BL

Béatrice Laroche

46
Documents
Affiliation actuelle
  • Mathématiques et Informatique Appliquées du Génome à l'Environnement [Jouy-En-Josas] (MaIAGE)
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Présentation


Publications

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Publications

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The immune response modulated by inoculation of commensal bacteria at birth impacts the gut microbiota and prevents Salmonella colonization

Florent Kempf , Rosanna Drumo , Anne-Marie Chaussé , Pierrette Menanteau , Tereza Kubasova et al.
Gut microbes, 2025, 17 (1), pp.2474151. ⟨10.1080/19490976.2025.2474151⟩
Article dans une revue hal-05004820 v1
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Biology-Informed inverse problems for insect pests detection using pheromone sensors

Thibault Malou , Nicolas Parisey , Katarzyna Adamczyk-Chauvat , Elisabeta Vergu , Béatrice Laroche et al.
Peer Community Journal, 2025, 5, pp.e19. ⟨10.24072/pcjournal.520⟩
Article dans une revue hal-04982331 v1

A consortium of seven commensal bacteria promotes gut microbiota recovery and strengthens ecological barrier against vancomycin-resistant enterococci

Alan Jan , Perrine Bayle , Nacer Mohellibi , Clara Lemoine , Frédéric Pepke et al.
Microbiome, 2025, 13 (1), pp.129. ⟨10.1186/s40168-025-02127-5⟩
Article dans une revue hal-05236197 v1

Pink discoloration defects associated with microbial structure and metabolome changes in commercial bloomy cheeses

Françoise Irlinger , Christine Keribin , Anne-Sophie Sarthou , Béatrice Laroche , Sandra Helinck
International Journal of Food Microbiology, 2025, 442, pp.111363. ⟨10.1016/j.ijfoodmicro.2025.111363⟩
Article dans une revue hal-05193253 v1

A consortium of seven commensal bacteria promotes gut microbiota recovery and strengthens ecological barrier against vancomycin-resistant enterococci

Alan Jan , Perrine Bayle , Nacer Mohellibi , Clara Lemoine , Frédéric Pepke et al.
Microbiome, 2025, 13 (1), pp.129. ⟨10.1186/s40168-025-02127-5⟩
Article dans une revue hal-05086353 v1
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A mechanistic modelling approach of the host–microbiota interactions to investigate beneficial symbiotic resilience in the human gut

Marie Haghebaert , Béatrice Laroche , Lorenzo Sala , Stanislas Mondot , Joël Doré
Journal of the Royal Society Interface, 2024, 21 (215), ⟨10.1098/rsif.2023.0756⟩
Article dans une revue hal-04623171 v1
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Design of a proteolytic module for improved metabolic modeling of Bacteroides caccae

Amandine Paulay , Ghjuvan M Grimaud , Raphaël Caballero , Béatrice Laroche , Marion Leclerc et al.
mSystems, 2024, 9 (4), ⟨10.1128/msystems.00153-24⟩
Article dans une revue hal-04540116 v1
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Extensive multivariate dataset characterizing bacterial community diversity and Campylobacter contamination level in a large number of conventional broilers carcasses after air chilling and refrigerated storage

Sophie Hautefeuille , Raouf Tareb , Agnès Bouju-Albert , Boris Misery , Béatrice Laroche et al.
Data in Brief, 2024, 56, pp.110858. ⟨10.1016/j.dib.2024.110858⟩
Article dans une revue hal-04778036 v1
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Four functional profiles for fibre and mucin metabolism in the human gut microbiome

Simon Labarthe , Sandra Plancade , Sébastien Raguideau , Florian Plaza Oñate , Emmanuelle Le Chatelier et al.
Microbiome, 2023, 11 (1), pp.231. ⟨10.1186/s40168-023-01667-y⟩
Article dans une revue hal-03918193 v2
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A PDMP model of the epithelial cell turn-over in the intestinal crypt including microbiota-derived regulations

Léo Darrigade , Marie Haghebaert , Claire Cherbuy , Simon Labarthe , Béatrice Laroche
Journal of Mathematical Biology, 2022, 84 (7), pp.1-67. ⟨10.1007/s00285-022-01766-8⟩
Article dans une revue hal-03379023 v2
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Single seed microbiota: assembly and transmission from parent plant to seedling

Guillaume Chesneau , Béatrice Laroche , Anne Préveaux , Coralie Marais , Martial Briand et al.
mBio, 2022, 13 (6), pp.0164822. ⟨10.1128/mbio.01648-22⟩
Article dans une revue hal-03834661 v1
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Input/output reduced model of a damped nonlinear beam based on Volterra series and modal decomposition with convergence results

Thomas Hélie , Béatrice Laroche
Nonlinear Dynamics, 2021, 105 (1), pp.515-540. ⟨10.1007/s11071-021-06529-6⟩
Article dans une revue hal-03306198 v1
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Physiologically Based Modeling of Food Digestion and Intestinal Microbiota: State of the Art and Future Challenges. An INFOGEST Review

Steven Le Feunteun , Ahmed Al-Razaz , Matthijs Dekker , Erwin George , Béatrice Laroche et al.
Annual Review of Food Science and Technology, 2021, 12, pp.16/1-16/19. ⟨10.1146/annurev-food-070620-⟩
Article dans une revue (article de synthèse) hal-03117715 v1

Modelling the growth of Staphylococcus aureus on cooked broccoli under isothermal conditions

Caroline Isabel Kothe , Béatrice Laroche , Patrícia da Silva Malheiros , Eduardo Cesar Tondo
Brazilian Journal of Microbiology, 2021, 52 (3), pp.1565-1571. ⟨10.1007/s42770-021-00482-7⟩
Article dans une revue hal-03258770 v1
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Exploring the Bacterial Impact on Cholesterol Cycle: A Numerical Study

Mélanie Bourgin , Simon Labarthe , Aicha Kriaa , Marie Lhomme , Philippe Gérard et al.
Frontiers in Microbiology, 2020, 11, pp.1121. ⟨10.3389/fmicb.2020.01121⟩
Article dans une revue hal-02863236 v1
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A Multi-Scale Epidemic Model of Salmonella Infection With Heterogeneous Shedding

Simon Labarthe , Béatrice Laroche , Thi Nhu Tao Nguyen , Bastien Polizzi , Florian Patout et al.
ESAIM: Proceedings and Surveys, 2020, 67, pp.261-284. ⟨10.1051/proc/202067015⟩
Article dans une revue hal-02043742 v2
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Analysis and numerical simulation of an inverse problem for a structured cell population dynamics model

Frédérique Clément , Béatrice Laroche , Frédérique Robin
Mathematical Biosciences and Engineering, 2019, 16 (4), pp.3018-3046. ⟨10.3934/mbe.2019150⟩
Article dans une revue hal-02154588 v1
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A mathematical model to investigate the key drivers of the biogeography of the colon microbiota.

Simon Labarthe , Bastien Polizzi , Thuy Phan , Thierry Goudon , Magali Ribot et al.
Journal of Theoretical Biology, 2019, 462 (7), pp.552-581. ⟨10.1016/j.jtbi.2018.12.009⟩
Article dans une revue hal-01761191 v3
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Signatures of ecological processes in microbial community time series

Karoline Faust , Franziska Bauchinger , Béatrice Laroche , Sophie de Buyl , Leo Lahti et al.
Microbiome, 2018, 6 (1), ⟨10.1186/s40168-018-0496-2⟩
Article dans une revue hal-01891496 v1
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Inferring Aggregated Functional Traits from Metagenomic Data Using Constrained Non-negative Matrix Factorization: Application to Fiber Degradation in the Human Gut Microbiota

Sébastien Raguideau , Sandra Plancade , Nicolas Pons , Marion Leclerc , Béatrice Laroche
PLoS Computational Biology, 2016, 12 (12), pp.1:29. ⟨10.1371/journal.pcbi.1005252⟩
Article dans une revue hal-01454674 v1

A mixture model for the dynamic of the gut mucus layer

Tamara El Bouti , Thierry Goudon , Simon Labarthe , Béatrice Laroche , Bastien Polizzi et al.
ESAIM: Proceedings, 2016, 55 (décembre), pp.111-130. ⟨10.1051/proc/201655111⟩
Article dans une revue hal-01421708 v2

A constrained NMF approach to analyze quantitative metagenomic data

Sébastien Raguideau , Béatrice Laroche , Marion Leclerc , Sandra Plancade
IFAC-PapersOnLine, 2016, 49 (26), pp.71-76. ⟨10.1016/j.ifacol.2016.12.105⟩
Article dans une revue hal-01455859 v1
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Challenges in microbial ecology: building predictive understanding of community function and dynamics.

Stefanie Widder , Rosalind J Allen , Thomas Pfeiffer , Thomas P Curtis , Carsten Wiuf et al.
The International Society of Microbiologial Ecology Journal, 2016, 10, pp.1-12. ⟨10.1038/ismej.2016.45⟩
Article dans une revue (article de synthèse) hal-01512087 v1

Threshold behaviour of a SI epidemiological model with two structuring variables

Béatrice Laroche , Antoine Perasso
Journal of Evolution Equations, 2015, 16 (2), ⟨10.1007/s00028-015-0303-5⟩
Article dans une revue hal-01353275 v1
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Impact of the dairy matrix structure on milk protein digestion kinetics: mechanistic modelling based on mini-pig [i]In vivo[/i] data

Steven Le Feunteun , Florence Barbe , Didier Remond , Olivia Ménard , Yann Le Gouar et al.
Food and Bioprocess Technology, 2014, 7 (4), pp.1099-1113. ⟨10.1007/s11947-013-1116-6⟩
Article dans une revue hal-01190322 v1

Computable convergence bounds of series expansions for infinite dimensional linear-analytic systems and application

Thomas Hélie , Béatrice Laroche
Automatica, 2014, 50 (9), pp.2334-2340. ⟨10.1016/j.automatica.2014.07.011⟩
Article dans une revue istex hal-01123435 v1

Acid and rennet gels exhibit strong differences in the kinetics of milk protein digestion and amino acid bioavailability

Florence Barbe , Olivia Ménard , Yann Le Gouar , Caroline Buffière , Marie-Hélène Famelart et al.
Food Chemistry, 2014, 143, pp.1-8. ⟨10.1016/j.foodchem.2013.07.100⟩
Article dans une revue hal-01190608 v1

Tracking the in vivo release of bioactive peptides in the gut during digestion: Mass spectrometry peptidomic characterization of effluents collected in the gut of dairy matrix fed mini-pigs

Florence Barbe , Steven Le Feunteun , Didier Remond , Olivia Ménard , Julien Jardin et al.
Food Research International, 2014, 63 (part B), pp.147-156. ⟨10.1016/j.foodres.2014.02.015⟩
Article dans une revue hal-02639243 v1

The heat treatment and the gelation are strong determinants of the kinetics of milk proteins digestion and of the peripheral availability of amino acids

Florence Barbe , Olivia Ménard , Yann Le Gouar , Caroline Buffière , Marie-Hélène Famelart et al.
Food Chemistry, 2013, 136 (3-4), pp.1203-1212. ⟨10.1016/j.foodchem.2012.09.022⟩
Article dans une revue istex hal-01019831 v1
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The dynamics of oil bodies in Arabidopsis thaliana seeds : a mathematical model of biogenesis and coalescence

Ghassen Trigui , Béatrice Laroche , Martine Miquel , Bertrand B. Dubreucq , Alain Trubuil
International Journal of Electrical, Computer, Energetic, Electronic and Communication Engineering, 2012, 64, pp.763-768
Article dans une revue hal-02643123 v1
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Kinetic modelling of lactate utilization and butyrate production by key human colonic bacterial species

Rafael Munoz Tamayo , Béatrice Laroche , Eric Walter , Joel Dore , Sylvia Duncan et al.
FEMS Microbiology Ecology, 2011, 76 (3), pp.615-624. ⟨10.1111/j.1574-6941.2011.01085.x⟩
Article dans une revue hal-00655932 v1

Computation of Convergence Bounds for Volterra Series of Linear-Analytic Single-Input Systems

Thomas Hélie , Béatrice Laroche
IEEE Transactions on Automatic Control, 2011, 56 (9), pp.2062-2072. ⟨10.1109/TAC.2010.2091435⟩
Article dans une revue hal-00655910 v1

Identifiability analysis of an epidemiological model in a structured population

Antoine Perasso , Béatrice Laroche , Yacine Chitour , Suzanne Touzeau
Journal of Mathematical Analysis and Applications, 2011, 374 (1), pp.154-165. ⟨10.1016/j.jmaa.2010.08.072⟩
Article dans une revue hal-00655939 v1

Mathematical modelling of carbohydrate degradation by human colonic microbiota

Rafael Munoz Tamayo , Béatrice Laroche , Eric Walter , Joel Doré , Marion Leclerc
Journal of Theoretical Biology, 2010, 266 (1), pp.189-20. ⟨10.1016/j.jtbi.2010.05.040⟩
Article dans une revue istex hal-00521148 v1
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Using singular perturbations to reduce an epidemiological model: Application to Bovine Viral Diarrhoea Virus within-herd spread

Sébastien Gaucel , Béatrice Laroche , Pauline Ezanno , Elisabeta Vergu , Suzanne Touzeau
Journal of Theoretical Biology, 2009, 258 (3), pp.426-436. ⟨10.1016/j.jtbi.2008.08.011⟩
Article dans une revue hal-00554504 v1

On the convergence of Volterra series of finite dimensional quadratic MIMO systems

Thomas Hélie , Béatrice Laroche
International Journal of Control, special issue in Honor of Michel Fliess 60 th-birthday, 2008, 81 (3), pp.358-370
Article dans une revue hal-01106316 v1
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Well-posedness of an epidemiological problem described by an evolution PDE

Antoine Perasso , Béatrice Laroche
ESAIM: Proceedings, 2008, 25, pp.29-43. ⟨10.1051/proc:082503⟩
Article dans une revue hal-02655874 v1

Flatness-Based Control of PER Protein Oscillations in a Drosophila Model

Béatrice Laroche , Claude Daniel
IEEE Transactions on Automatic Control, 2004, 49 (2), pp.175-183
Article dans une revue hal-02047147 v1

Motion planning for the heat equation

Béatrice Laroche , Philippe Martin , Pierre Rouchon
International Journal of Robust and Nonlinear Control, 2000
Article dans une revue hal-01958371 v1

Les modèles in silico

Béatrice Laroche , Steven Le Feunteun
Structure des aliments et effets nutritionnels, Editions Quae, 2013, Synthèses
Chapitre d'ouvrage hal-01195452 v1