MC

Martin Crespi

172
Documents

Publications

Publications

Long noncoding RNAs in plant chromatin 3D conformation dynamics

Emilia Feuerstein , Pablo Manavella , Martin Crespi , Lucia Ferrero , Federico Ariel

Current Opinion in Plant Biology, 2025, 88, pp.102817. ⟨10.1016/j.pbi.2025.102817⟩

Article dans une revue hal-05525566v1

Subunit 3 of the SUPERKILLER complex mediates microRNA172-directed cleavage of Nodule Number Control 1 in Medicago truncatula

Soledad Traubenik , Mauricio Alberto Reynoso , Francisco Sánchez-Rodríguez , Milagros Yacullo , Aurelie Christ et al.

Plant Physiology, 2025, 199 (2), pp.kiaf425. ⟨10.1093/plphys/kiaf425⟩

Article dans une revue hal-05409917v1

Antisense-mediated regulation of nitric oxide biosynthesis

Wil Prall , Martin Crespi

Molecular Plant, 2025, 18 (5), pp.735-737. ⟨10.1016/j.molp.2025.03.010⟩

Article dans une revue hal-05208737v1
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Alternative Splicing Dynamics in Plant Adaptive Responses to Stress

Abdulrahman Alhabsi , Yu Ling , Martin Crespi , Anireddy S N Reddy , Magdy Mahfouz

Annual Review of Plant Biology, 2025, 76 (1), pp.687-717. ⟨10.1146/annurev-arplant-083123-090055⟩

Article dans une revue hal-05461431v1
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The transcription factor NF-YA10 determines the area explored by Arabidopsis thaliana roots through direct regulation of LAZY and TAC genes

Andana Barrios , Nicolas Gaggion , Natanael Mansilla , Leandro Lucero , Thomas Blein et al.

The Plant Journal, 2025, 121 (5), pp.e70016. ⟨10.1101/2023.04.26.538431⟩

Article dans une revue hal-04299899v1
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Arabidopsis SGS3 is recruited to chromatin by CHR11 to select RNA that initiate siRNA production

Taline Elmayan , Thomas Blein , Emilie Elvira-Matelot , Ivan Le Masson , Aurélie Christ et al.

Nature Communications, 2025, 16 (1), pp.2978. ⟨10.1038/s41467-025-57394-5⟩

Article dans une revue hal-05012332v1

Epigenetic control during root development and symbiosis

María Eugenia Zanetti , Flavio Blanco , Milagros Ferrari , Federico Ariel , Matthias Benoit et al.

Plant Physiology, 2024, 196, pp.697-710. ⟨10.1093/plphys/kiae333⟩

Article dans une revue hal-04646016v1
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When splicing meets transgene DNA methylation to uncover elite alleles for plant yield

J. Bazin , M. Crespi

New Phytologist, 2024, 243 (5), pp.1631-1632. ⟨10.1111/nph.19858⟩

Article dans une revue hal-05066700v1
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An atlas of the tomato epigenome reveals that KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac distribution

Jing An , Rim Brik Chaouche , Leonardo Pereyra-Bistraín , Hugo Zalzalé , Qingyi Wang et al.

Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (28), pp.e2400737121. ⟨10.1073/pnas.2400737121⟩

Article dans une revue hal-04731984v1
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Genetic–epigenetic interplay in the determination of plant 3D genome organization

Xiaoning He , Chloé Dias Lopes , Leonardo I Pereyra-Bistrain , Ying Huang , Jing An et al.

Nucleic Acids Research, 2024, 52 (17), pp.10220-10234. ⟨10.1093/nar/gkae690⟩

Article dans une revue hal-04672636v1

Non-B DNA in plant genomes: prediction, mapping, and emerging roles

Lucía Ferrero , Wenli Zhang , Moussa Benhamed , Martin Crespi , Federico Ariel

Trends in Plant Science, 2024, 29 (11), pp.1224-1244. ⟨10.1016/j.tplants.2024.06.011⟩

Article dans une revue hal-05137689v1

A lateral organ boundaries domain transcription factor acts downstream of the auxin response factor 2 to control nodulation and root architecture in Medicago truncatula

Cristina Kirolinko , Karen Hobecker , Marianela Cueva , Florencia Botto , Aurélie Christ et al.

New Phytologist, 2024, ⟨10.1111/nph.19766⟩

Article dans une revue hal-04567150v1
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Dynamics of ribosome composition and ribosomal protein phosphorylation in immune signaling in Arabidopsis thaliana

Anna Siodmak , Federico Martinez-Seidel , Naganand Rayapuram , Jeremie Bazin , Hanna Alhoraibi et al.

Nucleic Acids Research, 2023, 51 (21), pp.11876-11892. ⟨10.1093/nar/gkad827⟩

Article dans une revue hal-04495163v1
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The long intergenic noncoding RNA ARES modulates root architecture in Arabidopsis

Thomas Roulé , María Florencia Legascue , Andana Barrios , Nicolás Gaggion , Martin Crespi et al.

IUBMB Life, 2023, 75 (10), pp.880-892. ⟨10.1002/iub.2761⟩

Article dans une revue hal-04299803v1
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HSFA1a modulates plant heat stress responses and alters the 3D chromatin organization of enhancer-promoter interactions

Ying Huang , Jing An , Sanchari Sircar , Clara Bergis , Chloé Dias Lopes et al.

Nature Communications, 2023, 14, ⟨10.1038/s41467-023-36227-3⟩

Article dans une revue hal-04062805v1
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Transcription factors KANADI 1, MYB DOMAIN PROTEIN 44, and PHYTOCHROME INTERACTING FACTOR 4 regulate long intergenic noncoding RNAs expressed in Arabidopsis roots

Li Liu , Michel Heidecker , Thomas Depuydt , Nicolas Manosalva Perez , Martin Crespi et al.

Plant Physiology, 2023, 193 (3), pp.1933-1953. ⟨10.1093/plphys/kiad360⟩

Article dans une revue hal-04299815v1
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Synergistic action of the Arabidopsis spliceosome components PRP39a and SmD1b in promoting posttranscriptional transgene silencing

Jérémie Bazin , Emilie Elvira-Matelot , Thomas Blein , Vincent Jauvion , Nathalie Bouteiller et al.

The Plant cell, 2023, 35 (6), pp.1917-1935. ⟨10.1093/plcell/koad091⟩

Article dans une revue hal-04298436v1

Pathogen-induced m6A dynamics affect plant immunity

Wil Prall , Arsheed Sheikh , Jeremie Bazin , Jean Bigeard , Marilia Almeida-Trapp et al.

The Plant cell, 2023, 35 (11), pp.4155-4172. ⟨10.1093/plcell/koad224⟩

Article dans une revue hal-04495080v1

Spotlight: Antisense regulation of miRNA action during phosphate starvation

Soledad Traubenik , Martin Crespi

Molecular Plant, 2023, 16 (8), pp.1249-1251. ⟨10.1016/j.molp.2023.07.013⟩

Article dans une revue hal-04600689v1
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Long non-coding RNAs reveal new regulatory mechanisms controlling gene expression

Martin Crespi

Comptes Rendus. Biologies, 2023, 345 (4), pp.15-39. ⟨10.5802/crbiol.106⟩

Article dans une revue hal-04313170v1
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The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA

Thomas Roulé , Aurelie Christ , Nosheen Hussain , Ying Huang , Caroline Hartmann et al.

Molecular Plant, 2022, 15 (5), pp.1-58. ⟨10.1016/j.molp.2022.02.007⟩

Article dans une revue hal-03698779v1
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The Arabidopsis APOLO and human UPAT sequence-unrelated long noncoding RNAs can modulate DNA and histone methylation machineries in plants

Camille Fonouni-Farde , Aurélie Christ , Thomas Blein , María Florencia Legascue , Lucía Ferrero et al.

Genome Biology, 2022, 23 (1), pp.181. ⟨10.1186/s13059-022-02750-7⟩

Article dans une revue hal-03768549v1
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The Rice Serine/Arginine Splicing Factor RS33 Regulates Pre-mRNA Splicing during Abiotic Stress Responses

Haroon Butt , Jeremie Bazin , Kasavajhala Prasad , Nourelislam Awad , Martin Crespi et al.

Cells, 2022, 11 (11), pp.1796. ⟨10.3390/cells11111796⟩

Article dans une revue hal-04313167v1
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A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

Runxuan Zhang , Richard Kuo , Max Coulter , Cristiane Calixto , Juan Carlos Entizne et al.

Genome Biology, 2022, 23 (1), pp.149. ⟨10.1186/s13059-022-02711-0⟩

Article dans une revue hal-04313162v1

Non-B DNA structures emerging from plant genomes

Martin Crespi , Federico Ariel

Trends in Plant Science, 2022, 27 (7), pp.624-626. ⟨10.1016/j.tplants.2022.03.004⟩

Article dans une revue hal-04313171v1

A conserved HSF :miR169: NF‐YA loop involved in tomato and Arabidopsis heat stress tolerance

Sombir Rao , Apoorva Gupta , Chandni Bansal , Celine Sorin , Martin Crespi et al.

The Plant Journal, 2022, 112 (1), pp.7-26. ⟨10.1111/tpj.15963⟩

Article dans une revue hal-04305855v1
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Silencing the conserved small nuclear ribonucleoprotein SmD1 target gene alters susceptibility to root-knot nematodes in plants

Joffrey Mejias , Yongpan Chen , Jérémie Bazin , Nhat-My Truong , Karine Mulet et al.

Plant Physiology, 2022, 189 (3), pp.1741-1756. ⟨10.1093/plphys/kiac155⟩

Article dans une revue hal-03879983v1
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Regulatory long non-coding RNAs in root growth and development

Thomas Roulé , Martin Crespi , Thomas Blein

Biochemical Society Transactions, 2021, pp.1-18. ⟨10.1042/BST20210743⟩

Article dans une revue hal-03555826v1
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Plant Long Noncoding RNAs: New Players in the Field of Post-Transcriptional Regulations

Camille Fonouni-Farde , Federico Ariel , Martin Crespi

Non-Coding RNA, 2021, 7 (1), pp.1-15. ⟨10.3390/ncrna7010012⟩

Article dans une revue (article de synthèse) hal-03334157v1

The lncRNA APOLO interacts with the transcription factor WRKY42 to trigger root hair cell expansion in response to cold

Michaël Moison , Javier Martínez Pacheco , Leandro Lucero , Camille Fonouni-Farde , Johan Rodríguez-Melo et al.

Molecular Plant, 2021, 14 (6), pp.937-948. ⟨10.1016/j.molp.2021.03.008⟩

Article dans une revue hal-03331698v1
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Polycomb-dependent differential chromatin compartmentalization determines gene co-regulation in Arabidopsis

Ying Huang , Sanchari Sicar , Juan S Ramirez-Prado , Deborah Manza-Mianza , Javier Antunez-Sanchez et al.

Genome Research, 2021, 31 (7), pp.1-63. ⟨10.1101/gr.273771.120⟩

Article dans une revue hal-03469045v1
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ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

Nicolás Gaggion , Federico Ariel , Vladimir Daric , Eric Lambert , Simon Legendre et al.

GigaScience, 2021, 10 (7), pp.giab052. ⟨10.1093/gigascience/giab052⟩

Article dans une revue hal-03324566v1
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Insights into long non-coding RNA regulation of anthocyanin carrot root pigmentation

Constanza Chialva , Thomas Blein , Martin Crespi , Diego Lijavetzky

Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-83514-4⟩

Article dans une revue hal-03324569v1
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The root‐knot nematode effector MiEFF18 interacts with the plant core spliceosomal protein SmD1 required for giant cell formation

Joffrey Mejias , Jérémie Bazin , Nhat‐my Truong , Yongpan Chen , Nathalie Marteu et al.

New Phytologist, 2021, 229 (6), pp.3408-3423. ⟨10.1111/nph.17089⟩

Article dans une revue hal-03148749v1
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Overlapping roles of spliceosomal components SF3B1 and PHF5A in rice splicing regulation

Haroon Butt , Jeremie Bazin , Sahar Alshareef , Ayman Eid , Moussa Benhamed et al.

Communications Biology, 2021, 4 (1), ⟨10.1038/s42003-021-02051-y⟩

Article dans une revue hal-03331718v1

High-quality genome sequence of white lupin provides insight into soil exploration and seed quality

Bárbara Hufnagel , André Marques , Alexandre Soriano , Laurence Marquès , Fanchon Divol et al.

Nature Communications, 2020, 11 (1), pp.492. ⟨10.1038/s41467-019-14197-9⟩

Article dans une revue hal-04721448v1
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Wheat chromatin architecture is organized in genome territories and transcription factories

Lorenzo Concia , Alaguraj Veluchamy , Juan Ramirez-Prado , Azahara Martin-Ramirez , Ying Huang et al.

Genome Biology, 2020, 21 (1), pp.1-20. ⟨10.1186/s13059-020-01998-1⟩

Article dans une revue hal-02571325v1
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Landscape of the Noncoding Transcriptome Response of Two Arabidopsis Ecotypes to Phosphate Starvation

Thomas Blein , Coline Balzergue , Thomas Roulé , Marc Gabriel , Laetitia Scalisi et al.

Plant Physiology, 2020, 183 (3), pp.1058-1072. ⟨10.1104/pp.20.00446⟩

Article dans une revue cea-02962421v1

Evolution of the Small Family of Alternative Splicing Modulators Nuclear Speckle RNA-Binding Proteins in Plants

Leandro Lucero , Jeremie Bazin , Johan Rodriguez Melo , Fernando Ibañez , Martín Crespi et al.

Genes, 2020, 11 (2), pp.207. ⟨10.3390/genes11020207⟩

Article dans une revue hal-02958706v1
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GCN5 modulates salicylic acid homeostasis by regulating H3K14ac levels at the 5′ and 3′ ends of its target genes

Soonkap Kim , Sophie Piquerez , Juan Ramirez-Prado , Emmanouil Mastorakis , Alaguraj Veluchamy et al.

Nucleic Acids Research, 2020, 48 (11), pp.5953-5966. ⟨10.1093/nar/gkaa369⟩

Article dans une revue hal-02889481v1

The Arabidopsis lnc RNA ASCO modulates the transcriptome through interaction with splicing factors

Richard Rigo , Jérémie Bazin , Natali Romero‐barrios , Michaël Moison , Leandro Lucero et al.

EMBO Reports, 2020, 21 (5), pp.1-19. ⟨10.15252/embr.201948977⟩

Article dans une revue hal-02991642v1

R-Loop Mediated trans Action of the APOLO Long Noncoding RNA

Federico Ariel , Leandro Lucero , Aurelie Christ , Maria Florencia Mammarella , Teddy Jegu et al.

Molecular Cell, 2020, 77 (5), pp.1055-1065. ⟨10.1016/j.molcel.2019.12.015⟩

Article dans une revue hal-02964078v1
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High-quality genome sequence of white lupin provides insight into soil exploration and seed quality

Barbara Hufnagel , André Marques , Alexandre Soriano , Laurence Marquès , Fanchon Divol et al.

Nature Communications, 2020, 11 (1), pp.492. ⟨10.1038/s41467-019-14197-9⟩

Article dans une revue hal-02460008v1

To keep or not to keep: mRNA stability and translatability in root nodule symbiosis

María Eugenia Zanetti , Flavio Blanco , Mauricio Reynoso , Martín Crespi

Current Opinion in Plant Biology, 2020, 56, pp.109-117. ⟨10.1016/j.pbi.2020.04.012⟩

Article dans une revue hal-03216724v1

Long noncoding RNAs shape transcription in plants

Leandro Lucero , Camille Fonouni-Farde , Martin Crespi , Federico Ariel

Transcription, 2020, 11 (3-4), pp.160-171. ⟨10.1080/21541264.2020.1764312⟩

Article dans une revue (article de synthèse) hal-03217920v1
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Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis

Jérémie Bazin , Kiruthiga G Mariappan , Yunhe Jiang , Thomas Blein , Ronny Voelz et al.

PLoS Pathogens, 2020, 16 (4), pp.e1008401. ⟨10.1371/journal.ppat.1008401⟩

Article dans une revue hal-03015159v1

Plant transcription links environmental cues and phenotypic plasticity

M. Crespi

Transcription, 2020, 11 (3-4), pp.97-99. ⟨10.1080/21541264.2020.1837498⟩

Article dans une revue hal-03215156v1
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Heterocyst formation under the control of a cell-specific antisense RNA

Diana Kirilovsky , Martin Crespi

Plant and Cell Physiology, 2019, 60 (8), pp.1631-1632. ⟨10.1093/pcp/pcz140⟩

Article dans une revue hal-02617907v1

RNA-Mediated Plant Behavior

Misato Ohtani , Yukio Kurihara , Motoaki Seki , Martin Crespi

Plant and Cell Physiology, 2019, 60 (9), pp.1893 - 1896. ⟨10.1093/pcp/pcz168⟩

Article dans une revue hal-02619316v1
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Assessing the Response of Small RNA Populations to Allopolyploidy Using Resynthesized Brassica napus Allotetraploids

Paulina Martinez Palacios , Marie-Pierre Jacquemot , Marion Tapie , Agnes Rousselet , Mamoudou Diop et al.

Molecular Biology and Evolution, 2019, 36 (4), pp.709-726. ⟨10.1093/molbev/msz007⟩

Article dans une revue hal-02383691v1

Alternative Splicing in the Regulation of Plant–Microbe Interactions

Richard Rigo , Jérémie Bazin , Martin Crespi , Céline Charon

Plant and Cell Physiology, 2019, 60 (9), pp.1906-1916. ⟨10.1093/pcp/pcz086⟩

Article dans une revue hal-02383689v1
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CRISPR directed evolution of the spliceosome for resistance to splicing inhibitors

Haroon Butt , Ayman Eid , Afaque Momin , Jérémie Bazin , Martin Crespi et al.

Genome Biology, 2019, 20, pp.73. ⟨10.1186/s13059-019-1680-9⟩

Article dans une revue hal-02383690v1
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Nuclear Speckle RNA Binding Proteins Remodel Alternative Splicing and the Non-coding Arabidopsis Transcriptome to Regulate a Cross-Talk Between Auxin and Immune Responses

Jérémie Bazin , Natali Romero , Richard Rigo , Céline Charon , Thomas Blein et al.

Frontiers in Plant Science, 2018, 9, pp.1209. ⟨10.3389/fpls.2018.01209⟩

Article dans une revue hal-02379622v1

Thermopriming triggers splicing memory in Arabidopsis

Yu Ling , Natalia Serrano , Ge Gao , Mohamed Atia , Morad Mokhtar et al.

Journal of Experimental Botany, 2018, 69 (10), pp.2659-2675. ⟨10.1093/jxb/ery062⟩

Article dans une revue hal-02383699v1
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Arabidopsis HEAT SHOCK TRANSCRIPTION FACTORA1b regulates multiple developmental genes under benign and stress conditions

Waleed Albihlal , Irabonosi Obomighie , Thomas Blein , Ramona Persad , Igor Chernukhin et al.

Journal of Experimental Botany, 2018, 69 (11), pp.2847-2862. ⟨10.1093/jxb/ery142⟩

Article dans une revue hal-02379644v1

Whole-genome landscape of Medicago truncatula symbiotic genes

Yann Pecrix , S. Evan Staton , Erika Sallet , Christine Lelandais-Brière , Sandra Moreau et al.

Nature Plants, 2018, 4 (12), pp.1017-1025. ⟨10.1038/s41477-018-0286-7⟩

Article dans une revue hal-04779324v1
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Splicing regulation by long noncoding RNAs

Natali Romero Barrios , Maria Florencia Legascue , Moussa Benhamed , Federico Ariel , Martin Crespi

Nucleic Acids Research, 2018, 46 (5), pp.2169-2184. ⟨10.1093/nar/gky095⟩

Article dans une revue hal-02625980v1

Alternative splicing: the lord of the rings

Federico Ariel , Martin Crespi

Nature Plants, 2017, 3, pp.17065. ⟨10.1038/nplants.2017.65⟩

Article dans une revue hal-02624324v1

The microRNA390/TAS3 pathway mediates symbiotic nodulation and lateral root growth

Karen Vanesa Hobecker , Mauricio Alberto Reynoso , Pilar Bustos-Sanmamed , Jiangqi Wen , Kirankumar S. Mysore et al.

Plant Physiology, 2017, 174 (4), pp.2469-2486. ⟨10.1104/pp.17.00464⟩

Article dans une revue hal-02629133v1

TMV induces RNA decay pathways to modulate gene silencing and disease symptoms

Gabriela Conti , Diego Zavallo , Andrea L. Venturuzzi , Maria C. Rodriguez , Martin Crespi et al.

The Plant Journal, 2017, 89 (1), pp.73 - 84. ⟨10.1111/tpj.13323⟩

Article dans une revue hal-01604785v1
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The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution

Hélène Badouin , Jerome Gouzy , Christopher Grassa , Florent Murat , S Evan Staton et al.

Nature, 2017, 546 (7656), pp.148-152. ⟨10.1038/nature22380⟩

Article dans une revue hal-01603287v1
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The <em>Arabidopsis</em> SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility

Teddy Jegu , Alaguraj Veluchamy , Juan Sebastien Ramirez Prado , Charley Rizzi Paillet , Magali Perez et al.

Genome Biology, 2017, 18, pp.114. ⟨10.1186/s13059-017-1246-7⟩

Article dans une revue hal-02627578v1
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Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation

Jérémie Bazin , Katja Baerenfaller , Sager J. Gosai , Brian D. Gregory , Martin Crespi et al.

Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (46), pp.E10018-E10027. ⟨10.1073/pnas.1708433114⟩

Article dans une revue hal-02622544v1

Antisense movement on the clock

Jérémie Bazin , Martin Crespi

New Phytologist, 2017, 216 (3), pp.626-628. ⟨10.1111/nph.14769⟩

Article dans une revue hal-02617740v1
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LHP1 regulates H3K27me3 spreading and shapes the three-dimensional conformation of the arabidopsis genome

Alaguraj Veluchamy , Teddy Jegu , Federico Damian Ariel , David Latrasse , Kiruthiga Gayathri Mariappan et al.

PLoS ONE, 2016, 11 (7), pp.1-25. ⟨10.1371/journal.pone.0158936⟩

Article dans une revue hal-01602849v1

One gene, many proteins: mapping cell-specific alternative splicing in lants

Ranjan Swarup , Martin Crespi , Malcolm Bennett

Developmental Cell, 2016, 39 (4), pp.383-385. ⟨10.1016/j.devcel.2016.11.002⟩

Article dans une revue hal-01602941v1

Arabidopsis CLAVATA1 and CLAVATA2 receptors contribute to <em>Ralstonia solanacearum</em> pathogenicity through a miR169-dependent pathway

Mathieu Hanemian , Xavier X. Barlet , Céline Sorin , Koste A. Yadeta , Harald Keller et al.

New Phytologist, 2016, 211 (2), pp.502-515. ⟨10.1111/nph.13913⟩

Article dans une revue hal-02636021v1

Noncoding RNAs, emerging regulators in root endosymbioses

Christine Lelandais Briere , Jeremy Moreau , Caroline Hartmann , Martin Crespi

Molecular Plant-Microbe Interactions, 2016, 29 (3), pp.170-180. ⟨10.1094/MPMI-10-15-0240-FI⟩

Article dans une revue hal-02631079v1

The nuclear ribonucleoprotein smd1 interplays with splicing, rna quality control, and posttranscriptional gene silencing in arabidopsis

Emilie Elvira-Matelot , Florian Bardou , Federico Ariel , Vincent V. Jauvion , Nathalie N. Bouteiller et al.

The Plant cell, 2016, 28 (2), pp.426-438. ⟨10.1105/tpc.15.01045⟩

Article dans une revue hal-02637465v1

Detection of generic differential RNA processing events from RNA-seq data

van Du T Tran , Oussema Souiai , Natali Romero-Barrios , Martin Crespi , Daniel Gautheret

RNA Biology, 2016, 13 (1), pp.59 - 67. ⟨10.1080/15476286.2015.1118604⟩

Article dans une revue hal-01412593v1

Put your 3D glasses on: plant chromatin is on show

Natalia Y. Rodriguez-Granados , Juan S. Ramirez-Prado , Alaguraj Veluchamy , David Latrasse , Cécile Raynaud et al.

Journal of Experimental Botany, 2016, 67 (11), pp.3205-3221. ⟨10.1093/jxb/erw168⟩

Article dans une revue hal-02636519v1

Battles and hijacks: noncoding transcription in plants

Federico Ariel , Natali Romero Barrios , Teddy Jegu , Moussa Benhamed , Martin Crespi

Trends in Plant Science, 2015, 20 (6), pp.362-371. ⟨10.1016/j.tplants.2015.03.003⟩

Article dans une revue (article de synthèse) istex hal-02635660v1

Abiotic Stress Responses in Legumes: Strategies Used to Cope with Environmental Challenges

Susana S. Araujo , Steve Beebe , Martín Crespi , Bruno B. Delbreil , Esther M. Gonzalez et al.

Critical Reviews in Plant Sciences, 2015, 34 (1-3), pp.237 - 280. ⟨10.1080/07352689.2014.898450⟩

Article dans une revue (article de synthèse) hal-02635256v1
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In plants, decapping prevents RDR6-dependent production of small interfering RNAs from endogenous mRNAs

Angel Martinez de Alba , Anna Beatriz Moreno , Marc Gabriel , Allison Mallory , Aurélie Christ et al.

Nucleic Acids Research, 2015, 43 (5), pp.2902-2913. ⟨10.1093/nar/gkv119⟩

Article dans une revue hal-01204176v1

The chloroplastic DEVH-box RNA helicase Increased Size Exclusion Limit 2 involved in plasmodesmata regulation is required for group II intron splicing

Nicolas Carlotto , Sonia Wirth , Nicolas Furman , Nazarena Ferreyra Solari , Federico Ariel et al.

Plant, Cell and Environment, 2015, 39 (1), pp.165-173. ⟨10.1111/pce.12603⟩

Article dans une revue hal-02630906v1
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A SWI/SNF Chromatin Remodelling Protein Controls Cytokinin Production through the Regulation of Chromatin Architecture

Teddy Jegu , Séverine Domenichini , Thomas Blein , Federico Ariel , Aurélie Christ et al.

PLoS ONE, 2015, 10 (10), pp.e0138276. ⟨10.1371/journal.pone.0138276⟩

Article dans une revue hal-02379647v1

A phylogenetically conserved group of NF-Y transcription factors interact to control nodulation in legumes

Maël Baudin , Tom Laloum , Agnes Lepage , Carolina Ripodas , Federico Ariel et al.

Plant Physiology, 2015, 169 (4), pp.2761-2773. ⟨10.1104/pp.15.01144⟩

Article dans une revue hal-03082934v1

A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis

Céline Sorin , Marie Declerck , Aurélie Christ , Thomas Blein , Linnan Ma et al.

New Phytologist, 2014, 202 (4), pp.1197-1211. ⟨10.1111/nph.12735⟩

Article dans une revue hal-02379657v1
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The small RNA diversity from Medicago truncatula roots under biotic interactions evidences the environmental plasticity of the miRNAome.

Damien Formey , Erika Sallet , Christine Lelandais-Brière , Cécile Ben , Pilar Bustos-Sanmamed et al.

Genome Biology, 2014, 15 (9), pp.457. ⟨10.1186/s13059-014-0457-4⟩

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The BAF60 Subunit of the SWI/SNF Chromatin-Remodeling Complex Directly Controls the Formation of a Gene Loop at FLOWERING LOCUS C in Arabidopsis

Teddy Jégu , David Latrasse , Marianne Delarue , Heribert Hirt , Séverine Domenichini et al.

The Plant cell, 2014, 26 (2), pp.538-551. ⟨10.1105/tpc.113.114454⟩

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Long Noncoding RNA Modulates Alternative Splicing Regulators in Arabidopsis

Florian Bardou , Federico Ariel , Craig G. Simpson , Natali Romero-Barrios , Philippe Laporte et al.

Developmental Cell, 2014, 30 (2), pp.166 - 176. ⟨10.1016/j.devcel.2014.06.017⟩

Article dans une revue hal-02639339v1
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Dual function of MIPS1 as a metabolic enzyme and transcriptional regulator.

David Latrasse , Teddy Jégu , Pin-Hong Meng , Christelle Mazubert , Elodie Hudik et al.

Nucleic Acids Research, 2013, 41 (5), pp.2907-17. ⟨10.1093/nar/gks1458⟩

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Small RNA pathways and diversity in model legumes: lessons from genomics.

Pilar Bustos-Sanmamed , Jérémie Bazin , Caroline Hartmann , Martin Crespi , Christine Lelandais-Brière

Frontiers in Plant Science, 2013, 4, pp.236. ⟨10.3389/fpls.2013.00236⟩

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Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants

Ana Beatriz A. B. Moreno , Angel A. Martinez de Alba , Florian F. Bardou , Martin D. M. D. Crespi , Herve H. Vaucheret et al.

Nucleic Acids Research, 2013, 41 (8), pp.4699 - 4708. ⟨10.1093/nar/gkt152⟩

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Analyzing small and long RNAs in plant development using non-radioactive in situ hybridization.

Pilar Bustos-Sanmamed , Carole Laffont , Florian Frugier , Christine Lelandais-Brière , Martin Crespi

Methods in Molecular Biology, 2013, 959, pp.303-16. ⟨10.1007/978-1-62703-221-6_20⟩

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Independent activity of the homologous small regulatory RNAs AbcR1 and AbcR2 in the legume symbiont Sinorhizobium meliloti.

Omar Torres-Quesada , Vicenta Millán , Rafael Nisa-Martínez , Florian Bardou , Martín Crespi et al.

PLoS ONE, 2013, 8 (7), pp.e68147. ⟨10.1371/journal.pone.0068147⟩

Article dans une revue hal-01071577v1

Analyzing protein distribution in plant tissues using "whole-mount" immunolocalization.

Pilar Bustos-Sanmamed , Carole Laffont , Florian Frugier , Christine Lelandais-Brière , Martin Crespi

Methods in Molecular Biology, 2013, 959, pp.317-22. ⟨10.1007/978-1-62703-221-6_21⟩

Article dans une revue hal-00856158v1

Dual involvement of a Medicago truncatula NAC transcription factor in root abiotic stress response and symbiotic nodule senescence.

Axel de Zélicourt , Anouck Diet , Jessica Marion , Carole Laffont , Federico Ariel et al.

The Plant Journal, 2012, 70 (2), pp.220-30. ⟨10.1111/j.1365-313X.2011.04859.x⟩

Article dans une revue hal-00855577v1

Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis.

Virginie Jouannet , Ana Beatriz Moreno , Taline Elmayan , Hervé Vaucheret , Martin D Crespi et al.

EMBO Journal, 2012, 31 (7), pp.1704-13. ⟨10.1038/emboj.2012.20⟩

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Comparative transcriptomic analysis of salt adaptation in roots of contrasting Medicago truncatula genotypes.

Ons Zahaf , Sandrine Blanchet , Axel de Zélicourt , Benoît Alunni , Julie Plet et al.

Molecular Plant, 2012, 5 (5), pp.1068-81. ⟨10.1093/mp/sss009⟩

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Two direct targets of cytokinin signaling regulate symbiotic nodulation in Medicago truncatula.

Federico Ariel , Marianne Brault-Hernandez , Carole Laffont , Emeline Huault , Mathias Brault et al.

The Plant cell, 2012, 24 (9), pp.3838-52. ⟨10.1105/tpc.112.103267⟩

Article dans une revue hal-00856169v1

[Non-coding RNAs involved in plant responses to environmental constraints].

Christine Lelandais-Brière , Céline Sorin , Martin Crespi , Caroline Hartmann

Biologie Aujourd'hui, 2012, 206 (4), pp.313-22. ⟨10.1051/jbio/2012032⟩

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MicroRNAs as regulators of root development and architecture.

Ghazanfar A Khan , Marie Declerck , Céline Sorin , Caroline Hartmann , Martin Crespi et al.

Plant Molecular Biology, 2011, 77 (1-2), pp.47-58. ⟨10.1007/s11103-011-9793-x⟩

Article dans une revue istex hal-00856205v1

Transcriptional and post-transcriptional regulation of a NAC1 transcription factor in Medicago truncatula roots.

Katrien d'Haeseleer , Griet den Herder , Carole Laffont , Julie Plet , Virginie Mortier et al.

New Phytologist, 2011, 191 (3), pp.647-61. ⟨10.1111/j.1469-8137.2011.03719.x⟩

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MtCRE1-dependent cytokinin signaling integrates bacterial and plant cues to coordinate symbiotic nodule organogenesis in Medicago truncatula.

Julie Plet , Anton Wasson , Federico Ariel , Christine Le Signor , David Baker et al.

The Plant Journal, 2011, 65 (4), pp.622-33. ⟨10.1111/j.1365-313X.2010.04447.x⟩

Article dans une revue hal-00856206v1

Dual RNAs in plants.

Florian Bardou , Francisco Merchan , Federico Ariel , Martin Crespi

Biochimie, 2011, 93 (11), pp.1950-4. ⟨10.1016/j.biochi.2011.07.028⟩

Article dans une revue istex hal-00856201v1
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A novel fry1 allele reveals the existence of a mutant phenotype unrelated to 5'->3' exoribonuclease (XRN) activities in Arabidopsis thaliana roots

Judith Hirsch , Julie Misson , Peter A Crisp , Pascale David , Vincent Bayle et al.

PLoS ONE, 2011, 6 (2), pp.e16724. ⟨10.1371/journal.pone.0016724⟩

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Cleavage of a non-conserved target by a specific miR156 isoform in root apexes of Medicago truncatula.

Loreto Naya , Ghazantar Abbas Khan , Céline Sorin , Caroline Hartmann , Martin Crespi et al.

Plant Signaling and Behavior, 2010, 5 (3), pp.328-31

Article dans une revue hal-00856232v1

Small RNA diversity in plants and its impact in development.

Christine Lelandais-Brière , Céline Sorin , Marie Declerck , Abdelali Benslimane , Martin Crespi et al.

Curr Genomics, 2010, 11 (1), pp.14-23. ⟨10.2174/138920210790217918⟩

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The compact root architecture1 gene regulates lignification, flavonoid production, and polar auxin transport in Medicago truncatula.

Carole Laffont , Sandrine Blanchet , Catherine Lapierre , Lysiane Brocard , Pascal Ratet et al.

Plant Physiology, 2010, 153 (4), pp.1597-607. ⟨10.1104/pp.110.156620⟩

Article dans une revue hal-00856223v1
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miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth.

Elena Marin , Virginie Jouannet , Aurélie Herz , Annemarie S Lokerse , Dolf Weijers et al.

The Plant cell, 2010, 22 (4), pp.1104-17. ⟨10.1105/tpc.109.072553⟩

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A novel RNA-binding peptide regulates the establishment of the Medicago truncatula-Sinorhizobium meliloti nitrogen-fixing symbiosis.

Philippe Laporte , Béatrice Satiat-Jeunemaître , Isabel Velasco , Tibor Csorba , Willem van de Velde et al.

The Plant Journal, 2010, 62 (1), pp.24-38. ⟨10.1111/j.1365-313X.2009.04121.x⟩

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The LOB-like transcription factor Mt LBD1 controls Medicago truncatula root architecture under salt stress.

Federico D Ariel , Anouck Diet , Martin Crespi , Raquel L Chan

Plant Signaling and Behavior, 2010, 5 (12), pp.1666-8

Article dans une revue hal-00856214v1

Non-protein-coding RNAs and their interacting RNA-binding proteins in the plant cell nucleus.

Celine Charon , Ana Beatriz Moreno , Florian Bardou , Martin Crespi

Molecular Plant, 2010, 3 (4), pp.729-39. ⟨10.1093/mp/ssq037⟩

Article dans une revue hal-00856221v1

Environmental regulation of lateral root emergence in Medicago truncatula requires the HD-Zip I transcription factor HB1.

Federico Ariel , Anouck Diet , Marion Verdenaud , Véronique Gruber , Florian Frugier et al.

The Plant cell, 2010, 22 (7), pp.2171-83. ⟨10.1105/tpc.110.074823⟩

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Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses.

Besma Ben Amor , Sonia Wirth , Francisco Merchan , Philippe Laporte , Yves d'Aubenton-Carafa et al.

Genome Research, 2009, 19 (1), pp.57-69. ⟨10.1101/gr.080275.108⟩

Article dans une revue hal-00736193v1
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Endogenous TasiRNAs mediate non-cell autonomous effects on gene regulation in Arabidopsis thaliana.

Rebecca Schwab , Alexis Maizel , Virginia Ruiz-Ferrer , Damien Garcia , Martin Bayer et al.

PLoS ONE, 2009, 4 (6), pp.e5980. ⟨10.1371/journal.pone.0005980⟩

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Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules.

Christine Lelandais-Brière , Loreto Naya , Erika Sallet , Fanny Calenge , Florian Frugier et al.

The Plant cell, 2009, 21 (9), pp.2780-96. ⟨10.1105/tpc.109.068130⟩

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Plant root growth, architecture and function

Angela Hodge , Graziella Berta , Claude Doussan , Francisco Merchan , Martin Crespi

Plant and Soil, 2009, 321 (1-2), pp.153-187. ⟨10.1007/s11104-009-9929-9⟩

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Identification of transcription factors involved in root apex responses to salt stress in Medicago truncatula.

Véronique Gruber , Sandrine Blanchet , Anouck Diet , Ons Zahaf , Adnane Boualem et al.

Molecular Genetics and Genomics, 2009, 281 (1), pp.55-66. ⟨10.1007/s00438-008-0392-8⟩

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Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins.

Francisco Merchan , Adnane Boualem , Martin Crespi , Florian Frugier

Genome Biology, 2009, 10 (12), pp.R136. ⟨10.1186/gb-2009-10-12-r136⟩

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A novel plant leucine-rich repeat receptor kinase regulates the response of Medicago truncatula roots to salt stress.

Laura de Lorenzo , Francisco Merchan , Philippe Laporte , Richard Thompson , Jonathan Clarke et al.

The Plant cell, 2009, 21 (2), pp.668-80. ⟨10.1105/tpc.108.059576⟩

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A mutant ankyrin protein kinase from Medicago sativa affects Arabidopsis adventitious roots

Delphine Chinchilla , Florian Frugier , Marcela Raíces , Francisco Merchan , Verónica Giammaria et al.

Functional Plant Biology, 2008, 35 (1), ⟨10.1071/FP07209⟩

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De novo organ formation from differentiated cells: root nodule organogenesis.

Martin Crespi , Florian Frugier

Science Signaling, 2008, 1 (49), pp.re11. ⟨10.1126/scisignal.149re11⟩

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Cytokinin: secret agent of symbiosis.

Florian Frugier , Sonja Kosuta , Jeremy D Murray , Martin Crespi , Krzysztof Szczyglowski

Trends in Plant Science, 2008, 13 (3), pp.115-20. ⟨10.1016/j.tplants.2008.01.003⟩

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MicroRNA166 controls root and nodule development in Medicago truncatula.

Adnane Boualem , Philippe Laporte , Mariana Jovanovic , Carole Laffont , Julie Plet et al.

The Plant Journal, 2008, 54 (5), pp.876-87. ⟨10.1111/j.1365-313X.2008.03448.x⟩

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Differential expression of the TFIIIA regulatory pathway in response to salt stress between Medicago truncatula genotypes.

Laura de Lorenzo , Francisco Merchan , Sandrine Blanchet , Manuel Megías , Florian Frugier et al.

Plant Physiology, 2007, 145 (4), pp.1521-32. ⟨10.1104/pp.107.106146⟩

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Riboregulators in plant development.

P. Laporte , F. Merchan , B. B. Amor , S. Wirth , M. Crespi

Biochemical Society Transactions, 2007, 35 (Pt 6), pp.1638-42. ⟨10.1042/BST0351638⟩

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Identification of regulatory pathways involved in the reacquisition of root growth after salt stress in Medicago truncatula.

Francisco Merchan , Laura De Lorenzo , Silvina González Rizzo , Andreas Niebel , Hamid Manyani et al.

The Plant Journal, 2007, 51 (1), pp.1-17. ⟨10.1111/j.1365-313X.2007.03117.x⟩

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Cross-talk between ethylene and drought signalling pathways is mediated by the sunflower Hahb-4 transcription factor.

Pablo A Manavella , Agustín L Arce , Carlos A Dezar , Frédérique Bitton , Jean-Pierre Renou et al.

The Plant Journal, 2006, 48 (1), pp.125-137. ⟨10.1111/j.1365-313X.2006.02865.x⟩

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Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts

Judith Hirsch , Vincent Lefort , Marion Vankersschaver , Adnane Boualem , Antoine Lucas et al.

Plant Physiology, 2006, 140 (4), pp.1192-1204. ⟨10.1104/pp.105.073817⟩

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A CDPK isoform participates in the regulation of nodule number in Medicago truncatula

Pablo Gargantini , Silvina Gonzalez-Rizzo , Delphine Chinchilla , Marcela Raíces , Verónica Giammaria et al.

The Plant Journal, 2006, 48 (6), pp.843 - 856. ⟨10.1111/j.1365-313X.2006.02910.x⟩

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MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula.

Jean-Philippe Combier , Florian Frugier , Françoise de Billy , Adnane Boualem , Fikri El-Yahyaoui et al.

Genes and Development, 2006, 20 (22), pp.3084-8. ⟨10.1101/gad.402806⟩

Article dans une revue hal-00121505v1

The Medicago truncatula CRE1 cytokinin receptor regulates lateral root development and early symbiotic interaction with Sinorhizobium meliloti.

Silvina Gonzalez-Rizzo , Martin Crespi , Florian Frugier

The Plant cell, 2006, 18 (10), pp.2680-93. ⟨10.1105/tpc.106.043778⟩

Article dans une revue hal-00123705v1

GuaB Activity Is Required in Rhizobium tropici During the Early Stages of Nodulation of Determinate Nodules but Is Dispensable for the Sinorhizobium meliloti–Alfalfa Symbiotic Interaction.

Mónica Collavino , Pablo M. Riccillo , Daniel H. Grasso , Martín Crespi , O. Mario Aguilar

Molecular Plant-Microbe Interactions, 2005, 18, pp.742-750. ⟨10.1094/MPMI-18-0742⟩

Article dans une revue hal-00019588v1

Role of plasmodesmata regulation in plant development

Arnaud Complainville , Martin Crespi

Advances in Botanical Research, 2004, 41, pp.195-243. ⟨10.1016/S0065-2296(04)41005-2⟩

Article dans une revue hal-00123141v1

Enod40, a short open reading frame-containing mRNA, induces cytoplasmic localization of a nuclear RNA binding protein in Medicago truncatula.

Anna Campalans , Adam Kondorosi , Martin Crespi

The Plant cell, 2004, 16 (4), pp.1047-59. ⟨10.1105/tpc.019406⟩

Article dans une revue hal-00122324v1

Phytohormonal responses in enod40-overexpressing plants of Medicago truncatula and rice.

Moul Dey , Arnaud Complainville , Celine Charon , Lina Torrizo , Adam Kondorosi et al.

Physiologia Plantarum, 2004, 120 (1), pp.132-139. ⟨10.1111/j.0031-9317.2004.0208.x⟩

Article dans une revue istex hal-00122910v1

Ankyrin protein kinases: A novel type of plant kinase genes whose expression is induced byosmotic stress in alfalfa

Delphine Chinchilla , Francisco Merchan , Manuel Megias , Adam Kondorosi , Carolina Sousa et al.

Plant Molecular Biology, 2003, 51 (4), pp.555-566. ⟨10.1023/A:1022337221225⟩

Article dans une revue istex hal-00134566v1

StCDPK1 is expressed in potato stolon tips and is induced by high sucrose concentration.

Marcela Raíces , Rita M Ulloa , Gustavo C Macintosh , Martín Crespi , María T Téllez-Iñón

J Exp Bot, 2003, 54 (392), pp.2589-91. ⟨10.1093/jxb/erg282⟩

Article dans une revue hal-00122891v1

Nodule initiation involves the creation of a new symplasmic field in specific root cells of medicago species.

Arnaud Complainville , Lysiane Brocard , Ian Roberts , Edna Dax , Noa Sever et al.

The Plant cell, 2003, 15 (12), pp.2778-91. ⟨10.1105/tpc.017020⟩

Article dans une revue hal-00134893v1

Characterisation of plant genes involved in giant cells formation induced by root-knot nematodes in Arabidopsis thaliana and Medicago truncatula

Bruno Favery , F. Jammes , Philippe Lecomte , A. Complainville , J.M. Vinardell et al.

Nematology Monographs and Perspectives, 2003, 2 (1-8), pp.1-8

Article dans une revue hal-02677542v1
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The endosymbiosis-induced genes ENOD40 and CCS52a are involved in endoparasitic-nematode interactions in Medicago truncatula

Bruno Favery , A. Complainville , J.M. Vinardell , Philippe Lecomte , D. Vaubert et al.

Molecular Plant-Microbe Interactions, 2002, 15 (10), pp.1008-1013. ⟨10.1094/MPMI.2002.15.10.1008⟩

Article dans une revue hal-02675677v1

The endosymbiosis-induced genes ENOD40 and CCS52a are involved in endoparasitic-nematode interactions in Medicago truncatula.

Bruno Favery , Arnaud Complainville , Jose Maria Vinardell , Philippe Lecomte , Danièle Vaubert et al.

Molecular Plant-Microbe Interactions, 2002, 15 (10), pp.1008-13

Article dans une revue hal-00139391v1

Medicago truncatula plants overexpressing the early nodulin gene enod40 exhibit accelerated mycorrhizal colonization and enhanced formation of arbuscules

Christian Staehelin , Celine Charon , Thomas Boller , Martin Crespi , Ádám Kondorosi

Proceedings of the National Academy of Sciences of the United States of America, 2001, 98, pp.15366-15371

Article dans une revue hal-00157258v1

Translational and Structural Requirements of the Early Nodulin Gene enod40, a Short-Open Reading Frame-Containing RNA, for Elicitation of a Cell-Specific Growth Response in the Alfalfa Root Cortex

Carolina Sousa , Christina Johansson , Celine Charon , Hamid Manyani , Christof Sautter et al.

Molecular and Cellular Biology, 2001, 21, pp.354-366. ⟨10.1128/MCB.21.1.354-366.2001⟩

Article dans une revue hal-00157247v1

A Krüppel-like zinc finger protein is involved in nitrogen-fixing root nodule organogenesis.

F. Frugier , S. Poirier , B. Satiat-Jeunemaître , A. Kondorosi , M. Crespi

Genes and Development, 2000, 14 (4), pp.475-82

Article dans une revue hal-00162969v1

Oxygen regulation of a nodule-located carbonic anhydrase in alfalfa.

S. Gálvez , A. M. Hirsch , K. L. Wycoff , S. Hunt , D. B. Layzell et al.

Plant Physiology, 2000, 124 (3), pp.1059-68

Article dans une revue hal-00162981v1

Temporal and spatial order of events during the induction of cortical cell divisions in white clover by Rhizobium leguminosarum bv. trifolii inoculation or localized cytokinin addition.

U. Mathesius , C. Charon , B. G. Rolfe , A. Kondorosi , M. Crespi

Molecular Plant-Microbe Interactions, 2000, 13 (6), pp.617-28

Article dans une revue hal-00164169v1

Long ncRNAs and epigenetic regulations are attractive candidate elements for the orchestration of symbiotic gene expression in M. truncatula.

Yann Pecrix , S Evan Staton , Erika Sallet , Christine Lelandais Briere , Sandra Moreau et al.

International plant epigenetics symposium, ERC (European Research Council) and the RFI Objectif Végétal regional programme, Oct 2018, Angers, France

Communication dans un congrès hal-03355269v1
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Small RNA profiles in soybean primary root tips under water deficit

Yun Zheng , Vandana Hivrale , Xiaotuo Zhang , Babu Valliyodan , Christine Lelandais-Briere et al.

15. International Conference On Bioinformatics (InCoB) - Systems biology, Sep 2016, Queenstown, Singapore. pp.10, ⟨10.1186/s12918-016-0374-0⟩

Communication dans un congrès hal-01601655v1

High throughput sequencing identifies stage-specific miRNA populations in developing Medicago truncatula seeds

Karine Gallardo Guerrero , Gregoire G. Aubert , Christine Lelandais - Brière , Jerome Gouzy , Erika Sallet et al.

Graine 2011, 3. colloque national du Réseau Français de Biologie des Graines, Oct 2011, Nantes, France

Communication dans un congrès hal-02748933v1

Real-time RT-PCR Profiling of Over1400 Medicago truncatula transcription factors during seed filling

Jérôme Verdier , Clementina Kakar , Karine Gallardo , Christine Le Signor , Gregoire G. Aubert et al.

3. International Conference on Legume Genomics and Genetics, Apr 2006, Brisbane, Australia

Communication dans un congrès hal-02752651v1

Analyse des profils d'expression de plus de 1000 facteurs de transcription au cours du remplissage de la graine chez M. truncaltula par PCR quantitative en temps réel

Jérôme Verdier , Clementina Kakar , Karine Gallardo , Christine Le Signor , Gregoire G. Aubert et al.

12. Forum des jeunes chercheurs, Jun 2006, Besançon, France

Communication dans un congrès hal-02750691v1

Real-time RT-PCR profiling of all annotated Medicago truncatula transcription factors during seed filling

Jérôme Verdier , Karine Gallardo , Christine Le Signor , Samia Djennane , Gregoire G. Aubert et al.

Model Legume Congress 2005, Jun 2005, Asilomar, United States

Communication dans un congrès hal-02762487v1
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Plant genes involved in giant cells formation induced by root-knot nematodes in Arabidopsis and Medicago

Bruno Favery , Fabien Jammes , Liudmila L. Chelysheva , Philippe Lecomte , Arnaud Complainville et al.

11. International Congress, Jul 2003, Saint-Petersbourg, Russia

Communication dans un congrès hal-02761636v1

Characterisation of plant genes involved in giant cells formation induced by root-knot nematodes in Arabidopsis thaliana and Medicago truncatula

Bruno Favery , Fabien Jammes , Philippe Lecomte , Arnaud Complainville , José Maria Vinardell et al.

4. International Nematology Congress, Jun 2002, Tenerife, Spain

Communication dans un congrès hal-02760113v1
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Les apports de la génomique à l'agroécologie

Isabelle Hippolyte , Emmanuel Guiderdoni , Jannatul Mia , Bernard Hubert , Martin Crespi et al.

Isabelle Hippolyte, Emmanuel Guiderdoni, Jannatul Mia, Bernard Hubert. 12, 70 p., 2020, Les Cahiers de l'ANR

Ouvrages hal-02940745v1

Stable Inactivation of MicroRNAs in Medicago truncatula Roots

Hélène Proust , Jérémie Bazin , Céline Sorin , Caroline Hartmann , Martin Crespi et al.

Methods in Molecular Biology, 1822, Humana Press Inc., pp.123-132, 2018, Methods in Molecular Biology, 978-1-4939-8633-0; 978-1-4939-8632-3. ⟨10.1007/978-1-4939-8633-0_9⟩

Chapitre d'ouvrage hal-02383697v1

CircRNAs in Plants

Xuelei Lai , Jérémie Bazin , Stuart Webb , Martin Crespi , Chloe Zubieta et al.

J. Xiao. Circular RNAs. Series: Advances in Experimental Medicine and Biology, 1087, Springer, pp.329-343, 2018, Advances in Experimental Medicine and Biology, 978-981-13-1426-1; 978-981-13-1425-4. ⟨10.1007/978-981-13-1426-1_26⟩

Chapitre d'ouvrage hal-02193011v1

Root Development in Medicago truncatula: Lessons from Genetics to Functional Genomics

Hélène Proust , Caroline Hartmann , Martin Crespi , Christine Lelandais-Brière

Methods in Molecular Biology, 1822, Humana Press Inc., pp.205-239, 2018, Methods in Molecular Biology, 978-1-4939-8633-0; 978-1-4939-8632-3. ⟨10.1007/978-1-4939-8633-0_15⟩

Chapitre d'ouvrage hal-02383696v1

Plant epigenetics: Non-coding RNAs as emerging regulators

Juan Sebastian Ramirez Prado , Federico Ariel , Moussa Benhamed , Martin Crespi

Plant Epigenetics, Springer International Publishing, 536 p., 2017, RNA Technologies, 978-3-319-55519-5 978-3-319-55520-1. ⟨10.1007/978-3-319-55520-1_7⟩

Chapitre d'ouvrage hal-02788580v1

Immunolocalization

B. Hause , F. Frugier , M. Crespi

Medicago truncatula handbook, The Samuel Roberts Noble Foundation, Inc., pp.1-11, 2007

Chapitre d'ouvrage hal-00178263v1

Response of Medicago truncatula to Salt stress

F. Merchan , M. Crespi , F. Frugier

Medicago truncatula handbook, The Samuel Roberts Noble Foundation, Inc., pp.13-16, 2007

Chapitre d'ouvrage hal-00178267v1

Functional analysis of regulatory genes involved in M. truncatula nodule organogenesis.

M. Crespi , A; Complainville , D. Chinchilla , F. Merchan , A. Campalans et al.

T. Finan, M. R. O'Brian, D. B. Layzell, J. K. Vessey. Nitrogen Fixation: Global Perspectives, C.A.B. I. Publishing, pp.179-183, 2002

Chapitre d'ouvrage hal-00147549v1

Control of root nodule organogenesis

A. Kondorosi , C. Charon , A. Cebolla , J.M. Vinardell , F. Frugier et al.

Biology of Plant-Microbe Interactions, IS-MPMI International Society for Molecular Plant-Microbe Interactions, pp.158-163, 2002

Chapitre d'ouvrage hal-00147561v1

Cell cycle control in root nodule organogenesis

A. Kondorosi , A. Cebolla , C. Charon , F. Foucher , J. Gyorgyey et al.

F. O. Pedrosa M. Hungria G. Yates W. E. Newton. Nitrogen Fixation: From Molecules to Crop Productivity, Kluwer Academic Publishers, pp.223-226, 2000, CURRENT PLANT SCIENCE AND BIOTECHNOLOGY IN AGRICULTURE Volume 38

Chapitre d'ouvrage hal-00165966v1

ChronoRoot 2.0: An Open AI-Powered Platform for 2D Temporal Plant Phenotyping

Nicolás Gaggion , Rodrigo Bonazzola , María Florencia Legascue , María Florencia Mammarella , Florencia Sol Rodriguez et al.

2025

Pré-publication, Document de travail hal-05409929v1
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What Large Language Models Know About Plant Molecular Biology

Manuel Fernandez Burda , Lucia Ferrero , Nicolás Gaggion , Camille Fonouni-Farde , Martín Crespi et al.

2025

Pré-publication, Document de travail hal-05306023v1

The Arabidopsis RNA-binding protein SGS3 is recruited to the chromatin remodeler CHR11 to promote siRNA production from protein-coding genes

Taline Elmayan , Thomas Blein , Emilie Elvira-Matelot , Ivan Le Masson , Aurélie Christ et al.

2024

Pré-publication, Document de travail hal-04729123v1

Sequence-unrelated long noncoding RNAs converged to modulate the activity of conserved epigenetic machineries across kingdoms

Camille Fonouni-Farde , Aurélie Christ , Thomas Blein , Juan Sebastián Ramírez-Prado , María Florencia Legascue et al.

2021

Pré-publication, Document de travail hal-03432759v1
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The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA

Thomas Roulé , Federico Ariel , Caroline Hartmann , Jose Gutierrez-Marcos , Nosheen Hussain et al.

2020

Pré-publication, Document de travail hal-03016338v1
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ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

Nicolás Gaggion , Federico Ariel , Vladimir Daric , Eric Lambert , Simon Legendre et al.

2020

Pré-publication, Document de travail hal-03016324v1
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Identification and functional prediction of anthocyanin biosynthesis regulatory long non-coding RNAs (lncRNAs) in carrot

Constanza Chialva , Thomas Blein , Martin Crespi , Diego Lijavetzky

2020

Pré-publication, Document de travail hal-03016329v1

Two ecotype-related long non-coding RNAs in the environmental control of root growth

Thomas Blein , Coline Balzergue , Thomas Roulé , Marc Gabriel , Laetitia Scalisi et al.

2019

Pré-publication, Document de travail hal-02399291v1

Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis

Jérémie Bazin , Kiruthiga Mariappan , Thomas Blein , Ronny Voelz , Martin Crespi et al.

2019

Pré-publication, Document de travail hal-02399302v1
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Genome sequence of the cluster root forming white lupin;

Barbara Hufnagel , André Marques , Alexandre Soriano , Laurence Marquès , Fanchon Divol et al.

2019

Pré-publication, Document de travail (preprint/prepublication) hal-02790529v1

Biologie intégrative des organismes photosynthétiques et micro-organismes associés

Cécile Raynaud , Laurent Nussaume , Fabrice Besnard , Ugo Cenci , Daniel Clesse et al.

CNRS - Biologie intégrative des organismes photosynthétiques et micro-organismes associés (Section 23). 2025, pp.381-389

Rapport (rapport d’expertise collective) hal-05492655v1