pp.24-29. ⟨10.1016/j.maturitas.2020.04.012⟩

Article dans une revue hal-02876159v1
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Automatic group-wise whole-brain short association fiber bundle labeling based on clustering and cortical surface information

Andrea Vázquez , Narciso López-López , Josselin Houenou , Cyril Poupon , Jean-François Mangin et al.

BioMedical Engineering OnLine, 2020, 19 (1), ⟨10.1186/s12938-020-00786-z⟩

Article dans une revue hal-03071604v1
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The dynamics of cortical folding waves and prematurity-related deviations revealed by spatial and spectral analysis of gyrification

Jessica Dubois , Julien Lefèvre , Hugo Angleys , François Leroy , Clara Fischer et al.

NeuroImage, 2019, 185, pp.934-946. ⟨10.1016/j.neuroimage.2018.03.005⟩

Article dans une revue hal-01781242v1
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Alteration of the Cortex Shape as a Proxy of White Matter Swelling in Severe Cerebral Small Vessel Disease

Francois de Guio , David Germanaud , Julien Lefèvre , Clara Fischer , Jean-François Mangin et al.

Frontiers in Neurology, 2019, 10, ⟨10.3389/fneur.2019.00753⟩

Article dans une revue hal-02192939v1
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A DACT1 enhancer modulates brain asymmetric temporal regions involved in language processing

Yann Le Guen , François Leroy , Cathy Philippe , Jean-François Mangin , Ghislaine Dehaene-Lambertz et al.

Cerebral Cortex, 2019, 30 (10), pp.5322-5332. ⟨10.1101/539189⟩

Article dans une revue hal-03064349v1
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Mapping the asynchrony of cortical maturation in the infant brain: a MRI multi-parametric clustering approach

Jessica Lebenberg , Jean-François Mangin , Bertrand Thirion , Cyril Poupon , Lucie Hertz-Pannier et al.

NeuroImage, 2019, 185, pp.641-653. ⟨10.1016/j.neuroimage.2018.07.022⟩

Article dans une revue hal-01966812v1
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Plis de passage" Deserve a Role in Models of the Cortical Folding Process

Jean-François Mangin , Yann Le Guen , Nicole Labra , Antoine Grigis , Vincent Frouin et al.

Brain Topography: a Journal of Cerebral Function and Dynamics, 2019, 32 (6), pp.1035 - 1048. ⟨10.1007/s10548-019-00734-8⟩

Article dans une revue hal-02521779v1
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Sulcal morphology in Alzheimer's disease: an effective marker of diagnosis and cognition

Maxime Bertoux , Julien Lagarde , Fabian Corlier , Lorraine Hamelin , Jean-François Mangin et al.

Neurobiology of Aging, 2019, Epub ahead of print. ⟨10.1016/j.neurobiolaging.2019.07.015⟩

Article dans une revue inserm-02266990v1
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Widespread white matter microstructural abnormalities in bipolar disorder: evidence from mega- and meta-analyses across 3033 individuals

Pauline Favre , Melissa Pauling , Jacques Stout , Franz Hozer , Samuel Sarrazin et al.

Neuropsychopharmacology, 2019, 44 (13), pp.2285 - 2293. ⟨10.1038/s41386-019-0485-6⟩

Article dans une revue hal-05223805v1

Higher in vivo Cortical Intracellular Volume Fraction Associated with Lithium Therapy in Bipolar Disorder: A Multicenter NODDI Study

Samuel Sarrazin , Cyril Poupon , Achille Teillac , Jean-François Mangin , Mircea Polosan et al.

Psychotherapy and Psychosomatics, 2019, Epub ahead of print. ⟨10.1159/000498854⟩

Article dans une revue inserm-02098022v1
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Cognitive and neuroimaging features and brain β-amyloidosis in individuals at risk of Alzheimer's disease (INSIGHT-preAD): a longitudinal observational study

Bruno Dubois , Stéphane Epelbaum , Francis Nyasse , Hovagim Bakardjian , Geoffroy Gagliardi et al.

The Lancet Neurology, 2018, 17 (4), pp.335 - 346. ⟨10.1016/S1474-4422(18)30029-2⟩

Article dans une revue hal-01777834v1

Evaluation of amyloid status in a cohort of elderly individuals with memory complaints: validation of the method of quantification and determination of positivity thresholds

Marie-Odile Habert , Hugo Bertin , Mickael Labit , Mamadou Diallo , Sullivan Marie et al.

Annals of Nuclear Medicine, 2018, 32 (2), pp.75 - 86. ⟨10.1007/s12149-017-1221-0⟩

Article dans une revue hal-01716483v1

The chaotic morphology of the left superior temporal sulcus is genetically constrained

Yann Le Guen , François Leroy , Guillaume Auzias , Denis Rivière , Antoine Grigis et al.

NeuroImage, 2018, 174, pp.297 - 307. ⟨10.1016/j.neuroimage.2018.03.046⟩

Article dans une revue hal-01784749v1
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Different Types of White Matter Hyperintensities in CADASIL

Edouard Duchesnay , Fouad Hadj Selem , François de Guio , Mathieu Dubois , Jean-François Mangin et al.

Frontiers in Neurology, 2018, 9, pp.526. ⟨10.3389/fneur.2018.00526⟩

Article dans une revue cea-01883315v1
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A validation dataset for Macaque brain MRI segmentation

Yael Balbastre , Denis Rivière , Nicolas Souedet , Clara Fischer , Anne-Sophie Herard et al.

Data in Brief, 2018, 16, pp.37-42. ⟨10.1016/j.dib.2017.11.008⟩

Article dans une revue hal-02155748v1
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Plasma amyloid levels within the Alzheimer's process and correlations with central biomarkers

Olivier Hanon , Jean-Sébastien Vidal , Sylvain Lehmann , Stéphanie Bombois , Bernadette Allinquant et al.

Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring, 2018, 14 (7), pp.858-868. ⟨10.1016/j.jalz.2018.01.004⟩

Article dans une revue hal-02533144v1

How interindividual differences in brain anatomy shape reading accuracy

Arnaud Cachia , Margot Roëll , Jean-François Mangin , Zhong Yi Sun , Antoinette Jobert et al.

Brain Structure and Function, 2018, 223 (2), pp.701-712. ⟨10.1007/s00429-017-1516-x⟩

Article dans une revue hal-02905248v1
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Three-Dimensional Probabilistic Maps of Mesial Temporal Lobe Structures in Children and Adolescents’ Brains

Antoine Bouyeure , David Germanaud , Dhaif Bekha , Victor Delattre , Julien Lefevre et al.

Frontiers in Neuroanatomy, 2018, 12, ⟨10.3389/fnana.2018.00098⟩

Article dans une revue hal-03129759v1

Primatologist: A modular segmentation pipeline for macaque brain morphometry

Yael Balbastre , Denis Rivière , Nicolas Souedet , Clara Fischer , Anne-Sophie Herard et al.

NeuroImage, 2017, 162, pp.306-321. ⟨10.1016/j.neuroimage.2017.09.007⟩

Article dans une revue hal-02155739v1

Genetic Influence on the Sulcal Pits: On the Origin of the First Cortical Folds

Yann Le Guen , Guillaume Auzias , François Leroy , Marion Noulhiane , Ghislaine Dehaene-Lambertz et al.

Cerebral Cortex, 2017, pp.1 - 12. ⟨10.1093/cercor/bhx098⟩

Article dans une revue hal-01527005v1

Are Developmental Trajectories of Cortical Folding Comparable Between Cross-sectional Datasets of Fetuses and Preterm Newborns?

Julien Lefèvre , David Germanaud , Jessica Dubois , Ines de Macedo Santos , Hugo Angleys et al.

Cerebral Cortex, 2016, 26 (7), pp.3023 - 3035. ⟨10.1093/cercor/bhv123⟩

Article dans une revue hal-01342582v1
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Cognitive and imaging markers in non-demented subjects attending a memory clinic: study design and baseline findings of the MEMENTO cohort

Carole Dufouil , Bruno Dubois , Bruno Vellas , Florence Pasquier , Frédéric Blanc et al.

Alzheimer's Research and Therapy, 2016, 9 (1), pp.67. ⟨10.1186/s13195-017-0288-0⟩

Article dans une revue inserm-01580853v2
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Prediction of 3-year clinical course in CADASIL

Eric Jouvent , Edouard Duchesnay , Foued Hadj-Selem , François de Guio , Jean-François Mangin et al.

Neurology, 2016, 87 (17), pp.1787 - 1795. ⟨10.1212/WNL.0000000000003252⟩

Article dans une revue cea-01883312v1
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CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts

Grégory Operto , Marie Chupin , Bénédicte Batrancourt , Marie-Odile Habert , Olivier Colliot et al.

Neuroinformatics, 2016, pp.1-12. ⟨10.1007/s12021-016-9295-8⟩

Article dans une revue hal-01303094v1
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Organising white matter in a brain without corpus callosum fibres

Audrey Bénézit , Lucie Hertz-Pannier , Ghislaine Dehaene-Lambertz , Karla Monzalvo , David Germanaud et al.

Cortex, 2015, 63, pp.155-171. ⟨10.1016/j.cortex.2014.08.022⟩

Article dans une revue hal-02436280v1
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Incomplete Hippocampal Inversion: A Comprehensive MRI Study of Over 2000 Subjects

Claire Cury , Roberto Toro , Fanny Cohen , Clara Fischer , Amel Mhaya et al.

Frontiers in Neuroanatomy, 2015, 9, pp.160. ⟨10.3389/fnana.2015.00160⟩

Article dans une revue hal-01251239v1

Head-to-Head Comparison of Two Popular Cortical Thickness Extraction Algorithms: A Cross-Sectional and Longitudinal Study

Alberto Redolfi , David Manset , Frederik Barkhof , Lars-Olof Wahlund , Tristan Glatard et al.

PLoS ONE, 2015, 10 (3), pp.e0117692. ⟨10.1371/journal.pone.0117692⟩

Article dans une revue hal-01373371v1

Sulcal morphology as a new imaging marker for the diagnosis of early onset Alzheimer's disease

Lorraine Hamelin , Maxime Bertoux , Michel Bottlaender , Helene Corne , Julien Lagarde et al.

Neurobiology of Aging, 2015, 36 (11), pp.2932-9. ⟨10.1016/j.neurobiolaging.2015.04.019⟩

Article dans une revue istex hal-01254276v1
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Correction strategy for diffusion-weighted images corrupted with motion: application to the DTI evaluation of infants' white matter

Jessica Dubois , Sofya Kulikova , Lucie Hertz-Pannier , Jean-François Mangin , Ghislaine Dehaene-Lambertz et al.

Magnetic Resonance Imaging, 2014, 32 (8), pp.981-992. ⟨10.1016/j.mri.2014.05.007⟩

Article dans une revue hal-02437458v1
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Evolution of the Central Sulcus Morphology in Primates

William D. Hopkins , Adrien Meguerditchian , Olivier Coulon , Stephanie Bogart , Jean-François Mangin et al.

Brain, Behavior and Evolution, 2014, 84 (1), pp.19-30. ⟨10.1159/000362431⟩

Article dans une revue hal-01432448v1
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A multicenter tractography study of deep white matter tracts in bipolar I disorder: psychotic features and interhemispheric disconnectivity.

Samuel Sarrazin , Cyril Poupon , Julia Linke , Michèle Wessa , Mary Phillips et al.

JAMA Psychiatry, 2014, 71 (4), pp.388-96. ⟨10.1001/jamapsychiatry.2013.4513⟩

Article dans une revue inserm-01056549v1

The Shape of the ACC Contributes to Cognitive Control Efficiency in Preschoolers

Arnaud Cachia , Grégoire Borst , Julie Vidal , Arlette Pineau , Clara Fischer et al.

Journal of Cognitive Neuroscience, 2014, 26 (1), pp.96-106. ⟨10.1162/jocn_a_00459⟩

Article dans une revue hal-02904853v1
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The road ahead to cure Alzheimer’s disease: development of biological markers and neuroimaging methods for prevention trials across all stages and target populations

Enrica Cavedo , Simone Lista , Zaven S Khachaturian , Paul S Aisen , Philippe Amouyel et al.

The Journal of prevention of Alzheimer's disease, 2014, 1 (3), pp.181-202. ⟨10.14283/jpad.2014.32⟩

Article dans une revue hal-01098836v1
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Mapping Cortico-Striatal Connectivity onto the Cortical Surface: A New Tractography-Based Approach to Study Huntington Disease.

Linda Marrakchi-Kacem , Christine Delmaire , Pamela Guevara , Fabrice Poupon , Sophie Lecomte et al.

PLoS ONE, 2013, 8 (2), pp.e53135. ⟨10.1371/journal.pone.0053135⟩

Article dans une revue hal-00804579v1
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Surface smoothing: a way back in early brain morphogenesis.

Julien Lefèvre , Victor Intwali , Lucie Hertz-Pannier , Petra S. Hüppi , Jean-François Mangin et al.

Med Image Comput Comput Assist Interv, 2013, 16 (Pt 1), pp.590-7. ⟨10.1007/978-3-642-40810-6⟩

Article dans une revue inserm-00944650v1

Toward global tractography.

Jean-François Mangin , Pierre Fillard , Yann Cointepas , Denis Le Bihan , Vincent Frouin et al.

NeuroImage, 2013, 80, pp.290-6. ⟨10.1016/j.neuroimage.2013.04.009⟩

Article dans une revue istex hal-00856326v1
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Larger seems twistier : Spectral Analysis of Gyrification patterns (SpAnGy) applied to adult brain size polymorphism

David Germanaud , Julien Lefèvre , Roberto Toro , Clara Fischer , Jessica Dubois et al.

NeuroImage, 2012, 63 (3), pp.1257-72. ⟨10.1016/j.neuroimage.2012.07.053⟩

Article dans une revue pasteur-01967156v1
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Role of hippocampal CA1 atrophy in memory encoding deficits in amnestic Mild Cognitive Impairment.

Marine Fouquet , Béatrice Desgranges , Renaud La Joie , Denis Rivière , Jean-François Mangin et al.

NeuroImage, 2012, 59 (4), pp.3309-15. ⟨10.1016/j.neuroimage.2011.11.036⟩

Article dans une revue inserm-00642176v1

Diffeomorphic brain registration under exhaustive sulcal constraints.

Guillaume Auzias , Olivier Colliot , Joan Alexis Glaunès , Matthieu Perrot , Jean-François Mangin et al.

IEEE Transactions on Medical Imaging, 2011, 30 (6), pp.1214-1227. ⟨10.1109/TMI.2011.2108665⟩

Article dans une revue hal-00793675v1

Multiple q-shell diffusion propagator imaging

Maxime Descoteaux , Rachid Deriche , Denis Lebihan , Jean-François Mangin , Cyril Poupon

Medical Image Analysis, 2011, 15 (4), pp.603-621. ⟨10.1016/j.media.2010.07.001⟩

Article dans une revue istex hal-00531473v1
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Quantitative evaluation of 10 tractography algorithms on a realistic diffusion MR phantom.

Pierre Fillard , Maxime Descoteaux , Alvina Goh , Sylvain Gouttard , Ben Jeurissen et al.

NeuroImage, 2011, 56 (1), pp.220-34. ⟨10.1016/j.neuroimage.2011.01.032⟩

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Inference of a HARDI fiber bundle atlas using a two-level clustering strategy.

Pamela Guevara , Cyril Poupon , Denis Rivière , Yann Cointepas , Linda Marrakchi et al.

Medical image computing and computer-assisted intervention : MICCAI .. International Conference on Medical Image Computing and Computer-Assisted Intervention, 2010, 13 (Pt 1), pp.550-7

Article dans une revue inria-00541944v1

Joint Bayesian cortical sulci recognition and spatial normalization.

Matthieu Perrot , Denis Rivière , Alan Tucholka , Jean-François Mangin

Information processing in medical imaging : proceedings of the .. conference., 2009, 21, pp.176-87

Article dans une revue hal-00776670v1
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Cortical folding in patients with bipolar disorder or unipolar depression.

Jani Penttilä , Marie-Laure Paillère-Martinot , Jean-Luc Martinot , Damien Ringuenet , Michèle Wessa et al.

Journal of Psychiatry and Neuroscience, 2009, 34 (2), pp.127-35

Article dans une revue inserm-00390374v1

A novel global tractography algorithm based on an adaptive spin glass model.

Pierre Fillard , Cyril Poupon , Jean-François Mangin

Medical image computing and computer-assisted intervention : MICCAI .. International Conference on Medical Image Computing and Computer-Assisted Intervention, 2009, 12 (Pt 1), pp.927-34. ⟨10.1007/978-3-642-04268-3_114⟩

Article dans une revue inria-00502716v1

Asynchrony of the early maturation of white matter bundles in healthy infants: quantitative landmarks revealed noninvasively by diffusion tensor imaging.

Jessica Dubois , Ghislaine Dehaene-Lambertz , Muriel Perrin , Jean-François Mangin , Yann Cointepas et al.

Human Brain Mapping, 2008, 29 (1), pp.14-27. ⟨10.1002/hbm.20363⟩

Article dans une revue hal-00349654v1

Connectivity-Based Parcellation of the Cortical Mantle Using q-Ball Diffusion Imaging

Muriel Perrin , Yann Cointepas , Arnaud Cachia , Cyril Poupon , Bertrand Thirion et al.

International Journal of Biomedical Imaging, 2008, 2008, pp.368406. ⟨10.1155/2008/368406⟩

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Probabilistic anatomo-functional parcellation of the cortex: how many regions?

Alan Tucholka , Bertrand Thirion , Matthieu Perrot , Philippe Pinel , Jean-François Mangin et al.

Medical image computing and computer-assisted intervention : MICCAI .. International Conference on Medical Image Computing and Computer-Assisted Intervention, 2008, 11 (Pt 2), pp.399-406. ⟨10.1007/978-3-540-85990-1_48⟩

Article dans une revue inria-00502805v1
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Structural analysis of fMRI data revisited: improving the sensitivity and reliability of fMRI group studies.

Bertrand Thirion , Philippe Pinel , Alan Tucholka , Alexis Roche , Philippe Ciuciu et al.

IEEE Transactions on Medical Imaging, 2007, 26 (9), pp.1256-69. ⟨10.1109/TMI.2007.903226⟩

Article dans une revue cea-00333747v1

Three-dimensional reconstruction of stained histological slices and 3D non-linear registration with in-vivo MRI for whole baboon brain

Julien C. Dauguet , Thierry Delzescaux , Françoise Condé , Jean-François Mangin , Nicholas Ayache et al.

Journal of Neuroscience Methods, 2007, 164 (1), pp.191-204

Article dans une revue inria-00616027v1

Validation of q-ball imaging with a diffusion fibre-crossing phantom on a clinical scanner.

Muriel Perrin , Cyril Poupon , Bernard Rieul , Patrick Leroux , André Constantinesco et al.

Philosophical Transactions of the Royal Society B: Biological Sciences, 2005, 360 (1457), pp.881-91. ⟨10.1098/rstb.2005.1650⟩

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Automatized clustering and functional geometry of human parietofrontal networks for language, space, and number

Olivier Simon , Ferath Kherif , Guillaume Flandin , Jean-Baptiste Poline , Denis Rivière et al.

NeuroImage, 2004, 23 (3), pp.1192-202. ⟨10.1016/j.neuroimage.2004.09.023⟩

Article dans une revue istex hal-00349681v1

Retinotopic organization of visual mental images as revealed by functional magnetic resonance imaging.

Isabelle Klein , Jessica Dubois , Jean-François Mangin , Ferath Kherif , Guillaume Flandin et al.

Cognitive Brain Research, 2004, 22 (1), pp.26-31. ⟨10.1016/j.cogbrainres.2004.07.006⟩

Article dans une revue istex hal-00349680v1
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Foot, hand, face and eye representation in the human striatum.

Emmanuel Gerardin , Stéphane Lehéricy , Jean-Baptiste Pochon , Sophie Tézenas Du Montcel , Jean-François Mangin et al.

Cerebral Cortex, 2003, 13 (2), pp.162-9. ⟨10.1093/cercor/13.2.162⟩

Article dans une revue hal-00349699v1

Functional and structural alterations of the intraparietal sulcus in a developmental dyscalculia of genetic origin.

Nicolas Molko , Arnaud Cachia , Denis Rivière , Jean-François Mangin , Marie Bruandet et al.

Neuron, 2003, 40 (4), pp.847-58. ⟨10.1007/s00106-008-1787-x⟩

Article dans une revue istex hal-00349694v1

Topographical layout of hand, eye, calculation, and language-related areas in the human parietal lobe.

Olivier Simon , Jean-François Mangin , Laurent D. Cohen , Denis Le Bihan , Stanislas Dehaene

Neuron, 2002, 33 (3), pp.475-87

Article dans une revue hal-00349713v1

Monitoring disease progression in CADASIL with diffusion magnetic resonance imaging: a study with whole brain histogram analysis.

Nicolas Molko , Sabina Pappata , Jean-François Mangin , Fabrice Poupon , Denis Le Bihan et al.

Stroke, 2002, 33 (12), pp.2902-8

Article dans une revue hal-00349703v1

What is the best similarity measure for motion correction in fMRI time series?

Luis Freire , Alexis Roche , Jean-François Mangin

IEEE Transactions on Medical Imaging, 2002, 21 (5), pp.470-84. ⟨10.1109/TMI.2002.1009383⟩

Article dans une revue cea-00333696v1
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RIGHT COLLATERAL SULCUS MORPHOLOGY CORRELATES WITH RECEPTIVE COMMUNICATION IN PRETERM BORN ADOLESCENTS AND NEONATES

Racim Menasria , Julien Laval , Denis Rivière , Jessica Dubois , Jean-François Mangin et al.

ISBI 2026, IEE, Apr 2026, London, United Kingdom

Communication dans un congrès hal-05556078v1

The brain of Homo neanderthalensis

Antoine Balzeau , Eric Bardinet , Ameline Bardo , Anne-Laure Bernat , Mélanie Didier et al.

15th Annual Meeting of the European Society for the study of Human Evolution, Sep 2025, Paris, France

Communication dans un congrès hal-05491688v1
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STRUCTURAL-CONNECTIVITY-BASED INDIVIDUAL PARCELLATIONS IMPROVE REGIONAL CORTICAL THICKNESS HERITABILITY STUDY

Clément Langlet , Denis Rivière , Antoine Grigis , Vincent Frouin , Jean-François Mangin

ISBI 2024, May 2024, Athenes, Grece, France

Communication dans un congrès hal-04577309v1

Analysis of sulcal markings on volunteer endocasts through MRI-derived segmented model and establishment of an atlas of observed sulci on the endocast.

Victor Giolland , Nicole Labra Avila , Aurélien Mounier , Mélanie Didier , Eric Bardinet et al.

ESHE 2024 Meeting, European Society for the study of Human Evolution, Sep 2024, Zagreb, Croatie, Croatia

Communication dans un congrès hal-04731718v1
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Supervised diagnosis prediction from cortical sulci: toward the discovery of neurodevelopmental biomarkers in mental disorders

Pierre Auriau , Antoine Grigis , Benoit Dufumier , Robin Louiset , Joel Chavas et al.

21st IEEE International Symposium on Biomedical Imaging (ISBI 2024), IEEE, May 2024, Athènes, Greece

Communication dans un congrès hal-04494994v1
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Self-supervised contrastive learning unveils cortical folding pattern linked to prematurity

Julien Laval , Aymeric Gaudin , Vincent Frouin , Jessica Dubois , Andrea Gondova et al.

MIDL 2024, Jul 2024, Paris, France

Communication dans un congrès hal-04562435v1

Définition de la normalité du fer intracérébral par IRM/QSM pour le diagnostic des maladies neurodégénératives

Miguel Guevara , Stéphane Roche , Davy Cam , Jacques Badagbon , Michel Bottlaender et al.

Journées Francophones de Radiologie 2023, Marc ZINS, Oct 2023, Paris, France

Communication dans un congrès hal-04271807v1
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Detection of abnormal folding patterns with unsupervised deep generative models

Louise Guillon , Bastien Cagna , Benoit Dufumier , Joël Chavas , Denis Rivière et al.

MLCN workshop, held in conjunction of MICCAI, Sep 2021, Strasbourg, France

Communication dans un congrès hal-03349112v1

Manifold-based exploration of the links between precentral sulcus interruptions and language-associated area 55b

Z. Y. Sun , C Fischer , A. Grigis , D. Rivière , Jean-François Mangin

OHBM (Organization for Human Brain Mapping ), 2020, Montreal, Canada

Communication dans un congrès hal-02876129v1

Unearthing the Evolutionary History of Genetic Variants Influencing Human Sulcal Widening Authors: Introduction

Hervé Lemaître , Yann Le Guen , Amanda Tilot , Jason J Stein , Cathy Philippe et al.

OHBM ( Organization for Human Brain Mapping ), 2019, Rome, Italy

Communication dans un congrès hal-02876133v1

Manifold-based exploration of the links between cortical morphology and functional architecture

Zhong Yi Sun , Denis Rivière , Clara Fischer , Antoine Grigis , Cyril Poupon et al.

OHBM (Organization for Human Brain Mapping ), 2019, Rome, Italy

Communication dans un congrès hal-02876128v1
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Heritability of surface area and cortical thickness: a comparison between the Human Connectome Project and the UK Biobank dataset

Yann Le Guen , Slim Karkar , Antoine Grigis , Cathy Philippe , Jean-François Mangin et al.

ISBI 2019 - Proceedings of the IEEE International Symposium on Biomedical Imaging, 2019, Venice, Italy

Communication dans un congrès cea-02016831v1

Folding dynamics of the Central Sulcus : a longitudinal study on preterms

Héloïse de Vareilles , Zhong Yi Sun , Manon Benders , Clara Fischer , François Leroy et al.

OHBM, 2019, Rome, Italy

Communication dans un congrès hal-02876130v1
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CHENONCEAU: towards a novel mesoscopic (100/200μm) post-mortem human brain MRI atlas at 11.7T

Justine Beaujoin , Alexandros Popov , Raïssa Yebga Hot , Fabrice Poupon , Jean-François Mangin et al.

OHBM ( Organization for Human Brain Mapping ), 2019, Rome, Italy

Communication dans un congrès hal-02876136v1

Sulcal-based morphometry in Parkinson’s disease: a study of reliability and disease effects

Fabrizio Pizzagalli , Guillaume Auzias , Armand Amini , Joshua Faskowitz , Faisal Rashid et al.

14th International Symposium on Medical Information Processing and Analysis, Oct 2018, Mazatlán, France. pp.33, ⟨10.1117/12.2511590⟩

Communication dans un congrès hal-03026975v1

New Anatomical Characterizations of the Posterior Sylvian Fissure using the Human Connectome Project Database

Z. Y. Sun , D. Rivière , C Fischer , Jean-François Mangin

OHBM, 2018, Singapour, Singapore

Communication dans un congrès hal-02876125v1
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A study of feasibility for genome-wide haplotype association of complex traits in imaging genetics

Slim Karkar , Yann Le Guen , Cathy Philippe , Claire Dandine-Roulland , Morgane Pierre-Jean et al.

BIBM 2018 - Proceedings of The IEEE International Conference on Bioinformatics and Biomedicine, Dec 2018, Madrid, Spain

Communication dans un congrès cea-02016635v1
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Regional study of the genetic influence on the sulcal pits

Yann Le Guen , Guillaume Auzias , Ghislaine Dehaene-Lambertz , Francois Leroy , Jean-François Mangin et al.

2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017), Apr 2017, Melbourne, France. ⟨10.1109/ISBI.2017.7950472⟩

Communication dans un congrès hal-01784779v1
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Congenital unilateral upper limb absence flattens the contralateral hand knob

Zhong Yi Sun , Arnaud Cachia , Denis Rivière , Clara Fischer , Tamar Makin et al.

2017 Organization for Human Brain Mapping Meeting (OHBM 2017), Organization for Human Brain Mapping, Jun 2017, Vancouver, Canada

Communication dans un congrès hal-02876124v1
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Exploring the successive waves of cortical folding in the developing brain using MRI and spectral analysis of gyrification

Jessica Dubois , David Germanaud , Hugo Angleys , François Leroy , Clara Fischer et al.

13th IEEE International Symposium on Biomedical Imaging (ISBI 2016), Apr 2016, Prague, Czech Republic. ⟨10.1109/ISBI.2016.7493259⟩

Communication dans un congrès hal-01458746v1

Cartographie T2* sur cerveau entier pour les études multicentriques de recherche clinique

David Gay , Marie Chupin , Cyril Poupon , Jean-François Mangin , Hugo Dary et al.

2. SFRMBM, Mar 2015, Grenoble, France. 1 p

Communication dans un congrès hal-02743971v1

Asymmetric depth of the superior temporal sulcus: A widely stable landmark in the human brain

Francois Leroy , Qing Cai , Stéphanie L. Bogart , Jessica Dubois , Olivier Coulon et al.

20th Annual Meeting of the Organization for Human Brain Mapping, 2014, Hamburg, Région indéterminée

Communication dans un congrès hal-01488234v1

Asymmetry of the Superior Temporal Sulcus: a Robust Human Landmark

Francois Leroy , Stéphanie L. Bogart , William Hopkins , Olivier Coulon , Qing Cai et al.

OHBM 2013 - International Conference on Human Brain Mapping, Jun 2013, Seattle, WA, USA, États-Unis

Communication dans un congrès hal-01488253v1
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Joint T1 and Brain Fiber Log-Demons Registration Using Currents to Model Geometry

Viviana Siless , Joan Glaunès , Pamela Guevara , Jean-François Mangin , Cyril Poupon et al.

MICCAI, Oct 2012, Nice, France, France

Communication dans un congrès hal-00723367v1

Tools to study development, aging and genetics of intersubject variability in cortical morphology

Peter Kochunov , William Rogers , Jack Lancaster , Olivier Coulon , Jean-François Mangin

17th Annual Meeting of the Organization for Human Brain Mapping, 2011, QUEBEC, Région indéterminée

Communication dans un congrès hal-01488277v1

The sound of one hand clapping in the chimpanzees brain (Pan troglodytes): Neurocorrelates of asymmetries for auditory gestures in the motor hand and homologous language areas

Adrien Meguerditchian , Stéphanie L. Bogart , Claudio Cantalupo , Talia M. Nir , Olivier Coulon et al.

Meeting of the American Society of Primatology, 2011, Austin, Texas, Région indéterminée

Communication dans un congrès hal-01488268v1

DISCO: a coherent diffeomorphic framework for brain registration under exhaustive sulcal constraints

Guillaume Auzias , Joan Alexis Glaunès , Olivier Colliot , Perrot Matthieu , Jean-François Mangin et al.

Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009, Sep 2009, United Kingdom. pp.730-738

Communication dans un congrès hal-00534432v1

Constructing a dictionary of human brain folding patterns

Zhong Yi Sun , Matthieu Perrot , Alan Tucholka , Denis Rivière , Jean-François Mangin

Medical Image Computing and Computer-Assisted Intervention – MICCAI 2009, Sep 2009, London, United Kingdom. pp.117-24

Communication dans un congrès hal-00776671v1

Multi-Scale Diffeomorphic Cortical Registration Under Manifold Sulcal Constraints

Guillaume Auzias , Joan Alexis Glaunès , Arnaud Cachia , Pascal Cathier , Eric Bardinet et al.

2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 2008, France. pp.1127-1130

Communication dans un congrès hal-00534433v1

Robust Inter-Slice Intensity Normalization using Histogram Scale-Space Analysis

Julien C. Dauguet , Jean-François Mangin , Thierry Delzescaux , Vincent Frouin

Proc. of MICCAI'04, 2004, Saint-Malo, France, France. pp.242--249

Communication dans un congrès inria-00615980v1

Multisubject Non-Rigid Registration of Brain MRI using Intensity and Geometric Features

Pascal Cachier , Jean-François Mangin , Xavier Pennec , Denis Rivière , Dimitri Papadopoulos-Orfanos et al.

4th Int. Conf. on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01), 2001, Utrecht, The Netherlands, Netherlands. pp.734--742, ⟨10.1007/3-540-45468-3_88⟩

Communication dans un congrès istex inria-00615871v1
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Mapping the Human Brain from the Prenatal Period to Infancy Using 3D Magnetic Resonance Imaging

Arnaud Cachia , Jean-François Mangin , Jessica Dubois

The Cambridge Handbook of Cognitive Development, Cambridge University Press, pp.50-84, 2022

Chapitre d'ouvrage hal-04050914v1

Inference of an Extended Short Fiber Bundle Atlas Using Sulcus-Based Constraints for a Diffeomorphic Inter-subject Alignment

Nicole Labra Avila , Jessica Lebenberg , Denis Rivière , Guillaume Auzias , Clara Fischer et al.

Computational Diffusion MRI International MICCAI Workshop, Granada, Spain, September 2018, pp.323-333, 2019, ⟨10.1007/978-3-030-05831-9_25⟩

Chapitre d'ouvrage hal-03026974v1

Sulcus Identification and Labeling

Jean-François Mangin , Matthieu Perrot , Grégory Operto , Arnaud Cachia , Clara Fischer et al.

Arthur W. Toga. Brain Mapping: An Encyclopedic Reference, 1, pp.365-371, 2015

Chapitre d'ouvrage hal-01487996v1

Sulci as Landmarks

Jean-François Mangin , Guillaume Auzias , Olivier Coulon , Zhong Yi Sun , Denis Rivière et al.

Toga, Arthur W. Brain Mapping: an Encyclopedic Reference, pp."45 - 52",, 2015

Chapitre d'ouvrage hal-01487991v1
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Benchmarking transfer learning from Human to Chimpanzee for sulcus recognition

Pierre Auriau , Bastien Cagna , Denis Rivière , Ophelie Foubet , William D Hopkins et al.

OHBM, Jun 2022, Glasgow, United Kingdom

Poster de conférence hal-05448426v1
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The morphological evolution of the primate brain revealed by alignment of the cortical sulci

Yann Leprince , Alexia Stochino , Ophélie Foubet , William D. Hopkins , Jean-François Mangin

OHBM 2020 - 26th Annual Meeting of the Organization for Human Brain Mapping, Jun 2020, Virtual meeting, Canada. , 2020

Poster de conférence cea-02868500v1
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Comparison of the motor-hand area morphology in Great Apes

Ophelie Foubet , Zhong Yi Sun , Alexia Stochino , Yann Leprince , William Hopkins et al.

OBHM 2020 - Organization for Human Brain Mapping, Jun 2020, Virtual conference, France.

Poster de conférence hal-03970936v1
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Architectonics-informed partition of the cortex at sub-millimetre resolution

Yann Leprince , Clara Fischer , Jean-François Mangin , Benoît Larrat , Sébastien Mériaux et al.

20th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Jun 2014, Hamburg, Germany. , 5, pp.951, 2014, F1000Posters

Poster de conférence cea-01074735v1

A standardised clinical multicentric whole brain T2* mapping protocol at 3T

David Gay , Marie Chupin , Jean-François Mangin , Cyril Poupon , Hugo Dary et al.

ISMRM Annual Meeting Montréal, Jun 2016, Singapour, Singapore. 1 p., 2016

Proceedings/Recueil des communications hal-02796427v1