MC

Martin Crespi

165
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Publications

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The transcription factor NF-YA10 determines the area explored by Arabidopsis thaliana roots through direct regulation of LAZY and TAC genes

Andana Barrios , Nicolas Gaggion , Natanael Mansilla , Leandro Lucero , Thomas Blein et al.
The Plant Journal, 2025, 121 (5), pp.e70016. ⟨10.1101/2023.04.26.538431⟩
Article dans une revue hal-04299899 v1

Arabidopsis SGS3 is recruited to chromatin by CHR11 to select RNA that initiate siRNA production

Taline Elmayan , Thomas Blein , Emilie Elvira-Matelot , Ivan Le Masson , Aurélie Christ et al.
Nature Communications, 2025, 16 (1), pp.2978. ⟨10.1038/s41467-025-57394-5⟩
Article dans une revue hal-05012332 v1
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An atlas of the tomato epigenome reveals that KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac distribution

Jing An , Rim Brik Chaouche , Leonardo Pereyra-Bistraín , Hugo Zalzalé , Qingyi Wang et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (28), pp.e2400737121. ⟨10.1073/pnas.2400737121⟩
Article dans une revue hal-04731984 v1

Epigenetic control during root development and symbiosis

María Eugenia Zanetti , Flavio Blanco , Milagros Ferrari , Federico Ariel , Matthias Benoit et al.
Plant Physiology, 2024, 196, pp.697-710. ⟨10.1093/plphys/kiae333⟩
Article dans une revue hal-04646016 v1
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Genetic–epigenetic interplay in the determination of plant 3D genome organization

Xiaoning He , Chloé Dias Lopes , Leonardo I Pereyra-Bistrain , Ying Huang , Jing An et al.
Nucleic Acids Research, 2024, 52 (17), pp.10220-10234. ⟨10.1093/nar/gkae690⟩
Article dans une revue hal-04672636 v1

A lateral organ boundaries domain transcription factor acts downstream of the auxin response factor 2 to control nodulation and root architecture in Medicago truncatula

Cristina Kirolinko , Karen Hobecker , Marianela Cueva , Florencia Botto , Aurélie Christ et al.
New Phytologist, 2024, ⟨10.1111/nph.19766⟩
Article dans une revue hal-04567150 v1

Long non-coding RNAs reveal new regulatory mechanisms controlling gene expression

Martin Crespi
Comptes Rendus. Biologies, 2023, 345 (4), pp.15-39. ⟨10.5802/crbiol.106⟩
Article dans une revue hal-04313170 v1
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Transcription factors KANADI 1, MYB DOMAIN PROTEIN 44, and PHYTOCHROME INTERACTING FACTOR 4 regulate long intergenic noncoding RNAs expressed in Arabidopsis roots

Li Liu , Michel Heidecker , Thomas Depuydt , Nicolas Manosalva Perez , Martin Crespi et al.
Plant Physiology, 2023, 193 (3), pp.1933-1953. ⟨10.1093/plphys/kiad360⟩
Article dans une revue hal-04299815 v1
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HSFA1a modulates plant heat stress responses and alters the 3D chromatin organization of enhancer-promoter interactions

Ying Huang , Jing An , Sanchari Sircar , Clara Bergis , Chloé Dias Lopes et al.
Nature Communications, 2023, 14, ⟨10.1038/s41467-023-36227-3⟩
Article dans une revue hal-04062805 v1
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The long intergenic noncoding RNA ARES modulates root architecture in Arabidopsis

Thomas Roulé , María Florencia Legascue , Andana Barrios , Nicolás Gaggion , Martin Crespi et al.
IUBMB Life, 2023, 75 (10), pp.880-892. ⟨10.1002/iub.2761⟩
Article dans une revue hal-04299803 v1
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Dynamics of ribosome composition and ribosomal protein phosphorylation in immune signaling in Arabidopsis thaliana

Anna Siodmak , Federico Martinez-Seidel , Naganand Rayapuram , Jeremie Bazin , Hanna Alhoraibi et al.
Nucleic Acids Research, 2023, 51 (21), pp.11876-11892. ⟨10.1093/nar/gkad827⟩
Article dans une revue hal-04495163 v1
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Synergistic action of the Arabidopsis spliceosome components PRP39a and SmD1b in promoting posttranscriptional transgene silencing

Jérémie Bazin , Emilie Elvira-Matelot , Thomas Blein , Vincent Jauvion , Nathalie Bouteiller et al.
The Plant cell, 2023, 35 (6), pp.1917-1935. ⟨10.1093/plcell/koad091⟩
Article dans une revue hal-04298436 v1

Pathogen-induced m6A dynamics affect plant immunity

Wil Prall , Arsheed Sheikh , Jeremie Bazin , Jean Bigeard , Marilia Almeida-Trapp et al.
The Plant cell, 2023, 35 (11), pp.4155-4172. ⟨10.1093/plcell/koad224⟩
Article dans une revue hal-04495080 v1

Spotlight: Antisense regulation of miRNA action during phosphate starvation

Soledad Traubenik , Martin Crespi
Molecular Plant, 2023, 16 (8), pp.1249-1251. ⟨10.1016/j.molp.2023.07.013⟩
Article dans une revue hal-04600689 v1
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The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA

Thomas Roulé , Aurelie Christ , Nosheen Hussain , Ying Huang , Caroline Hartmann et al.
Molecular Plant, 2022, 15 (5), pp.1-58. ⟨10.1016/j.molp.2022.02.007⟩
Article dans une revue hal-03698779 v1

The Rice Serine/Arginine Splicing Factor RS33 Regulates Pre-mRNA Splicing during Abiotic Stress Responses

Haroon Butt , Jeremie Bazin , Kasavajhala Prasad , Nourelislam Awad , Martin Crespi et al.
Cells, 2022, 11 (11), pp.1796. ⟨10.3390/cells11111796⟩
Article dans une revue hal-04313167 v1
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The Arabidopsis APOLO and human UPAT sequence-unrelated long noncoding RNAs can modulate DNA and histone methylation machineries in plants

Camille Fonouni-Farde , Aurélie Christ , Thomas Blein , María Florencia Legascue , Lucía Ferrero et al.
Genome Biology, 2022, 23 (1), pp.181. ⟨10.1186/s13059-022-02750-7⟩
Article dans une revue hal-03768549 v1

Non-B DNA structures emerging from plant genomes

Martin Crespi , Federico Ariel
Trends in Plant Science, 2022, 27 (7), pp.624-626. ⟨10.1016/j.tplants.2022.03.004⟩
Article dans une revue hal-04313171 v1

A conserved HSF :miR169: NF‐YA loop involved in tomato and Arabidopsis heat stress tolerance

Sombir Rao , Apoorva Gupta , Chandni Bansal , Celine Sorin , Martin Crespi et al.
The Plant Journal, 2022, 112 (1), pp.7-26. ⟨10.1111/tpj.15963⟩
Article dans une revue hal-04305855 v1
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Silencing the conserved small nuclear ribonucleoprotein SmD1 target gene alters susceptibility to root-knot nematodes in plants

Joffrey Mejias , Yongpan Chen , Jérémie Bazin , Nhat-My Truong , Karine Mulet et al.
Plant Physiology, 2022, 189 (3), pp.1741-1756. ⟨10.1093/plphys/kiac155⟩
Article dans une revue hal-03879983 v1

A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

Runxuan Zhang , Richard Kuo , Max Coulter , Cristiane Calixto , Juan Carlos Entizne et al.
Genome Biology, 2022, 23 (1), pp.149. ⟨10.1186/s13059-022-02711-0⟩
Article dans une revue hal-04313162 v1
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Regulatory long non-coding RNAs in root growth and development

Thomas Roulé , Martin Crespi , Thomas Blein
Biochemical Society Transactions, 2021, pp.1-18. ⟨10.1042/BST20210743⟩
Article dans une revue hal-03555826 v1
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Insights into long non-coding RNA regulation of anthocyanin carrot root pigmentation

Constanza Chialva , Thomas Blein , Martin Crespi , Diego Lijavetzky
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-83514-4⟩
Article dans une revue hal-03324569 v1
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ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

Nicolás Gaggion , Federico Ariel , Vladimir Daric , Eric Lambert , Simon Legendre et al.
GigaScience, 2021, 10 (7), pp.giab052. ⟨10.1093/gigascience/giab052⟩
Article dans une revue hal-03324566 v1
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Polycomb-dependent differential chromatin compartmentalization determines gene co-regulation in Arabidopsis

Ying Huang , Sanchari Sicar , Juan S Ramirez-Prado , Deborah Manza-Mianza , Javier Antunez-Sanchez et al.
Genome Research, 2021, 31 (7), pp.1-63. ⟨10.1101/gr.273771.120⟩
Article dans une revue hal-03469045 v1

The lncRNA APOLO interacts with the transcription factor WRKY42 to trigger root hair cell expansion in response to cold

Michaël Moison , Javier Martínez Pacheco , Leandro Lucero , Camille Fonouni-Farde , Johan Rodríguez-Melo et al.
Molecular Plant, 2021, 14 (6), pp.937-948. ⟨10.1016/j.molp.2021.03.008⟩
Article dans une revue hal-03331698 v1
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Plant Long Noncoding RNAs: New Players in the Field of Post-Transcriptional Regulations

Camille Fonouni-Farde , Federico Ariel , Martin Crespi
Non-Coding RNA, 2021, 7 (1), pp.1-15. ⟨10.3390/ncrna7010012⟩
Article dans une revue (article de synthèse) hal-03334157 v1
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The root‐knot nematode effector MiEFF18 interacts with the plant core spliceosomal protein SmD1 required for giant cell formation

Joffrey Mejias , Jérémie Bazin , Nhat‐my Truong , Yongpan Chen , Nathalie Marteu et al.
New Phytologist, 2021, 229 (6), pp.3408-3423. ⟨10.1111/nph.17089⟩
Article dans une revue hal-03148749 v1
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Overlapping roles of spliceosomal components SF3B1 and PHF5A in rice splicing regulation

Haroon Butt , Jeremie Bazin , Sahar Alshareef , Ayman Eid , Moussa Benhamed et al.
Communications Biology, 2021, 4 (1), ⟨10.1038/s42003-021-02051-y⟩
Article dans une revue hal-03331718 v1

High-quality genome sequence of white lupin provides insight into soil exploration and seed quality

Bárbara Hufnagel , André Marques , Alexandre Soriano , Laurence Marquès , Fanchon Divol et al.
Nature Communications, 2020, 11 (1), pp.492. ⟨10.1038/s41467-019-14197-9⟩
Article dans une revue hal-04721448 v1

R-Loop Mediated trans Action of the APOLO Long Noncoding RNA

Federico Ariel , Leandro Lucero , Aurelie Christ , Maria Florencia Mammarella , Teddy Jegu et al.
Molecular Cell, 2020, 77 (5), pp.1055-1065. ⟨10.1016/j.molcel.2019.12.015⟩
Article dans une revue hal-02964078 v1
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High-quality genome sequence of white lupin provides insight into soil exploration and seed quality

Barbara Hufnagel , André Marques , Alexandre Soriano , Laurence Marquès , Fanchon Divol et al.
Nature Communications, 2020, 11 (1), pp.492. ⟨10.1038/s41467-019-14197-9⟩
Article dans une revue hal-02460008 v1

Evolution of the Small Family of Alternative Splicing Modulators Nuclear Speckle RNA-Binding Proteins in Plants

Leandro Lucero , Jeremie Bazin , Johan Rodriguez Melo , Fernando Ibañez , Martín Crespi et al.
Genes, 2020, 11 (2), pp.207. ⟨10.3390/genes11020207⟩
Article dans une revue hal-02958706 v1
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GCN5 modulates salicylic acid homeostasis by regulating H3K14ac levels at the 5′ and 3′ ends of its target genes

Soonkap Kim , Sophie Piquerez , Juan Ramirez-Prado , Emmanouil Mastorakis , Alaguraj Veluchamy et al.
Nucleic Acids Research, 2020, 48 (11), pp.5953-5966. ⟨10.1093/nar/gkaa369⟩
Article dans une revue hal-02889481 v1

The Arabidopsis lnc RNA ASCO modulates the transcriptome through interaction with splicing factors

Richard Rigo , Jérémie Bazin , Natali Romero‐barrios , Michaël Moison , Leandro Lucero et al.
EMBO Reports, 2020, 21 (5), pp.1-19. ⟨10.15252/embr.201948977⟩
Article dans une revue hal-02991642 v1
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Landscape of the Noncoding Transcriptome Response of Two Arabidopsis Ecotypes to Phosphate Starvation

Thomas Blein , Coline Balzergue , Thomas Roulé , Marc Gabriel , Laetitia Scalisi et al.
Plant Physiology, 2020, 183 (3), pp.1058-1072. ⟨10.1104/pp.20.00446⟩
Article dans une revue cea-02962421 v1
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Wheat chromatin architecture is organized in genome territories and transcription factories

Lorenzo Concia , Alaguraj Veluchamy , Juan Ramirez-Prado , Azahara Martin-Ramirez , Ying Huang et al.
Genome Biology, 2020, 21 (1), pp.1-20. ⟨10.1186/s13059-020-01998-1⟩
Article dans une revue hal-02571325 v1

To keep or not to keep: mRNA stability and translatability in root nodule symbiosis

María Eugenia Zanetti , Flavio Blanco , Mauricio Reynoso , Martín Crespi
Current Opinion in Plant Biology, 2020, 56, pp.109-117. ⟨10.1016/j.pbi.2020.04.012⟩
Article dans une revue hal-03216724 v1
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Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis

Jérémie Bazin , Kiruthiga G Mariappan , Yunhe Jiang , Thomas Blein , Ronny Voelz et al.
PLoS Pathogens, 2020, 16 (4), pp.e1008401. ⟨10.1371/journal.ppat.1008401⟩
Article dans une revue hal-03015159 v1

Long noncoding RNAs shape transcription in plants

Leandro Lucero , Camille Fonouni-Farde , Martin Crespi , Federico Ariel
Transcription, 2020, 11 (3-4), pp.160-171. ⟨10.1080/21541264.2020.1764312⟩
Article dans une revue (article de synthèse) hal-03217920 v1

Plant transcription links environmental cues and phenotypic plasticity

M. Crespi
Transcription, 2020, 11 (3-4), pp.97-99. ⟨10.1080/21541264.2020.1837498⟩
Article dans une revue hal-03215156 v1
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Heterocyst formation under the control of a cell-specific antisense RNA

Diana Kirilovsky , Martin Crespi
Plant and Cell Physiology, 2019, 60 (8), pp.1631-1632. ⟨10.1093/pcp/pcz140⟩
Article dans une revue hal-02617907 v1
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Assessing the Response of Small RNA Populations to Allopolyploidy Using Resynthesized Brassica napus Allotetraploids

Paulina Martinez Palacios , Marie-Pierre Jacquemot , Marion Tapie , Agnes Rousselet , Mamoudou Diop et al.
Molecular Biology and Evolution, 2019, 36 (4), pp.709-726. ⟨10.1093/molbev/msz007⟩
Article dans une revue hal-02383691 v1

RNA-Mediated Plant Behavior

Misato Ohtani , Yukio Kurihara , Motoaki Seki , Martin Crespi
Plant and Cell Physiology, 2019, 60 (9), pp.1893 - 1896. ⟨10.1093/pcp/pcz168⟩
Article dans une revue hal-02619316 v1

Alternative Splicing in the Regulation of Plant–Microbe Interactions

Richard Rigo , Jérémie Bazin , Martin Crespi , Céline Charon
Plant and Cell Physiology, 2019, 60 (9), pp.1906-1916. ⟨10.1093/pcp/pcz086⟩
Article dans une revue hal-02383689 v1
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CRISPR directed evolution of the spliceosome for resistance to splicing inhibitors

Haroon Butt , Ayman Eid , Afaque Momin , Jérémie Bazin , Martin Crespi et al.
Genome Biology, 2019, 20, pp.73. ⟨10.1186/s13059-019-1680-9⟩
Article dans une revue hal-02383690 v1
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Arabidopsis HEAT SHOCK TRANSCRIPTION FACTORA1b regulates multiple developmental genes under benign and stress conditions

Waleed Albihlal , Irabonosi Obomighie , Thomas Blein , Ramona Persad , Igor Chernukhin et al.
Journal of Experimental Botany, 2018, 69 (11), pp.2847-2862. ⟨10.1093/jxb/ery142⟩
Article dans une revue hal-02379644 v1

Thermopriming triggers splicing memory in Arabidopsis

Yu Ling , Natalia Serrano , Ge Gao , Mohamed Atia , Morad Mokhtar et al.
Journal of Experimental Botany, 2018, 69 (10), pp.2659-2675. ⟨10.1093/jxb/ery062⟩
Article dans une revue hal-02383699 v1
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Nuclear Speckle RNA Binding Proteins Remodel Alternative Splicing and the Non-coding Arabidopsis Transcriptome to Regulate a Cross-Talk Between Auxin and Immune Responses

Jérémie Bazin , Natali Romero , Richard Rigo , Céline Charon , Thomas Blein et al.
Frontiers in Plant Science, 2018, 9, pp.1209. ⟨10.3389/fpls.2018.01209⟩
Article dans une revue hal-02379622 v1

Whole-genome landscape of Medicago truncatula symbiotic genes

Yann Pecrix , S. Evan Staton , Erika Sallet , Christine Lelandais-Brière , Sandra Moreau et al.
Nature Plants, 2018, 4 (12), pp.1017-1025. ⟨10.1038/s41477-018-0286-7⟩
Article dans une revue hal-04779324 v1
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Splicing regulation by long noncoding RNAs

Natali Romero Barrios , Maria Florencia Legascue , Moussa Benhamed , Federico Ariel , Martin Crespi
Nucleic Acids Research, 2018, 46 (5), pp.2169-2184. ⟨10.1093/nar/gky095⟩
Article dans une revue hal-02625980 v1
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The <em>Arabidopsis</em> SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility

Teddy Jegu , Alaguraj Veluchamy , Juan Sebastien Ramirez Prado , Charley Rizzi Paillet , Magali Perez et al.
Genome Biology, 2017, 18, pp.114. ⟨10.1186/s13059-017-1246-7⟩
Article dans une revue hal-02627578 v1
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The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution

Hélène Badouin , Jerome Gouzy , Christopher Grassa , Florent Murat , S Evan Staton et al.
Nature, 2017, 546 (7656), pp.148-152. ⟨10.1038/nature22380⟩
Article dans une revue hal-01603287 v1

The microRNA390/TAS3 pathway mediates symbiotic nodulation and lateral root growth

Karen Vanesa Hobecker , Mauricio Alberto Reynoso , Pilar Bustos-Sanmamed , Jiangqi Wen , Kirankumar S. Mysore et al.
Plant Physiology, 2017, 174 (4), pp.2469-2486. ⟨10.1104/pp.17.00464⟩
Article dans une revue hal-02629133 v1

TMV induces RNA decay pathways to modulate gene silencing and disease symptoms

Gabriela Conti , Diego Zavallo , Andrea L. Venturuzzi , Maria C. Rodriguez , Martin Crespi et al.
The Plant Journal, 2017, 89 (1), pp.73 - 84. ⟨10.1111/tpj.13323⟩
Article dans une revue hal-01604785 v1

Alternative splicing: the lord of the rings

Federico Ariel , Martin Crespi
Nature Plants, 2017, 3, pp.17065. ⟨10.1038/nplants.2017.65⟩
Article dans une revue hal-02624324 v1
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Global analysis of ribosome-associated noncoding RNAs unveils new modes of translational regulation

Jérémie Bazin , Katja Baerenfaller , Sager J. Gosai , Brian D. Gregory , Martin Crespi et al.
Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (46), pp.E10018-E10027. ⟨10.1073/pnas.1708433114⟩
Article dans une revue hal-02622544 v1

Antisense movement on the clock

Jérémie Bazin , Martin Crespi
New Phytologist, 2017, 216 (3), pp.626-628. ⟨10.1111/nph.14769⟩
Article dans une revue hal-02617740 v1
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LHP1 regulates H3K27me3 spreading and shapes the three-dimensional conformation of the arabidopsis genome

Alaguraj Veluchamy , Teddy Jegu , Federico Damian Ariel , David Latrasse , Kiruthiga Gayathri Mariappan et al.
PLoS ONE, 2016, 11 (7), pp.1-25. ⟨10.1371/journal.pone.0158936⟩
Article dans une revue hal-01602849 v1

Noncoding RNAs, emerging regulators in root endosymbioses

Christine Lelandais Briere , Jeremy Moreau , Caroline Hartmann , Martin Crespi
Molecular Plant-Microbe Interactions, 2016, 29 (3), pp.170-180. ⟨10.1094/MPMI-10-15-0240-FI⟩
Article dans une revue hal-02631079 v1

The nuclear ribonucleoprotein smd1 interplays with splicing, rna quality control, and posttranscriptional gene silencing in arabidopsis

Emilie Elvira-Matelot , Florian Bardou , Federico Ariel , Vincent V. Jauvion , Nathalie N. Bouteiller et al.
The Plant cell, 2016, 28 (2), pp.426-438. ⟨10.1105/tpc.15.01045⟩
Article dans une revue hal-02637465 v1

Arabidopsis CLAVATA1 and CLAVATA2 receptors contribute to <em>Ralstonia solanacearum</em> pathogenicity through a miR169-dependent pathway

Mathieu Hanemian , Xavier X. Barlet , Céline Sorin , Koste A. Yadeta , Harald Keller et al.
New Phytologist, 2016, 211 (2), pp.502-515. ⟨10.1111/nph.13913⟩
Article dans une revue hal-02636021 v1

One gene, many proteins: mapping cell-specific alternative splicing in lants

Ranjan Swarup , Martin Crespi , Malcolm Bennett
Developmental Cell, 2016, 39 (4), pp.383-385. ⟨10.1016/j.devcel.2016.11.002⟩
Article dans une revue hal-01602941 v1

Detection of generic differential RNA processing events from RNA-seq data

van Du T Tran , Oussema Souiai , Natali Romero-Barrios , Martin Crespi , Daniel Gautheret
RNA Biology, 2016, 13 (1), pp.59 - 67. ⟨10.1080/15476286.2015.1118604⟩
Article dans une revue hal-01412593 v1

Put your 3D glasses on: plant chromatin is on show

Natalia Y. Rodriguez-Granados , Juan S. Ramirez-Prado , Alaguraj Veluchamy , David Latrasse , Cécile Raynaud et al.
Journal of Experimental Botany, 2016, 67 (11), pp.3205-3221. ⟨10.1093/jxb/erw168⟩
Article dans une revue hal-02636519 v1
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A SWI/SNF Chromatin Remodelling Protein Controls Cytokinin Production through the Regulation of Chromatin Architecture

Teddy Jegu , Séverine Domenichini , Thomas Blein , Federico Ariel , Aurélie Christ et al.
PLoS ONE, 2015, 10 (10), pp.e0138276. ⟨10.1371/journal.pone.0138276⟩
Article dans une revue hal-02379647 v1

The chloroplastic DEVH-box RNA helicase Increased Size Exclusion Limit 2 involved in plasmodesmata regulation is required for group II intron splicing

Nicolas Carlotto , Sonia Wirth , Nicolas Furman , Nazarena Ferreyra Solari , Federico Ariel et al.
Plant, Cell and Environment, 2015, 39 (1), pp.165-173. ⟨10.1111/pce.12603⟩
Article dans une revue hal-02630906 v1
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In plants, decapping prevents RDR6-dependent production of small interfering RNAs from endogenous mRNAs

Angel Martinez de Alba , Anna Beatriz Moreno , Marc Gabriel , Allison Mallory , Aurélie Christ et al.
Nucleic Acids Research, 2015, 43 (5), pp.2902-2913. ⟨10.1093/nar/gkv119⟩
Article dans une revue hal-01204176 v1

Abiotic Stress Responses in Legumes: Strategies Used to Cope with Environmental Challenges

Susana S. Araujo , Steve Beebe , Martín Crespi , Bruno B. Delbreil , Esther M. Gonzalez et al.
Critical Reviews in Plant Sciences, 2015, 34 (1-3), pp.237 - 280. ⟨10.1080/07352689.2014.898450⟩
Article dans une revue (article de synthèse) hal-02635256 v1

Battles and hijacks: noncoding transcription in plants

Federico Ariel , Natali Romero Barrios , Teddy Jegu , Moussa Benhamed , Martin Crespi
Trends in Plant Science, 2015, 20 (6), pp.362-371. ⟨10.1016/j.tplants.2015.03.003⟩
Article dans une revue (article de synthèse) hal-02635660 v1

A phylogenetically conserved group of NF-Y transcription factors interact to control nodulation in legumes

Maël Baudin , Tom Laloum , Agnes Lepage , Carolina Ripodas , Federico Ariel et al.
Plant Physiology, 2015, 169 (4), pp.2761-2773. ⟨10.1104/pp.15.01144⟩
Article dans une revue hal-03082934 v1

A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis

Céline Sorin , Marie Declerck , Aurélie Christ , Thomas Blein , Linnan Ma et al.
New Phytologist, 2014, 202 (4), pp.1197-1211. ⟨10.1111/nph.12735⟩
Article dans une revue hal-02379657 v1

The BAF60 Subunit of the SWI/SNF Chromatin-Remodeling Complex Directly Controls the Formation of a Gene Loop at FLOWERING LOCUS C in Arabidopsis

Teddy Jégu , David Latrasse , Marianne Delarue , Heribert Hirt , Séverine Domenichini et al.
The Plant cell, 2014, 26 (2), pp.538-551. ⟨10.1105/tpc.113.114454⟩
Article dans une revue hal-02636131 v1
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The small RNA diversity from Medicago truncatula roots under biotic interactions evidences the environmental plasticity of the miRNAome.

Damien Formey , Erika Sallet , Christine Lelandais-Brière , Cécile Ben , Pilar Bustos-Sanmamed et al.
Genome Biology, 2014, 15 (9), pp.457. ⟨10.1186/s13059-014-0457-4⟩
Article dans une revue hal-02635888 v1

Long Noncoding RNA Modulates Alternative Splicing Regulators in Arabidopsis

Florian Bardou , Federico Ariel , Craig G. Simpson , Natali Romero-Barrios , Philippe Laporte et al.
Developmental Cell, 2014, 30 (2), pp.166 - 176. ⟨10.1016/j.devcel.2014.06.017⟩
Article dans une revue hal-02639339 v1

Small RNA pathways and diversity in model legumes: lessons from genomics.

Pilar Bustos-Sanmamed , Jérémie Bazin , Caroline Hartmann , Martin Crespi , Christine Lelandais-Brière
Frontiers in Plant Science, 2013, 4, pp.236. ⟨10.3389/fpls.2013.00236⟩
Article dans une revue hal-01070958 v1
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Dual function of MIPS1 as a metabolic enzyme and transcriptional regulator.

David Latrasse , Teddy Jégu , Pin-Hong Meng , Christelle Mazubert , Elodie Hudik et al.
Nucleic Acids Research, 2013, 41 (5), pp.2907-17. ⟨10.1093/nar/gks1458⟩
Article dans une revue hal-00856166 v1

Analyzing small and long RNAs in plant development using non-radioactive in situ hybridization.

Pilar Bustos-Sanmamed , Carole Laffont , Florian Frugier , Christine Lelandais-Brière , Martin Crespi
Methods in Molecular Biology, 2013, 959, pp.303-16. ⟨10.1007/978-1-62703-221-6_20⟩
Article dans une revue hal-00856162 v1

Independent activity of the homologous small regulatory RNAs AbcR1 and AbcR2 in the legume symbiont Sinorhizobium meliloti.

Omar Torres-Quesada , Vicenta Millán , Rafael Nisa-Martínez , Florian Bardou , Martín Crespi et al.
PLoS ONE, 2013, 8 (7), pp.e68147. ⟨10.1371/journal.pone.0068147⟩
Article dans une revue hal-01071577 v1

Analyzing protein distribution in plant tissues using "whole-mount" immunolocalization.

Pilar Bustos-Sanmamed , Carole Laffont , Florian Frugier , Christine Lelandais-Brière , Martin Crespi
Methods in Molecular Biology, 2013, 959, pp.317-22. ⟨10.1007/978-1-62703-221-6_21⟩
Article dans une revue hal-00856158 v1

Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis.

Virginie Jouannet , Ana Beatriz Moreno , Taline Elmayan , Hervé Vaucheret , Martin D Crespi et al.
EMBO Journal, 2012, 31 (7), pp.1704-13. ⟨10.1038/emboj.2012.20⟩
Article dans une revue hal-00856175 v1

Dual involvement of a Medicago truncatula NAC transcription factor in root abiotic stress response and symbiotic nodule senescence.

Axel de Zélicourt , Anouck Diet , Jessica Marion , Carole Laffont , Federico Ariel et al.
The Plant Journal, 2012, 70 (2), pp.220-30. ⟨10.1111/j.1365-313X.2011.04859.x⟩
Article dans une revue hal-00855577 v1

Comparative transcriptomic analysis of salt adaptation in roots of contrasting Medicago truncatula genotypes.

Ons Zahaf , Sandrine Blanchet , Axel de Zélicourt , Benoît Alunni , Julie Plet et al.
Molecular Plant, 2012, 5 (5), pp.1068-81. ⟨10.1093/mp/sss009⟩
Article dans une revue hal-00856194 v1

Two direct targets of cytokinin signaling regulate symbiotic nodulation in Medicago truncatula.

Federico Ariel , Marianne Brault-Hernandez , Carole Laffont , Emeline Huault , Mathias Brault et al.
The Plant cell, 2012, 24 (9), pp.3838-52. ⟨10.1105/tpc.112.103267⟩
Article dans une revue hal-00856169 v1

[Non-coding RNAs involved in plant responses to environmental constraints].

Christine Lelandais-Brière , Céline Sorin , Martin Crespi , Caroline Hartmann
Biologie Aujourd'hui, 2012, 206 (4), pp.313-22. ⟨10.1051/jbio/2012032⟩
Article dans une revue hal-00856181 v1

Dual RNAs in plants.

Florian Bardou , Francisco Merchan , Federico Ariel , Martin Crespi
Biochimie, 2011, 93 (11), pp.1950-4. ⟨10.1016/j.biochi.2011.07.028⟩
Article dans une revue istex hal-00856201 v1

MtCRE1-dependent cytokinin signaling integrates bacterial and plant cues to coordinate symbiotic nodule organogenesis in Medicago truncatula.

Julie Plet , Anton Wasson , Federico Ariel , Christine Le Signor , David Baker et al.
The Plant Journal, 2011, 65 (4), pp.622-33. ⟨10.1111/j.1365-313X.2010.04447.x⟩
Article dans une revue hal-00856206 v1

MicroRNAs as regulators of root development and architecture.

Ghazanfar A Khan , Marie Declerck , Céline Sorin , Caroline Hartmann , Martin Crespi et al.
Plant Molecular Biology, 2011, 77 (1-2), pp.47-58. ⟨10.1007/s11103-011-9793-x⟩
Article dans une revue istex hal-00856205 v1

Transcriptional and post-transcriptional regulation of a NAC1 transcription factor in Medicago truncatula roots.

Katrien d'Haeseleer , Griet den Herder , Carole Laffont , Julie Plet , Virginie Mortier et al.
New Phytologist, 2011, 191 (3), pp.647-61. ⟨10.1111/j.1469-8137.2011.03719.x⟩
Article dans une revue hal-00856967 v1
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A novel fry1 allele reveals the existence of a mutant phenotype unrelated to 5'->3' exoribonuclease (XRN) activities in Arabidopsis thaliana roots

Judith Hirsch , Julie Misson , Peter A Crisp , Pascale David , Vincent Bayle et al.
PLoS ONE, 2011, 6 (2), pp.e16724. ⟨10.1371/journal.pone.0016724⟩
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Cleavage of a non-conserved target by a specific miR156 isoform in root apexes of Medicago truncatula.

Loreto Naya , Ghazantar Abbas Khan , Céline Sorin , Caroline Hartmann , Martin Crespi et al.
Plant Signaling and Behavior, 2010, 5 (3), pp.328-31
Article dans une revue hal-00856232 v1
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miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth.

Elena Marin , Virginie Jouannet , Aurélie Herz , Annemarie S Lokerse , Dolf Weijers et al.
The Plant cell, 2010, 22 (4), pp.1104-17. ⟨10.1105/tpc.109.072553⟩
Article dans une revue hal-00856226 v1

A novel RNA-binding peptide regulates the establishment of the Medicago truncatula-Sinorhizobium meliloti nitrogen-fixing symbiosis.

Philippe Laporte , Béatrice Satiat-Jeunemaître , Isabel Velasco , Tibor Csorba , Willem van de Velde et al.
The Plant Journal, 2010, 62 (1), pp.24-38. ⟨10.1111/j.1365-313X.2009.04121.x⟩
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Small RNA diversity in plants and its impact in development.

Christine Lelandais-Brière , Céline Sorin , Marie Declerck , Abdelali Benslimane , Martin Crespi et al.
Curr Genomics, 2010, 11 (1), pp.14-23. ⟨10.2174/138920210790217918⟩
Article dans une revue hal-00856233 v1

The compact root architecture1 gene regulates lignification, flavonoid production, and polar auxin transport in Medicago truncatula.

Carole Laffont , Sandrine Blanchet , Catherine Lapierre , Lysiane Brocard , Pascal Ratet et al.
Plant Physiology, 2010, 153 (4), pp.1597-607. ⟨10.1104/pp.110.156620⟩
Article dans une revue hal-00856223 v1

The LOB-like transcription factor Mt LBD1 controls Medicago truncatula root architecture under salt stress.

Federico D Ariel , Anouck Diet , Martin Crespi , Raquel L Chan
Plant Signaling and Behavior, 2010, 5 (12), pp.1666-8
Article dans une revue hal-00856214 v1

Non-protein-coding RNAs and their interacting RNA-binding proteins in the plant cell nucleus.

Celine Charon , Ana Beatriz Moreno , Florian Bardou , Martin Crespi
Molecular Plant, 2010, 3 (4), pp.729-39. ⟨10.1093/mp/ssq037⟩
Article dans une revue hal-00856221 v1

Environmental regulation of lateral root emergence in Medicago truncatula requires the HD-Zip I transcription factor HB1.

Federico Ariel , Anouck Diet , Marion Verdenaud , Véronique Gruber , Florian Frugier et al.
The Plant cell, 2010, 22 (7), pp.2171-83. ⟨10.1105/tpc.110.074823⟩
Article dans une revue hal-00856219 v1

Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules.

Christine Lelandais-Brière , Loreto Naya , Erika Sallet , Fanny Calenge , Florian Frugier et al.
The Plant cell, 2009, 21 (9), pp.2780-96. ⟨10.1105/tpc.109.068130⟩
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Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses.

Besma Ben Amor , Sonia Wirth , Francisco Merchan , Philippe Laporte , Yves d'Aubenton-Carafa et al.
Genome Research, 2009, 19 (1), pp.57-69. ⟨10.1101/gr.080275.108⟩
Article dans une revue hal-00736193 v1

Plant root growth, architecture and function

Angela Hodge , Graziella Berta , Claude Doussan , Francisco Merchan , Martin Crespi
Plant and Soil, 2009, 321 (1-2), pp.153-187. ⟨10.1007/s11104-009-9929-9⟩
Article dans une revue istex hal-02668991 v1

Endogenous TasiRNAs mediate non-cell autonomous effects on gene regulation in Arabidopsis thaliana.

R. Schwab , A. Maizel , V. Ruiz-Ferrer , David Garcia , M. Bayer et al.
PLoS ONE, 2009, 4, pp.e5980
Article dans une revue hal-00400303 v1

Identification of transcription factors involved in root apex responses to salt stress in Medicago truncatula.

Véronique Gruber , Sandrine Blanchet , Anouck Diet , Ons Zahaf , Adnane Boualem et al.
Molecular Genetics and Genomics, 2009, 281 (1), pp.55-66. ⟨10.1007/s00438-008-0392-8⟩
Article dans une revue hal-00856238 v1

Endogenous TasiRNAs mediate non-cell autonomous effects on gene regulation in Arabidopsis thaliana.

Rebecca Schwab , Alexis Maizel , Virginia Ruiz-Ferrer , Damien Garcia , Martin Bayer et al.
PLoS ONE, 2009, 4 (6), pp.e5980. ⟨10.1371/journal.pone.0005980⟩
Article dans une revue hal-00856245 v1
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Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins.

Francisco Merchan , Adnane Boualem , Martin Crespi , Florian Frugier
Genome Biology, 2009, 10 (12), pp.R136. ⟨10.1186/gb-2009-10-12-r136⟩
Article dans une revue hal-00856234 v1

Identification of transcription factors involved in root apex responses to salt stress in Medicago truncatula

Véronique Gruber , Sandrine Blanchet , Anouck Diet , Ons Zahaf , Adnane Boualem et al.
Molecular Genetics and Genomics, 2009, 281 (1), pp.55-66. ⟨10.1007/s00438-008-0392-8⟩
Article dans une revue hal-03815674 v1

A novel plant leucine-rich repeat receptor kinase regulates the response of Medicago truncatula roots to salt stress.

Laura de Lorenzo , Francisco Merchan , Philippe Laporte , Richard Thompson , Jonathan Clarke et al.
The Plant cell, 2009, 21 (2), pp.668-80. ⟨10.1105/tpc.108.059576⟩
Article dans une revue hal-00856241 v1

De novo organ formation from differentiated cells: root nodule organogenesis.

Martin Crespi , Florian Frugier
Science Signaling, 2008, 1 (49), pp.re11. ⟨10.1126/scisignal.149re11⟩
Article dans une revue hal-00856254 v1

A mutant ankyrin protein kinase from Medicago sativa affects Arabidopsis adventitious roots

Delphine Chinchilla , Florian Frugier , Marcela Raíces , Francisco Merchan , Verónica Giammaria et al.
Functional Plant Biology, 2008, 35 (1), ⟨10.1071/FP07209⟩
Article dans une revue hal-01912705 v1

Cytokinin: secret agent of symbiosis.

Florian Frugier , Sonja Kosuta , Jeremy D Murray , Martin Crespi , Krzysztof Szczyglowski
Trends in Plant Science, 2008, 13 (3), pp.115-20. ⟨10.1016/j.tplants.2008.01.003⟩
Article dans une revue istex hal-00856256 v1

MicroRNA166 controls root and nodule development in Medicago truncatula.

Adnane Boualem , Philippe Laporte , Mariana Jovanovic , Carole Laffont , Julie Plet et al.
The Plant Journal, 2008, 54 (5), pp.876-87. ⟨10.1111/j.1365-313X.2008.03448.x⟩
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Differential expression of the TFIIIA regulatory pathway in response to salt stress between Medicago truncatula genotypes.

Laura de Lorenzo , Francisco Merchan , Sandrine Blanchet , Manuel Megías , Florian Frugier et al.
Plant Physiology, 2007, 145 (4), pp.1521-32. ⟨10.1104/pp.107.106146⟩
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Identification of regulatory pathways involved in the reacquisition of root growth after salt stress in Medicago truncatula.

Francisco Merchan , Laura De Lorenzo , Silvina González Rizzo , Andreas Niebel , Hamid Manyani et al.
The Plant Journal, 2007, 51 (1), pp.1-17. ⟨10.1111/j.1365-313X.2007.03117.x⟩
Article dans une revue hal-00159200 v1

Riboregulators in plant development.

P. Laporte , F. Merchan , B. B. Amor , S. Wirth , M. Crespi
Biochemical Society Transactions, 2007, 35 (Pt 6), pp.1638-42. ⟨10.1042/BST0351638⟩
Article dans une revue hal-00856264 v1

Characterization of 43 Non-Protein-Coding mRNA Genes in Arabidopsis, Including the MIR162a -Derived Transcripts

Judith Hirsch , Vincent Lefort , Marion Vankersschaver , Adnane Boualem , Antoine Lucas et al.
Plant Physiology, 2006, 140 (4), pp.1192-1204. ⟨10.1104/pp.105.073817⟩
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A CDPK isoform participates in the regulation of nodule number in Medicago truncatula

Pablo Gargantini , Silvina Gonzalez-Rizzo , Delphine Chinchilla , Marcela Raíces , Verónica Giammaria et al.
The Plant Journal, 2006, 48 (6), pp.843 - 856. ⟨10.1111/j.1365-313X.2006.02910.x⟩
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Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts

Judith Hirsch , Vincent Lefort , Marion Vankersschaver , Adnane Boualem , Antoine Lucas et al.
Plant Physiology, 2006, 140 (4), pp.1192-1204. ⟨10.1104/pp.105.073817⟩
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The Medicago truncatula CRE1 Cytokinin Receptor Regulates Lateral Root Development and Early Symbiotic Interaction with Sinorhizobium meliloti

S. Gonzalez-Rizzo , M. Crespi , F. Frugier
The Plant cell, 2006, 18 (10), pp.2680 - 2693. ⟨10.1105/tpc.106.043778⟩
Article dans une revue hal-01912666 v1

Cross-talk between ethylene and drought signalling pathways is mediated by the sunflower Hahb-4 transcription factor.

Pablo A Manavella , Agustín L Arce , Carlos A Dezar , Frédérique Bitton , Jean-Pierre Renou et al.
The Plant Journal, 2006, 48 (1), pp.125-137. ⟨10.1111/j.1365-313X.2006.02865.x⟩
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MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula.

Jean-Philippe Combier , Florian Frugier , Françoise de Billy , Adnane Boualem , Fikri El-Yahyaoui et al.
Genes and Development, 2006, 20 (22), pp.3084-8. ⟨10.1101/gad.402806⟩
Article dans une revue hal-00121505 v1

The Medicago truncatula CRE1 cytokinin receptor regulates lateral root development and early symbiotic interaction with Sinorhizobium meliloti.

Silvina Gonzalez-Rizzo , Martin Crespi , Florian Frugier
The Plant cell, 2006, 18 (10), pp.2680-93. ⟨10.1105/tpc.106.043778⟩
Article dans une revue hal-00123705 v1

GuaB Activity Is Required in Rhizobium tropici During the Early Stages of Nodulation of Determinate Nodules but Is Dispensable for the Sinorhizobium meliloti–Alfalfa Symbiotic Interaction.

Mónica Collavino , Pablo M. Riccillo , Daniel H. Grasso , Martín Crespi , O. Mario Aguilar
Molecular Plant-Microbe Interactions, 2005, 18, pp.742-750. ⟨10.1094/MPMI-18-0742⟩
Article dans une revue hal-00019588 v1

Enod40, a short open reading frame-containing mRNA, induces cytoplasmic localization of a nuclear RNA binding protein in Medicago truncatula.

Anna Campalans , Adam Kondorosi , Martin Crespi
The Plant cell, 2004, 16 (4), pp.1047-59. ⟨10.1105/tpc.019406⟩
Article dans une revue hal-00122324 v1

Role of plasmodesmata regulation in plant development

Arnaud Complainville , Martin Crespi
Advances in Botanical Research, 2004, 41, pp.195-243. ⟨10.1016/S0065-2296(04)41005-2⟩
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Phytohormonal responses in enod40-overexpressing plants of Medicago truncatula and rice.

Moul Dey , Arnaud Complainville , Celine Charon , Lina Torrizo , Adam Kondorosi et al.
Physiologia Plantarum, 2004, 120 (1), pp.132-139. ⟨10.1111/j.0031-9317.2004.0208.x⟩
Article dans une revue istex hal-00122910 v1

Nodule initiation involves the creation of a new symplasmic field in specific root cells of medicago species.

Arnaud Complainville , Lysiane Brocard , Ian Roberts , Edna Dax , Noa Sever et al.
The Plant cell, 2003, 15 (12), pp.2778-91. ⟨10.1105/tpc.017020⟩
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StCDPK1 is expressed in potato stolon tips and is induced by high sucrose concentration.

Marcela Raíces , Rita M Ulloa , Gustavo C Macintosh , Martín Crespi , María T Téllez-Iñón
J Exp Bot, 2003, 54 (392), pp.2589-91. ⟨10.1093/jxb/erg282⟩
Article dans une revue hal-00122891 v1

Ankyrin protein kinases: A novel type of plant kinase genes whose expression is induced byosmotic stress in alfalfa

Delphine Chinchilla , Francisco Merchan , Manuel Megias , Adam Kondorosi , Carolina Sousa et al.
Plant Molecular Biology, 2003, 51 (4), pp.555-566. ⟨10.1023/A:1022337221225⟩
Article dans une revue istex hal-00134566 v1

Characterisation of plant genes involved in giant cells formation induced by root-knot nematodes in Arabidopsis thaliana and Medicago truncatula

Bruno Favery , F. Jammes , Philippe Lecomte , A. Complainville , J.M. Vinardell et al.
Nematology Monographs and Perspectives, 2003, 2 (1-8), pp.1-8
Article dans une revue hal-02677542 v1
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The endosymbiosis-induced genes ENOD40 and CCS52a are involved in endoparasitic-nematode interactions in Medicago truncatula

Bruno Favery , A. Complainville , J.M. Vinardell , Philippe Lecomte , D. Vaubert et al.
Molecular Plant-Microbe Interactions, 2002, 15 (10), pp.1008-1013. ⟨10.1094/MPMI.2002.15.10.1008⟩
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The endosymbiosis-induced genes ENOD40 and CCS52a are involved in endoparasitic-nematode interactions in Medicago truncatula.

Bruno Favery , Arnaud Complainville , Jose Maria Vinardell , Philippe Lecomte , Danièle Vaubert et al.
Molecular Plant-Microbe Interactions, 2002, 15 (10), pp.1008-13
Article dans une revue hal-00139391 v1

Medicago truncatula plants overexpressing the early nodulin gene enod40 exhibit accelerated mycorrhizal colonization and enhanced formation of arbuscules

Christian Staehelin , Celine Charon , Thomas Boller , Martin Crespi , Ádám Kondorosi
Proceedings of the National Academy of Sciences of the United States of America, 2001, 98, pp.15366-15371
Article dans une revue hal-00157258 v1

Translational and Structural Requirements of the Early Nodulin Gene enod40, a Short-Open Reading Frame-Containing RNA, for Elicitation of a Cell-Specific Growth Response in the Alfalfa Root Cortex

Carolina Sousa , Christina Johansson , Celine Charon , Hamid Manyani , Christof Sautter et al.
Molecular and Cellular Biology, 2001, 21, pp.354-366. ⟨10.1128/MCB.21.1.354-366.2001⟩
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Oxygen regulation of a nodule-located carbonic anhydrase in alfalfa.

S. Gálvez , A. M. Hirsch , K. L. Wycoff , S. Hunt , D. B. Layzell et al.
Plant Physiology, 2000, 124 (3), pp.1059-68
Article dans une revue hal-00162981 v1

A Krüppel-like zinc finger protein is involved in nitrogen-fixing root nodule organogenesis.

F. Frugier , S. Poirier , B. Satiat-Jeunemaître , A. Kondorosi , M. Crespi
Genes and Development, 2000, 14 (4), pp.475-82
Article dans une revue hal-00162969 v1

Temporal and spatial order of events during the induction of cortical cell divisions in white clover by Rhizobium leguminosarum bv. trifolii inoculation or localized cytokinin addition.

U. Mathesius , C. Charon , B. G. Rolfe , A. Kondorosi , M. Crespi
Molecular Plant-Microbe Interactions, 2000, 13 (6), pp.617-28
Article dans une revue hal-00164169 v1

Long ncRNAs and epigenetic regulations are attractive candidate elements for the orchestration of symbiotic gene expression in M. truncatula.

Yann Pecrix , S Evan Staton , Erika Sallet , Christine Lelandais Briere , Sandra Moreau et al.
International plant epigenetics symposium, ERC (European Research Council) and the RFI Objectif Végétal regional programme, Oct 2018, Angers, France
Communication dans un congrès hal-03355269 v1
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Small RNA profiles in soybean primary root tips under water deficit

Yun Zheng , Vandana Hivrale , Xiaotuo Zhang , Babu Valliyodan , Christine Lelandais-Briere et al.
15. International Conference On Bioinformatics (InCoB) - Systems biology, Sep 2016, Queenstown, Singapore. pp.10, ⟨10.1186/s12918-016-0374-0⟩
Communication dans un congrès hal-01601655 v1

High throughput sequencing identifies stage-specific miRNA populations in developing Medicago truncatula seeds

Karine Gallardo Guerrero , Gregoire G. Aubert , Christine Lelandais - Brière , Jerome Gouzy , Erika Sallet et al.
Graine 2011, 3. colloque national du Réseau Français de Biologie des Graines, Oct 2011, Nantes, France
Communication dans un congrès hal-02748933 v1

Real-time RT-PCR Profiling of Over1400 Medicago truncatula transcription factors during seed filling

Jérôme Verdier , Clementina Kakar , Karine Gallardo , Christine Le Signor , Gregoire G. Aubert et al.
3. International Conference on Legume Genomics and Genetics, Apr 2006, Brisbane, Australia
Communication dans un congrès hal-02752651 v1

Analyse des profils d'expression de plus de 1000 facteurs de transcription au cours du remplissage de la graine chez M. truncaltula par PCR quantitative en temps réel

Jérôme Verdier , Clementina Kakar , Karine Gallardo , Christine Le Signor , Gregoire G. Aubert et al.
12. Forum des jeunes chercheurs, Jun 2006, Besançon, France
Communication dans un congrès hal-02750691 v1

Real-time RT-PCR profiling of all annotated Medicago truncatula transcription factors during seed filling

Jérôme Verdier , Karine Gallardo , Christine Le Signor , Samia Djennane , Gregoire G. Aubert et al.
Model Legume Congress 2005, Jun 2005, Asilomar, United States
Communication dans un congrès hal-02762487 v1

Characterisation of plant genes involved in giant cells formation induced by root-knot nematodes in Arabidopsis thaliana and Medicago truncatula

Bruno Favery , Fabien Jammes , Philippe Lecomte , Arnaud Complainville , José Maria Vinardell et al.
4. International Nematology Congress, Jun 2002, Tenerife, Spain
Communication dans un congrès hal-02760113 v1
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Plant genes involved in giant cells formation induced by root-knot nematodes in Arabidopsis and Medicago

Bruno Favery , Fabien Jammes , Liudmila L. Chelysheva , Philippe Lecomte , Arnaud Complainville et al.
11. International Congress, Jul 2003, Saint-Petersbourg, Russia
Communication dans un congrès hal-02761636 v1
Image document

Les apports de la génomique à l'agroécologie

Isabelle Hippolyte , Emmanuel Guiderdoni , Jannatul Mia , Bernard Hubert , Martin Crespi et al.
Isabelle Hippolyte, Emmanuel Guiderdoni, Jannatul Mia, Bernard Hubert. 12, 70 p., 2020, Les Cahiers de l'ANR
Ouvrages hal-02940745 v1

Root Development in Medicago truncatula: Lessons from Genetics to Functional Genomics

Hélène Proust , Caroline Hartmann , Martin Crespi , Christine Lelandais-Brière
Methods in Molecular Biology, 1822, Humana Press Inc., pp.205-239, 2018, Methods in Molecular Biology, 978-1-4939-8633-0; 978-1-4939-8632-3. ⟨10.1007/978-1-4939-8633-0_15⟩
Chapitre d'ouvrage hal-02383696 v1

CircRNAs in Plants

Xuelei Lai , Jérémie Bazin , Stuart Webb , Martin Crespi , Chloe Zubieta et al.
J. Xiao. Circular RNAs. Series: Advances in Experimental Medicine and Biology, 1087, Springer, pp.329-343, 2018, Advances in Experimental Medicine and Biology, 978-981-13-1426-1; 978-981-13-1425-4. ⟨10.1007/978-981-13-1426-1_26⟩
Chapitre d'ouvrage hal-02193011 v1

Stable Inactivation of MicroRNAs in Medicago truncatula Roots

Hélène Proust , Jérémie Bazin , Céline Sorin , Caroline Hartmann , Martin Crespi et al.
Methods in Molecular Biology, 1822, Humana Press Inc., pp.123-132, 2018, Methods in Molecular Biology, 978-1-4939-8633-0; 978-1-4939-8632-3. ⟨10.1007/978-1-4939-8633-0_9⟩
Chapitre d'ouvrage hal-02383697 v1

Plant epigenetics: Non-coding RNAs as emerging regulators

Juan Sebastian Ramirez Prado , Federico Ariel , Moussa Benhamed , Martin Crespi
Plant Epigenetics, Springer International Publishing, 536 p., 2017, RNA Technologies, 978-3-319-55519-5 978-3-319-55520-1. ⟨10.1007/978-3-319-55520-1_7⟩
Chapitre d'ouvrage hal-02788580 v1

Immunolocalization

B. Hause , F. Frugier , M. Crespi
Medicago truncatula handbook, The Samuel Roberts Noble Foundation, Inc., pp.1-11, 2007
Chapitre d'ouvrage hal-00178263 v1

Response of Medicago truncatula to Salt stress

F. Merchan , M. Crespi , F. Frugier
Medicago truncatula handbook, The Samuel Roberts Noble Foundation, Inc., pp.13-16, 2007
Chapitre d'ouvrage hal-00178267 v1

Functional analysis of regulatory genes involved in M. truncatula nodule organogenesis.

M. Crespi , A; Complainville , D. Chinchilla , F. Merchan , A. Campalans et al.
T. Finan, M. R. O'Brian, D. B. Layzell, J. K. Vessey. Nitrogen Fixation: Global Perspectives, C.A.B. I. Publishing, pp.179-183, 2002
Chapitre d'ouvrage hal-00147549 v1

Control of root nodule organogenesis

A. Kondorosi , C. Charon , A. Cebolla , J.M. Vinardell , F. Frugier et al.
Biology of Plant-Microbe Interactions, IS-MPMI International Society for Molecular Plant-Microbe Interactions, pp.158-163, 2002
Chapitre d'ouvrage hal-00147561 v1

Cell cycle control in root nodule organogenesis

A. Kondorosi , A. Cebolla , C. Charon , F. Foucher , J. Gyorgyey et al.
F. O. Pedrosa M. Hungria G. Yates W. E. Newton. Nitrogen Fixation: From Molecules to Crop Productivity, Kluwer Academic Publishers, pp.223-226, 2000, CURRENT PLANT SCIENCE AND BIOTECHNOLOGY IN AGRICULTURE Volume 38
Chapitre d'ouvrage hal-00165966 v1

The Arabidopsis RNA-binding protein SGS3 is recruited to the chromatin remodeler CHR11 to promote siRNA production from protein-coding genes

Taline Elmayan , Thomas Blein , Emilie Elvira-Matelot , Ivan Le Masson , Aurélie Christ et al.
2024
Pré-publication, Document de travail hal-04729123 v1

Sequence-unrelated long noncoding RNAs converged to modulate the activity of conserved epigenetic machineries across kingdoms

Camille Fonouni-Farde , Aurélie Christ , Thomas Blein , Juan Sebastián Ramírez-Prado , María Florencia Legascue et al.
2021
Pré-publication, Document de travail hal-03432759 v1
Image document

The lncRNA MARS modulates the epigenetic reprogramming of the marneral cluster in response to ABA

Thomas Roulé , Federico Ariel , Caroline Hartmann , Jose Gutierrez-Marcos , Nosheen Hussain et al.
2020
Pré-publication, Document de travail hal-03016338 v1
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ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

Nicolás Gaggion , Federico Ariel , Vladimir Daric , Eric Lambert , Simon Legendre et al.
2020
Pré-publication, Document de travail hal-03016324 v1
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Identification and functional prediction of anthocyanin biosynthesis regulatory long non-coding RNAs (lncRNAs) in carrot

Constanza Chialva , Thomas Blein , Martin Crespi , Diego Lijavetzky
2020
Pré-publication, Document de travail hal-03016329 v1

Two ecotype-related long non-coding RNAs in the environmental control of root growth

Thomas Blein , Coline Balzergue , Thomas Roulé , Marc Gabriel , Laetitia Scalisi et al.
2019
Pré-publication, Document de travail hal-02399291 v1
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Genome sequence of the cluster root forming white lupin;

Barbara Hufnagel , André Marques , Alexandre Soriano , Laurence Marquès , Fanchon Divol et al.
2019
Pré-publication, Document de travail (preprint/prepublication) hal-02790529 v1

Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis

Jérémie Bazin , Kiruthiga Mariappan , Thomas Blein , Ronny Voelz , Martin Crespi et al.
2019
Pré-publication, Document de travail hal-02399302 v1