Jorge Moura de Sousa

Documents

Publications

Shuttling, swapping and mixing: the rapid modular evolution of antiviral repertoires in temperate phages and their satellites

Jorge Moura de Sousa , Florence Depardieu , Marie Touchon , Raphaël Laurenceau , Kristen Curry et al.

2026

Pré-publication, Document de travail pasteur-05651560v1

Logan: Planetary-Scale Genome Assembly Surveys Life’s Diversity

Rayan Chikhi , Téo Lemane , Raphaël Loll-Krippleber , Mercè Montoliu-Nerin , Brice Raffestin et al.

2025

Pré-publication, Document de travail hal-05446815v1

When bacteria are phage playgrounds: interactions between viruses, cells and mobile genetic elements

Eugen Pfeifer , Jorge A Moura de Sousa , Marie Touchon , Eduardo Rocha

2022

Pré-publication, Document de travail hal-03824239v1

Competition between phage-resistance mechanisms determines the outcome of bacterial co-existence

Olaya Rendueles , Jorge A Moura de Sousa , Eduardo P.C. Rocha

2022

Pré-publication, Document de travail pasteur-03795539v1

Genome diversification via genetic exchanges between temperate and virulent bacteriophages

Jorge A. Moura de Sousa , Eugen Pfeifer , Marie Touchon , Eduardo P. C. Rocha

2020

Pré-publication, Document de travail hal-02988810v1

Shuttling, swapping, and mixing: the rapid modular evolution of antiviral repertoires in temperate phages and their satellites

Jorge Moura de Sousa , Florence Depardieu , Marie Touchon , Raphaël Laurenceau , Kristen D Curry et al.

Nucleic Acids Research, 2026, 54 (17), pp.gkag898. ⟨10.1093/nar/gkag898⟩

Article dans une revue hal-05764846v1

Incomplete lytic cycle of a widespread Bacteroides bacteriophage leads to the formation of defective viral particles

Sol Vendrell-Fernández , Beatriz Beamud , Yasmina Abou Haydar , Jorge A Moura de Sousa , Julien Burlaud-Gaillard et al.

PLoS Biology, 2025, 23 (3), pp.e3002787. ⟨10.1371/journal.pbio.3002787⟩

Article dans une revue pasteur-05115385v1

Hijackers, hitchhikers, or co-drivers? The mysteries of mobilizable genetic elements

Manuel Ares-Arroyo , Charles Coluzzi , Jorge A Moura de Sousa , Eduardo P C Rocha

PLoS Biology, 2024, 22 (8), pp.e3002796. ⟨10.1371/journal.pbio.3002796⟩

Article dans une revue pasteur-04778737v2

Phage-inducible chromosomal minimalist islands (PICMIs), a novel family of small marine satellites of virulent phages

Rubén Barcia-Cruz , David Goudenège , Jorge Moura de Sousa , Damien Piel , Martial Marbouty et al.

Nature Communications, 2024, 15 (1), pp.664. ⟨10.1038/s41467-024-44965-1⟩

Article dans une revue hal-04413133v1

A widespread family of phage-inducible chromosomal islands only steals bacteriophage tails to spread in nature

Nasser Alqurainy , Laura Miguel-Romero , Jorge Moura de Sousa , John Chen , Eduardo P.C. Rocha et al.

Cell Host & Microbe, 2023, 31 (1), pp.69-82.e5. ⟨10.1016/j.chom.2022.12.001⟩

Article dans une revue pasteur-03952543v2

Horizontal gene transfer among host-associated microbes

Jorge Moura de Sousa , Marta Lourenço , Isabel Gordo

Cell Host & Microbe, 2023, 31 (4), pp.513 - 527. ⟨10.1016/j.chom.2023.03.017⟩

Article dans une revue hal-04604566v1

Competition between lysogenic and sensitive bacteria is determined by the fitness costs of the different emerging phage-resistance strategies

Olaya Rendueles , Jorge Am Moura de Sousa , Eduardo Pc Rocha

eLife, 2023, 12, pp.e83479. ⟨10.7554/eLife.83479⟩

Article dans une revue pasteur-04057813v1

Identification and characterization of thousands of bacteriophage satellites across bacteria

Jorge A Moura de Sousa , Alfred Fillol-Salom , José Penadés , Eduardo P.C. Rocha

Nucleic Acids Research, 2023, 51 (6), pp.2759-2777. ⟨10.1093/nar/gkad123⟩

Article dans une revue hal-03838678v2

Selfish, promiscuous, and sometimes useful: how mobile genetic elements drive horizontal gene transfer in microbial populations

Matthieu Haudiquet , Jorge A Moura de Sousa , Marie Touchon , Eduardo P. C. Rocha

Philosophical Transactions of the Royal Society of London. B (1887–1895), 2022, 377 (1861), pp.20210234. ⟨10.1098/rstb.2021.0234⟩

Article dans une revue pasteur-03684761v2

To catch a hijacker: abundance, evolution and genetic diversity of P4-like bacteriophage satellites

Jorge A Moura de Sousa , Eduardo P. C. Rocha

Philosophical Transactions of the Royal Society B: Biological Sciences, 2022, 377 (1842), pp.20200475. ⟨10.1098/rstb.2020.0475⟩

Article dans une revue pasteur-03684736v1

When bacteria are phage playgrounds: interactions between viruses, cells, and mobile genetic elements

Eugen Pfeifer , Jorge A Moura de Sousa , Marie Touchon , Eduardo Pc Rocha

Current Opinion in Microbiology, 2022, 70, pp.102230. ⟨10.1016/j.mib.2022.102230⟩

Article dans une revue hal-04604548v1

Causes and Consequences of Bacteriophage Diversification via Genetic Exchanges across Lifestyles and Bacterial Taxa

Jorge A Moura de Sousa , Eugen Pfeifer , Marie Touchon , Eduardo P. C. Rocha

Molecular Biology and Evolution, 2021, 38 (6), pp.2497-2512. ⟨10.1093/molbev/msab044⟩

Article dans une revue hal-03357362v1

Bacteria have numerous distinctive groups of phage-plasmids with conserved phage and variable plasmid gene repertoires

Eugen Pfeifer , Jorge A Moura de Sousa , Marie Touchon , Eduardo P. C. Rocha

Nucleic Acids Research, 2021, 49 (5), pp.2655-2673. ⟨10.1093/nar/gkab064⟩

Article dans une revue hal-03357369v1

Phylogenetic background and habitat drive the genetic diversification of Escherichia coli

Marie Touchon , Amandine Perrin , Jorge A Moura de Sousa , Belinda Vangchhia , Samantha Burn et al.

PLoS Genetics, 2020, 16 (6), pp.e1008866. ⟨10.1371/journal.pgen.1008866⟩

Article dans une revue pasteur-02866790v2

Environmental structure drives resistance to phages and antibiotics during phage therapy and to invading lysogens during colonisation

Jorge A Moura de Sousa , Eduardo P C Rocha

Scientific Reports, 2019, 9 (1), pp.3149. ⟨10.1038/s41598-019-39773-3⟩

Article dans une revue pasteur-02098383v1

Bacteriophages benefit from generalized transduction

Alfred Fillol-Salom , Alsaadiid Ahlam , Jorge Moura de Sousa , Li Zhong , Kevin R Fosterid et al.

PLoS Pathogens, 2019, ⟨10.1371/journal.ppat.1007888⟩

Article dans une revue hal-02329705v1

Bacteriophages benefit from generalized transduction

Alfred Fillol-Salom , Ahlam Alsaadi , Jorge A Moura de Sousa , Li Zhong , Kevin R Foster et al.

PLoS Pathogens, 2019, 15 (7), pp.e1007888. ⟨10.1371/journal.ppat.1007888⟩

Article dans une revue pasteur-04076056v1

Embracing the enemy: the diversification of microbial gene repertoires by phage-mediated horizontal gene transfer

Marie Touchon , Jorge A Moura de Sousa , Eduardo P. C. Rocha

Current Opinion in Microbiology, 2017, 38, pp.66-73. ⟨10.1016/j.mib.2017.04.010⟩

Article dans une revue pasteur-03111100v1

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