
Michael Alaux
78
Documents
Identifiants chercheurs
Site web
Publications
Publications
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IWGSC data repository news and overview of the plans for the WheatISPAG XXX - Plant and Animal Genome Conference, Jan 2023, San Diego, United States
Communication dans un congrès
hal-04537219
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WheatIS EWG annual meeting 2023PAG XXX - Plant and Animal Genome Conference, Jan 2023, San Diego, United States
Communication dans un congrès
hal-04536690
v1
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Feedback from the wheat community: the case of the WheatISGrapedia kickoff meeting, Nov 2022, Online, Spain
Communication dans un congrès
hal-04536615
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WheatIS EWG updatesWheat Initiative Jamboree, Oct 2022, Carlow, Ireland
Communication dans un congrès
hal-04536643
v1
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Developing infrastructures for FAIR data in plant biologyGatersleben Research Conference - Applied Bioinformatics for crops (GRC2019), IPK, Mar 2019, Gatersleben, Germany
Communication dans un congrès
hal-03316569
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Linking the International Wheat Genome Sequencing Consortium Bread Wheat Reference Genome Sequence to Wheat Genetic and Phenomic DataPAG XXVII - Plant and Animal Genome Conference, Jan 2019, San Diego, United States
Communication dans un congrès
hal-04536576
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Updates on the WheatIS toolsPAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States
Communication dans un congrès
hal-04536526
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Developing grapevine FAIR DataPAG Conference 2018, Jan 2018, San Diego, United States
Communication dans un congrès
hal-02738117
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Improving the « FAIRness » of Inra’s data for plant biology and breedingPAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.14 slides
Communication dans un congrès
hal-02790227
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WheatIS data discoveryPAG XXVII - Plant and Animal Genome Conference, Jan 2019, San Diego, United States
Communication dans un congrès
hal-04536596
v1
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BreedWheat GWAS data in GnpIS information systemEucarpia Cereal Section - Breeding cereals for sustainable agriculture, Mar 2018, Clermont-Ferrand, France
Communication dans un congrès
hal-02340450
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The IWGSC Data repository and wheat data resources hosted at URGI: Overview and perspectivesPAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.32 slides
Communication dans un congrès
hal-02788401
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Findable, Accessible, Interoperable and Reusable data linked to genetic resources for plant biology and breeding at INRA4. International Symposium on Genomics of Plant Genetic Resources, Sep 2017, Giessen, Germany. pp.17 slides
Communication dans un congrès
hal-02791168
v1
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The IWGSC Reference genome browser, data mining and beyondPAG XXV - Plant and Animal Genome Conference, Jan 2017, San Diego, United States
Communication dans un congrès
hal-02788141
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Making wheat data FAIRe-ROSA Workshop, Wageningen University and Research Centre (WUR). NLD., Jul 2017, Montpellier, France
Communication dans un congrès
hal-02787766
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Contribution to a European roadmap for data standardisation in Plant Science at URGI-INRAPlant Biology Europe EPSO / FESBP 2016 Congress, Jun 2016, Prague, Czech Republic
Communication dans un congrès
hal-02794139
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Sequencing and Analysis of Wheat Chromosome 1BPlant and Animal Genome XXIV Conference; IWGSC Standards and Protocoles Workshop, Jan 2016, San Diego, CA, United States
Communication dans un congrès
hal-02306172
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IWGSC Sequence Repository: Moving towards tools to facilitate data integration for the reference sequence of wheatPAG XXIV - Plant and Animal Genome Conference, Jan 2016, San Diego, United States
Communication dans un congrès
hal-01266518
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Phenotypic Data Exchange and Processing Using ISA-Tab Standard: transPLANT Project Use Case with GnpIS.Ephesis and Bii23. Plant and Animal Genome (PAG), Jan 2015, San Diego, United States
Communication dans un congrès
hal-02739236
v1
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Grape@GnpIS: Overview of the GnpIS grape genomics and genetics integrative resource23. Plant and Animal Genome (PAG XXIII), Jan 2015, San Diego, Californie, United States. pp.24 slides
Communication dans un congrès
hal-02741780
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IWGSC sequence repository : how to facilitate pseudomolecule assembly?PAG XXIII - Plant and Animal Genome Conference, Jan 2015, San Diego, United States
Communication dans un congrès
hal-02741662
v1
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A reference sequence of wheat chromosome 3B3. Plant Genomics Congress, May 2015, London, United Kingdom
Communication dans un congrès
hal-02740971
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A reference sequence of wheat chromosome 3B22. Conference on Plant and Animal Genome, Jan 2014, San Diego, United States
Communication dans un congrès
hal-02742303
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IWGSC Sequence repository at URGI: New features and blast toolPAG XXII - Plant and Animal Genome, Jan 2014, San Diego, United States
Communication dans un congrès
hal-02801480
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URGI plant and fungi platform: distributed resources through GMOD toolsPlant and Animal Genome conference XXII, GMOD session, Jan 2014, San Diego (CA), United States
Communication dans un congrès
hal-02796293
v1
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Plant biology open data interoperability in the big data eraPlant Biology Europe EPSO/FEPBS 2014, Jun 2014, Dublin, Germany
Communication dans un congrès
hal-02801067
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Information system for phenotype data: trait, trials and genotypes identification and integration22. Conference Plant and Animal Genome, European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI). GBR., Jan 2014, San Diego, United States
Communication dans un congrès
hal-02795958
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IWGSC Sequence repository : Blast your favorite gene against the wheat survey sequencePAG XXI - Plant and Animal Genome, Jan 2013, San Diego, United States
Communication dans un congrès
hal-02804578
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IWGSC Sequence repository : new data and browsers12. IWGS (International Wheat Genetics Symposium), Kyoto University [Kyoto] (KU). JPN., Sep 2013, Yokohama, Japan
Communication dans un congrès
hal-02806070
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Sequencing and Assembling a Reference Sequence of the 1 Gb Wheat Chromosome 3BIWGSC Wheat Genome Sequencing Strategy and Funding Workshop, International Wheat Genome Sequencing Consortium (IWGSC). USA., Apr 2013, Evry, France
Communication dans un congrès
hal-02747374
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A strategy to assemble a reference sequence of the 1 Gb wheat chromosome 3BTGAC/ESF-LESC workshop, Strategies for de novo assemblies of complex crop genomes, Genome Analysis Centre (TGAC). Norwich, GBR., Oct 2012, Norwich, United Kingdom
Communication dans un congrès
hal-02809032
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Towards a reference sequence of the 1 Gb wheat chromosome 3B16. Annual Advances in Genome Biology and Technology (AGBT), Feb 2012, Marco Island, Floride, United States
Communication dans un congrès
hal-02807639
v1
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URGI genome annotation system:an integrated system for structural and functional genome annotation12. Edition du colloque JOBIM : Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2011, Paris, France. 2 p
Communication dans un congrès
hal-01019754
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Sequencing and analyses of the hexaploid wheat chromosome 3B10. conference on Genome Informatics, Sep 2010, Hinxton, United Kingdom
Communication dans un congrès
hal-02753841
v1
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GnpAnnot community annotation system: features, qualifiers, values3. International Biocuration Conference, Apr 2009, Berlin, Germany
Communication dans un congrès
hal-02758372
v1
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IWGSC 2.0: Implementing the Wheat Diversity ProjectPAG 2024 Australia, Sep 2024, Perth, Australia
Poster de conférence
hal-04913949
v1
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Data FAIRification in a cross-institutional governance framework : recommendations from the ANR-BRIDGE projectRDA 19th Plenary meeting, part of International Data Week, Jun 2022, Seoul, South Korea. , 2022, ⟨10.5281/zenodo.6652404⟩
Poster de conférence
hal-03758083
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D2KAB project taking off: Data to Knowledge in Agronomy and Biodiversity14th Research Data Alliance Plenary Conference (RDA P14), Best poster award, Oct 2019, Helsinki, Finland. , 2019, ⟨10.5281/zenodo.3520300⟩
Poster de conférence
lirmm-02351000
v1
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Findable, Accessible, Interoperable and Reusable data linked to genetic resources for plant biology and breeding at INRACrop diversification in a changing world : Mobilizing the green gold of plant genetic resources, May 2017, Montpellier, France. , 2017, EUCARPIA Genetic Resources 2017
Poster de conférence
hal-01606277
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BreedWheat genotyping and phenotyping data in GnpIS information systemJOBIM 2015 - Journées Ouvertes Biologie Informatique Mathématiques, Jul 2015, Clermont-Ferrand, France. 2015
Poster de conférence
hal-02801654
v1
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Wheat Crop Ontology: A Species Specific Trait Ontology. Use Case: The URGI Information SystemPlant and Animal Genome, Jan 2013, San Diego, United States. 2013
Poster de conférence
hal-02810186
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Wheat Data Integration and FAIRification: IWGSC, GrainGenes, Ensembl and Other Data RepositoriesThe Wheat Genome, Springer International Publishing, pp.13-25, In press, Compendium of Plant Genomes, ⟨10.1007/978-3-031-38294-9_2⟩
Chapitre d'ouvrage
hal-04316553
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Mining plant genomic and genetic data using the GnpIS information systemAalt D.J van Dijk. Plant Genomics Databases. Methods and Protocols, 1533, Springer, 2017, Methods in Molecular Biology, 978-1-4939-6658-5. ⟨10.1007/978-1-4939-6658-5_5⟩
Chapitre d'ouvrage
hal-03206731
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The Wheat Black Jack : advances towards sequencing the 21 chromosomes of the bread wheat genomeGenomics of Plant Genetic Resources, Editions Springer, 704 p., 2014, 978-94-007-7571-8. ⟨10.1007/978-94-007-7572-5_17⟩
Chapitre d'ouvrage
hal-02797297
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Ontology mapping for wheat trait information managementSéminaire résidentiel INRAE Semantic Linked Data, 2023
Autre publication scientifique
hal-04420465
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AGENT Guidelines for dataflow2025
Pré-publication, Document de travail
hal-04822902
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URGI Plant Bioinformatics Facility (PlantBioinfoPF) data management planINRAE. 2024
Rapport
(plan de gestion de données/data management plan)
hal-04646807
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RDF Query interface from BrAPI web service sourceINRAE. 2017, https://rd-alliance.org/sites/default/files/attachment/Creation%20of%20a%20Query%20interface%20for%20phenotyping%20data%20Final%20Report.pdf
Rapport
hal-04505409
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Rapport de synthèse du chantier DOI[0] 2014, 47 p
Rapport
hal-02801364
v1
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