ms

michel salzet

Professor, Lab Director
201
Documents
Affiliations actuelles
  • Université de Lille
  • Protéomique, Réponse Inflammatoire, Spectrométrie de Masse (PRISM) - U 1192 (PRISM)
Identifiants chercheurs
Contact

Compétences

neuroimmunology immunology proteomics oncoimmunology

Publications

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Publications

Nonclassical HLA and pseudogenes in maternal–fetal tolerance and cancer

Marie Duhamel , Tristan Cardon , Lydia Ziane-Chaouche , Michel Salzet

Trends in Immunology, 2025, ⟨10.1016/j.it.2025.08.006⟩

Article dans une revue hal-05400718v1
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Self or nonself: end of a dogma?

Marie Duhamel , Michel Salzet

Frontiers in Immunology, 2025, Frontiers in Immunology, 16, pp.1595764. ⟨10.3389/fimmu.2025.1595764⟩

Article dans une revue (article de synthèse) hal-05152236v1
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Systematic identification of lincRNA-derived immunogenic peptides in melanoma

Emilie Dupré , Amélie Guiho , Tiffany Beauvais , Léna Labous , Tristan Cardon et al.

OncoImmunology, 2025, 14 (1), pp.2538684. ⟨10.1080/2162402X.2025.2538684⟩

Article dans une revue inserm-05198538v1

Mice lacking the fructose transporter Glut5 exhibit excessive androgens and reduced sperm motility

Aikaterini Kallianioti , Guillaume Bourdon , Jeremy Grandhaye , Claire Chevaleyre , Soulaimane Aboulouard et al.

Endocrinology, 2025, 166 (3), pp.bqaf005. ⟨10.1210/endocr/bqaf005⟩

Article dans une revue hal-05019388v1
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Unraveling the protein kinase C/NDRG1 signaling network in breast cancer.

C. Saponaro , M. Damato , E. Stanca , Soulaimane Aboulouard , F. A. Zito et al.

Cell & Bioscience, 2025, Cell & Bioscience, 14, pp.156. ⟨10.1186/s13578-024-01336-z⟩

Article dans une revue hal-05118547v1

In Vivo Identification and Spatial Distribution of Crown Gall Disease Biomarkers in Grapevine

Trong Nguyen-Huu , Nina Ogrinc , Léa Ledoux , Cédric Jacquard , Isabelle Kerzaon et al.

Analytical Chemistry, 2025, 97 (30), pp.16364-16373. ⟨10.1021/acs.analchem.5c02019⟩

Article dans une revue hal-05393380v1

Sex-dependent effects of maternal high-fat diet during lactation in the offspring of adult THY-Tau22 mice.

Thibaut Gauvrit , Hamza Benderradji , A. Pelletier , Kevin Carvalho , Soulaimane Aboulouard et al.

Brain : a journal of neurology, 2025, Brain, pp.awaf417. ⟨10.1093/brain/awaf417⟩

Article dans une revue hal-05383267v1
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Long-term outcome of oesophageal atresia in adolescence (TransEAsome): a national French cohort study protocol

Mélanie Leroy , Madeleine Aumar , Marie Duhamel , Luc Dauchet , Martin Figeac et al.

BMJ Open, 2025, BMJ Open, 15 (1), pp.e086303. ⟨10.1136/bmjopen-2024-086303⟩

Article dans une revue hal-04887829v1

Profiler: an open web platform for multi-omics analysis

Yanis Zirem , Léa Ledoux , Isabelle Fournier , Michel Salzet

Bioinformatics, 2025, ⟨10.1093/bioinformatics/btaf644⟩

Article dans une revue hal-05393378v1
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Exploring the role of readthrough-inducing molecule 2,6-diaminopurine to increase immune response against cancer cells

Carmen Sandoval Pacheco , Alice M Leroy , Mehdi Derhourhi , Tristan Cardon , Catherine Leroy et al.

Molecular Therapy, 2025, 33 (12), pp.6212-6225. ⟨10.1016/j.ymthe.2025.09.024⟩

Article dans une revue hal-05287757v1

Innate immune cells in chimeric antigen receptor therapy

Marius Jassaud , Lydia Ziane-Chaouche , Marie Duhamel , Michel Salzet

Molecular Therapy, 2025, ⟨10.1016/j.ymthe.2025.10.003⟩

Article dans une revue hal-05400715v1

Real-time glioblastoma tumor microenvironment assessment by SpiderMass for improved patient management.

Yanis Zirem , Léa Ledoux , Lucas Roussel , Claude Alain Maurage , Pierre Tirilly et al.

Cell Reports Medicine, 2024, pp.101482. ⟨10.1016/j.xcrm.2024.101482⟩

Article dans une revue hal-04527077v1
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Deciphering the ghost proteome in ovarian cancer cells by deep proteogenomic characterization.

Diego Fernando Garcia del Rio , Mehdi Derhourhi , Amelie Bonnefond , S. Leblanc , N. Guilloy et al.

Cell Death and Disease, 2024, Cell Death and Disease, 15, pp.712. ⟨10.1038/s41419-024-07046-1⟩

Article dans une revue hal-05118493v1

The impact and future of artificial intelligence in medical genetics and molecular medicine: an ongoing revolution

Firat Ozcelik , Mehmet Sait Dundar , A. Baki Yildirim , Gary Henehan , Oscar Vicente et al.

Functional and Integrative Genomics, 2024, Functional and Integrative Genomics, 24, pp.138. ⟨10.1007/s10142-024-01417-9⟩

Article dans une revue (article de synthèse) hal-04712663v1

Human ovarian extracellular vesicles proteome from polycystic ovary syndrome patients associate with follicular development alterations

Noemie Couty , Anthony Estienne , Soazig Le Lay , Christelle Rame , Claire Chevaleyre et al.

FASEB Journal, 2024, 38 (20), pp.e70113. ⟨10.1096/fj.202400521RR⟩

Article dans une revue hal-04766365v1
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Heterogeneity Assessment and Protein Pathway Prediction via Spatial Lipidomic and Proteomic Correlation: Advancing Dry Proteomics concept for Human Glioblastoma Prognosis.

Laurine Lagache , Yanis Zirem , Emilie Le Rhun , Isabelle Fournier , Michel Salzet

Molecular and Cellular Proteomics, 2024, Molecular and Cellular Proteomics, 24 (1), pp.100891. ⟨10.1016/j.mcpro.2024.100891⟩

Article dans une revue hal-04918138v1
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Protocol for generating a co-culture of macrophages with breast cancer tumoroids.

Antonella Raffo Romero , Lydia Ziane Chaouche , Nawale Hajjaji , Michel Salzet , Marie Duhamel

STAR Protocols, 2024, STAR Protocols, 6 (1), pp.103536. ⟨10.1016/j.xpro.2024.103536⟩

Article dans une revue hal-04918128v1
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A co-culture system of macrophages with breast cancer tumoroids to study cell interactions and therapeutic responses

Antonella Raffo Romero , Lydia Ziane Chaouche , Sophie Salome , Nawale Hajjaji , Isabelle Fournier et al.

Cell Reports Methods, 2024, Cell Reports Methods, 4 (6), pp.100792. ⟨10.1016/j.crmeth.2024.100792⟩

Article dans une revue hal-04718878v1
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Inhibition of furin in CAR macrophages directs them toward a proinflammatory phenotype and enhances their antitumor activities.

Lydia Ziane Chaouche , Antonella Raffo Romero , Nawale Hajjaji , Firas Kobeissy , Donna Pinheiro et al.

Cell Death and Disease, 2024, Cell Death and Disease, 15, pp.879. ⟨10.1038/s41419-024-07267-4⟩

Article dans une revue hal-04918175v1

In Vivo and Real-Time Metabolic Profiling of Plant-Microbe Interactions in Leaves, Stems, and Roots of Bacterially Inoculated Chardonnay Plantlets using SpiderMass

Nina Ogrinc , Essaïd Ait Barka , Christophe Clément , Michel Salzet , Lisa Sanchez et al.

Analytical Chemistry, 2024, Analytical Chemistry, 96 (34), pp.13821-13829. ⟨10.1021/acs.analchem.4c01470⟩

Article dans une revue hal-04718924v1
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Protocol to analyze 1D and 2D mass spectrometry data from glioblastoma tissues for cancer diagnosis and immune cell identification

Yanis Zirem , Léa Ledoux , Michel Salzet , Isabelle Fournier

STAR Protocols, 2024, 5 (3), pp.103285. ⟨10.1016/j.xpro.2024.103285⟩

Article dans une revue hal-04696588v1
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The colibactin-producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance

Nilmara de Oliveira Alves , Guillaume Dalmasso , Darja Nikitina , Amaury Vaysse , Richard Ruez et al.

Gut microbes, 2024, 16 (1), pp.2320291. ⟨10.1080/19490976.2024.2320291⟩

Article dans une revue hal-04542255v1

Development of a novel apigenin prodrug programmed for alkaline-phosphatase instructed self-inhibition to combat cancer.

D. Diamantis , A. D. Tsiailanis , C. Papaemmanouil , M. C. Nika , Z. Kanaki et al.

Journal of Biomolecular Structure and Dynamics, 2023, Journal of Biomolecular Structure and Dynamics, pp.1-22. ⟨10.1080/07391102.2023.2247083⟩

Article dans une revue hal-04400762v1
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Establishment and characterization of canine mammary tumoroids for translational research.

Antonella Raffo Romero , Soulaimane Aboulouard , Emmanuel Bouchaert , Agata Rybicka , Dominique Tierny et al.

BMC Biology, 2023, BMC Biology, 21, pp.23. ⟨10.1186/s12915-023-01516-2⟩

Article dans une revue hal-04401119v1

Astrocytes express aberrant immunoglobulins as putative gatekeeper of astrocytes to neuronal progenitor conversion

Alice Capuz , Sylvain Osien , Mélodie Anne Karnoub , Soulaimane Aboulouard , Estelle Laurent et al.

Cell Death and Disease, 2023, 14 (4), pp.237. ⟨10.1038/s41419-023-05737-9⟩

Article dans une revue hal-04528695v1
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Multi-Omics Data Integration Reveals Sex-Dependent Hippocampal Programming by Maternal High-Fat Diet during Lactation in Adult Mouse Offspring

Thibaut Gauvrit , Hamza Benderradji , Alexandre Pelletier , Soulaimane Aboulouard , Emilie Faivre et al.

Nutrients, 2023, 15 (21), pp.4691. ⟨10.3390/nu15214691⟩

Article dans une revue hal-04398934v1
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Employing non-targeted interactomics approach and subcellular fractionation to increase our understanding of the ghost proteome

Diego-Fernando Garcia del Rio , Tristan Cardon , S. Eyckerman , Isabelle Fournier , Amelie Bonnefond et al.

iScience, 2023, Iscience, 26, pp.105943. ⟨10.1016/j.isci.2023.105943⟩

Article dans une revue hal-04401042v1
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OpenProt 2.0 builds a path to the functional characterization of alternative proteins.

S. Leblanc , F. Yala , N. Provencher , J. F. Lucier , M. Levesque et al.

Nucleic Acids Research, 2023, Nucleic Acids Research, ⟨10.1093/nar/gkad1050⟩

Article dans une revue hal-04423840v1
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Fallopian tube lesions as potential precursors of early ovarian cancer: a comprehensive proteomic analysis.

Maxence Wisztorski , Soulaimane Aboulouard , Lucas Roussel , Marie Duhamel , Philippe Saudemont et al.

Cell Death and Disease, 2023, Cell Death and Disease, 14, pp.644. ⟨10.1038/s41419-023-06165-5⟩

Article dans une revue hal-04400929v1
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Protocol to identify human subcellular alternative protein interactions using cross-linking mass spectrometry.

Diego-Fernando Garcia del Rio , Isabelle Fournier , Tristan Cardon , Michel Salzet

STAR Protocols, 2023, STAR Protocols, 4 (3), pp.102380. ⟨10.1016/j.xpro.2023.102380⟩

Article dans une revue hal-04400811v1
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Contribution of heterozygous PCSK1 variants to obesity and implications for precision medicine: a case-control study

Lise Folon , Morgane Baron , Bénédicte Toussaint , Emmanuel Vaillant , Mathilde Boissel et al.

The Lancet. Diabetes & Endocrinology , 2023, 11 (3), pp.182-190. ⟨10.1016/S2213-8587(22)00392-8⟩

Article dans une revue hal-04195164v1
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Astrocytes express aberrant immunoglobulins as putative gatekeeper of astrocytes to neuronal progenitor conversion

Alice Capuz , Sylvain Osien , Melodie-Anne Karnoub , Soulaimane Aboulouard , Estelle Laurent et al.

Cell Death and Disease, 2023, Cell Death and Disease, 14 (4), pp.237. ⟨10.1038/s41419-023-05737-9⟩

Article dans une revue hal-04278200v2
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Comparing MS imaging of lipids by WALDI and MALDI: two technologies for evaluating a common ground truth in MS imaging.

Lea Ledoux , Yanis Zirem , Florence Renaud , Ludovic Duponchel , Michel Salzet et al.

Analyst, 2023, Analyst, 148, pp.4982-4986. ⟨10.1039/d3an01096a⟩

Article dans une revue hal-04401014v2
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Prophylactic Radical Fimbriectomy with Delayed Oophorectomy in Women with a High Risk of Developing an Ovarian Carcinoma: Results of a Prospective National Pilot Study

Éric Leblanc , Fabrice Narducci , Gwénaël Ferron , Audrey Mailliez , Jean Yves Charvolin et al.

Cancers, 2023, 15 (4), ⟨10.3390/cancers15041141⟩

Article dans une revue hal-04068556v1

Heimdall, an alternative protein issued from a ncRNA related to kappa light chain variable region of immunoglobulins from astrocytes: a new player in neural proteome

Alice Capuz , Sylvain Osien , Tristan Cardon , Mélodie Anne Karnoub , Soulaimane Aboulouard et al.

Cell Death and Disease, 2023, 14 (8), pp.526. ⟨10.1038/s41419-023-06037-y⟩

Article dans une revue hal-04528686v1
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Challenges in glioblastoma research: focus on the tumor microenvironment

Andreas Bikfalvi , Cristine Alves da Costa , Tony Avril , Jean-Vianney Barnier , Luc Bauchet et al.

Trends in Cancer, 2023, 9 (1), pp.9-27. ⟨10.1016/j.trecan.2022.09.005⟩

Article dans une revue hal-03860005v1

Early Diagnosis: End-to-End CNN–LSTM Models for Mass Spectrometry Data Classification

Khawla Seddiki , Frédéric Precioso , Melissa Sanabria , Michel Salzet , Isabelle Fournier et al.

Analytical Chemistry, 2023, 95 (36), pp.13431-13437. ⟨10.1021/acs.analchem.3c00613⟩

Article dans une revue hal-04459618v1

Correction: Heimdall, an alternative protein issued from a ncRNA related to kappa light chain variable region of immunoglobulins from astrocytes: a new player in neural proteome

Alice Capuz , Sylvain Osien , Tristan Cardon , Mélodie Anne Karnoub , Soulaimane Aboulouard et al.

Cell Death and Disease, 2023, 14 (10), pp.677. ⟨10.1038/s41419-023-06143-x⟩

Article dans une revue hal-04278155v1
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Mass Spectrometry-Based Differentiation of Oral Tongue Squamous Cell Carcinoma and Nontumor Regions With the SpiderMass Technology

Nina Ogrinc , Christophe Attencourt , Emilien Colin , Ahmed Boudahi , Riad Tebbakha et al.

Frontiers in Oral Health, 2022, 3, ⟨10.3389/froh.2022.827360⟩

Article dans une revue hal-03722795v1
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On-tissue spatially resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape

Stacy Alyse Malaker , Jusal Quanico , Antonella Raffo-Romero , Firas Kobeissy , Soulaimane Aboulouard et al.

Cell Chemical Biology, 2022, 29 (1), pp.30-42.e4. ⟨10.1016/j.chembiol.2021.05.007⟩

Article dans une revue hal-04460596v1
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Direct In Vivo Analysis of CBD- and THC-Acid Cannabinoids and Classification of Cannabis Cultivars Using SpiderMass.

Nina Ogrinc , S. Schneider , A. Bourmaud , N. Gengler , Michel Salzet et al.

Metabolites, 2022, Metabolites, 12, ⟨10.3390/metabo12060480⟩

Article dans une revue hal-04412905v1

Trop-2, Na+/K+ ATPase, CD9, PKCα, cofilin assemble a membrane signaling super-complex that drives colorectal cancer growth and invasion

Emanuela Guerra , Valeria Relli , Martina Ceci , Romina Tripaldi , Pasquale Simeone et al.

Oncogene, 2022, 41 (12), pp.1795-1808. ⟨10.1038/s41388-022-02220-1⟩

Article dans une revue hal-04460581v1

The Antibody Dependant Neurite Outgrowth Modulation Response Involvement in Spinal Cord Injury

Alice Capuz , Mélodie-Anne Karnoub , Sylvain Osien , Mélanie Rose , Céline Mériaux et al.

Frontiers in Immunology, 2022, 13, ⟨10.3389/fimmu.2022.882830⟩

Article dans une revue hal-04278167v1
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Spatial analysis of the glioblastoma proteome reveals specific molecular signatures and markers of survival.

Marie Duhamel , L. Drelich , Maxence Wisztorski , Soulaimane Aboulouard , Jean-Pascal Gimeno et al.

Nature Communications, 2022, Nature Communications, 13, pp.6665. ⟨10.1038/s41467-022-34208-6⟩

Article dans une revue hal-04212126v1
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Path to clonal theranostics in luminal breast cancers

Nawale Hajjaji , Soulaimane Aboulouard , Tristan Cardon , Delphine Bertin , Yves-Marie Robin et al.

Frontiers in Oncology, 2022, Frontiers in Oncology, 11, pp.802177. ⟨10.3389/fonc.2021.802177⟩

Article dans une revue hal-04022193v1
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Unveiling a ghost proteome in the glioblastoma non-coding rnas

Tristan Cardon , Isabelle Fournier , Michel Salzet

Frontiers in Cell and Developmental Biology, 2021, Frontiers in Cell and Developmental Biology, 9, pp.703583. ⟨10.3389/fcell.2021.703583⟩

Article dans une revue hal-04011459v1
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Protein kinase c activation drives a differentiation program in an oligodendroglial precursor model through the modulation of specific biological networks

Marina Damato , Tristan Cardon , Maxence Wisztorski , Isabelle Fournier , Damiana Pieragostino et al.

International Journal of Molecular Sciences, 2021, International Journal of Molecular Sciences, 22 (10), pp.5245. ⟨10.3390/ijms22105245⟩

Article dans une revue hal-03967287v1
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The role of proprotein convertases in the regulation of the function of immune cells in the oncoimmune response

Melanie Rose , Marie Duhamel , Franck Rodet , Michel Salzet

Frontiers in Immunology, 2021, 12, pp.667850. ⟨10.3389/fimmu.2021.667850⟩

Article dans une revue hal-04018132v1
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Cancer surgery 2. 0: guidance by real-time molecular technologies

Nina Ogrinc , Philippe Saudemont , Zoltan Takats , Michel Salzet , Isabelle Fournier

Trends in Molecular Medicine, 2021, Trends in Molecular Medicine, 27 (6), pp.602-615. ⟨10.1016/j.molmed.2021.04.001⟩

Article dans une revue (article de synthèse) hal-05016823v1
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Robot-assisted spidermass for in vivo real-time topography mass spectrometry imaging

Nina Ogrinc , Alexandre Kruszewski , Paul Chaillou , Philippe Saudemont , Chann Lagadec et al.

Analytical Chemistry, 2021, Analytical Chemistry, ⟨10.1021/acs.analchem.1c01692⟩

Article dans une revue hal-03990566v1
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Shedding Light on the Ghost Proteome

Tristan Cardon , Isabelle Fournier , Michel Salzet

Trends in Biochemical Sciences, 2021, 46 (3), pp.239-250. ⟨10.1016/j.tibs.2020.10.003⟩

Article dans une revue hal-04446903v1

Neurotrauma investigation through spatial omics guided by mass spectrometry imaging: Target identification and clinical applications

Khalil Mallah , Kazem Zibara , Coline Kerbaj , Ali Eid , Nour Khoshman et al.

Mass Spectrometry Reviews, 2021, 42 (1), pp.189-205. ⟨10.1002/mas.21719⟩

Article dans une revue hal-04443805v1

Persistence of Coxsackievirus B4 in Pancreatic β Cells Disturbs Insulin Maturation, Pattern of Cellular Proteins, and DNA Methylation

Magloire Pandoua Nekoua , Antoine Bertin , Famara Sane , Jean-Pascal Gimeno , Isabelle Fournier et al.

Microorganisms, 2021, 9 (6), pp.1125. ⟨10.3390/microorganisms9061125⟩

Article dans une revue inserm-04456755v1
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Persistence of coxsackievirus b4 in pancreatic ? cells disturbs insulin maturation, pattern of cellular proteins, and dna methylation

Magloire Pandoua Nekoua , Antoine Bertin , Famara Sane , Jean-Pascal Gimeno , Isabelle Fournier et al.

Microorganisms, 2021, Microorganisms, 9 (6), pp.1125. ⟨10.3390/microorganisms9061125⟩

Article dans une revue hal-03955619v1
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Surfaceome proteomic of glioblastoma revealed potential targets for immunotherapy

Melanie Rose , Tristan Cardon , Soulaimane Aboulouard , Nawale Hajjaji , Firas Kobeissy et al.

Frontiers in Immunology, 2021, Frontiers in Immunology, 12, pp.746168. ⟨10.3389/fimmu.2021.746168⟩

Article dans une revue hal-04009596v1
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Therapeutic anti-glioma effect of the combined action of pcsk inhibitor with the anti-tumoral factors secreted by poly (i:c)-stimulated macrophages

Melanie Rose , Marie Duhamel , Soulaimane Aboulouard , Firas Kobeissy , Dominique Tierny et al.

Cancer Gene Therapy, 2021, Cancer Gene Therapy, 29, pp.22-36. ⟨10.1038/s41417-020-00286-1⟩

Article dans une revue hal-04009706v1
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In utero exposure to metformin reduces the fertility of male offspring in adulthood

Mélanie C. Faure , Rita Khoueiry , Jusal Quanico , Hervé Acloque , Marie-Justine Guerquin et al.

Frontiers in Endocrinology, 2021, 12, pp.1-18. ⟨10.3389/fendo.2021.750145⟩

Article dans une revue hal-03462578v1
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Direct water-assisted laser desorption/ionization mass spectrometry lipidomic analysis and classification of formalin-fixed paraffin-embedded sarcoma tissues without dewaxing

Nina Ogrinc , Pierre-Damien Caux , Yves-Marie Robin , Emmanuel Bouchaert , Benoit Fatou et al.

Clinical chemistry, 2021, 67 (11), pp.1513-1523. ⟨10.1093/clinchem/hvab160⟩

Article dans une revue hal-04019390v1
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Toward high spatially resolved proteomics using expansion microscopy

Lauranne Drelich , Soulaimane Aboulouard , Julien Franck , Michel Salzet , Isabelle Fournier et al.

Analytical Chemistry, 2021, Analytical Chemistry, 93 (36), pp.12195-12203. ⟨10.1021/acs.analchem.0c05372⟩

Article dans une revue hal-04011475v1
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In-depth proteomics analysis of sentinel lymph nodes from individuals with endometrial cancer

Soulaimane Aboulouard , Maxence Wisztorski , Marie Duhamel , Philippe Saudemont , Tristan Cardon et al.

Cell Reports Medicine, 2021, Cell Reports Medicine, 2 (6), pp.100318. ⟨10.1016/j.xcrm.2021.100318⟩

Article dans une revue hal-04009565v1

Spinal Cord Injury: Animal Models, Imaging Tools and the Treatment Strategies

Dasa Cizkova , Adriana-Natalia Murgoci , Veronika Cubinkova , Filip Humenik , Zuzana Mojzisova et al.

Neurochemical Research, 2020, 45 (1), pp.134-143. ⟨10.1007/s11064-019-02800-w⟩

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Carbonic Anhydrase XII Expression Is Modulated during Epithelial Mesenchymal Transition and Regulated through Protein Kinase C Signaling

Daniele Vergara , Sara Ravaioli , Eugenio Fonzi , Loredaria Adamo , Marina Damato et al.

International Journal of Molecular Sciences, 2020, 21 (3), pp.715. ⟨10.3390/ijms21030715⟩

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Reference and Ghost Proteins Identification in Rat C6 Glioma Extracellular Vesicles

Adriana-Natalia Murgoci , Tristan Cardon , Soulaimane Aboulouard , Marie Duhamel , Isabelle Fournier et al.

iScience, 2020, 23 (5), pp.101045. ⟨10.1016/j.isci.2020.101045⟩

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Cumulative learning enables convolutional neural network representations for small mass spectrometry data classification

Khawla Seddiki , Philippe Saudemont , Frédéric Precioso , Nina Ogrinc , Maxence Wisztorski et al.

Nature Communications, 2020, 11 (1), pp.5595. ⟨10.1038/s41467-020-19354-z⟩

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Canine Bone Marrow Mesenchymal Stem Cell Conditioned Media Affect Bacterial Growth, Biofilm-Associated Staphylococcus aureus and AHL-Dependent Quorum Sensing

Dobroslava Bujnakova , Anna Cuvalova , Milan Cizek , Filip Humenik , Michel Salzet et al.

Microorganisms, 2020, Microorganisms, 8 (10), pp.1478. ⟨10.3390/microorganisms8101478⟩

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Characterization of Immune Cell-derived Extracellular Vesicles and Studying Functional Impact on Cell Environment

Quentin Lemaire , Marie Duhamel , Antonella Raffo-Romero , Michel Salzet , Christophe Lefebvre

Journal of visualized experiments : JoVE, 2020, 160, Online ahead of print. ⟨10.3791/60118⟩

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Location of neonatal microglia drives small extracellular vesicles content and biological functions in vitro

Adriana-Natalia Murgoci , Marie Duhamel , Antonella Raffo-Romero , Khalil Mallah , Soulaimane Aboulouard et al.

Journal of Extracellular Vesicles, 2020, 9 (1), pp.1727637. ⟨10.1080/20013078.2020.1727637⟩

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Openprot 2021: deeper functional annotation of the coding potential of eukaryotic genomes

Marie A. Brunet , Jean-Francois Lucier , Maxime Levesque , Sebastien Leblanc , Jean-Francois Jacques et al.

Nucleic Acids Research, 2020, Nucleic Acids Research, 49 (D1), pp.D380-D388. ⟨10.1093/nar/gkaa1036⟩

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Liquid biopsies for diagnosing and monitoring primary tumors of the central nervous system

Emilie Le Rhun , Joan Seoane , Michel Salzet , Riccardo Soffietti , Michael Weller

Cancer Letters, 2020, 480, pp.24-28. ⟨10.1016/j.canlet.2020.03.021⟩

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Epigenetic Studies Revealed a Ghost Proteome in PC1/3 KD Macrophages under Antitumoral Resistance Induced by IL-10

Tristan Cardon , Bilgehan Ozcan , Soulaimane Aboulouard , Firas Kobeissy , Marie Duhamel et al. Article dans une revue hal-04445712v1
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Alternative proteins are functional regulators in cell reprogramming by PKA activation

Tristan Cardon , Julien Franck , Etienne Coyaud , Estelle Laurent , Marina Damato et al.

Nucleic Acids Research, 2020, 48 (14), pp.7864-7882. ⟨10.1093/nar/gkaa277⟩

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The Role of a Proprotein Convertase Inhibitor in Reactivation of Tumor-Associated Macrophages and Inhibition of Glioma Growth

Mélanie Rose , Marie Duhamel , Soulaimane Aboulouard , Firas Kobeissy , Emilie Le Rhun et al.

Molecular Therapy - Oncolytics, 2020, 17, pp.31-46. ⟨10.1016/j.omto.2020.03.005⟩

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Sars-cov-2 interactome with human ghost proteome: a neglected world encompassing a wealth of biological data

Tristan Cardon , Isabelle Fournier , Michel Salzet

Microorganisms, 2020, Microorganisms, 8 (12), pp.2036. ⟨10.3390/microorganisms8122036⟩

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A Hidden Human Proteome Signature Characterizes the Epithelial Mesenchymal Transition Program

Daniele Vergara , Tiziano Verri , Marina Damato , Marco Trerotola , Pasquale Simeone et al.

Current Pharmaceutical Design, 2020, 26 (3), pp.372-375. ⟨10.2174/1381612826666200129091610⟩

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Isolation of microglia-derived extracellular vesicles: towards miRNA signatures and neuroprotection

Quentin Lemaire , Antonella Raffo-Romero , Tanina Arab , Christelle van Camp , Francesco Drago et al.

Journal of Nanobiotechnology, 2019, 17 (1), pp.119. ⟨10.1186/s12951-019-0551-6⟩

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Canine Bone Marrow-derived Mesenchymal Stem Cells: Genomics, Proteomics and Functional Analyses of Paracrine Factors

Filip Humenik , Dasa Cizkova , Stefan Cikos , Lenka Luptakova , Aladar Madari et al.

Molecular and Cellular Proteomics, 2019, 18 (9), pp.1824-1835. ⟨10.1074/mcp.RA119.001507⟩

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ALK4/5-dependent TGF-β signaling contributes to the crosstalk between neurons and microglia following axonal lesion

Antonella Raffo-Romero , Tanina Arab , Christelle van Camp , Quentin Lemaire , Maxence Wisztorski et al.

Scientific Reports, 2019, 9 (1), pp.6896. ⟨10.1038/s41598-019-43328-x⟩

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Proteomic profile of high-risk luminal A early breast cancers.

Nawale Hajjaji , Soulaimane Aboulouard , Yves-Marie Robin , Delphine Bertin , Isabelle Fournier et al.

Journal of Clinical Oncology, 2019, 37 (15_suppl), pp.3077-3077. ⟨10.1200/JCO.2019.37.15_suppl.3077⟩

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The multiverse nature of epithelial to mesenchymal transition

Pasquale Simeone , Marco Trerotola , Julien Franck , Tristan Cardon , Marco Marchisio et al.

Seminars in Cancer Biology, 2019, 58, pp.1-10. ⟨10.1016/j.semcancer.2018.11.004⟩

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Nuclei of HeLa cells interactomes unravel a network of ghost proteins involved in proteins translation

Tristan Cardon , Michel Salzet , Julien Franck , Isabelle Fournier

Biochimica et Biophysica Acta (BBA) - General Subjects, 2019, 1863 (10), pp.1458-1470. ⟨10.1016/j.bbagen.2019.05.009⟩

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Distinct Protein Expression Networks are Activated in Microglia Cells after Stimulation with IFN-γ and IL-4

Daniele Vergara , Annamaria Nigro , Alessandro Romano , Stefania de Domenico , Marina Damato et al.

Cells, 2019, 8 (6), pp.580. ⟨10.3390/cells8060580⟩

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Matrix-Assisted Laser Desorption/Ionization-Mass Spectrometry Imaging of Lipids in Experimental Model of Traumatic Brain Injury Detecting Acylcarnitines as Injury Related Markers

Khalil Mallah , Jusal Quanico , Antonella Raffo-Romero , Tristan Cardon , Soulaimane Aboulouard et al.

Analytical Chemistry, 2019, 91 (18), pp.11879-11887. ⟨10.1021/acs.analchem.9b02633⟩

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A specific lipid metabolic profile is associated with the epithelial mesenchymal transition program

Anna Maria Giudetti , Stefania de Domenico , Andrea Ragusa , Paola Lunetti , Antonio Gaballo et al.

Biochimica et Biophysica Acta Molecular and Cell Biology of Lipids, 2019, 1864 (3), pp.344-357. ⟨10.1016/j.bbalip.2018.12.011⟩

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Optimized Sample Preparation Workflow for Improved Identification of Ghost Proteins

Tristan Cardon , Flore Hervé , Vivian Delcourt , Xavier Roucou , Michel Salzet et al.

Analytical Chemistry, 2019, 92 (1), pp.1122-1129. ⟨10.1021/acs.analchem.9b04188⟩

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Water-assisted laser desorption/ionization mass spectrometry for minimally invasive in vivo and real-time surface analysis using SpiderMass

Nina Ogrinc , Philippe Saudemont , Julia Balog , Yves-Marie Robin , Jean-Pascal Gimeno et al.

Nature Protocols, 2019, 14 (11), pp.3162-3182. ⟨10.1038/s41596-019-0217-8⟩

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Proteomic characterisation of leech microglia extracellular vesicles (EVs): comparison between differential ultracentrifugation and Optiprep™ density gradient isolation

T Arab , A Raffo-Romero , C van Camp , Q Lemaire , F Le Marrec-Croq et al.

Journal of Extracellular Vesicles, 2019, 8 (1), pp.1603048. ⟨10.1080/20013078.2019.1603048⟩

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Mass spectrometry-based intraoperative tumor diagnostics: a letter in reply

Isabelle Fournier , Michel Salzet

Future Science OA, 2019, 5 (7), pp.FSO403. ⟨10.2144/fsoa-2019-0037⟩

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PC1/3 KD Macrophages Exhibit Resistance to the Inhibitory Effect of IL-10 and a Higher TLR4 Activation Rate, Leading to an Anti-Tumoral Phenotype

Franck Rodet , Alice Capuz , Bilgehan-Aybike Ozcan , Rémy Le Beillan , Antonella Raffo-Romero et al.

Cells, 2019, 8 (12), pp.1490. ⟨10.3390/cells8121490⟩

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Utilisation of Ambient Laser Desorption Ionisation Mass Spectrometry (ALDI-MS) Improves Lipid-Based Microbial Species Level Identification

Simon Cameron , Zsolt Bodai , Burak Temelkuran , Alvaro Perdones-Montero , Frances Bolt et al.

Scientific Reports, 2019, 9 (1), pp.3006. ⟨10.1038/s41598-019-39815-w⟩

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Mapping Spatiotemporal Microproteomics Landscape in Experimental Model of Traumatic Brain Injury Unveils a link to Parkinson's Disease

Khalil Mallah , Jusal Quanico , Antonella Raffo-Romero , Tristan Cardon , Soulaimane Aboulouard et al.

Molecular and Cellular Proteomics, 2019, 18 (8), pp.1669-1682. ⟨10.1074/mcp.RA119.001604⟩

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Real time and in vivo pharmaceutical and environmental studies with SpiderMass instrument

B. Fatou , P. Saudemont , M. Duhamel , Michael Ziskind , C. Focsa et al.

Journal of Biotechnology, 2018, 281, pp.61-66. ⟨10.1016/j.jbiotec.2018.06.339⟩

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β-catenin knockdown promotes NHERF1-mediated survival of colorectal cancer cells: implications for a double-targeted therapy

Concetta Saponaro , Sara Sergio , Antonio Coluccia , Maria de Luca , Giuseppe La Regina et al.

Oncogene, 2018, 37 (24), pp.3301-3316. ⟨10.1038/s41388-018-0170-y⟩

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Temporally and spatially-resolved microproteomics and MALDI MSI lipidomic analysis for traumatic brain injury biomarker identification

Khalil Mallah , Jusal Quanico , Firas Kobeissy , Kazem Zibara , Michel Salzet et al.

African Journal of Biotechnology, 2018, 280S, pp.S8. ⟨10.1016/j.jbiotec.2018.06.327⟩

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The Protein Coded by a Short Open Reading Frame, Not by the Annotated Coding Sequence, Is the Main Gene Product of the Dual-Coding Gene MIEF1

Vivian Delcourt , Mylène Brunelle , Annie Roy , Jean-François Jacques , Michel Salzet et al.

Molecular and Cellular Proteomics, 2018, 17 (12), pp.2402-2411. ⟨10.1074/mcp.RA118.000593⟩

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Proteomic expression profile of injured rat peripheral nerves revealed biological networks and processes associated with nerve regeneration

Daniele Vergara , Alessandro Romano , Eleonora Stanca , Velia La Pesa , Laura Aloisi et al.

Journal of Cellular Physiology, 2018, 233 (8), pp.6207-6223. ⟨10.1002/jcp.26478⟩

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Small Proteins Encoded by Unannotated ORFs are Rising Stars of the Proteome, Confirming Shortcomings in Genome Annotations and Current Vision of an mRNA

Vivian Delcourt , Antanas Staskevicius , Michel Salzet , Isabelle Fournier , Xavier Roucou

Proteomics, 2018, 18 (10), pp.1700058. ⟨10.1002/pmic.201700058⟩

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Remote Atmospheric Pressure Infrared Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry (Remote IR-MALDI MS) of Proteins

Benoit Fatou , Michael Ziskind , Philippe Saudemont , Jusal Quanico , Cristian Focsa et al.

Molecular and Cellular Proteomics, 2018, 17 (8), pp.1637-1649. ⟨10.1074/mcp.TIR117.000582⟩

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Deciphering molecular consequences of the proprotein convertase 1/3 inhibition in macrophages for application in anti-tumour immunotherapy

Franck Rodet , Alice Capuz , Tsukasa Hara , Rinaldo van Meel , Marie Duhamel et al.

Journal of Biotechnology, 2018, 282, pp.80-85. ⟨10.1016/j.jbiotec.2018.07.002⟩

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Medicinal Leech CNS as a Model for Exosome Studies in the Crosstalk between Microglia and Neurons

Antonella Raffo-Romero , Tanina Arab , Issa S. Al-Amri , Francoise Le Marrec-Croq , Christelle van Camp et al.

International Journal of Molecular Sciences, 2018, 19 (12), pp.4124. ⟨10.3390/ijms19124124⟩

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Lipid Changes Associated with Traumatic Brain Injury Revealed by 3D MALDI-MSI

Khalil Mallah , Jusal Quanico , Dennis Trede , Firas Kobeissy , Kazem Zibara et al.

Analytical Chemistry, 2018, 90 (17), pp.10568-10576. ⟨10.1021/acs.analchem.8b02682⟩

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Brain-Cortex Microglia-Derived Exosomes: Nanoparticles for Glioma Therapy

Adriana-Natalia Murgoci , Dasa Cizkova , Petra Majerova , Eva Petrovova , Lubomir Medvecky et al.

ChemPhysChem, 2018, 19 (10), pp.1205-1214. ⟨10.1002/cphc.201701198⟩

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Extracellular vesicles: pathogenetic, diagnostic and therapeutic value in traumatic brain injury

Stefania Mondello , Eric Thelin , Gerry Shaw , Michel Salzet , Carmela Visalli et al.

Expert Review of Proteomics, 2018, 15 (5), pp.451-461. ⟨10.1080/14789450.2018.1464914⟩

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3D MALDI mass spectrometry imaging reveals specific localization of long-chain acylcarnitines within a 10-day time window of spinal cord injury

Jusal Quanico , Lena Hauberg-Lotte , Stephanie Devaux , Zahra Laouby , Celine Meriaux et al.

Scientific Reports, 2018, 8 (1), pp.16083. ⟨10.1038/s41598-018-34518-0⟩

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Oxidative Stress in Aging Brain: Nutritional and Pharmacological Interventions for Neurodegenerative Disorders

Anna Maria Giudetti , Michel Salzet , Tommaso Cassano

Oxidative Medicine and Cellular Longevity, 2018, 2018, pp.3416028. ⟨10.1155/2018/3416028⟩

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Localized Intrathecal Delivery of Mesenchymal Stromal Cells Conditioned Medium Improves Functional Recovery in a Rat Model of Spinal Cord Injury

Dasa Cizkova , Veronika Cubinkova , Tomas Smolek , Adriana-Natalia Murgoci , Jan Danko et al.

International Journal of Molecular Sciences, 2018, 19 (3), pp.870. ⟨10.3390/ijms19030870⟩

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Paclitaxel Treatment and Proprotein Convertase 1/3 (PC1/3) Knockdown in Macrophages is a Promising Antiglioma Strategy as Revealed by Proteomics and Cytotoxicity Studies

Marie Duhamel , Mélanie Rose , Franck Rodet , Adriana Natalia Murgoci , Lea Zografidou et al.

Molecular and Cellular Proteomics, 2018, 17 (6), pp.1126-1143. ⟨10.1074/mcp.RA117.000443⟩

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Shedding new light on spinal cord injury

Michel Salzet , Jusal Quanico , Dasa Cizkova , Melodie Anne Karnoub , Zarha Laouby et al.

Journal of Biotechnology, 2018, 280, pp.S4. ⟨10.1016/j.jbiotec.2018.06.314⟩

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Can real time molecular analyses change the paradigm of dog sarcoma diagnosis and classification?

Isabelle Fournier , Philippe Saudemont , Jusal Quanico , Benoit Fatou , Kevin Minier et al.

Journal of Biotechnology, 2018, 280, pp.S4. ⟨10.1016/j.jbiotec.2018.06.315⟩

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Real-Time Molecular Diagnosis of Tumors Using Water-Assisted Laser Desorption/Ionization Mass Spectrometry Technology

Philippe Saudemont , Jusal Quanico , Yves-Marie Robin , Anna Baud , Julia Balog et al.

Cancer Cell, 2018, 34 (5), pp.840-851.e4. ⟨10.1016/j.ccell.2018.09.009⟩

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Spatially-Resolved Top-down Proteomics Bridged to MALDI MS Imaging Reveals the Molecular Physiome of Brain Regions

Vivian Delcourt , Julien Franck , Jusal Quanico , Jean-Pascal Gimeno , Maxence Wisztorski et al.

Molecular and Cellular Proteomics, 2018, 17 (2), pp.357-372. ⟨10.1074/mcp.M116.065755⟩

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Combined Mass Spectrometry Imaging and Top-down Microproteomics Reveals Evidence of a Hidden Proteome in Ovarian Cancer

Vivian Delcourt , Julien Franck , Eric Leblanc , Fabrice Narducci , Yves-Marie Robin et al.

EBioMedicine, 2017, 21, pp.55-64. ⟨10.1016/j.ebiom.2017.06.001⟩

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β-Catenin Knockdown Affects Mitochondrial Biogenesis and Lipid Metabolism in Breast Cancer Cells

Daniele Vergara , Eleonora Stanca , Flora Guerra , Paola Priore , Antonio Gaballo et al.

Frontiers in Physiology, 2017, 8, ⟨10.3389/fphys.2017.00544⟩

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Integrated mass spectrometry imaging and omics workflows on the same tissue section using grid-aided, parafilm-assisted microdissection

Jusal Quanico , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier

Biochimica et Biophysica Acta (BBA) - General Subjects, 2017, 1861 (7), pp.1702-1714. ⟨10.1016/j.bbagen.2017.03.006⟩

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NanoLC-MS coupling of liquid microjunction microextraction for on-tissue proteomic analysis

Jusal Quanico , Julien Franck , Tristan Cardon , Eric Leblanc , Maxence Wisztorski et al.

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2017, 1865 (7), pp.891-900. ⟨10.1016/j.bbapap.2016.11.002⟩

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RhoA Inhibitor Treatment At Acute Phase of Spinal Cord Injury May Induce Neurite Outgrowth and Synaptogenesis

Stephanie Devaux , Dasa Cizkova , Khalil Mallah , Melodie Anne Karnoub , Zahra Laouby et al.

Molecular and Cellular Proteomics, 2017, 16 (8), pp.1394 - 1415. ⟨10.1074/mcp.M116.064881⟩

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β-Catenin Knockdown Affects Mitochondrial Biogenesis and Lipid Metabolism in Breast Cancer Cells

Daniele Vergara , Eleonora Stanca , Flora Guerra , Paola Priore , Antonio Gaballo et al.

Frontiers in Physiology, 2017, 8, pp.544. ⟨10.3389/fphys.2017.00544⟩

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Evaluation of non-supervised MALDI mass spectrometry imaging combined with microproteomics for glioma grade III classification

Emilie Le Rhun , Marie Duhamel , Maxence Wisztorski , Jean-Pascal Gimeno , Fahed Zairi et al.

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, 2017, 1865 (7), pp.875-890. ⟨10.1016/j.bbapap.2016.11.012⟩

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Proteomic and transcriptomic investigation of acne vulgaris microcystic and papular lesions: Insights in the understanding of its pathophysiology

Jusal Quanico , Jean-Pascal Gimeno , Florence Nadal-Wollbold , Christiane Casas , Sandrine Alvarez-Georges et al.

Biochimica et Biophysica Acta (BBA) - General Subjects, 2017, 1861 (3), pp.652-663. ⟨10.1016/j.bbagen.2016.10.021⟩

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The proprotein convertase PC1/3 regulates TLR9 trafficking and the associated signaling pathways

M. Duhamel , F. Rodet , A. Murgoci , R. Desjardins , H. Gagnon et al.

Scientific Reports, 2016, 6, pp.19360. ⟨10.1038/srep19360⟩

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Aspects immunologiques du cancer de l’ovaire : perspectives thérapeutiques

M. Nayama , P. Collinet , Michel Salzet , D. Vinatier

Journal de Gynécologie Obstétrique et Biologie de la Reproduction, 2016, 45 (9), pp.1020-1036. ⟨10.1016/j.jgyn.2016.05.005⟩

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Host manipulation by cancer cells: Expectations, facts, and therapeutic implications

Tazzio Tissot , Audrey Arnal , Camille Jacqueline , Robert Poulin , Thierry Lefèvre et al.

BioEssays, 2016, 38 (3), pp.276-285. ⟨10.1002/bies.201500163⟩

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Proprotein convertase 1/3 inhibited macrophages: A novel therapeutic based on drone macrophages

Marie Duhamel , Franck Rodet , Adriana Murgoci , Maxence Wisztorski , Robert Day et al.

EuPA Open Proteomics, 2016, 11, pp.20-22. ⟨10.1016/j.euprot.2016.03.003⟩

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Cancer and life-history traits: lessons from host–parasite interactions

Beata Ujvari , Christa Beckmann , Peter A Biro , Audrey Arnal , Aurélie Tasiemski et al.

Parasitology, 2016, 143 (5), pp.533-541. ⟨10.1017/S0031182016000147⟩

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Translating epithelial mesenchymal transition markers into the clinic: Novel insights from proteomics

Daniele Vergara , Pasquale Simeone , Julien Franck , Marco Trerotola , Anna Giudetti et al.

EuPA Open Proteomics, 2016, 10, pp.31-41. ⟨10.1016/j.euprot.2016.01.003⟩

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Proteomic Analysis of the Spatio-temporal Based Molecular Kinetics of Acute Spinal Cord Injury Identifies a Time- and Segment-specific Window for Effective Tissue Repair

Stephanie Devaux , Dasa Cizkova , Jusal Quanico , Julien Franck , Serge Nataf et al.

Molecular and Cellular Proteomics, 2016, 15 (8), pp.2641-2670. ⟨10.1074/mcp.M115.057794⟩

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In vivo Real-Time Mass Spectrometry for Guided Surgery Application

Benoit Fatou , Philippe Saudemont , Eric Leblanc , Denis Vinatier , Violette Mesdag et al.

Scientific Reports, 2016, 6, pp.25919. ⟨10.1038/srep25919⟩

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Spatially-resolved protein surface microsampling from tissue sections using liquid extraction surface analysis

Maxence Wisztorski , Annie Desmons , Jusal Quanico , Benoit Fatou , Jean-Pascal Gimeno et al.

Proteomics, 2016, 16 (11-12), pp.1622-1632. ⟨10.1002/pmic.201500508⟩

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A Proteomic Analysis of Human Uterine Myoma

Antonio Rizzello , Julien Franck , Marcello Pellegrino , Francesco Nuccio , Pasquale Simeone et al.

Current Protein and Peptide Science, 2016, 18 (2), pp.167-174. ⟨10.2174/1389203717666160322150603⟩

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On-tissue Direct Monitoring of Global Hydrogen/Deuterium Exchange by MALDI Mass Spectrometry: Tissue Deuterium Exchange Mass Spectrometry (TDXMS)

Jusal Quanico , Julien Franck , Michel Salzet , Isabelle Fournier

Molecular and Cellular Proteomics, 2016, 15 (10), pp.3321-3330. ⟨10.1074/mcp.O116.059832⟩

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Proteome-wide characterization of signalling interactions in the hippocampal CA4/DG subfield of patients with Alzheimer’s disease

Jae Ho Kim , Julien Franck , Taewook Kang , Helmut Heinsen , Rivka Ravid et al.

Scientific Reports, 2015, 5, pp.11138. ⟨10.1038/srep11138⟩

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Substrate-Mediated Laser Ablation under Ambient Conditions for Spatially-Resolved Tissue Proteomics

Benoit Fatou , Maxence Wisztorski , Cristian Focsa , Michel Salzet , Michael Ziskind et al.

Scientific Reports, 2015, 5, pp.18135. ⟨10.1038/srep18135⟩

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Reciprocal immune benefit based on complementary production of antibiotics by the leech Hirudo verbana and its gut symbiont Aeromonas veronii

Aurélie Tasiemski , François Massol , Virginie Cuvillier-Hot , Céline Boidin-Wichlacz , Emmanuel Roger et al.

Scientific Reports, 2015, 5, pp.17498. ⟨10.1038/srep17498⟩

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Parafilm-assisted microdissection: a sampling method for mass spectrometry-based identification of differentially expressed prostate cancer protein biomarkers

J. Quanico , J. Franck , J. Gimeno , R. Sabbagh , Michel Salzet et al.

Chemical Communications, 2015, 51 (22), pp.4564-4567. ⟨10.1039/c4cc08331h⟩

Article dans une revue inserm-02940232v1
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Delivery of Alginate Scaffold Releasing Two Trophic Factors for Spinal Cord Injury Repair

I. Grulova , L. Slovinska , J. Blaško , S. Devaux , M. Wisztorski et al.

Scientific Reports, 2015, 5, pp.13702. ⟨10.1038/srep13702⟩

Article dans une revue inserm-02940249v1

The influence of sustained dual-factor presentation on the expansion and differentiation of neural progenitors in affinity-binding alginate scaffolds

Dasa Cizkova , Lucia Slovinska , Ivana Grulova , Michel Salzet , Stefan Cikos et al.

Journal of Tissue Engineering and Regenerative Medicine, 2015, 9 (8), pp.918-929. ⟨10.1002/term.1797⟩

Article dans une revue istex inserm-02940258v1

Alterations of protein composition along the rostro-caudal axis after spinal cord injury: proteomic, in vitro and in vivo analyses

Dasa Cizkova , Julien Franck , Lucia Slovinska , Ivana Grulova , Christophe Lefebvre et al.

Frontiers in Cellular Neuroscience, 2014, 8, ⟨10.3389/fncel.2014.00105⟩

Article dans une revue hal-04455729v1

Chirurgie annexielle prophylactique des femmes à risque héréditaire : vers de nouvelles pistes ?

E. Leblanc , P. Vennin , F. Narducci , B. Merlot , L. Bresson et al.

Oncologie, 2014, 16 (9-10), pp.438-444. ⟨10.1007/s10269-014-2451-6⟩

Article dans une revue inserm-02941738v1

Modulation properties of factors released by bone marrow stromal cells on activated microglia: an in vitro study

Dasa Cizkova , Stéphanie Devaux , Françoise Le Marrec-Croq , Julien Franck , Lucia Slovinska et al.

Scientific Reports, 2014, 4 (1), pp.7514. ⟨10.1038/srep07514⟩

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Calreticulin contributes to C1q-dependent recruitment of microglia in the leech Hirudo medicinalis following a CNS injury

Francoise Le Marrec-Croq , Annelise Bocquet-Garcon , Jacopo Vizioli , Christelle Vancamp , Francesco Drago et al.

Medical Science Monitor, 2014, 20, pp.644-653. ⟨10.12659/MSM.890091⟩

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Human temporal lobe epilepsy analyses by tissue proteomics

Céline Mériaux , Julien Franck , Dan Bi Park , Jusal Quanico , Young Hye Kim et al.

Hippocampus, 2014, 24 (6), pp.628-642. ⟨10.1002/hipo.22246⟩

Article dans une revue istex hal-04455749v1

Development of liquid microjunction extraction strategy for improving protein identification from tissue sections

Jusal Quanico , Julien Franck , Claire Dauly , Kerstin Strupat , Jocelyn Dupuy et al.

Journal of Proteomics, 2013, 79, pp.200-218. ⟨10.1016/j.jprot.2012.11.025⟩

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Microproteomics by liquid extraction surface analysis: Application to FFPE tissue to study the fimbria region of tubo‐ovarian cancer

Maxence Wisztorski , Benoit Fatou , Julien Franck , Annie Desmons , Isabelle Farré et al.

PROTEOMICS - Clinical Applications, 2013, 7 (3-4), pp.234-240. ⟨10.1002/prca.201200070⟩

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Ionic matrices pre-spotted matrix-assisted laser desorption/ionization plates for patient maker following in course of treatment, drug titration, and MALDI mass spectrometry imaging

David Bonnel , Julien Franck , Céline Mériaux , Michel Salzet , Isabelle Fournier

Analytical Biochemistry, 2013, 434 (1), pp.187-198. ⟨10.1016/j.ab.2012.10.035⟩

Article dans une revue istex hal-04455799v1

Quantification-Based Mass Spectrometry Imaging of Proteins by Parafilm Assisted Microdissection

Julien Franck , Jusal Quanico , Maxence Wisztorski , Robert Day , Michel Salzet et al.

Analytical Chemistry, 2013, 85 (17), pp.8127-8134. ⟨10.1021/ac4009397⟩

Article dans une revue hal-04455753v1
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Interaction of HmC1q with leech microglial cells: involvement of C1qBP-related molecule in the induction of cell chemotaxis

Muriel Tahtouh , Annelise Garcon-Bocquet , Françoise Croq , Jacopo Vizioli , Pierre-Eric Sautiere et al.

Journal of Neuroinflammation, 2012, 9, ⟨10.1186/1742-2094-9-37⟩

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TARGETED MASS spectrometry Imaging: Specific Targeting Mass Spectrometry imaging technologies from history to perspective

Hugo Gagnon , Julien Franck , Maxence Wisztorski , Robert Day , Isabelle Fournier et al.

Progress in Histochemistry and Cytochemistry, 2012, 47 (3), pp.133-174. ⟨10.1016/j.proghi.2012.08.002⟩

Article dans une revue istex hal-04455827v1
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[PAIR-gynaecology: multi/interdisciplinary for gynecologic cancer research. Problems needed to be resolved].

Isabelle Ray-Coquard , Franck Chauvin , Eric Leblanc , Christophe Caux , Hélène Hoarau et al.

Bulletin du Cancer, 2012, 99 (4), pp.479-98. ⟨10.1684/bdc.2012.1558⟩

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Multivariate analyses for biomarkers hunting and validation through on-tissue bottom-up or in-source decay in MALDI-MSI: application to prostate cancer

David Bonnel , Rémi Longuespee , Julien Franck , Morad Roudbaraki , Pierre Gosset et al.

Analytical and Bioanalytical Chemistry, 2011, 401 (1), pp.149-165. ⟨10.1007/s00216-011-5020-5⟩

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MALDI mass spectrometry imaging of proteins exceeding 30,000 daltons.

Julien Franck , Rémi Longuespée , Maxence Wisztorski , Alexandra van Remoortere , René van Zeijl et al.

Medical Science Monitor, 2010, 16 (9), pp.BR293-9

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The receptor protein tyrosine phosphatase HmLAR1 is up-regulated in the CNS of the adult medicinal leech following injury and is required for neuronal sprouting and regeneration

Jasmine Sethi , Bailey Zhao , Virginie Cuvillier-Hot , Céline Boidin-Wichlacz , Michel Salzet et al.

Molecular and Cellular Neuroscience, 2010, 45 (4), pp.430-438. ⟨10.1016/j.mcn.2010.08.002⟩

Article dans une revue istex hal-03964336v1

MALDI imaging mass spectrometry in ovarian cancer for tracking, identifying, and validating biomarkers.

Mohamed El Ayed , David Bonnel , Remi Longuespée , Céline Castelier , Julien Franck et al.

Medical Science Monitor, 2010, 16 (8), pp.BR233-45

Article dans une revue hal-04456012v1

Liquid ionic matrixes for MALDI mass spectrometry imaging of lipids

Céline Meriaux , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier

Journal of Proteomics, 2010, 73 (6), pp.1204-1218. ⟨10.1016/j.jprot.2010.02.010⟩

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MALDI imaging and profiling MS of higher mass proteins from tissue

Alexandra Van Remoortere , René van Zeijl , Nico van den Oever , Julien Franck , Rémi Longuespée et al.

Journal of The American Society for Mass Spectrometry, 2010, 21 (11), pp.1922-1929. ⟨10.1016/j.jasms.2010.07.011⟩

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MALDI imaging mass spectrometry: state of the art technology in clinical proteomics

Julien Franck , Karim Arafah , Mohamed Elayed , David Bonnel , Daniele Vergara et al.

Molecular and Cellular Proteomics, 2009, 8 (9), pp.2023-2033. ⟨10.1074/mcp.R800016-MCP200⟩

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Improving Tissue Preparation for Matrix-Assisted Laser Desorption Ionization Mass Spectrometry Imaging. Part 1: Using Microspotting

Julien Franck , Karim Arafah , Alan Barnes , Maxence Wisztorski , Michel Salzet et al.

Analytical Chemistry, 2009, 81 (19), pp.8193-8202. ⟨10.1021/ac901328p⟩

Article dans une revue hal-04456031v1
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Ex-vivo detection of neural events using THz BioMEMS

Abdennour Abbas , Thomas Dargent , Dominique Croix , Michel Salzet , Bertrand Bocquet

Medical Science Monitor, 2009, 15 (9), pp.MT121-125

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Detergent addition to tryptic digests and ion mobility separation prior to MS/MS improves peptide yield and protein identification for in situ proteomic investigation of frozen and formalin‐fixed paraffin‐embedded adenocarcinoma tissue sections

Marie‐claude Djidja , Simona Francese , Paul Loadman , Chris Sutton , Peter Scriven et al.

Proteomics, 2009, 9 (10), pp.2750-2763. ⟨10.1002/pmic.200800624⟩

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Tissue imaging using MALDI-MS: a new frontier of histopathology proteomics.

Isabelle Fournier , Maxence Wisztorski , Michel Salzet

Expert Review of Proteomics, 2008, 5 (3), pp.413-24. ⟨10.1586/14789450.5.3.413⟩

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Molecular MALDI imaging: an emerging technology for neuroscience studies.

Maxence Wisztorski , Dominique Croix , Eduardo Macagno , Isabelle Fournier , Michel Salzet

Developmental Neurobiology, 2008, 68 (6), pp.845-58. ⟨10.1002/dneu.20623⟩

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Microbial challenge promotes the regenerative process of the injured central nervous system of the medicinal leech by inducing the synthesis of antimicrobial peptides in neurons and microglia.

David Schikorski , Virginie Cuvillier-Hot , Matthias Leippe , Céline Boidin-Wichlacz , Christian Slomianny et al.

Journal of Immunology, 2008, 181 (2), pp.1083-95

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Cathepsin L and cystatin B gene expression discriminates immune coelomic cells in the leech Theromyzon tessulatum.

Christophe Lefebvre , Franck Vandenbulcke , Béatrice Bocquet , Aurélie Tasiemski , Annie Desmons et al.

Developmental and Comparative Immunology, 2008, 32 (7), pp.795-807. ⟨10.1016/j.dci.2007.11.007⟩

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MITICS (MALDI Imaging Team Imaging Computing System): a new open source mass spectrometry imaging software.

Olivia Jardin-Mathé , David Bonnel , Julien Franck , Maxence Wisztorski , Eduardo Macagno et al.

Journal of Proteomics, 2008, 71 (3), pp.332-45. ⟨10.1016/j.jprot.2008.07.004⟩

Article dans une revue istex hal-00350101v1

Evidence for a novel chemotactic C1q domain-containing factor in the leech nerve cord.

Muriel Tahtouh , Françoise Croq , Jacopo Vizioli , Pierre-Eric Sautiere , Christelle van Camp et al.

Molecular Immunology, 2008, epub ahead of print. ⟨10.1016/j.molimm.2008.07.026⟩

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Characterization of the first non-insect invertebrate functional angiotensin-converting enzyme: leech TtACE resembles the N-domain of mammalian ACE

Guillaume Rivière , Annie Michaud , Laurence Deloffre , Franck Vandenbulcke , Angélique Levoye et al.

Biochemical Journal, 2004, 382 (2), pp.565-573. ⟨10.1042/BJ20040522⟩

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Up-regulation of Neurohemerythrin Expression in the Central Nervous System of the Medicinal Leech, Hirudo medicinalis, following Septic Injury

David Vergote , Pierre-Eric Sautière , Franck Vandenbulcke , Didier Vieau , Guillaume Mitta et al.

Journal of Biological Chemistry, 2004, 279 (42), pp.43828-43837. ⟨10.1074/jbc.m403073200⟩

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Transcriptomic analysis in the leech Theromyzon tessulatum: involvement of cystatin B in innate immunity

Christophe Lefebvre , Claude Cocquerelle , Franck Vandenbulcke , David Hot , Ludovic Huot et al.

Biochemical Journal, 2004, 380 (3), pp.617-625. ⟨10.1042/bj20040478⟩

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Molecular Characterization of Two Novel Antibacterial Peptides Inducible upon Bacterial Challenge in an Annelid, the Leech Theromyzon tessulatum

Aurélie Tasiemski , Franck Vandenbulcke , Guillaume Mitta , Jérôme Lemoine , Christophe Lefebvre et al.

Journal of Biological Chemistry, 2004, 279 (30), pp.30973-30982. ⟨10.1074/jbc.m312156200⟩

Article dans une revue hal-05556767v1

Presence of chromogranin-derived antimicrobial peptides in plasma during coronary artery bypass surgery and evidence of an immune origin of these peptides

Aurélie Tasiemski , Hamida Hammad , Franck Vandenbulcke , Christophe Breton , Thomas Bilfinger et al.

Blood, 2002, 100 (2), pp.553-559. ⟨10.1182/blood.v100.2.553⟩

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Evidence for an endocannabinoid system in the central nervous system of the leech Hirudo medicinalis

Isabel Matias , Tiziana Bisogno , Dominique Melck , Franck Vandenbulcke , Martine Verger-Bocquet et al.

Molecular Brain Research, 2001, 87 (2), pp.145-159. ⟨10.1016/s0169-328x(00)00290-4⟩

Article dans une revue istex hal-05556708v1

Differential distribution and defence involvement of antimicrobial peptides in mussel

Guillaume Mitta , Franck Vandenbulcke , Thierry Noël , Bernard Romestand , Jean Claude Beauvillain et al.

Journal of Cell Science, 2000, 113 (15), pp.2759-2769. ⟨10.1242/jcs.113.15.2759⟩

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Therostasin, a Novel Clotting Factor Xa Inhibitor from the Rhynchobdellid Leech, Theromyzon tessulatum

Vincent Chopin , Michel Salzet , Jean-Luc Baert , Franck Vandenbulcke , Pierre-Eric Sautière et al.

Journal of Biological Chemistry, 2000, 275 (42), pp.32701-32707. ⟨10.1074/jbc.m909217199⟩

Article dans une revue hal-05556863v1

Involvement of Mytilins in Mussel Antimicrobial Defense

Guillaume Mitta , Franck Vandenbulcke , Florence Hubert , Michel Salzet , Philippe Roch

Journal of Biological Chemistry, 2000, 275 (17), pp.12954-12962. ⟨10.1074/jbc.275.17.12954⟩

Article dans une revue hal-05556758v1

Leech egg-laying-like hormone: structure, neuronal distribution and phylogeny

Michel Salzet , Martine Verger-Bocquet , Franck Vandenbulcke , Jan van Minnen

Molecular Brain Research, 1997, 49 (1-2), pp.211-221. ⟨10.1016/s0169-328x(97)00145-9⟩

Article dans une revue istex hal-05556724v1

Biochemical identification and ganglionic localization of leech angiotensin-converting enzymes

Franck Vandenbulcke , Virginie Laurent , Martine Verger-Bocquet , George Stefano , Michel Salzet

Molecular Brain Research, 1997, 49 (1-2), pp.229-237. ⟨10.1016/s0169-328x(97)00146-0⟩

Article dans une revue istex hal-05556729v1

Structural Characterization of a Novel Neuropeptide from the Central Nervous System of the Leech Erpobdella octoculata

Michel Salzet , Phillipe Bulet , Wolf-Michael Weber , Wolfgang Clauss , Martine Verger-Bocquet et al.

Journal of Biological Chemistry, 1996, 271 (12), pp.7237-7243. ⟨10.1074/jbc.271.12.7237⟩

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Purification, Sequence Analysis, and Cellular Localization of a Prodynorphin-derived Peptide Related to the α-Neo-endorphin in the Rhynchobdellid Leech Theromyzon tessulatum

Michel Salzet , Martine Verger-Bocquet , Philippe Bulet , Jean-Claude Beauvillain , Jean Malecha

Journal of Biological Chemistry, 1996, 271 (22), pp.13191-13196. ⟨10.1074/jbc.271.22.13191⟩

Article dans une revue hal-03828967v1

Structural characterization of osmoregulator peptides from the brain of the leech Theromyzon tessulatum: IPEPYVWD and IPEPYVWD-amide

Michel Salzet , Franck Vandenbulcke , Martine Verger-Bocquet

Molecular Brain Research, 1996, 43 (1-2), pp.301-310. ⟨10.1016/s0169-328x(96)00185-4⟩

Article dans une revue istex hal-05556716v1

Structural Characterization of a Diuretic Peptide from the Central Nervous System of the Leech Erpobdella octoculata

Michel Salzet , Philippe Bulet , Christian Wattez , Martine Verger-Bocquet , Jean Malecha

Journal of Biological Chemistry, 1995, 270 (4), pp.1575-1582. ⟨10.1074/jbc.270.4.1575⟩

Article dans une revue hal-03828963v1

A comparison of the leech Theromyzon tessulatum angiotensin I-like molecule with forms of vertebrate angiotensinogens: a hormonal system conserved in the course of evolution

Virginie Laurent , Philippe Bulet , Michel Salzet

Neuroscience Letters, 1995, 190 (3), pp.175-178. ⟨10.1016/0304-3940(95)11533-3⟩

Article dans une revue istex hal-03828991v1

Isolation and structural characterization of enkephalins in the brain of the Rhynchobdellid leech Theromyzon tessulatum

Michel Salzet , Philippe Bulet , Martine Verger-Bocquet , Jean Malecha

FEBS Letters, 1995, 357 (2), pp.187-191. ⟨10.1016/0014-5793(94)01358-8⟩

Article dans une revue hal-03828985v1

Isolation and structural characterization of a novel peptide related to γ-melanocyte stimulating hormone from the brain of the leech Theromyzon tessulatum

Michel Salzet , Christian Wattez , Philippe Bulet , Jean Malecha

FEBS Letters, 1994, 348 (1), pp.102-106. ⟨10.1016/0014-5793(94)00581-8⟩

Article dans une revue hal-03828971v1

FMRFamide-related peptides in the sex segmental ganglia of the Pharyngobdellid leech Erpobdella octoculata. Identification and involvement in the control of hydric balance

Michel Salzet , Philippe Bulet , Christian Wattez , Jean Malecha

European Journal of Biochemistry, 1994, 221 (1), pp.269-275. ⟨10.1111/j.1432-1033.1994.tb18738.x⟩

Article dans une revue hal-03828996v1

Isolation, structural characterization and biological function of a lysine-conopressin in the central nervous system of the Pharyngobdellid leech Erpobdella octoculata

Michel Salzet , Philippe Bulet , Alain Dorsselaer , Jean Malecha

European Journal of Biochemistry, 1993, 217 (3), pp.897-903. ⟨10.1111/j.1432-1033.1993.tb18319.x⟩

Article dans une revue hal-03828937v1

The Colibactin-Producing Escherichia coli alters the tumor microenvironment to immunosuppressive lipid overload facilitating colorectal cancer progression and chemoresistance.

Nilmara de Oliveira Alves , Guillaume Dalmasso , Darja Nikitina , Amaury Vaysse , Richard Ruez et al.

41 ème CECED, Mar 2024, Monptellier, France

Communication dans un congrès hal-04543437v1

Abstract P3-08-15: Proteomic profile of PAM50 intermediate risk early breast cancers

N Hajjaji , S Aboulouard , Ym Robin , D Bertin , I Fournier et al.

Abstracts: 2018 San Antonio Breast Cancer Symposium; December 4-8, 2018; San Antonio, Texas, Sep 2019, Paris, France. pp.P3-08-15-P3-08-15, ⟨10.1158/1538-7445.SABCS18-P3-08-15⟩

Communication dans un congrès inserm-02941557v1

Abstract P3-08-19: Proteomic tracking of breast cancer metastasis progression

N Hajjaji , S Aboulouard , Ym Robin , D Bertin , I Fournier et al.

Abstracts: 2018 San Antonio Breast Cancer Symposium; December 4-8, 2018; San Antonio, Texas, Aug 2019, Paris, France. pp.P3-08-19, ⟨10.1158/1538-7445.SABCS18-P3-08-19⟩

Communication dans un congrès inserm-02941553v1

Abstract 367: Trop-2 activates a dormant Na + /K + -ATPase/PKCα/CD9/ezrin signaling axis to override the basal growth program of cancer cells

Marco Trerotola , Valeria Relli , Romina Tripaldi , Andrea Sacchetti , Kristina Havas et al.

Proceedings: AACR Annual Meeting 2017; April 1-5, 2017; Washington, DC, Jul 2017, Paris, France. pp.367-367, ⟨10.1158/1538-7445.AM2017-367⟩

Communication dans un congrès inserm-02940617v1
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Enhanced spatial resolution of MALDI images using silicon masks

Nicolas Verplanck , Maxence Wisztorski , Jonathan Stauber , J.C. Camart , Michel Salzet et al.

11th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2007, 2007, Paris, France. pp.41-43

Communication dans un congrès hal-00284454v1

Développement de nouveaux dispositifs microfluidiques (BioMEMS) adaptés à la mesure dynamique du NO libéré par une chaine nerveuse de sangsue après lésion

Abdennour Abbas , Damien Debuisson , Thomas Dargent , Vincent Senez , Michel Salzet et al.

Forum annuel du Club NO France, 2006, Paris, France

Communication dans un congrès hal-00130884v1

MALDI imaging by using solid ionic matrixes for direct analysis of tissues.

Jean-Claude Tabet , Rémy Lemaire , P. Ducoroy , J.B Hendra , A. Desmons et al.

3rd International Conference “Genomics, Proteomics, Bioinformatics, and Nanotechnologies for Medicine”, Jul 2006, NOVOSIBIRSK, Russia

Communication dans un congrès hal-00104882v1

Ambient Mass Spectrometry Imaging by Water-Assisted Laser Desorption/Ionization for Ex Vivo and in Vivo Applications.

Nina Ogrinc , Paul Chaillou , Alexandre Kruszewski , Christian Duriez , Michel Salzet et al.

Methods in Molecular Biology, 2688, Springer, pp.83-94, 2023, ⟨10.1007/978-1-0716-3319-9_8⟩

Chapitre d'ouvrage hal-04400799v1

MALDI Mass Spectrometry Imaging and Spatially-resolved Proteomics

E. Chicano-Galvez , Michel Salzet , Isabelle Fournier , E Chicano-Galvez

MALDI Mass Spectrometry Imaging: From Fundamentals to Spatial Omics, Royal Society of Chemistry, 2021, 978-1-83916-241-1. ⟨10.1039/9781839165191⟩

Chapitre d'ouvrage hal-04552159v1

Combined MALDI Mass Spectrometry Imaging and Parafilm-Assisted Microdissection-Based LC-MS/MS Workflows in the Study of the Brain

Jusal Quanico , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier

Combined MALDI Mass Spectrometry Imaging and Parafilm-Assisted Microdissection-Based LC-MS/MS Workflows in the Study of the Brain, 1598, pp.269-283, 2017, ⟨10.1007/978-1-4939-6952-4_13⟩

Chapitre d'ouvrage inserm-02940633v1

Droplet-Based Liquid Extraction for Spatially-Resolved Microproteomics Analysis of Tissue Sections

Maxence Wisztorski , Jusal Quanico , Julien Franck , Benoit Fatou , Michel Salzet et al.

Droplet-Based Liquid Extraction for Spatially-Resolved Microproteomics Analysis of Tissue Sections, pp.49-63, 2017, ⟨10.1007/978-1-4939-7051-3_6⟩

Chapitre d'ouvrage inserm-02940613v1

Progress and Potential of Imaging Mass Spectrometry Applied to Biomarker Discovery

Jusal Quanico , Julien Franck , Maxence Wisztorski , Michel Salzet , Isabelle Fournier

Progress and potential of imaging mass spectrometry applied to biomarker discovery, pp.21-43, 2017, ⟨10.1007/978-1-4939-6952-4_2⟩

Chapitre d'ouvrage inserm-02940629v1