
Jean-Marc AURY
78%
Libre accès
204
Documents
Affiliation actuelle
- Laboratoire de Bioinformatique pour la Génomique et la Biodiversité (LBGB)
Identifiants chercheurs
Publications
Publications
Deciphering metatranscriptomic dataMethods in Molecular Biology, 1269, Springer, pp.279-291, 2015, RNA Bioinformatics, 978-1-4939-2290-1. ⟨10.1007/978-1-4939-2291-8_17⟩
Chapitre d'ouvrage
hal-01104015
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De novo sequencing and assembly of genomes using long readsRevolutionizing Next-Generation Sequencing, Mar 2023, Ghent, Belgium
Communication dans un congrès
hal-04443667
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Functional diversity of microbial eukaryotes in a meromictic lake: coupling between metatranscriptomic and a trait-based approachIX European Congress of Protistology & Annual Congress of the International Society of Protistologists, Jul 2023, Vienna, Austria
Communication dans un congrès
hal-04795139
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De novo sequencing and assembly of complex genomesreads2genpop : From sequence reads to genomes and populations, Sep 2022, Paris, Auditorium de la Grande Galerie de l’Evolution, France
Communication dans un congrès
hal-04443758
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Perkinsea: what the hell are they doing in freshwater lake ecosystemConférence Jacques Monod, Sep 2022, Roscoff (FR), France
Communication dans un congrès
hal-04793990
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European mink (Mustela lutreola) reference genome and population genomics34th European Mustelid Colloquium, Sep 2022, Online conference, France
Communication dans un congrès
hal-03787589
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Métabarcoding et étude de traits, vers une description de la diversité taxonomique et fonctionnelle des eucaryotes unicellulaires dans le lac PavinJournées Thématiques de l'AFEM, Jun 2022, Clermont-Ferrand, France
Communication dans un congrès
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High-quality genome assemblies of corals highlight the specifics of their long lifespanEAGS, France Génomique, Oct 2021, Tours (France), France
Communication dans un congrès
hal-04440766
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De novo sequencing and assembly of complex genomesEnvironmental and Agronomical Genomics Symposium, Oct 2021, Tours, France
Communication dans un congrès
hal-04443602
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Avancées sur l’amélioration de l’assemblage de la variété de colza Darmor via l’utilisation des dernières technologies de séquençage26e Carrefour de la sélection du colza, Jan 2020, Orléans, France
Communication dans un congrès
hal-03318169
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Co-evolution of chloroplast and nuclear genomes in flowering plants and impact of allopolyploidy on fine tune cytonuclear interactions.International Conference on Polyploidy, Jun 2019, Ghent, Belgium
Communication dans un congrès
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Pelagia noctiluca as a model to uncover scyphozoan developmental mechanisms.At the roots of bilaterian complexity: Insights from early emerging metazoans., 2019, Evangelische Akademie Tutzing, Germany
Communication dans un congrès
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Chromosome-Scale Assemblies of Plant Genomes using Nanopore Long Reads and Optical MapsPlant and Animal Genome XXVII Conference, Jan 2019, San Diego, United States
Communication dans un congrès
hal-04443565
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Cytonuclear interactions remain stable during allopolyploid evolution despite repeated wholegenome duplications21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2019, Saint Malo, France
Communication dans un congrès
hal-04665569
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Structural and functional evolutionary dynamics of duplicated genes and genomes in nascent and natural B. napus21st Crucifer Genetics Conference on Brassica - Brassica 2018, Jul 2019, Saint-Malo, France
Communication dans un congrès
hal-03318226
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Deciphering the synganglion transcriptome of Ixodes ricinus14. Réunion annuelle du groupe « Tiques et Maladies Transmises » du « Réseau Ecologie Interactions Durable » (REID), May 2019, Montpellier, France
Communication dans un congrès
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How a polyploid becomes a new species: example from the Brassica model.International Conference on Environmental and Agronomical Genomics, 2018, Paris, France
Communication dans un congrès
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An integrated information system dedicated to oak genomics and geneticsPAG XXVI Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.27 slides
Communication dans un congrès
hal-01839185
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CARNAC-LR : Clustering coefficient-based Acquisition of RNA Communities in Long ReadsJOBIM 2018 - Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2018, Marseille, France. pp.1-3
Communication dans un congrès
hal-01930211
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Identification et analyse fonctionnelle des effecteurs tardifs impliqués dans la colonisation systémique du colza par Leptosphaeria maculansJournées Jean Chevauchon JJC2018 - 12èmes Rencontres de Phytopathologie & Mycologie,, Jan 2018, Aussois, France. p.50
Communication dans un congrès
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Cytonuclear interactions overcome inter-genomic conflict resulting from interspecific hybridization and genome doublingSecond Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France
Communication dans un congrès
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Discovering genes involved in ecological preference in European white oaks using an RNAseq approachWorkshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shangai, China
Communication dans un congrès
hal-03351960
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Identification of recent secondary contacts between four morphologically distinct oak speciesGenomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès
hal-02743580
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Oak genome sequencing and evolutionGenomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès
hal-02741698
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Discovering genes involved in ecological speciation in European white oaks using an RNAseq approachGenomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès
hal-02741267
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Annotation of the oak genome sequence and associated bioinformatic resourcesIUFRO Genomics and Forest Tree Genetics, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès
hal-02741128
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Recurrent domestication of viral genomes leads to different virulence strategies in ichneumonid waspsRéunion du réseau ADALEP, 2016, Paris, France
Communication dans un congrès
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Using genomic tools to unravel parasitic wasp genome evolution via acquisition of viral genomesArthropod Genomics Symposium, 2015, Manhattan, Kansas, United States
Communication dans un congrès
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A reference sequence of wheat chromosome 3B3. Plant Genomics Congress, May 2015, London, United Kingdom
Communication dans un congrès
hal-02740971
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Assembling a pseudomolecule for a wheat chromosome: the 3B experience22. Conference on Plant and Animal Genome, Jan 2014, San Diego, Californie, United States
Communication dans un congrès
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A reference sequence of wheat chromosome 3B22. Conference on Plant and Animal Genome, Jan 2014, San Diego, United States
Communication dans un congrès
hal-02742303
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Origine évolutive des “Virus-like particles” de Venturia canescensRéunion annuelle du Réseau Ecologie des Interactions Durables (REID), Feb 2014, Montpellier, France
Communication dans un congrès
hal-01991483
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Acquisition of viruses as a driver in endoparasitic ichneumonid wasp evolutionCNRS Jacques Monod Conference "Infectious diseases as drivers of evolution: the challenges ahead”, 2014, Roscoff, France
Communication dans un congrès
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Sequencing and Assembling a Reference Sequence of the 1 Gb Wheat Chromosome 3BIWGSC Wheat Genome Sequencing Strategy and Funding Workshop, International Wheat Genome Sequencing Consortium (IWGSC). USA., Apr 2013, Evry, France
Communication dans un congrès
hal-02747374
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A strategy to assemble a reference sequence of the 1 Gb wheat chromosome 3BTGAC/ESF-LESC workshop, Strategies for de novo assemblies of complex crop genomes, Genome Analysis Centre (TGAC). Norwich, GBR., Oct 2012, Norwich, United Kingdom
Communication dans un congrès
hal-02809032
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Genomic resources for functional analysis in <em>Medicago truncatula</em> and related crop species6. International Conference on Legume Genetics and Genomics, International Crops Research Institute for the Semi-Arid Tropics, CGIAR (ICRISAT). Patancheru, IND., Oct 2012, Hyderabad, India
Communication dans un congrès
hal-02747944
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Sequencing and analysis of the oak transcriptome using RNA-seq technologiesIUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès
hal-02806071
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Development of genomic resources to study the structure, function and evolution of the oak genomeIUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès
hal-01019850
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Nature, nurture and the structure of macroalgal genomes5. European Phycological Congress, Sep 2011, Rhodes, Greece
Communication dans un congrès
hal-02749757
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