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Patterns and drivers of diatom diversity and abundance in the global ocean
Juan Pierella Karlusich
,
Karen Cosnier
,
Lucie Zinger
,
Nicolas Henry
,
Charlotte Nef
et al.
Article dans une revue
hal-05138560v1
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Elusive tropical forest canopy diversity revealed through environmental DNA contained in rainwater
Lucie Zinger
,
Anne-Sophie Benoiston
,
Yves Cuenot
,
Céline Leroy
,
Eliane Louisanna
et al.
Article dans une revue
hal-05220607v1
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Mountain soil multitrophic networks shaped by the interplay between habitat and pedoclimatic conditions
Irene Calderón-Sanou
,
Marc Ohlmann
,
Tamara Münkemüller
,
Lucie Zinger
,
Mickael Hedde
et al.
Article dans une revue
hal-04409236v1
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Warming effects on lizard gut microbiome depend on habitat connectivity
Emma Fromm
,
Lucie Zinger
,
Félix Pellerin
,
Lucie Di Gesu
,
Staffan Jacob
et al.
Article dans une revue
hal-04558931v1
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Linking satellites to genes with machine learning to estimate phytoplankton community structure from space
Roy El Hourany
,
Juan Pierella Karlusich
,
Lucie Zinger
,
Hubert Loisel
,
Marina Lévy
et al.
Article dans une revue
hal-04582355v1
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Refocusing the microbial rare biosphere concept through a functional lens
Elena Litchman
,
Sébastien Villéger
,
Zinger Lucie
,
Jean-Christophe Auguet
,
Wilfried Thuiller
et al.
Article dans une revue
hal-04666177v1
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Beyond reaction norms: the temporal dynamics of phenotypic plasticity
Léonard Dupont
,
Mélanie Thierry
,
Lucie Zinger
,
Delphine Legrand
,
Staffan Jacob
Article dans une revue
hal-04284820v1
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Determinants of the vertical distribution of the phyllosphere differ between microbial groups and the epi- and endosphere
Heidy Schimann
,
Corinne Vacher
,
Sabrina Coste
,
Elianne Louisanna
,
Tania Fort
et al.
Article dans une revue
hal-04071067v1
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Molecular ecology of microbiomes in the wild: Common pitfalls, methodological advances and future directions
Nicholas M Fountain‐jones
,
Tatiana Giraud
,
Lucie Zinger
,
Holly Bik
,
Simon Creer
et al.
Article dans une revue
hal-04313134v1
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Pan-Arctic plankton community structure and its global connectivity
Federico M Ibarbalz
,
Nicolas Henry
,
Frédéric Mahé
,
Mathieu Ardyna
,
Adriana Zingone
et al.
Article dans une revue
hal-04267640v1
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A robust approach to estimate relative phytoplankton cell abundances from metagenomes
Juan José Pierella Karlusich
,
Eric Pelletier
,
Lucie Zinger
,
Fabien Lombard
,
Adriana Zingone
et al.
Article dans une revue
hal-03559541v1
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Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods
Paula Arribas
,
Carmelo Andújar
,
Kristine Bohmann
,
Jeremy Dewaard
,
Evan Economo
et al.
Article dans une revue
hal-03873057v1
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Energy and physiological tolerance explain multi‐trophic soil diversity in temperate mountains
Irene Calderón‐sanou
,
Lucie Zinger
,
Mickael Hedde
,
Camille Martinez‐almoyna
,
Amelie Saillard
et al.
Article dans une revue
hal-03716655v1
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Differential effects of soil trophic networks on microbial decomposition activity in mountain ecosystems
Camille Martinez-Almoyna
,
Amélie Saillard
,
Lucie Zinger
,
Clément Lionnet
,
Cindy Arnoldi
et al.
Article dans une revue
hal-03750503v1
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Decay of similarity across tropical forest communities: integrating spatial distance with soil nutrients
Guille Peguero
,
Miquel Ferrín
,
Jordi Sardans
,
Erik Verbruggen
,
Irene Ramírez-Rojas
et al.
Article dans une revue
hal-03411548v1
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Spatial turnover of fungi and partner choice shape mycorrhizal networks in epiphytic orchids
Rémi Petrolli
,
Lucie Zinger
,
Benoît Perez-Lamarque
,
Géromine Collobert
,
Chantal Griveau
et al.
Article dans une revue
hal-03792570v1
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Multi-taxa environmental DNA inventories reveal distinct taxonomic and functional diversity in urban tropical forest fragments
Julian Donald
,
Jérôme Murienne
,
Jérôme Chave
,
Amaia Iribar
,
Eliane Louisanna
et al.
Article dans une revue
hal-03282383v1
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Cascading effects of moth outbreaks on subarctic soil food webs
Irene Calderón-Sanou
,
Tamara Münkemüller
,
Lucie Zinger
,
Heidy Schimann
,
Nigel Gilles Yoccoz
et al.
Article dans une revue
hal-03346467v1
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Biodiversity monitoring using environmental DNA
Naiara Rodríguez-Ezpeleta
,
Lucie Zinger
,
Andrew Kinziger
,
Holly Bik
,
Aurélie Bonin
et al.
Article dans une revue
hal-04867368v1
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Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean
Marta Royo-Llonch
,
Pablo Sánchez
,
Clara Ruiz-González
,
Guillem Salazar
,
Carlos Pedrós-Alió
et al.
Article dans une revue
hal-03781908v1
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metabaR: An r package for the evaluation and improvement of DNA metabarcoding data quality
Lucie Zinger
,
Clément Lionnet
,
Anne-Sophie Benoiston
,
Julian Donald
,
Céline Mercier
et al.
Article dans une revue
hal-04717372v1
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Connecting high‐throughput biodiversity inventories: Opportunities for a site‐based genomic framework for global integration and synthesis
Paula Arribas
,
Carmelo Andújar
,
Martin Bidartondo
,
Kristine Bohmann
,
Éric Coissac
et al.
Article dans une revue
hal-03358499v1
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Disentangling the assembly mechanisms of ant cuticular bacterial communities of two Amazonian ant species sharing a common arboreal nest
Caroline Birer
,
Corrie Moreau
,
Niklas Tysklind
,
Lucie Zinger
,
Christophe Duplais
Article dans une revue
hal-02936020v1
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Sharing and reporting benefits from biodiversity research
Emily Marden
,
Richard Abbott
,
Frederic Austerlitz
,
Daniel Ortiz‐barrientos
,
Regina Baucom
et al.
Article dans une revue
hal-02993811v1
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From environmental DNA sequences to ecological conclusions: How strong is the influence of methodological choices?
Irene Calderón‐sanou
,
Tamara Münkemüller
,
Frédéric Boyer
,
Lucie Zinger
,
Wilfried Thuiller
Article dans une revue
hal-02324167v1
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One‐locus‐several‐primers: A strategy to improve the taxonomic and haplotypic coverage in diet metabarcoding studies
Emmanuel Corse
,
Christelle Tougard
,
Gaït Archambaud‐suard
,
Jean‐françois Agnèse
,
Françoise Messu Mandeng
et al.
Article dans une revue
hal-02109732v1
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Global Trends in Marine Plankton Diversity across Kingdoms of Life
Federico Ibarbalz
,
Nicolas Henry
,
Manoela Brandão
,
Severine Martini
,
Greta Busseni
et al.
Article dans une revue
hal-03094778v1
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Latent Dirichlet Allocation reveals spatial and taxonomic structure in a DNA‐based census of soil biodiversity from a tropical forest
Guilhem Sommeria‐klein
,
Lucie Zinger
,
Eric Coissac
,
Amaia Iribar
,
Heidy Schimann
et al.
Article dans une revue
hal-02402988v1
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Environmental and biotic drivers of soil microbial β‐diversity across spatial and phylogenetic scales
Loïc Chalmandrier
,
Johan Pansu
,
Lucie Zinger
,
Frédéric Boyer
,
Eric Coissac
et al.
Article dans une revue
hal-03032726v1
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DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions
Lucie Zinger
,
Aurélie Bonin
,
Inger Alsos
,
Miklós Bálint
,
Holly Bik
et al.
Article dans une revue
hal-02375694v1
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Altered trophic interactions in warming climates: consequences for predator diet breadth and fitness
Elvire Bestion
,
Andrea Soriano-Redondo
,
Julien Cucherousset
,
Staffan Jacob
,
Joël White
et al.
Article dans une revue
hal-02340138v1
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Multi‐trophic β‐diversity mediates the effect of environmental gradients on the turnover of multiple ecosystem functions
Camille Martinez‐almoyna
,
Wilfried Thuiller
,
Loïc Chalmandrier
,
Marc Ohlmann
,
Arnaud Foulquier
et al.
Article dans une revue
hal-02276279v1
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Body size determines soil community assembly in a tropical forest
Lucie Zinger
,
Pierre Taberlet
,
Heidy Schimann
,
Aurélie Bonin
,
Frédéric Boyer
et al.
Article dans une revue
hal-02079020v1
|
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Ubiquitous abundance distribution of non-dominant plankton across the global ocean
Enrico Ser-Giacomi
,
Lucie Zinger
,
Shruti Malviya
,
Colomban de Vargas
,
Eric Karsenti
et al.
Article dans une revue
hal-02364756v1
|
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Chemical regulation of body feather microbiota in a wild bird
Staffan Jacob
,
Louis Sallé
,
Lucie Zinger
,
Alexis Chaine
,
Christine Ducamp
et al.
Article dans une revue
hal-04967678v1
|
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Mapping the imprint of biotic interactions on β-diversity
Marc Ohlmann
,
Florent Mazel
,
Loïc Chalmandrier
,
Stéphane Bec
,
Eric Coissac
et al.
Article dans une revue
hal-03750500v1
|
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Comparative analysis of DNA extraction methods to study the body surface microbiota of insects: A case study with ant cuticular bacteria
Caroline Birer
,
Niklas Tysklind
,
Lucie Zinger
,
Christophe Duplais
Article dans une revue
hal-02105817v1
|
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Evaluation of short mitochondrial metabarcodes for the identification of Amazonian mammals
Arthur Kocher
,
Benoît de Thoisy
,
Francois Catzeflis
,
Maïlis Huguin
,
Sophie Valière
et al.
Article dans une revue
hal-01836328v1
|
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Climate warming reduces gut microbiota diversity in a vertebrate ectotherm
Elvire Bestion
,
Staffan Jacob
,
Lucie Zinger
,
Lucie Di Gesu
,
Murielle Richard
et al.
Article dans une revue
hal-01628046v1
|
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Not only mosses: lemming winter diets as described by DNA metabarcoding
Eeva Soininen
,
Lucie Zinger
,
Ludovic Gielly
,
Nigel Yoccoz
,
John-Andre Henden
et al.
Article dans une revue
hal-04892035v1
|
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Inferring neutral biodiversity parameters using environmental DNA data sets
Guilhem Sommeria-Klein
,
Lucie Zinger
,
Pierre Taberlet
,
Eric Coissac
,
Jérôme Chave
Article dans une revue
hal-04913158v1
|
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Variations in snow depth modify N-related soil microbial abundances and functioning during winter in subalpine grassland
My-Dung Jusselme
,
Patrick Saccone
,
Lucie Zinger
,
Mathieu Faure
,
Xavier Le Roux
et al.
Article dans une revue
istex
hal-01688390v1
|
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Using metabarcoding to reveal and quantify plant-pollinator interactions.
André Pornon
,
Nathalie Escaravage
,
Monique Burrus
,
Hélène Holota
,
Aurélie Khimoun
et al.
Article dans une revue
hal-01333538v1
|
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Extracellular DNA extraction is a fast, cheap and reliable alternative for multi-taxa surveys based on soil DNA
Lucie Zinger
,
Jérôme Chave
,
Eric Coissac
,
Amaia Iribar
,
Eliane Louisanna
et al.
Article dans une revue
istex
hal-01532638v1
|
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Coalescing molecular evolution and DNA barcoding
Lucie Zinger
,
Herve Philippe
Article dans une revue
hal-02962354v1
|
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Vector soup: high‐throughput identification of Neotropical phlebotomine sand flies using metabarcoding
Arthur Kocher
,
Jean‐charles Gantier
,
Pascal Gaborit
,
Lucie Zinger
,
Helene Holota
et al.
Article dans une revue
hal-04917754v1
|
|
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Contrasting microbial biogeographical patterns between anthropogenic subalpine grasslands and natural alpine grasslands
Roberto A. Geremia
,
Mihai Pușcaș
,
Lucie Zinger
,
Jean-Marc Bonneville
,
Philippe Choler
Article dans une revue
hal-01886752v1
|
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Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA
Johan Pansu
,
Charline Giguet-Covex
,
Gentile Francesco Ficetola
,
Ludovic Gielly
,
Frédéric Boyer
et al.
Article dans une revue
istex
hal-01878599v1
|
|
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Landscape-scale distribution patterns of earthworms inferred from soil DNA
J. Pansu
,
S. de Danieli
,
Jérémy Puissant
,
J.M. González
,
L. Gielly
et al.
Article dans une revue
istex
hal-02603003v1
|
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Effects of two grass species on the composition of soil fungal communities
B. Mouhamadou
,
J. Puissant
,
Emmanuelle Personeni
,
Marie Theveniau
,
E. M. Kastl
et al.
Article dans une revue
istex
hal-02646208v1
|
|
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Microbes on the Cliff: Alpine Cushion Plants Structure Bacterial and Fungal Communities
Julien Roy
,
Cécile H. Albert
,
Sébastien Ibanez
,
P. Saccone
,
L. Zinger
et al.
Article dans une revue
hal-01688202v1
|
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Changes in root-associated microbial communities are determined by species-specific plant growth responses to stress and disturbance
Abderrahim Bouasria
,
Tarfa Mustafa
,
Francesco de Bello
,
Lucie Zinger
,
Guy Lempérière
et al.
Article dans une revue
istex
hal-03114632v1
|
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Two decades of describing the unseen majority of aquatic microbial diversity
Lucie Zinger
,
Angélique Gobet
,
Thomas Pommier
Article dans une revue
istex
halsde-00724641v1
|
|
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Contrasting Diversity Patterns of Crenarchaeal, Bacterial and Fungal Soil Communities in an Alpine Landscape
Lucie Zinger
,
David P. H. Lejon
,
Florence Baptist
,
Abderrahim Bouasria
,
Serge Aubert
et al.
Article dans une revue
insu-00845128v1
|
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CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies
L. Zinger
,
J. Gury
,
O. Alibeu
,
D. Rioux
,
L. Gielly
et al.
Article dans une revue
istex
halsde-00281684v1
|
|
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Exonuclease activity of proofreading DNA polymerases is at the origin of artifacts in molecular profiling studies
J. Gury
,
L. Zinger
,
L. Gielly
,
P. Taberlet
,
R. A. Geremia
Article dans une revue
istex
halsde-00300429v1
|
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Tannin impacts on microbial diversity and the functioning of alpine soils: a multidisciplinary approach
F. Baptist
,
L. Zinger
,
J. C. Clement
,
C. Gallet
,
R. Guillemin
et al.
Article dans une revue
istex
halsde-00281689v1
|
|
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Corrigendum to “CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies” [Journal of Microbiological Methods 72 (2008) 42–53]
L. Zinger
,
J. Gury
,
O. Alibeu
,
D. Rioux
,
L. Gielly
et al.
Article dans une revue
istex
halsde-00300516v1
|
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Plant chemical defense induced by a seed-eating pollinator mutualist
C. Gallet
,
S. Ibanez
,
L. Zinger
,
F. R. Taravel
,
M. Trierweiler
et al.
Article dans une revue
istex
halsde-00293025v1
|
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Improvements of polymerase chain reaction and capillary electrophoresis single-strand conformation polymorphism methods in microbial ecology: Toward a high-throughput method for microbial diversity studies in soil
L. Zinger
,
J. Gury
,
F. Giraud
,
S. Krivobok
,
L. Gielly
et al.
Article dans une revue
istex
halsde-00276491v1
|