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Metagenomics revealed a correlation of gut phageome with autism spectrum disorder
Khashayar Shahin
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Abbas Soleimani-Delfan
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Zihan He
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Philippe Sansonetti
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Jean-Marc Collard
Journal articles
pasteur-04178004v1
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One Health compartment analysis of ESBL-producing Escherichia coli reveals multiple transmission events in a rural area of Madagascar
Noellie Gay
,
Mamitina Alain Noah Rabenandrasana
,
Harielle Prisca Panandiniaina
,
Marie Florence Rakotoninidrina
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Ilo Tsimok’haja Ramahatafandry
Journal articles
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Incidence and risk factors of neonatal bacterial infections: a community-based cohort from Madagascar (2018–2021)
Ines Devred
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Lison Rambliere
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Perlinot Herindrainy
,
Lovarivelo Andriamarohasina
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Aina Harimanana
Journal articles
pasteur-04232738v1
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Excess risk of subsequent infection in hospitalized children from a community cohort study in Cambodia and Madagascar
Lison Rambliere
,
Elsa Kermorvant-Duchemin
,
Agathe de Lauzanne
,
Jean-Marc Collard
,
Perlinot Herindrainy
Journal articles
pasteur-03622472v1
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Prevalence and factors associated with faecal carriage of extended-spectrum β-lactamase-producing Enterobacterales among peripartum women in the community in Cambodia
Agathe de Lauzanne
,
Navin Sreng
,
Elsa Foucaud
,
Touch Sok
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Thida Chon
Journal articles
pasteur-03717304v1
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High prevalence of small intestine bacteria overgrowth and asymptomatic carriage of enteric pathogens in stunted children in Antananarivo, Madagascar
Jean-Marc Collard
,
Lova Andrianonimiadana
,
Azimdine Habib
,
Maheninasy Rakotondrainipiana
,
Prisca Andriantsalama
Journal articles
pasteur-03677601v1
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Putative Biomarkers of Environmental Enteric Disease Fail to Correlate in a Cross-Sectional Study in Two Study Sites in Sub-Saharan Africa
Pascale Vonaesch
,
Munir Winkel
,
Nathalie Kapel
,
Alison Nestoret
,
Laurence Barbot-Trystram
Journal articles
hal-03876624v1
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Neonatal acquisition of extended-spectrum beta-lactamase-producing Enterobacteriaceae in the community of a low-income country (NeoLIC): Protocol for a household cohort study in Moramanga, Madagascar
Aina Nirina Harimanana
,
Andriniaina Rakotondrasoa
,
Lalainasoa Odile Rivoarilala
,
Alexis Criscuolo
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Lulla Opatowski
Journal articles
hal-03837369v1
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Stunted children display ectopic small intestinal colonization by oral bacteria, which cause lipid malabsorption in experimental models
Pascale Vonaesch
,
João Araújo
,
Jean-Chrysostome Gody
,
Jean-Robert Mbecko
,
Hugues Sanke
Proceedings of the National Academy of Sciences of the United States of America, 2022, 119 (41), pp.e2209589119. ⟨10.1073/pnas.2209589119⟩
Journal articles
pasteur-03879197v1
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Factors associated with anaemia among preschool- age children in underprivileged neighbourhoods in Antananarivo, Madagascar
Mirella Malala Randrianarisoa
,
Maheninasy Rakotondrainipiana
,
Ravaka Randriamparany
,
Prisca Vega Andriantsalama
,
Anjasoa Randrianarijaona
Journal articles
pasteur-03879225v1
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Severe bacterial neonatal infections in Madagascar, Senegal, and Cambodia: A multicentric community-based cohort study
Bich-Tram Huynh
,
Elsa Kermorvant-Duchemin
,
Rattanak Chheang
,
Frederique Randrianirina
,
Abdoulaye Seck
Journal articles
pasteur-03357830v1
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High prevalence of intestinal parasite infestations among stunted and control children aged 2 to 5 years old in two neighborhoods of Antananarivo, Madagascar
Azimdine Habib
,
Lova Andrianonimiadana
,
Maheninasy Rakotondrainipiana
,
Prisca Andriantsalama
,
Ravaka Randriamparany
Journal articles
pasteur-03506537v1
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Prevalence and Factors Associated with Maternal Group B Streptococcus Colonization in Madagascar and Senegal
Yu-Jin Jung
,
Bich-Tram Huynh
,
Abdoulaye Seck
,
Raymond Bercion
,
Fatoumata Diene Sarr
Journal articles
pasteur-03356643v1
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Immunoglobulin recognition of fecal bacteria in stunted and non-stunted children: findings from the Afribiota study
Kelsey E. Huus
,
André Rodriguez-Pozo
,
Nathalie Kapel
,
Alison Nestoret
,
Azimdine Habib
Journal articles
pasteur-02937036v1
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Characterization of Klebsiella pneumoniae isolates from a mother-child cohort in Madagascar
Andriniaina Rakotondrasoa
,
Virginie Passet
,
Perlinot Herindrainy
,
Benoît Garin
,
Elsa Kermorvant-Duchemin
Journal articles
pasteur-02862906v1
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Genome-based insights into the resistomes and mobilomes of two Providencia rettgeri strains isolated from wound infections in Madagascar
Pierrette Landrie Simo Tchuinte
,
Mamitina Alain Noah Rabenandrasana
,
Lovasoa Ramparany
,
Elisoa Ratsima
,
Vincent Enouf
Journal articles
pasteur-03238212v1
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Seroprevalence of pertussis in Madagascar and implications for vaccination
Solohery L. Razafimahatratra
,
Amy Wesolowski
,
Lala Rafetrarivony
,
Jean-Michel Heraud
,
Forrest K. Jones
Journal articles
pasteur-03250509v1
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Klebsiella pneumoniae carriage in low-income countries: antimicrobial resistance, genomic diversity and risk factors
Bich-Tram Huynh
,
Virginie Passet
,
Andriniaina Rakotondrasoa
,
Thierno Diallo
,
Alexandra Kerleguer
Journal articles
pasteur-02866178v1
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Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism
Chrispin Chaguza
,
Marie Yang
,
Jennifer E. Cornick
,
Mignon Du Plessis
,
Rebecca A. Gladstone
Journal articles
pasteur-03238211v1
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Risk factors for acquisition of meningococcal carriage in the African meningitis belt
Laura V. Cooper
,
Anna Robson
,
Caroline L. Trotter
,
Abraham Aseffa
,
Jean-Marc Collard
Journal articles
hal-02263733v1
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Transmission Routes of Extended-Spectrum Beta-Lactamase–Producing Enterobacteriaceae in a Neonatology Ward in Madagascar
Mélanie Bonneault
,
Volasoa Herilalaina Andrianoelina
,
Perlinot Herindrainy
,
Mamitina Alain Noah Rabenandrasana
,
Benoit Garin
Journal articles
hal-02279835v1
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Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar
Mamitina Alain Noah Rabenandrasana
,
Lala Fanomezantsoa Rafetrarivony
,
Lalainasoa Odile Rivoarilala
,
Vincent Enouf
,
Annick Lalaina Robinson
Journal articles
hal-02875195v1
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Phenotypic and molecular characterisations of carbapenem-resistant Acinetobacter baumannii strains isolated in Madagascar
Pierrette Landrie Simo Tchuinte
,
Mamitiana Alain Noah Rabenandrasana
,
Carole Kowalewicz
,
Volasoa Herilalaina Andrianoelina
,
Andriniaina Rakotondrasoa
Journal articles
pasteur-03238213v1
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|
Melioidosis in the Western Indian Ocean and the Importance of Improving Diagnosis, Surveillance, and Molecular Typing
Andriniaina Rakotondrasoa
,
Mohammad Iqbal Issack
,
Benoit Garin
,
Fabrice Biot
,
Eric Valade
Journal articles
pasteur-01916211v1
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|
Development of a PCR algorithm to detect and characterize Neisseria meningitidis carriage isolates in the African meningitis belt
Kanny Diallo
,
Mamadou D. Coulibaly
,
Lisa S. Rebbetts
,
Odile B. Harrison
,
Jay Lucidarme
Journal articles
pasteur-03238217v1
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Identifying the etiology and pathophysiology underlying stunting and environmental enteropathy: study protocol of the AFRIBIOTA project
Pascale Vonaesch
,
Rindra Randremanana
,
Jean-Chrysostome Gody
,
Jean-Marc Collard
,
Tamara Giles-Vernick
Journal articles
pasteur-01913093v1
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|
Bacterial Infections in Neonates, Madagascar, 2012–2014
Bich-Tram Huynh
,
Elsa Kermorvant-Duchemin
,
Perlinot Herindrainy
,
Michael Padget
,
Feno Jacob Rakotoarimanana
Journal articles
pasteur-01955491v1
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|
Triplex real-time PCR assay for the detection of Streptococcus pneumoniae, Neisseria meningitidis and Haemophilus influenzae directly from clinical specimens without extraction of DNA
Mahamoudou Ouattara
,
Melissa Whaley
,
Laurel T Jenkins
,
Stephanie Schwartz
,
Rasmata Ouédraogo Traoré
Journal articles
pasteur-01973057v1
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|
Combating Global Antibiotic Resistance: Emerging One Health Concerns in Lower- and Middle-Income Countries
Maya Nadimpalli
,
Elisabeth Delarocque-Astagneau
,
David Love
,
Lance Price
,
Bich-Tram Huynh
Journal articles
pasteur-01739401v1
|
|
Acquisition of extended spectrum beta-lactamase-producing enterobacteriaceae in neonates: A community based cohort in Madagascar
Perlinot Herindrainy
,
Mamitiana Alain Noah Rabenandrasana
,
Zafitsara Zo Andrianirina
,
Feno Manitra Jacob Rakotoarimanana
,
Michael Padget
Journal articles
pasteur-01909314v1
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|
Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa
Pascale Vonaesch
,
Evan Morien
,
Lova Andrianonimiadana
,
Hugues Sanke
,
Jean-Robert Mbecko
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (36), pp.E8489 - E8498. ⟨10.1073/pnas.1806573115⟩
Journal articles
pasteur-01925069v1
|
|
Health crises due to infectious and communicable diseases : European preparedness and response tools in an international context
Patrick Mahy
,
Jean-Marc Collard
,
Jean-Luc Gala
,
Philippe Herman
,
Dirk De Groof
Journal of Business Continuity and Emergency Planning, 2017, 10 (4), pp.353 - 366
Journal articles
pasteur-01930458v1
|
|
Airborne dust and high temperatures are risk factors for invasive bacterial disease
Jean-François Jusot
,
Daniel R. Neill
,
Elaine M. Waters
,
Mathieu Bangert
,
Marisol Collins
Journal articles
pasteur-03238492v1
|
|
The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1
Jennifer E. Cornick
,
Özlem Tastan Bishop
,
Feyruz Yalcin
,
Anmol M. Kiran
,
Benjamin Kumwenda
Journal articles
pasteur-03238484v1
|
|
Etiologies of acute respiratory infections in children aged 1 to 59 months in Niger
Sani Ousmane
,
Ibrahim D Dano
,
Kamaye Moumouni
,
Soumana Alido
,
Issa Idi
International Journal of Microbiology and Mycology | IJMM |, 2017, 6 (1), pp.16-23
Journal articles
pasteur-01670464v1
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|
Investigation of correlates of protection against pharyngeal carriage of Neisseria meningitidis genogroups W and Y in the African meningitis belt
Laura V. Cooper
,
Rahamatou Moustapha Boukary
,
Abraham Aseffa
,
Wude Mihret
,
Jean-Marc Collard
Journal articles
pasteur-03238475v1
|
|
Review of Antibiotic Resistance in the Indian Ocean Commission: A Human and Animal Health Issue
Noellie Gay
,
Olivier Belmonte
,
Jean-Marc Collard
,
Mohamed Halifa
,
Mohammad Iqbal Issack
Journal articles
pasteur-01934609v1
|
|
Serotype Distribution and Antimicrobial Sensitivity Profile of Streptococcus pneumoniae Carried in Healthy Toddlers before PCV13 Introduction in Niamey, Niger
Sani Ousmane
,
Bouli A Diallo
,
Rasmata Ouédraogo
,
Abdel-Kader A Sanda
,
Amadou M Soussou
Journal articles
pasteur-01634984v1
|
|
Development of Real-Time PCR Methods for the Detection of Bacterial Meningitis Pathogens without DNA Extraction
Jeni Vuong
,
Jean-Marc Collard
,
Melissa J. Whaley
,
Issaka Bassira
,
Issaka Seidou
Journal articles
pasteur-03238510v1
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|
A Seroepidemiological Study of Serogroup A Meningococcal Infection in the African Meningitis Belt
Olivier Manigart
,
Caroline Trotter
,
Helen Findlow
,
Abraham Aseffa
,
Wude Mihret
Journal articles
pasteur-03238501v1
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|
Understanding pneumococcal serotype 1 biology through population genomic analysis
Chrispin Chaguza
,
Jennifer E. Cornick
,
Simon R. Harris
,
Cheryl P. Andam
,
Laura Bricio-Moreno
Journal articles
pasteur-03238485v1
|
|
Pharyngeal carriage of Neisseria species in the African meningitis belt
Kanny Diallo
,
Caroline Trotter
,
Youssouf Timbine
,
Boubou Tamboura
,
Samba O. Sow
Journal articles
pasteur-03238495v1
|
|
Household transmission of Neisseria meningitidis in the African meningitis belt: a longitudinal cohort study
Menafricar Consortium
,
Rahamatou Moustapha Boukary
,
Jean-Marc Collard
,
Ibrahim Dan Dano
,
Ibrahim Habiboulaye
Journal articles
pasteur-03238489v1
|
|
The Diversity of Meningococcal Carriage Across the African Meningitis Belt and the Impact of Vaccination With a Group A Meningococcal Conjugate Vaccine
Menafricar Consortium
,
Jean-Marc Collard
Journal articles
pasteur-03238519v1
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|
Multidrug-Resistant Salmonella enterica Serotype Typhi, Gulf of Guinea Region, Africa
Maria Pardos de La Gandara
,
Murielle Baltazar
,
Antoinette Ngandjio
,
Kathryn Elizabeth Holt
,
Elodie Lepillet
Journal articles
pasteur-01134243v1
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|
Public Health Impact After the Introduction of PsA-TT: The First 4 Years
Fabien V. K. Diomandé
,
Mamoudou H. Djingarey
,
Doumagoum M. Daugla
,
Ryan T. Novak
,
Paul A. Kristiansen
Journal articles
pasteur-03238511v1
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|
Region-specific diversification of the highly virulent serotype 1 Streptococcus pneumoniae
Jennifer E. Cornick
,
Chrispin Chaguza
,
Simon R. Harris
,
Feyruz Yalcin
,
Madikay Senghore
Journal articles
pasteur-03238516v1
|
|
MLVA-typing on Streptococcus pneumoniae serotype 1 isolated from meningitis cases in Niger before the introduction of PCV-13 revealed a low genetic diversity
Abdelkader Alio Sanda
,
Alexandra Granger Farbos
,
Amina Amadou Hamidou
,
Pascale Vonaesch
,
Jean-François Jusot
Transactions of The Royal Society of Tropical Medicine and Hygiene, 2015, 109 (7), pp.477-480. ⟨10.1093/trstmh/trv033⟩
Journal articles
pasteur-03238518v1
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|
Changes in Meningococcal Strains in the Era of a Serogroup C Vaccination Campaign: Trends and Evolution in Belgium during the Period 1997–2012
Wesley Mattheus
,
Germaine Hanquet
,
Jean-Marc Collard
,
Raymond Vanhoof
,
Sophie Bertrand
Journal articles
pasteur-03238512v1
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|
Spatio-Temporal Factors Associated with Meningococcal Meningitis Annual Incidence at the Health Centre Level in Niger, 2004–2010
Juliette Paireau
,
Halima B. Mainassara
,
Jean-François Jusot
,
Jean-Marc Collard
,
Issa Idi
Journal articles
hal-01343080v1
|
|
Rotavirus Surveillance in Urban and Rural Areas of Niger, April 2010–March 2012
Anne-Laure Page
,
Viviane Jusot
,
Abdoul-Aziz Mamaty
,
Lagare Adamou
,
Jérôme Kaplon
Journal articles
pasteur-03238533v1
|
|
Prevalence of Bordetella Infection in a Hospital Setting in Niamey, Niger
Viviane Jusot
,
Said Aberrane
,
Franck Ale
,
Boubou Laouali
,
Issa Moussa
Journal articles
pasteur-03238536v1
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|
Laboratory evaluation of a rapid diagnostic test for Neisseria meningitidis serogroup A.
Aude Terrade
,
Jean-Marc Collard
,
Farida Nato
,
Muhamed-Kheir Taha
Transactions of The Royal Society of Tropical Medicine and Hygiene, 2013, 107 (7), pp.460-461. ⟨10.1093/trstmh/trt041⟩
Journal articles
pasteur-02088923v1
|
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Methods for Identifying Neisseria meningitidis Carriers: A Multi-Center Study in the African Meningitis Belt
Nicole E. Basta
,
James M. Stuart
,
Maria C. Nascimento
,
Olivier Manigart
,
Caroline Trotter
Journal articles
pasteur-03238545v1
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|
A five-year field assessment of rapid diagnostic tests for meningococcal meningitis in Niger by using the combination of conventional and real-time PCR assays as a gold standard.
Jean-Marc Collard
,
Xin Wang
,
Ali Elhaj Mahamane
,
Issa Idi
,
Bassira Issaka
Transactions of The Royal Society of Tropical Medicine and Hygiene, 2013, 108 (1), pp.6-12. ⟨10.1093/trstmh/trt104⟩
Journal articles
pasteur-01333084v1
|
|
Epidemiological changes in meningococcal meningitis in Niger from 2008 to 2011 and the impact of vaccination.
Jean-Marc Collard
,
Bassira Issaka
,
Maman Zaneidou
,
Stéphane Hugonnet
,
Pierre Nicolas
Journal articles
pasteur-00917555v1
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|
Priorities for research on meningococcal disease and the impact of serogroup A vaccination in the African meningitis belt
Danny Altmann
,
Abraham Aseffa
,
Margaret Bash
,
Nicole Basta
,
Ray Borrow
Journal articles
hal-03034411v1
|
|
Determination of Pneumococcal Serotypes in Meningitis Cases in Niger, 2003–2011
Jean-Marc Collard
,
Abdel-Kader Alio Sanda
,
Jean-François Jusot
Journal articles
pasteur-03238558v1
|
|
Significant sequelae after bacterial meningitis in Niger: a cohort study.
Jean-François Jusot
,
Zilahatou Tohon
,
Abdoul Aziz Yazi
,
Jean-Marc Collard
Journal articles
pasteur-01332861v1
|
|
Meningococcal carriage in the African meningitis belt
Menafricar Consortium
,
Jean-Marc Collard
Journal articles
pasteur-03238549v1
|
|
Analysing Spatio-Temporal Clustering of Meningococcal Meningitis Outbreaks in Niger Reveals Opportunities for Improved Disease Control
Juliette Paireau
,
Florian Girond
,
Jean-Marc Collard
,
Halima Maïnassara
,
Jean-François Jusot
Journal articles
pasteur-01704781v1
|
|
Transmission of multiple resistant Salmonella Concord from internationally adopted children to their adoptive families and social environment: proposition of guidelines
R. Vanhoof
,
P. Gillis
,
O. Stévart
,
C. Boland
,
O. Vandenberg
Journal articles
pasteur-03238571v1
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|
Influenza transmission during a one-year period (2009-2010) in a Sahelian city: low temperature plays a major role
Jean-François Jusot
,
Lagaré Adamou
,
Jean-Marc Collard
Journal articles
pasteur-03238575v1
|
|
Spatiotemporal circulation of influenza viruses in 5 African countries during 2008-2009: a collaborative study of the Institut Pasteur International Network.
Jean-Michel Heraud
,
Richard Njouom
,
Dominique Rousset
,
Herve Kadjo
,
Valerie Caro
Journal articles
pasteur-00835730v1
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|
Delayed 2009 Pandemic Influenza A Virus Subtype H1N1 Circulation in West Africa, May 2009–April 2010
Ndahwouh Talla Nzussouo
,
Jennifer Michalove
,
Ousmane M. Diop
,
Richard Njouom
,
Maria de Lourdes Monteiro
Journal articles
pasteur-03238564v1
|
|
Detection of a geographical and endemic cluster of hyper-invasive meningococcal strains.
Sophie Bertrand
,
Eva van Meervenne
,
Thierry de Baere
,
Raymond Vanhoof
,
Jean-Marc Collard
Journal articles
pasteur-02093292v1
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|
Novel insertion sequence- and transposon-mediated genetic rearrangements in genomic island SGI1 of Salmonella enterica serovar Kentucky
Benoît Doublet
,
Karine Praud
,
Sophie Bertrand
,
Jean-Marc Collard
,
François-Xavier Weill
Journal articles
hal-02666456v1
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|
Travel-acquired salmonellosis due to Salmonella Kentucky resistant to ciprofloxacin, ceftriaxone and co-trimoxazole and associated with treatment failure
Jean-Marc Collard
,
Sammy Place
,
Olivier Denis
,
Hector Rodriguez-Villalobos
,
Martine Vrints
Journal articles
hal-02656023v1
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|
Dissemination of an extended-spectrum-beta-lactamase bla(TEM-52) gene-carrying IncI1 plasmid in various Salmonella enterica serovars isolated from poultry and humans in Belgium and France between 2001 and 2005
Axel Cloeckaert
,
Karine Praud
,
Benoît Doublet
,
Alessia Bertini
,
Alessandra Carattoli
Journal articles
hal-02656891v1
|
|
Clonal emergence of extended-spectrum β-lactamase (CTX-M-2)-producing Salmonella enterica serovar Virchow isolates with reduced susceptibilities to ciprofloxacin among poultry and humans in Belgium and France (2000 to 2003)
Sophie Bertrand
,
François-Xavier Weill
,
Axel Cloeckaert
,
Martine Vrints
,
Eric Mairiaux
Journal articles
hal-02661603v1
|