Jérémy LOBRY

Directeur de recherche en écologie marine INRAE EABX Centre de Nouvelle Aquitaine - Bordeaux

122

Documents

Current affiliations

577435
1002494

Researcher identifiers

jeremy-lobry
0000-0002-4567-3714
IdRef : 083894810

Presentation

Publications

	Cross-basin and cross-taxa patterns of marine community tropicalization and deborealization in warming European seas Guillem Chust , Ernesto Villarino , Matthew Mclean , Nova Mieszkowska , Lisandro Benedetti-Cecchi Nature Communications, 2024, 15 (1), 2126 (13p.). ⟨10.1038/s41467-024-46526-y⟩ Journal articles hal-04573216v1
	Linking individual experiments and multiscale models to simulate physiological perturbations on aquatic food webs Pierre Bourdaud , Nathalie Niquil , Emma Araignous , Henrique Cabral , Alexandre Carpentier Frontiers in Ecology and Evolution, 2024, 12, ⟨10.3389/fevo.2024.1400936⟩ Journal articles hal-04727178v1
	Modeling the impact of floating offshore wind turbines on marine food webs in the Gulf of Lion, France Mathieu Adgé , Jérémy Lobry , Anne Tessier , Serge Planes Frontiers in Marine Science, 2024, 11, ⟨10.3389/fmars.2024.1379331⟩ Journal articles hal-04638671v1
	Assessing food limitation for marine juvenile fishes in coastal nurseries using a bioenergetic approach Marion Lefebvre Du Prey , Jérémy Lobry , Anik Brind'Amour , Hervé Le Bris , Bastien Sadoul Ecological Modelling, 2023, 482, pp.110419. ⟨10.1016/j.ecolmodel.2023.110419⟩ Journal articles hal-04195323v1
	ESCROpath , a Bayesian mixing model to quantify diets and trophic flows in aquatic food webs Jérémy Lobry , Florence Mounier , Marine Ballutaud , Xavier Chevillot , Didier D. Gascuel Methods in Ecology and Evolution, 2022, 13 (4), pp.894-907. ⟨10.1111/2041-210X.13808⟩ Journal articles hal-03738729v1
	Contrasting impacts of climate change on connectivity and larval recruitment to estuarine nursery areas Henrique Cabral , Hilaire Drouineau , Ana Teles-Machado , Maud Pierre , Mario Lepage Progress in Oceanography, 2021, 196, pp.102608. ⟨10.1016/j.pocean.2021.102608⟩ Journal articles hal-03241532v1
	Interpretation of interannual variability in long-term aquatic ecological surveys Sophie Cauvy-Fraunié , Verena Trenkel , Martin Daufresne , Anthony Maire , Hervé Capra Canadian Journal of Fisheries and Aquatic Sciences, 2020, 77 (5), pp.894-903. ⟨10.1139/cjfas-2019-0146⟩ Journal articles hal-02493153v1
	Dietary bioaccumulation of persistent organic pollutants in the common sole Solea solea in the context of global change. Part 1: Revisiting parameterisation and calibration of a DEB model to consider inter-individual variability in experimental and natural conditions Florence Mounier , Laure Pecquerie , Jérémy Lobry , Adriana E Sardi , Pierre Labadie Ecological Modelling, 2020, 433, pp.109224. ⟨10.1016/j.ecolmodel.2020.109224⟩ Journal articles hal-02926101v1
	Dietary bioaccumulation of persistent organic pollutants in the common sole Solea solea in the context of global change. Part 2: Sensitivity of juvenile growth and contamination to toxicokinetic parameters uncertainty and environmental conditions variability in estuaries Florence Mounier , Véronique Loizeau , Laure Pecquerie , Hilaire Drouineau , Pierre Labadie Ecological Modelling, 2020, 431, pp.109196. ⟨10.1016/j.ecolmodel.2020.109196⟩ Journal articles hal-02926105v1
	Major biomass fluctuations in lake food webs – An example in the peri-alpine Lake Annecy Marine Lemaire , Jean Guillard , Orlane Anneville , Jérémy Lobry Journal of Great Lakes Research, 2020, 46 (4), pp.798-812. ⟨10.1016/j.jglr.2020.04.007⟩ Journal articles hal-03325076v1
	Temporal variations of perfluoroalkyl substances partitioning between surface water, suspended sediment, and biota in a macrotidal estuary Gabriel Munoz , Hélène Budzinski , Marc Babut , Jérémy Lobry , Jonathan Selleslagh Chemosphere, 2019, 233, pp.319-326. ⟨10.1016/j.chemosphere.2019.05.281⟩ Journal articles hal-02145736v1
	EStimating Contaminants tRansfers Over Complex food webs (ESCROC): An innovative Bayesian method for estimating POP's biomagnification in aquatic food webs Marine Ballutaud , Hilaire Drouineau , Laure Carassou , Gregory Munoz , Xavier Chevillot Science of the Total Environment, 2019, 658, pp.638-659. ⟨10.1016/j.scitotenv.2018.12.0580048-9697⟩ Journal articles hal-02608305v1
	Assessing the ecological status of an estuarine ecosystem: linking biodiversity and food-web indicators Camille Le Guen , Samuele Tecchio , Jean-Claude Dauvin , Gwenola de Roton , Jérémy Lobry Estuarine, Coastal and Shelf Science, 2019, 228, pp.106339. ⟨10.1016/j.ecss.2019.106339⟩ Journal articles hal-02346068v1
	Global Changes Jeopardize the Trophic Carrying Capacity and Functioning of Estuarine Ecosystems Xavier Chevillot , Samuele Tecchio , Aurélie Chaalali , Géraldine Lassalle , Jonathan Selleslagh Ecosystems, 2019, 22 (3), pp.473-495. ⟨10.1007/s10021-018-0282-9⟩ Journal articles hal-02154192v1
	Environmental drivers of taxonomic, functional and phylogenetic diversity (alpha, beta and gamma components) in estuarine fish communities Nils Teichert , Mario Lepage , X. Chevillot , Jérémy Lobry Journal of Biogeography, 2018, 45 (2), pp.406-417. ⟨10.1111/jbi.13133⟩ Journal articles hal-02607012v1
	Nekton communities of tidally restored marshes: A whole-estuary approach A. Lechêne , Philippe Boët , Pascal Laffaille , Jérémy Lobry Estuarine, Coastal and Shelf Science, 2018, 207 (31), pp.368-382. ⟨10.1016/j.ecss.2017.08.038⟩ Journal articles hal-02606996v1
	A generic method to assess species exploratory potential under climate change F. Massiot Granier , Géraldine Lassalle , P.R. Almeida , Miran Aprahamian , M. Castonguay Ecological Indicators, 2018, 90, pp.615-623. ⟨10.1016/j.ecolind.2018.03.047⟩ Journal articles hal-02607496v1
	Influence of intertidal seascape on the functional structure of fish assemblages: Implications for habitat conservation in estuarine ecosystems Nils Teichert , Laure Carassou , Yohan Sahraoui , Jérémy Lobry , Mario Lepage Aquatic Conservation: Marine and Freshwater Ecosystems, 2018, 28 (4), pp.798-809. ⟨10.1002/aqc.2914⟩ Journal articles halshs-03169433v1
	Beyond classic ecological assessment: The use of functional indices to indicate fish assemblages sensitivity to human disturbance in estuaries Nils Teichert , Mario Lepage , Jérémy Lobry Science of the Total Environment, 2018, 639, pp.465-475. ⟨10.1016/j.scitotenv.2018.05.179⟩ Journal articles hal-02607510v1
	Influence of intertidal seascape on the functional structure of fish assemblages: Implications for habitat conservation in estuarine ecosystems Nils Teichert , Laure Carassou , Yohan Sahraoui , Jérémy Lobry , Mario Lepage Aquatic Conservation: Marine and Freshwater Ecosystems, 2018, 28 (4), pp.798-809. ⟨10.1002/aqc.2914⟩ Journal articles hal-02607511v1
	Change in fish functional diversity and assembly rules in the course of tidal marsh restoration A. Lechêne , Jérémy Lobry , Philippe Boët , Pascal Laffaille PLoS ONE, 2018, 13 (12), pp.e0209025. ⟨10.1371/journal.pone.0209025⟩ Journal articles hal-02074291v1
	Evidence for the Trophic Transfer of Perfluoroalkylated Substances in a Temperate Macrotidal Estuary Gabriel Munoz , Hélène Budzinski , Marc Babut , Hilaire Drouineau , Mathilde Lauzent Environmental Science and Technology, 2017, 51 (15), pp.8450-8459. ⟨10.1021/acs.est.7b02399⟩ Journal articles hal-02067250v1
	Fish communities in the Anthropocene: detecting drivers of changes in the deep peri-alpine Lake Geneva Orlane Anneville , C. Vogel , Jérémy Lobry , Jean Guillard Inland Waters, 2017, 7 (1), pp.65-76. ⟨10.1080/20442041.2017.1294350⟩ Journal articles hal-02606314v1
	L'halieutique ou l'exploitation des ressources vivantes aquatiques : une science protéiforme Hilaire Drouineau , Jérémy Lobry , Nicolas Bez , M. Travers Trolet , Youen Vermard Subaqua, 2017, 271, pp.28-29 Journal articles hal-02606150v1
	How does climate change make fish late for dinner? X. Chevillot , Hilaire Drouineau , Patrick Lambert , Laure Carassou , B. Sautour Environmental Science Journal for Teens, 2017, octobre, pp.5 Journal articles hal-02607235v1
	Toward a phenological mismatch in estuarine pelagic food web? X. Chevillot , Hilaire Drouineau , Patrick Lambert , Laure Carassou , Benoît Sautour PLoS ONE, 2017, 12 (3), pp.e0173752. ⟨10.1371/journal.pone.0173752⟩ Journal articles hal-01541495v1
	Abrupt shifts in the Gironde fish community: an indicator of ecological changes in an estuarine ecosystem X. Chevillot , M. Pierre , A. Rigaud , Hilaire Drouineau , A. Chaalali Marine Ecology Progress Series, 2016, 549, pp.137-151. ⟨10.3354/meps11681⟩ Journal articles hal-01411213v1
	Can analysis of Platichthys flesus otoliths provide relevant data on historical metal pollution in estuaries? Experimental and in situ approaches J. Selleslagh , A. Echard , Christophe Pécheyran , M. Baudrimont , Jérémy Lobry Science of the Total Environment, 2016, 557-558, pp.20--30. ⟨10.1016/j.scitotenv.2016.03.014⟩ Journal articles hal-01495766v1
	Estuarine habitats structure zooplankton communities: Implications for the pelagic trophic pathways V. David , J. Selleslagh , A. Nowaczyk , S. Dubois , G. Bachelet Estuarine, Coastal and Shelf Science, 2016, 179, pp.99-111. ⟨10.1016/j.ecss.2016.01.022⟩ Journal articles hal-02604791v1
	From species distributions to ecosystem structure and function: A methodological perspective Aurélie Chaalali , Grégory Beaugrand , Virginie Raybaud , Géraldine Lassalle , Blanche Saint-Béat Ecological Modelling, 2016, 334, pp.78-90. ⟨10.1016/j.ecolmodel.2016.04.022⟩ Journal articles hal-01318422v1
	Evaluating ecosystem-level anthropogenic impacts in a stressed transitional environment: The case of the Seine estuary Samuele Tecchio , Aurélie Chaalali , Aurore Raoux , Armonie Tous Rius , Justine Lequesne Ecological Indicators, 2016, 61 (2), pp.833-845. ⟨10.1016/j.ecolind.2015.10.036⟩ Journal articles hal-01483254v1
	The need for a protean fisheries science to address the degradation of exploited aquatic ecosystems Hilaire Drouineau , Jérémy Lobry , N. Bez , M. Travers Trolet , Y. Vermard Aquatic Living Resources, 2016, 29 (2), 20 p. ⟨10.1051/alr/2016021⟩ Journal articles hal-01394122v1
	Feeding Habitats, Connectivity and Origin of Organic MatterSupporting Fish Populations in an Estuary with a ReducedIntertidal Area Assessed by Stable Isotope Analysis J. Selleslagh , H. Blanchet , G. Bachelet , Jérémy Lobry Estuaries and Coasts, 2015, 38, pp.1431-1447. ⟨10.1007/s12237-014-9911-5⟩ Journal articles hal-02601670v1
	Les poissons de l’estuaire de la Gironde : 30 ans de changements, et maintenant ? Jérémy Lobry Adour Garonne, 2015, 131, pp.20-21 Journal articles hal-02602031v1
	Incorporating food-web parameter uncertainty into Ecopath-derived ecological network indicators Vanessa Guesnet , Géraldine Lassalle , Aurélie Chaalali , Kelly Kearney , Blanche Saint-Béat Ecological Modelling, 2015, 313, pp.29-40. ⟨10.1016/j.ecolmodel.2015.05.036⟩ Journal articles hal-01186765v1
	A new modeling approach to define marine ecosystems food-web status with uncertainty assessment Aurélie Chaalali , Blanche Saint-Béat , Géraldine Lassalle , François Le Loc’h , Samuele Tecchio Progress in Oceanography, 2015, 135, pp.37-47. ⟨10.1016/j.pocean.2015.03.012⟩ Journal articles hal-01158158v1
	The mosaic of habitats of the Seine estuary: Insights from food-web modelling and network analysis Samuele Tecchio , Armonie Tous Rius , Jean-Claude Dauvin , Jérémy Lobry , Géraldine Lassalle Ecological Modelling, 2015, 312, pp.91-101. ⟨10.1016/j.ecolmodel.2015.05.026⟩ Journal articles hal-02154211v1
	Subproblem finite-element refinement of homogenized dielectric layers in wound inductors for accurate local stresses computation Zacharie de Grève , Patrick Dular , Gérard Meunier , Christophe Geuzaine , Olivier Deblecker IEEE Transactions on Magnetics, 2015, 51 (3), pp.DOI10.1109/TMAG.2014.2364331. ⟨10.1109/tmag.2014.2364331⟩ Journal articles hal-01298587v1
	Hydroacoustics as a relevant tool to monitor fish dynamics in large estuaries Valérie Samedy , M. Wach , Jérémy Lobry , Jonathan Selleslagh , Maud Pierre Fisheries Research, 2015, 172, pp.225-233. ⟨10.1016/j.fishres.2015.07.025⟩ Journal articles hal-02560897v1
	Reaction of an estuarine food web to disturbance: Lindeman's perspective N. Niquil , A. Baeta , J.C. Marques , A. Chaalali , Jérémy Lobry Marine Ecology Progress Series, 2014, 512, pp.141--154. ⟨10.3354/meps10885⟩ Journal articles hal-02454840v1
	Reaction of an estuarine food web to disturbance: Lindeman’s perspective N. Niquil , A. Baeta , J.C. Marques , A. Chaalali , Jérémy Lobry Marine Ecology Progress Series, 2014, 512, pp.141-154 Journal articles hal-02602265v1
	A fish-based index of estuarine ecological quality incorporating information from both scientific fish survey and experts knowledge A. Tableau , Hilaire Drouineau , C. Delpech , M. Pierre , Jérémy Lobry Ecological Indicators, 2013, 32, p. 147 - p. 156. ⟨10.1016/j.ecolind.2013.03.030⟩ Journal articles hal-00824755v1
	Strength and time lag of relationships between human pressures and fish-based metrics used to assess ecological quality of estuarine systems Stéphanie Pasquaud , A. Courrat , V.F. Fonseca , R. Gamito , C.I. Gonçalves Estuarine, Coastal and Shelf Science, 2013, 134, pp.119-127 Journal articles hal-02599074v1
	Ecosystem status and functioning: Searching for rules of thumb using an intersite comparison of food-web models of Northeast Atlantic continental shelves Géraldine Lassalle , Jérémy Lobry , François Le Loc’h , S. Mackinson , F. Sanchez ICES Journal of Marine Science, 2013, 70 (1), pp.135--149. ⟨10.1093/icesjms/fss168⟩ Journal articles hal-02454848v1
	Seasonal succession of estuarine fish, shrimps, macrozoobenthos and plankton: physico-chemical and trophic influence. The ironde estuary as a case study J. Selleslagh , Jérémy Lobry , A.R. N'Zigou , G. Bachelet , H. Blanchet Estuarine, Coastal and Shelf Science, 2012, 112, pp.243-254. ⟨10.1016/j.ecss.2012.07.030⟩ Journal articles hal-02597393v1
	An ecosystem approach for the assessment of fisheries impacts on marine top predators: the Bay of Biscay case study Géraldine Lassalle , Didier D. Gascuel , François Le Loc’h , Jérémy Lobry , Gj. Pierce ICES Journal of Marine Science, 2012, 69 (6), pp.925-938. ⟨10.1093/icesjms/fss049⟩ Journal articles hal-00840402v1
	Trophic functioning of coastal ecosystems along an anthropogenic pressure gradient: A French case study with emphasis on a small and low impacted estuary J. Selleslagh , Jérémy Lobry , Jean-Michel Brylinski , Rachid Amara , Philippe Boët Estuarine, Coastal and Shelf Science, 2012, 112, pp.73-85. ⟨10.1016/j.ecss.2011.08.004⟩ Journal articles hal-00760872v1
	A Bayesian framework to objectively combine metrics when developing stressor specific multimetric indicator Hilaire Drouineau , Jérémy Lobry , C. Delpech , M. Bouchoucha , S. Mahévas Ecological Indicators, 2012, 13 (1), p. 314 - p. 321. ⟨10.1016/j.ecolind.2011.06.029⟩ Journal articles hal-00654282v1
	Increase of marine juvenile fish abundances in the middle Gironde estuary related to warmer and more saline waters, due to global changes Stéphanie Pasquaud , Mélanie Béguer , M. H. Larsen , A. Chaalali , Henrique Cabral Estuarine, Coastal and Shelf Science, 2012, 104-105, pp.46-53. ⟨10.1016/j.ecss.2012.03.021⟩ Journal articles hal-02597096v1
	Impact of global warming on European tidal estuaries: some evidence of northward migration of estuarine fish species D. Nicolas , A. Chaalali , Hilaire Drouineau , Jérémy Lobry , A. Uriarte Regional Environmental Change, 2011, 11 (3), pp.639-649. ⟨10.1007/s10113-010-0196-3⟩ Journal articles hal-02596093v1
	Lower trophic levels and detrital biomass control the Bay of Biscay continental shelf food web: Implications for ecosystem management Géraldine Lassalle , Jérémy Lobry , François Le Loc’h , Paco Bustamante , Grégoire Certain Progress in Oceanography, 2011, 91 (4), pp.561-575. ⟨10.1016/j.pocean.2011.09.002⟩ Journal articles hal-00683349v1
	A future for marine fisheries in Europe (Manifesto of the Association Francaise d'Halieumetrie) Didier D. Gascuel , Nicolas Bez , André Forest , Patrice Guillotreau , Francis Laloe Fisheries Research, 2011, 109 (1), pp.6. ⟨10.1016/j.fishres.2011.02.002⟩ Journal articles hal-00730149v1
	Regard critique sur la mise en place d'indicateurs d'évaluation de l'efficacité des aires marines protégées Stéphanie Pasquaud , Jérémy Lobry Sciences Eaux & Territoires, 2010, 3, p. 122 - p. 125. ⟨10.14758/SET-REVUE.2010.3.23⟩ Journal articles hal-00553052v1
	Regard critique sur la mise en place d’indicateurs d’évaluation de l’efficacité des aires marines protégées Stephanie Pasquaud , Jérémy Lobry Sciences Eaux & Territoires, 2010, 3, pp.1-4 Journal articles hal-03975249v1
	Impact of warming on abundance and occurrence of flatfish populations in the Bay of Biscay (France) Marie Hermant , Jérémy Lobry , Sylvain Bonhommeau , Jean Charles Poulard , Olivier Le Pape Journal of Sea Research (JSR), 2010, 64 (1-2), pp.45-53. ⟨10.1016/j.seares.2009.07.001⟩ Journal articles hal-00494573v1
	Exploitation of trophic resources by fish under stressful estuarine conditions Stéphanie Pasquaud , V. David , Jérémy Lobry , Michel Girardin , B. Sautour Marine Ecology Progress Series, 2010, 400, p. 207 - p. 219 Journal articles hal-00474342v1
	Functional diversity in European estuaries: Relating the composition of fish assemblages to the abiotic environment D. Nicolas , Jérémy Lobry , Olivier Le Pape , Philippe Boët Estuarine, Coastal and Shelf Science, 2010, 88 (3), p. 329 - p. 338. ⟨10.1016/j.ecss.2010.04.010⟩ Journal articles hal-00584043v1
	Development of a fish-based index to assess the ecological quality of transitional waters: The case of French estuaries C. Delpech , A. Courrat , Stéphanie Pasquaud , Jérémy Lobry , Olivier Le Pape Marine Pollution Bulletin, 2010, 60 (6), p. 908 - p. 918. ⟨10.1016/j.marpolbul.2010.01.001⟩ Journal articles hal-00584047v1
	Gyroscopic magnetic levitation: an original design procedure based on the finite element method Z. de Grève , C. Versèle , Jérémy Lobry European Physical Journal: Applied Physics, 2010, 52 (2), ⟨10.1051/epjap/2010080⟩ Journal articles hal-00634371v1
	Fish under influence: a macroecological analysis of relations between fish species richness and environmental gradients among European tidal estuaries D. Nicolas , Jérémy Lobry , Mario Lepage , B. Sautour , Olivier Le Pape Estuarine, Coastal and Shelf Science, 2010, 86 (1), p. 137 - p. 147. ⟨10.1016/j.ecss.2009.11.006⟩ Journal articles hal-00474505v1
	Assessment of the ecological status of coastal areas and estuaries in France, using multiple fish-based indicators: a comparative analysis on the Vilaine estuary A. Brind'Amour , Jérémy Lobry Aquatic Living Resources, 2009, 22, p. 559 - p. 572. ⟨10.1051/alr/2009052⟩ Journal articles hal-00585653v1
	Anthropogenic disturbance on nursery function of estuarine areas for marine species A. Courrat , Jérémy Lobry , D. Nicolas , P. Laffargue , Rachid Amara Estuarine, Coastal and Shelf Science, 2009, 81 (81), pp.179-190. ⟨10.1016/j.ecss.2008.10.017⟩ Journal articles hal-00480403v1
	Dealing with uncertainly in qualitative models with a semi-quantitative approach based on simulations: applications to the Gironde estuarine food web (France) S. Rochette , Jérémy Lobry , Mario Lepage , Philippe Boët Ecological Modelling, 2009, 220 (2), pp.122-132 Journal articles hal-02592907v1
	From detritus to man: diversity and stability of an estuarine trophic network Jérémy Lobry , V. David , Stéphanie Pasquaud , Mario Lepage , B. Sautour Marine Ecology Progress Series, 2008, 358, pp.13-25. ⟨10.3354/meps07294⟩ Journal articles hal-02590036v1
	Facing the necessity of describing estuarine ecosystems: a review of food web ecology study techniques Stéphanie Pasquaud , Jérémy Lobry , Pierre Elie Hydrobiologia, 2007, 588, pp.159-172 Journal articles hal-02588755v1
	From seasonal patterns to a reference situation in an estuarine environment: Example of the small fish and shrimp fauna of the Gironde estuary (SW France) Jérémy Lobry , Mario Lepage , Eric Rochard Estuarine, Coastal and Shelf Science, 2006, 70 (1-2), pp.239-250 Journal articles hal-02588349v1
	L'échantillonnage de la diversité piscicole en estuaires : stratégie et représentativité dans le contexte de la Directive cadre européenne sur l'eau Jérémy Lobry , Mario Lepage , Michel Girardin Ingénieries eau-agriculture-territoires, 2006, 45, p. 3 - p. 14 Journal articles hal-00601100v1
	La biodiversité spécifique des ressources démersales du plateau continental guinéen : utilisation d'indices classiques pour un diagnostic sur l'évolution de l'écosystème Jérémy Lobry , Didier D. Gascuel , F. Domain Aquatic Living Resources, 2003, 16 (2), pp.59-68. ⟨10.1016/S0990-7440(03)00010-X⟩ Journal articles hal-02581414v1
	Structure of the Gironde estuarine fish assemblages: a comparison of European estuaries perspective Jérémy Lobry , L. Mourand , Eric Rochard , Pierre Elie Aquatic Living Resources, 2003, 16 (2), pp.47-58. ⟨10.1016/S0990-7440(03)00031-7⟩ Journal articles hal-02581413v1
	Les cortèges ichtyologiques de l'estuaire de la Gironde. Réflexion sur l'établissement d'une situation de référence en vue d'identifier les perturbations Jérémy Lobry , Eric Rochard , Pierre Elie Journal de Recherche Océanographique., 2003, 28 (1 et 2), pp.76-80 Journal articles hal-02583638v1

	Fish distribution's shifts due to climate change in the Northeast Atlantic: using a hierarchical filtering approach on marine-estuarine opportunist species\| Anaïs Janc , Chloé Dambrine , Patrick Lambert , Géraldine Lassalle , Henrique Cabral FSBI ( Fisheries Society of the British Isles ) 2023 : Fish habitat ecology in a changing climate ·, Jul 2023, Colchester - Essex, United Kingdom Conference papers hal-04177495v1
	Major biomass fluctuations in lake food webs – An example in the peri-alpine Lake Annecy Marine Lemaire , Jean Guillard , Orlane Anneville , Jérémy Lobry Joint Conference of the European Large Lakes Symposium (ELLS) / Conference of the International-Association-for-Great-Lakes-Research (IAGLR) - Big Lakes - Small World, 2019, Evian, France. pp.798-812 Conference papers hal-03151915v1
	What drives the interannual variability in fish-population time series? S. Cauvy Fraunie , Hervé Capra , J.M. Olivier , Martin Daufresne , Jérémy Lobry SEFS 10: Symposium of European Freshwater Sciences, Jul 2017, Olomouc, Czech Republic. pp.1 Conference papers hal-02609335v1
	What drives the interannual variability in fish-population time series? S. Cauvy Fraunie , Verena Trenkel , Hervé Capra , J.M. Olivier , A. Maire International Long Term Ecological Research Network & LTER-France (Zones Ateliers Network & Critical Zone Observatories) joint conference, Oct 2017, Nantes, France. pp.15 Conference papers hal-02606638v1
	Habitat value of tidally restored marshes for fish and macrocrustaceans: feedback from two study cases in the Gironde estuary A. Lechêne , Philippe Boët , Pascal Laffaille , Jérémy Lobry Estuarine restoration: from theory to practice and back, ECSA symposium, Jul 2016, Anvers, Belgium. pp.30 Conference papers hal-02605029v1
	Approche multicritère de l’état de santé des écosystèmes estuariens : exemple de la Seine Nathalie Niquil , Samuele Tecchio , Camille Le Guen , Jean-Claude Dauvin , Géraldine Lasalle Colloques biennal des zones ateliers, Oct 2015, Paris, France Conference papers hal-03547575v1
	La marinisation de l'estuaire de la Gironde Jérémy Lobry Ecosystèmes aquatiques : quelles évolutions dans un contexte de changement climatique ?, Jun 2015, Toulouse, France. pp.7-10 Conference papers hal-02602264v1
	Climate-driven changes’ incidence on the food-web status of the Bay of Biscay: a focus on dominant fish species A. Chaalali , G. Beaugrand , M. Chifflet , V. Raybaud , Géraldine Lassalle ISOBAY 14, XIV International Symposium on Oceanography of the Bay of Biscay, Jun 2014, Bordeaux, France. pp.17 Conference papers hal-02604895v1
	Towards the evaluation of ecological consequences of hydromorphological evolutions of the Gironde estuary: A preliminary approach combining GIS and hydrodynamics modelling F. Fauvel , A. Just , V. Marieu , A. Sottolichio , Jérémy Lobry ECSA 50, Jun 2012, Venise, Italy. pp.14 Conference papers hal-02597280v1
	Cause-effect relationships strength and time lag in response to human pressures of metrics used to assess ecological quality of estuarine systems based on fish assemblages Stéphanie Pasquaud , A. Courrat , Jérémy Lobry , Mario Lepage , C.I. Gonçalves ELET Estuarine and Lagoon Ecosystem Trajectories, ECSA Symposium, Oct 2011, Bordeaux, France Conference papers hal-02596312v1
	Trophic model of the Canche estuary, a small estuary of the eastern English Channel: a comparison with other French coastal systems J. Selleslagh , Jérémy Lobry , Rachid Amara , Jean-Marie Brylinski , Vincent Cornille ECSA 47 Symposium, Sep 2010, Figueira da fos, Portugal. pp.16 Conference papers hal-02594569v1
	Fish under influence? A large-scale functional analysis of relations between abiotic gradients and fish assemblages of European tidal estuaries D. Nicolas , Jérémy Lobry , Philippe Boët ECSA 47 symposium, Sep 2010, Figueira da Foz, Portugal. pp.1 Conference papers hal-02594060v1
	Assessing contamination levels in transitional waters using fish-based core metrics: an original approach based on Bayesian framework Hilaire Drouineau , Jérémy Lobry , C. Delpech , M. Bouchoucha , Stéphanie Mahévas ICES Annual Science Conference, Sep 2010, Nantes, France. pp.12 Conference papers hal-02594115v1
	Assessing contamination levels in transitional waters using fish-based core metrics: an original approach based on Bayesian framework Hilaire Drouineau , Jérémy Lobry , C. Delpech , M. Bouchoucha , Stéphanie Mahévas ECSA Symposium 47, Sep 2010, Figueira da Foz, Portugal. pp.11 Conference papers hal-02594116v1
	Structural vs functional approaches: A first comparison between WFD indicators and Ecological Network Analysis indices on French estuaries Jérémy Lobry , J. Selleslagh , H. Blanchet , N. Niquil ECSA 47 Symposium, Sep 2010, Figueira da Foz, Portugal. pp.22 Conference papers hal-02594568v1
	Développement d'un indicateur poisson pour les eaux de transition : APR Liteau2 2005 Michel Girardin , R. Amara , Mario Lepage , Philippe Boët , Jérémy Lobry Colloque Liteau. Science et gouvernance en appui au développement durable du littoral, Dec 2009, Montpellier, France. pp.9 Conference papers hal-02596103v1
	Présentation de l'indicateur poisson dans les estuaires : Travail collaboratif réalisé dans le cadre de LITEAU II Mario Lepage , R. Amara , Philippe Boët , A. Courrat , C. Delpech Séminaire de lancement du projet Liteau III BEEST « Vers une approche multicritère du Bon Etat / potentiel écologique des grands ESTuaires Seine, Loire et Gironde », Nov 2009, Paris, France. pp.24 Conference papers hal-02594418v1
	Toward a macroscopic analysis of European tidal estuaries fish assemblages patterns D. Nicolas , Jérémy Lobry , Mario Lepage , B. Sautour , Olivier Le Pape ECSA 44 symposium, Sep 2008, Bahia Blanca, Argentina. pp.41 Conference papers hal-02594061v1
	Etat d'avancement des travaux sur l'indicateur poisson C. Delpech , Mario Lepage , Stéphanie Pasquaud , A. Courrat , D. Nicolas Séminaire Aquaref « Les approches hydrobiologiques pour la DCE et le continuum eaux douces- eaux littorales », Jun 2008, Paris, France. pp.19 Conference papers hal-02594421v1
	Indicateurs ichtyologiques pour le suivi de la fonctionnalité de nourricerie des masses d'eau de transition / xénobiotiques dans le cadre de la DCE A. Courrat , Jérémy Lobry , P. Laffargue , Mario Lepage , Michel Girardin Impact des organismes pathogènes et des micropolluants sur l'état de santé des poissons, mollusques et crustacés des milieux naturels : de l'individu au peuplement, Mar 2008, Nantes, France. pp.20 Conference papers hal-02593126v1
	Développement d'un indicateur poisson pour les eaux de transition : Définitions d'états de référence par type de MET Mario Lepage , A. Courrat , Jérémy Lobry , Olivier Le Pape , C. Delpech Séminaire Aquaref « Les approches hydrobiologiques pour la DCE et le continuum eaux douces- eaux littorales », Jun 2008, Paris, France. pp.10 Conference papers hal-02594420v1
	Detritus, fish and men...: The Gironde estuarine trophic structure Jérémy Lobry , Valérie David , Stéphanie Pasquaud , Benoit Sautour , Eric Rochard Changes in land uses: consequences on estuaries and coastal zones, ECSA, 38th symposium, Sep 2004, Rouen, France. pp.2 Conference papers hal-02583640v1
	Approche de la dynamique des assemblages ichtyologiques dans l'estuaire de la Gironde Jérémy Lobry , Eric Rochard , Pierre Elie 2èmes rencontres de l'ichtyologie en France, Paris, 25-28 mars 2003, 2003, France. pp.1 Conference papers hal-02581310v1

	Importance des mugilidés sur les réseaux trophiques côtiers dans un contexte de carence en oméga-3 : du niveau sub-individuel à la dynamique trophique Pierre Bourdaud , Lucien Besnard , Alexandre Carpentier , Hilaire Drouineau , Luuk van Der Heijden 15e colloque de l’AFH "Les systèmes halieutiques face aux crises", Jun 2022, Brest, France. 2022 Conference poster hal-04193349v1
	Structural vs functional approaches: A first comparison between water framework directive indicators and ENA indices on European estuaries Jérémy Lobry , V. Guesnet , Géraldine Lassalle , A. Chaalali , J. Selleslagh Ecopath 30 years conference, Nov 2014, Barcelona, Portugal. 2014 Conference poster hal-02600797v1
	Les petits pélagiques dans l'estuaire de la Gironde : 30 ans de suivi d'abondance face à 30 ans de changements globaux X. Chevillot , A. Rigaud , Hilaire Drouineau , A. Chaalali , Jérémy Lobry Exploitation et conservation des écosystèmes aquatiques : une question d'échelle, Jun 2013, Bordeaux, France. pp.1, 2013 Conference poster hal-02600367v1
	Développement d'un indicateur poisson pour les eaux de transition : Liteau2 2005-2008 Michel Girardin , Mario Lepage , Philippe Boët , Stéphanie Pasquaud , D. Nicolas Colloque Liteau. Science et gouvernance en appui au développement durable du littoral, Dec 2009, Montpellier, France. pp.1, 2009 Conference poster hal-02593075v1

	Stratégie d'observation à long terme : guide pour le suivi de l'ichtyofaune dans l'estuaire de la Seine Jérémy Lobry , Mario Lepage , J. Dublon , A. Lechêne , E. Feunteun GIP Seine aval, pp.19, 2013 Books hal-02605500v1

	Bordeaux, bientôt port de mer ? Jérémy Lobry Changement climatique, changement global : 55 résultats de recherche au service des territoires, Irstea, pp.94-95, 2015 Book sections hal-02602542v1

	Un avenir pour les pêches maritimes en Europe Didier D. Gascuel , N. Bez , Patrice Guillotreau , F. Laloe , Jérémy Lobry 2011, 10 p Other publications hal-00841899v1
	Les communautés de poissons et l'organisation trophique de l'estuaire de la Gironde Jérémy Lobry , Eric Rochard , Pierre Elie Système fluvio-estuarien de la Gironde, 2005, pp.11-13 Other publications hal-02587277v1
	The Gironde estuary: a European reference for fish population? Jérémy Lobry , Eric Rochard River basin management: from experience to implementation, 2003, pp.63-77 Other publications hal-02583637v1

	Surveillance halieutique de l'estuaire de la Gironde - Etude de la faune circulante 2020. Rapport pour EDF CNPE du Blayais Maud Pierre , Jérémy Lobry [Rapport de recherche] INRAE; SEANEO; EDF. 2021 Reports hal-03180792v1
	Surveillance halieutique de l'estuaire de la Gironde : suivi des captures 2015, étude de la faune circulante 2015 Jérémy Lobry , Gérard Castelnaud , M. Pierre [Rapport de recherche] irstea. 2016, pp.241 Reports hal-02607184v1
	Surveillance halieutique de l'estuaire de la Gironde : suivi des captures 2014, étude de la faune circulante 2014 Jérémy Lobry , Gérard Castelnaud [Rapport de recherche] irstea. 2015, pp.238 Reports hal-02604611v1
	Surveillance halieutique de l'estuaire de la Gironde : suivi des captures 2013, étude de la faune circulante 2013 Michel Girardin , Gérard Castelnaud , Jérémy Lobry [Rapport de recherche] irstea. 2014, pp.238 Reports hal-02602613v1
	Cartographier les fonctionnalités pour spatialiser le potentiel écologique : mise en place d'un outil SIG Habitats fonctionnels sur les estuaires de la Seine, de la Loire et de la Gironde : rapport N. Bacq , S. Moussard , Jérémy Lobry [Rapport de recherche] irstea. 2011, pp.26 Reports hal-02597454v1
	Synthèse du projet BEEST Philippe Boët , G. Bocquené , Gabrielle Bouleau , H. Etchebert , V. Foussard [Rapport de recherche] irstea. 2011, pp.100 Reports hal-02599542v1
	Réalisation de l'outil cartographique des habitats potentiels sur l'estuaire de la Gironde : rapport A. Just , Jérémy Lobry [Rapport de recherche] irstea. 2011, pp.67 Reports hal-02597057v1
	Le bon potentiel des estuaires : conclusions et perspectives du projet BEEST Gabrielle Bouleau , V. Foussard , C. Leveque , Jérémy Lobry , S. Moussard [Rapport de recherche] irstea. 2011, pp.20 Reports hal-02599578v1
	Développement d'un indicateur poisson pour les estuaires français. Indice anatomo-morphologique et parasitaire pour l'évaluation de l'état de santé des poissons Mario Lepage , Philippe Boët , Pierre Elie , R. Amara , Olivier Le Pape [Rapport de recherche] irstea. 2009, pp.263 Reports hal-02592732v1
	Développement d'un indicateur poisson pour les eaux de transition : programme LITEAU2 2005 Mario Lepage , R. Amara , Philippe Boët , A. Courrat , C. Delpech [Rapport de recherche] irstea. 2009, pp.75 Reports hal-02592841v1
	L'estuaire de la Gironde : présentation du système et des données disponibles Stéphanie Pasquaud , Michel Girardin , Mario Lepage , Philippe Boët , Pierre Elie [Rapport de recherche] irstea. 2008, pp.18 Reports hal-02593113v1
	Indicateurs ichtyologiques pour l'état des masses d'eau de transition dans le cadre de la DCE : méthodologie A. Courrat , Jérémy Lobry , D. Nicolas , C. Delpech , Stephanie Pasquaud [Rapport de recherche] irstea. 2008, pp.17 Reports hal-02593097v1
	Contribution à la caractérisation de l'état écologique de masses d'eaux de transition de type " estuaire " à partir du cas de la Gironde : Structure des assemblages ichtyologiques dans les milieux de type estuarien Jérémy Lobry , Mario Lepage , Michel Girardin , Paul Gonthier irstea. 2004, pp.15 Reports hal-02605603v1
	Méthode de classification pour la typologie des eaux côtières et de transition sur les côtes françaises de l'Atlantique et de la Manche : Document réalisé pour le Groupe de Travail National "DCE Eaux Littorales" Mario Lepage , Michel Girardin , Jérémy Lobry , M. Joanny irstea. 2004, pp.30 Reports hal-02605607v1
	Structure des assemblages ichtyologiques dans les milieux de transition de type estuarien : contribution à la caractérisation de l'état écologique à partir du cas de la Gironde - Année 2004 : typologie, échantillonnage et suivi Mario Lepage , Jérémy Lobry , Michel Girardin , Paul Gonthier irstea. 2004, pp.93 Reports hal-02584129v1
	Contribution à la caractérisation de l'état écologique de masses d'eaux de transition de type " estuaire "à partir du cas de la Gironde Jérémy Lobry , Paul Gonthier , Pierre Elie , Eric Rochard irstea. 2003, pp.22 Reports hal-02581715v1

	Les ressources exploitées par la pêche et la conchyliculture Nathalie Caill-Milly , Gilles Morandeau , Iker Castege , Florence Sanchez , Muriel Lissardy Ce rapport est disponible dans : Prévoir pour Agir, 2. 2018, pp.200-223 Report chapter hal-02785823v1

	Quel référentiel de fonctionnement pour les écosystèmes estuariens ? Le cas des cortèges de poissons fréquentant l'estuaire de la Gironde Jérémy Lobry Sciences de l'environnement. Doctorat Océanographie, Université de Bordeaux I, 2004. Français. ⟨NNT : ⟩ Theses tel-02584128v1

	Biodiversité et Fonctionnement écologique dans les écosystèmes estuariens : vers des indicateurs fonctionnels des changements globaux Jérémy Lobry Sciences de l'environnement. HDR Écologie évolutive, fonctionnelle et des communautés, Université de Bordeaux, 2016 Habilitation à diriger des recherches tel-02604940v1

	MOOC Biodiversité continentale : rivières et forêts Jérémy Lobry , Eric Rochard , T. Datry , Christian Chauvin , Marion Gosselin France. 2015 Lectures hal-02601549v1

Jérémy LOBRY

Presentation

Publications

Cross-basin and cross-taxa patterns of marine community tropicalization and deborealization in warming European seas

Linking individual experiments and multiscale models to simulate physiological perturbations on aquatic food webs

Modeling the impact of floating offshore wind turbines on marine food webs in the Gulf of Lion, France

Assessing food limitation for marine juvenile fishes in coastal nurseries using a bioenergetic approach

ESCROpath , a Bayesian mixing model to quantify diets and trophic flows in aquatic food webs

Contrasting impacts of climate change on connectivity and larval recruitment to estuarine nursery areas

Interpretation of interannual variability in long-term aquatic ecological surveys

Dietary bioaccumulation of persistent organic pollutants in the common sole Solea solea in the context of global change. Part 1: Revisiting parameterisation and calibration of a DEB model to consider inter-individual variability in experimental and natural conditions

Dietary bioaccumulation of persistent organic pollutants in the common sole Solea solea in the context of global change. Part 2: Sensitivity of juvenile growth and contamination to toxicokinetic parameters uncertainty and environmental conditions variability in estuaries

Major biomass fluctuations in lake food webs – An example in the peri-alpine Lake Annecy

Temporal variations of perfluoroalkyl substances partitioning between surface water, suspended sediment, and biota in a macrotidal estuary

EStimating Contaminants tRansfers Over Complex food webs (ESCROC): An innovative Bayesian method for estimating POP's biomagnification in aquatic food webs

Assessing the ecological status of an estuarine ecosystem: linking biodiversity and food-web indicators

Global Changes Jeopardize the Trophic Carrying Capacity and Functioning of Estuarine Ecosystems

Environmental drivers of taxonomic, functional and phylogenetic diversity (alpha, beta and gamma components) in estuarine fish communities

Nekton communities of tidally restored marshes: A whole-estuary approach

A generic method to assess species exploratory potential under climate change

Influence of intertidal seascape on the functional structure of fish assemblages: Implications for habitat conservation in estuarine ecosystems

Beyond classic ecological assessment: The use of functional indices to indicate fish assemblages sensitivity to human disturbance in estuaries

Influence of intertidal seascape on the functional structure of fish assemblages: Implications for habitat conservation in estuarine ecosystems

Change in fish functional diversity and assembly rules in the course of tidal marsh restoration

Evidence for the Trophic Transfer of Perfluoroalkylated Substances in a Temperate Macrotidal Estuary

Fish communities in the Anthropocene: detecting drivers of changes in the deep peri-alpine Lake Geneva

L'halieutique ou l'exploitation des ressources vivantes aquatiques : une science protéiforme

How does climate change make fish late for dinner?

Toward a phenological mismatch in estuarine pelagic food web?

Abrupt shifts in the Gironde fish community: an indicator of ecological changes in an estuarine ecosystem

Can analysis of Platichthys flesus otoliths provide relevant data on historical metal pollution in estuaries? Experimental and in situ approaches

Estuarine habitats structure zooplankton communities: Implications for the pelagic trophic pathways

From species distributions to ecosystem structure and function: A methodological perspective

Evaluating ecosystem-level anthropogenic impacts in a stressed transitional environment: The case of the Seine estuary

The need for a protean fisheries science to address the degradation of exploited aquatic ecosystems

Feeding Habitats, Connectivity and Origin of Organic MatterSupporting Fish Populations in an Estuary with a ReducedIntertidal Area Assessed by Stable Isotope Analysis

Les poissons de l’estuaire de la Gironde : 30 ans de changements, et maintenant ?

Incorporating food-web parameter uncertainty into Ecopath-derived ecological network indicators

A new modeling approach to define marine ecosystems food-web status with uncertainty assessment

The mosaic of habitats of the Seine estuary: Insights from food-web modelling and network analysis

Subproblem finite-element refinement of homogenized dielectric layers in wound inductors for accurate local stresses computation

Hydroacoustics as a relevant tool to monitor fish dynamics in large estuaries

Reaction of an estuarine food web to disturbance: Lindeman's perspective

Reaction of an estuarine food web to disturbance: Lindeman’s perspective

A fish-based index of estuarine ecological quality incorporating information from both scientific fish survey and experts knowledge

Strength and time lag of relationships between human pressures and fish-based metrics used to assess ecological quality of estuarine systems

Ecosystem status and functioning: Searching for rules of thumb using an intersite comparison of food-web models of Northeast Atlantic continental shelves

Seasonal succession of estuarine fish, shrimps, macrozoobenthos and plankton: physico-chemical and trophic influence. The ironde estuary as a case study

An ecosystem approach for the assessment of fisheries impacts on marine top predators: the Bay of Biscay case study

Trophic functioning of coastal ecosystems along an anthropogenic pressure gradient: A French case study with emphasis on a small and low impacted estuary

A Bayesian framework to objectively combine metrics when developing stressor specific multimetric indicator

Increase of marine juvenile fish abundances in the middle Gironde estuary related to warmer and more saline waters, due to global changes

Impact of global warming on European tidal estuaries: some evidence of northward migration of estuarine fish species

Lower trophic levels and detrital biomass control the Bay of Biscay continental shelf food web: Implications for ecosystem management

A future for marine fisheries in Europe (Manifesto of the Association Francaise d'Halieumetrie)

Regard critique sur la mise en place d'indicateurs d'évaluation de l'efficacité des aires marines protégées

Regard critique sur la mise en place d’indicateurs d’évaluation de l’efficacité des aires marines protégées

Impact of warming on abundance and occurrence of flatfish populations in the Bay of Biscay (France)

Exploitation of trophic resources by fish under stressful estuarine conditions

Functional diversity in European estuaries: Relating the composition of fish assemblages to the abiotic environment

Development of a fish-based index to assess the ecological quality of transitional waters: The case of French estuaries

Gyroscopic magnetic levitation: an original design procedure based on the finite element method

Fish under influence: a macroecological analysis of relations between fish species richness and environmental gradients among European tidal estuaries

Assessment of the ecological status of coastal areas and estuaries in France, using multiple fish-based indicators: a comparative analysis on the Vilaine estuary

Anthropogenic disturbance on nursery function of estuarine areas for marine species

Dealing with uncertainly in qualitative models with a semi-quantitative approach based on simulations: applications to the Gironde estuarine food web (France)

From detritus to man: diversity and stability of an estuarine trophic network

Facing the necessity of describing estuarine ecosystems: a review of food web ecology study techniques

From seasonal patterns to a reference situation in an estuarine environment: Example of the small fish and shrimp fauna of the Gironde estuary (SW France)

L'échantillonnage de la diversité piscicole en estuaires : stratégie et représentativité dans le contexte de la Directive cadre européenne sur l'eau

La biodiversité spécifique des ressources démersales du plateau continental guinéen : utilisation d'indices classiques pour un diagnostic sur l'évolution de l'écosystème

Structure of the Gironde estuarine fish assemblages: a comparison of European estuaries perspective

Les cortèges ichtyologiques de l'estuaire de la Gironde. Réflexion sur l'établissement d'une situation de référence en vue d'identifier les perturbations

Fish distribution's shifts due to climate change in the Northeast Atlantic: using a hierarchical filtering approach on marine-estuarine opportunist species|

Major biomass fluctuations in lake food webs – An example in the peri-alpine Lake Annecy

What drives the interannual variability in fish-population time series?

What drives the interannual variability in fish-population time series?

Habitat value of tidally restored marshes for fish and macrocrustaceans: feedback from two study cases in the Gironde estuary

Approche multicritère de l’état de santé des écosystèmes estuariens : exemple de la Seine

La marinisation de l'estuaire de la Gironde