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Malik Kahli

12
Documents

Publications

Monitoring genome-wide replication fork directionality by Okazaki fragment sequencing in mammalian cells

Sarah Kit Leng Lui , Sarah Keegan , Peter Tonzi , Malik Kahli , Yu-Hung Chen
Nature Protocols, 2021, 16 (2), pp.1193-1218. ⟨10.1038/s41596-020-00454-5⟩
Article dans une revue hal-04438588v1

Processing of eukaryotic Okazaki fragments by redundant nucleases can be uncoupled from ongoing DNA replication in vivo

Malik Kahli , Joseph Osmundson , Rani Yeung , Duncan Smith
Nucleic Acids Research, 2019, 47 (4), pp.1814-1822. ⟨10.1093/nar/gky1242⟩
Article dans une revue hal-04438685v1
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Developmental and cancer-associated plasticity of DNA replication preferentially targets GC-poor, lowly expressed and late-replicating regions

Xia Wu , Hadi Kabalane , Malik Kahli , Nataliya Petryk , Bastien Laperrousaz
Nucleic Acids Research, 2018, 46 (19), pp.10157-10172. ⟨10.1093/nar/gky797⟩
Article dans une revue hal-02363281v2

Transcription shapes DNA replication initiation and termination in human cells

Yu-Hung Chen , Sarah Keegan , Malik Kahli , Peter Tonzi , David Fenyö
Nature Structural and Molecular Biology, 2018, 26 (1), pp.67-77. ⟨10.1038/s41594-018-0171-0⟩
Article dans une revue hal-04438679v1
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Replication landscape of the human genome

Nataliya Petryk , Malik Kahli , Yves d'Aubenton-Carafa , Yan Jaszczyszyn , Yimin Shen
Nature Communications, 2016, 7, ⟨10.1038/ncomms10208⟩
Article dans une revue hal-01412672v1
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Deciphering DNA replication dynamics in eukaryotic cell populations in relation with their averaged chromatin conformations OPEN

Arach Goldar , A. Arneodo , B. Audit , Françoise Argoul , A. Rappailles
Scientific Reports, 2016, 6 (22), pp.22469 (1-8). ⟨10.1038/srep22469⟩
Article dans une revue hal-01412574v1
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Mapping replication origin sequences in eukaryotic chromosomes.

Haiqing Fu , Emilie Besnard , Romain Desprat , Michael Ryan , Malik Kahli
Current Protocols in Cell Biology, 2014, 65 (1), pp.22.20.1-22.20.17. ⟨10.1002/0471143030.cb2220s65⟩
Article dans une revue hal-01840235v1
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Best practices for mapping replication origins in eukaryotic chromosomes

Emilie Besnard , Romain Desprat , Michael Ryan , Malik Kahli , Mirit Aladjem
Current Protocols in Cell Biology, 2014, 64 (1), pp.22.18.1-22.18.13. ⟨10.1002/0471143030.cb2218s64⟩
Article dans une revue hal-01840431v1

From the chromatin interaction network to the organization of the human genome into replication N/U-domains

Rasha E Boulos , Hanna Julienne , Antoine Baker , Chun-Long Chen , Nataliya Petryk
New Journal of Physics, 2014, 16 (11), pp.115014. ⟨10.1088/1367-2630/16/11/115014⟩
Article dans une revue cea-01120311v1

From Simple Bacterial and Archaeal Replicons to Replication N/U-Domains

Olivier Hyrien , Aurélien Rappailles , Guillaume Guilbaud , Antoine Baker , Chun-Long Chen
Journal of Molecular Biology, 2013, 425 (23), pp.4673-4689. ⟨10.1016/j.jmb.2013.09.021⟩
Article dans une revue hal-01557075v1
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Zac1 regulates an imprinted gene network critically involved in the control of embryonic growth.

Annie Varrault , Charlotte Gueydan , Annie Delalbre , Anja Bellmann , Souheir Houssami
Developmental Cell, 2006, 11 (5), pp.711-22. ⟨10.1016/j.devcel.2006.09.003⟩
Article dans une revue inserm-00158399v1