CV de Juliana Pipoli da Fonseca

Juliana Pipoli da Fonseca

18

Documents

Publications

Publications

	Segmented filamentous bacteria are worldwide human gut commensals Shashi Kiran , Ana Raquel Cruz , Alice Daniau , Bing Ma , Martial Marbouty et al. Nature Communications, 2026, 17 (1), pp.4174. ⟨10.1038/s41467-026-70010-4⟩ Article dans une revue hal-05673809v1
	LORA: a polymorphic multi-sample long read assembly pipeline Dimitri Desvillechabrol , Rania Ouazahrou , Juliana Pipoli da Fonseca , Gerald Späth , Thomas Cokelaer NAR Genomics and Bioinformatics, 2026, 8 (2), pp.lqag062. ⟨10.1093/nargab/lqag062⟩ Article dans une revue hal-05677848v1
	The cell wall lipoprotein CD1687 acts as a DNA binding protein during deoxycholate-induced biofilm formation in Clostridioides difficile Emile Auria , Lise Hunault , Patrick England , Marc Monot , Juliana Pipoli da Fonseca et al. npj Biofilms and Microbiomes, 2023, 9 (1), pp.24. ⟨10.1038/s41522-023-00393-5⟩ Article dans une revue pasteur-04099827v1
	Transcriptomic analysis of sorted lung cells revealed a proviral activity of the NF-κB pathway toward SARS-CoV-2 Anvita Bhargava , Ugo Szachnowski , Maxime Chazal , Dominika Foretek , Vincent Caval et al. iScience, 2023, 26 (12), pp.108449. ⟨10.1016/j.isci.2023.108449⟩ Article dans une revue pasteur-04455549v1
	Core genome sequencing and genotyping of Leptospira interrogans in clinical samples by target capture sequencing Linda Grillova , Thomas Cokelaer , Jean-François Mariet , Juliana Pipoli da Fonseca , Mathieu Picardeau BMC Infectious Diseases, 2023, 23 (1), pp.157. ⟨10.1186/s12879-023-08126-x⟩ Article dans une revue pasteur-04120601v1
	Comparative study of innate immune gene landscape in bat cells Sophie-Marie Aicher , Amandine Chantharath , Etienne Kornobis , Niklas Endres , Quang Dinh Tran et al. Virologie, 2023, 27 (3), pp.206-207. ⟨10.1684/vir.2023.1005⟩ Article dans une revue pasteur-04184139v1
	SARS‐CoV‐2‐related bat virus behavior in human‐relevant models sheds light on the origin of COVID‐19 Sarah Temmam , Xavier Montagutelli , Cécile Herate , Flora Donati , Béatrice Regnault et al. EMBO Reports, 2023, 24 (4), pp.e56055. ⟨10.15252/embr.202256055⟩ Article dans une revue pasteur-04072738v1
	JC Polyomavirus whole genome sequencing at the single molecule level reveals emerging neurotropic populations in Progressive Multifocal Leucoencephalopathy Anne-Sophie L’honneur , Juliana Pipoli da Fonseca , Thomas Cokelaer , Flore Rozenberg Journal of Infectious Diseases, 2022, 226 (7), pp.1151-1161. ⟨10.1093/infdis/jiab639⟩ Article dans une revue pasteur-03509651v1
	Capturing SARS-CoV-2 from patient samples with low viral abundance: a comparative analysis Juliana Pipoli da Fonseca , Etienne Kornobis , Elodie Turc , Vincent Enouf , Laure Lemée et al. Scientific Reports, 2022, 12 (1), pp.19274. ⟨10.1038/s41598-022-23422-3⟩ Article dans une revue pasteur-03884256v1
	SHLD1 is dispensable for 53BP1-dependent V(D)J recombination but critical for productive class switch recombination Estelle Vincendeau , Wenming Wei , Xuefei Zhang , Cyril Planchais , Wei Yu et al. Nature Communications, 2022, 13 (1), pp.3707. ⟨10.1038/s41467-022-31287-3⟩ Article dans une revue pasteur-04120567v1
	Broad spectrum compounds targeting early stages of rabies virus (RABV) infection Sabrina Kali , Corinne Jallet , Saliha Azebi , Thomas Cokelaer , Juliana Pipoli da Fonseca et al. Antiviral Research, 2021, 188, pp.105016. ⟨10.1016/j.antiviral.2021.105016⟩ Article dans une revue pasteur-03281530v1
	Investigating the role of the carbon storage regulator A (CsrA) in Leptospira spp. Theerapat Phoka , Lenka Fule , Juliana Pipoli da Fonseca , Thomas Cokelaer , Mathieu Picardeau et al. PLoS ONE, 2021, 16 (12), pp.e0260981. ⟨10.1371/journal.pone.0260981⟩ Article dans une revue pasteur-03509058v1
	Chaperoning 5S RNA assembly Clément Madru , Simon Lebaron , Magali Blaud , Lila Delbos , Juliana Pipoli da Fonseca et al. Genes and Development, 2015, 29 (13), pp.1432-1446. ⟨10.1101/gad.260349.115⟩ Article dans une revue hal-02884389v1

	Horseshoe bats from Southeast Asia host a high diversity of Sarbecoviruses, including close ancestors of SARS-CoV-2 Sarah Temmam , Khamsing Vongphayloth , Tran Cong Tu , Béatrice Regnault , Massimiliano Bonomi et al. 8th World One Health Congress, Sep 2024, Cape Town / Le Cap, South Africa Poster de conférence pasteur-04727508v1

	KozakExplorer: an interactive framework for genome-wide Kozak sequence analysis Thomas Cokelaer , Ana Maria Santi , Juliana Pipoli Da Fonseca , Gerald Späth 2026 Pré-publication, Document de travail (preprint/prepublication) hal-05677818v1
	Initiation codon context governs translation-coupled mRNA decay and coordinated expression in the human parasite Leishmania Ana Maria Murta Santi , Thomas Cokelaer , Juliana Pipoli da Fonseca , Paul Jenkins , Elena Tikhonova et al. 2026 Pré-publication, Document de travail (preprint/prepublication) hal-05680648v1
	Genetic introgression and transcriptomic plasticity are associated with enhanced Leishmania infantum pathogenicity causing human cutaneous leishmaniasis in Tunisia Ana Maria Murta Santi , Blaise Li , Laura Piel , Juliana Pipoli da Fonseca , Delphine Bacq-Daian et al. 2026 Pré-publication, Document de travail (preprint/prepublication) hal-05677809v1
	Transcriptomic landscapes of SARS-CoV-2-infected and bystander lung cells reveal a selective upregulation of NF-κB-dependent coding and non-coding proviral transcripts Ugo Szachnowski , Anvita Bhargava , Maxime Chazal , Dominika Foretek , Sophie-Marie Aicher et al. 2022 Pré-publication, Document de travail hal-03853913v1

Chargement...