Publications
Publications
Les modèles in silicoStructure des aliments et effets nutritionnels, Editions Quae, 2013, Synthèses |
Impact of breeding methods on microbiota composition, Campylobacter contamination, and its dynamics on broiler carcasses during refrigerated storageIAFP European Symposium, May 2025, Madrid (ES), Spain |
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Exploring co-occurrences among bacterial communities in broiler meat and the foodborne pathogen Campylobacter for enhanced food safetyIAFP European Symposium, Apr 2024, Genève, Switzerland |
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Pest detection from a biology-informed inverse problem and pheromone sensorsDSABNS 2024 - 15th Conference on Dynamical Systems Applied to Biology and Natural Sciences, Feb 2024, Lisbonne, Portugal |
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Accelerate gut microbiota recovery to enhance resistance to colonisation against vancomycin-resistant Enterococci (VRE)6th International Conference on Enterococci (ICE-6), Sep 2023, Porto, Portugal |
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Modelling interactions between host and gut microbiota.ECMTB 2022 - European Conference on Mathematical and Theoretical Biology, Sep 2022, Heidelberg, Germany |
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Interactions hôte microbiote et dynamique écologique du microbiote intestinal humain et animal: quelques exemple de modélisation et d’analyse de données.21eme Journée Calcul Scientifique et Modélisation Mathématique d’Amiens,, LAMFA, Université de Picardie Jules Verne, Jun 2022, Amiens, France |
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Host microbiota interactions and barrier effect: some examples of modeling and data analysis for the gut microbiotaWorshop Mathématiques et Microbiote, Nov 2021, Besancon, France |
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Identification de la fraction active des bactéries du microbiote améliorant la résistance à la colonisation intestinale contre les entérocoques résistants à la vancomycineWebinaire MICA-INRAE : Comprendre et valoriser les communautés microbiennes, Sep 2020, Distanciel, France |
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A model coupling microbial physiology, spatial heterogeneity and fluid mechanics to investigate factors impacting the microbiota spatial organization in the human colon.Workshop on Transport in the digestive tract : experiments, modeling, applications to microbiology,, http://www.normalesup.org/~loverdo/workshop.html, Oct 2020, Paris, France |
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SIMULATION OF A DAMPED NONLINEAR BEAM BASED ON MODAL DECOMPOSITION AND VOLTERRA SERIES26th International Congress on Sound and Vibration, Jul 2019, Montréal, Canada |
Modelling aggregated functional traits from metagenomics data Application to dietary fiber degradation in the human gut.Recent Computational Advances in Metagenomics (RCAM’19), Sep 2019, Paris, France |
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Parameter estimation for dynamical systems using an FDA approach11th International Conference of the ERCIM WG on Computational and Methodological Statistics (CMStatistics 2018), Dec 2018, Pise, Italy |
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Fusion detection in time-lapse microscopy images: application to lipid droplets coalescence in plant seeds6th IFAC Conference on Foundations of Systems Biology in Engineering, Oct 2016, Magdeburg, Germany. pp.6, ⟨10.1016/j.ifacol.2016.12.132⟩ |
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Structuring food for improving nutrient bioavailability: the case of dairy gels29. EFFoST International Conference, Nov 2015, Athènes, Greece |
Modeling Fiber Degradation by Human Gut MicrobiomeMathematical Models in Ecology and Evolution (MMEE 2015), Jun 2015, Paris, France |
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Controlling a non-linear epidemic PDE model with delayed detection: a model simplification approach13th European Control Conference (ECC), 2014, Jun 2014, Strasbourg, France. pp.1127 - 1132, ⟨10.1109/ECC.2014.6862572⟩ |
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Tracking the in vivo release of bioactive peptides in the gut during digestion: Mass spectrometry peptidomic characterization of effluents collected in the gut of dairy matrix fed mini-pigs3. Foodomics Conference: Foodomics a New Comprehensive Approach to Food and Nutrition, May 2014, Rome, Italy. pp.147-156, ⟨10.1016/j.foodres.2014.02.015⟩ |
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Metagenomics data analysis using a latent block model: application to plant-microbial communities interactions in the rhizosphere .ECMTB14 - European Conference on Mathematical and Theoretical Biology, Jun 2014, Gôteborg, Sweden. pp.1 |
Reduction of metabolic models by polygons optimization method applied to Bioethanol production with co-substrates19th World Congress of the International-Federation-of-Automatic-Control, Aug 2014, Cape Town, South Africa. pp.6 |
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Metagenomic data analysis and integration in a functional population model of fiber degradation by the human intestinal microbiotaECMTB14 - 9. European Conference on Mathematical and Theoretical Biology, Jun 2014, Gôteborg, Sweden. 1 p |
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Mathematical Modelling of Milk Proteins Digestion Dynamics16th IFAC Symposium on System Identification, Jul 2012, Brussels, Belgium. 4 p., ⟨10.3182/20120711-3-BE-2027.00119⟩ |
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The dynamics of oil bodies in A. thaliana seeds :A mathematical model of biogenesis and coalescenceICMB 2012 - VIII International Conference on Mathematical Biology, Labo/service de l'auteur, Ville service., Apr 2012, Paris, France. pp.763-768 |
Understanding how the structure of dairy matrices effects protein hydrolysis in the gastrointestinal tract7th International Conference on Predictive Modelling of Food Quality and Safety (ICPMF7), Sep 2011, Dublin, Ireland |
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Mathematical analysis and numerical simulations of a generic population dynamics modelICIAM 2011 -- 7th International Congress on Industrial and Applied Mathematics, Labo/service de l'auteur, Ville service, Pays service., Jul 2011, Vancouver, Canada. pp.1 |
The effect of the matrix structure on the digestion of milk proteins: Mathematical modelling2nd Management Committee & Working Group Meetings of COST ACTION FA1005, Institut National de Recherche Agronomique (INRA). UMR Science et Technologie du Lait et de l'Oeuf (1253)., Oct 2011, Le Croisic, France |
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Identiability analysis of an epidemiological PDE model19. International Symposium on Mathematical Theory of Networks and Systems (MTNS), Jul 2010, Budapest, Hungary |
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Understanding how the structure of dairy matrices affects protein hydrolysis in the gastrointestinal tractBiopolymères' 2010 Matrices alimentaires : Construction, déconstruction, propriétés sensorielles et nutritionnelles, Institut National de Recherche Agronomique (INRA). UMR Science et Technologie du Lait et de l'Oeuf (1253)., Dec 2010, Le Croisic, France |
Convergence of series expansions for some infinite dimensional nonlinear systems4th IFAC Symposium on System, Structure and Control (SSSC), Sep 2010, Ancona, Italy. pp.1-6 |
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Computation of convergence radius and error bounds of Volterra series for multiple input systems with an analytic nonlinearity in stateIEEE Conference on Decision and Control, Dec 2010, Atlanta, États-Unis. pp.1-6 |
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Motion Planning for an integro-PDE transport-reaction modelCDPS'09, workshop on Control of Distributed Parameter Systems, Jul 2009, Toulouse, France |
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IDEAS: a parameter identification toolbox with symbolic analysis of uncertainty and its application to biological modelling15. IFAC Symposium on System Identication (SYSID 2009), Jul 2009, Saint Malo, France. ⟨10.3182/20090706-3-FR-2004.00211⟩ |
Computation of convergence radius and error bounds of Volterra series for single input systems with a polynomial nonlinearity.CDC 48th IEEE Conference on Decision and Control, Dec 2009, Shangai, China. pp.1-6 |
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Convergence radius and guaranteed error bound for the Volterra series expansion of finite dimensional quadratic systemsMediterranean Conference on Control and Automation, Jun 2008, Ajaccio, Corsica, France, France. pp.741-746 |
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Using singular perturbations to reduce the dimension of an epidemiological model: application to BVDV spread within a cattle herdMarrakech International Conference et Workshop on Mathematical Biololy, Jan 2008, Marrakech, Morocco |
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Modelling and identification of in vitro homoacetogenesis by human-colon bacteria16. Mediterranean Conference on Control and Automation, 2008, Ajaccio, France |
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Epidemiological modelling for managed herds2. Conference on Computational and Mathematical Population Dynamics (CMPD2), Jul 2007, Campinas, Brazil |
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Human colon: a complex bioreactor. Conceptual modelling for the anaerobic digestion of the functional trophic chain11. World Congress on Anaerobic Digestion, Sep 2007, Brisbane, Australia. 6 p |
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Parameter identifiability and identification of a hierarchical epidemiological model2. Conference on Computational and Mathematical Population Dynamics (CMPD2), Jul 2007, Campinas, Brazil |
Parameter identification for a PDE model representing scrapie transmission in a sheep flock44th IEEE Conference on Decision and Control, Dec 2005, Seville, Spain. pp.1607-1612, ⟨10.1109/CDC.2005.1582388⟩ |
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Comparaison de 2 tests d'identifiabilité structurelle, application au séchage du riz10. Congrès de la Société Française de Génie des Procédés (SFGP), 20-22 septembre, Sep 2005, Toulouse, France |
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Motion Planning for a Linearized Korteweg-De Vries Equation with Boundary Control15th IFAC World Congress, Jul 2002, Barcelona, Spain. pp.225-230, ⟨10.3182/20020721-6-ES-1901.00199⟩ |
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Study of the numerical method for an inverse problem of a simplified intestinal cryptInternational Conference on Control and Related Fields (CRF 2023)., Mar 2023, Sevilla (Spain), Spain. Springer Nature Switzerland, pp.175-195, 2024, Trends in Mathematics, 978-3-031-62265-6. ⟨10.1007/978-3-031-62265-6_9⟩ |