
Miguel de Navascués
I work on statistical methods for the inference of evolutionary processes (genetic drift, gene flow, selection) from population genetic data.
62%
Open access
98
Documents
Current affiliation
- Centre de Biologie pour la Gestion des Populations (UMR CBGP)
Researcher identifiers
Website
Presentation
I am a permanent researcher (Chargé de Recherche INRAE) at the CBGP (Centre de Biologie pour la Gestion des Populations) at Montpellier. I work on the development and evaluation of statistical approaches for the analysis of population genetic data for the inference of evolutionary processes (genetic drift, gene flow, selection). Currently I am focused on simulation-based approaches for the simultaneous inference of demography and selection from temporal data, such as ancient DNA+modern DNA, monitored populations, "resurrection" experiments or evolve+re-sequence experiments.
Research domain
Life Sciences [q-bio]
Biodiversity
Populations and Evolution [q-bio.PE]
Publications
Publications
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Joint inference of adaptive and demographic history from temporal population genomic dataApproche Interdisciplinaire de l'Evolution Moléculaire, Nov 2019, Toulouse, France
Conference papers
hal-02790079
v1
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Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationALPHY 2019: Bioinformatics and Evolutionary Genomics, Feb 2019, Paris, France
Conference papers
hal-02788596
v1
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Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationMathematical and Computational Evolutionary Biology, May 2019, Porquerolles, France
Conference papers
hal-02787319
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Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationPopGroup Meeting 52, Jan 2019, Oxford, United Kingdom
Conference papers
hal-02787320
v1
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Tracking selection in time-series population genomic data using ABC random forestsMathematical and Computational Evolutionary Biology, May 2018, Saint Martin de Londres, France
Conference papers
hal-02785697
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Tracking selection in time-series population genomic data using ABC random forestsJournée scientifique Inter LabEx - « Adaptation des organismes à l’environnement », Feb 2018, Motnpellier, France
Conference papers
hal-02785695
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Diversity and genetic structure in selfing populations in the absence of selection9. Models in Ecology and Evolution, May 2018, Montpellier, France
Conference papers
hal-02785294
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Tracking selection in time-series population genomic data using ABC random forests2. Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France
Conference papers
hal-02785503
v1
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Temporal study of diversity in selfing plants38. Réunion du Groupe d'Étude de Biologie et Génétique des Populations. Petit pois déridés 2017, Institut Diversité Ecologie et Evolution du Vivant (IDEEV). Paris, FRA., Jun 2017, Orsay, France
Conference papers
hal-02788128
v1
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Temporal study of diversity in selfing plantsJournées des jeunes chercheurs du département Biologie et Amélioration des Plantes de l'INRA, Institut National de Recherche Agronomique (INRA). UAR Département Biologie et Amélioration des Plantes (0459)., Apr 2017, Bordeaux, France
Conference papers
hal-02789025
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Ecological genetics and adaptation in European yew (Taxus baccata L.)Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Conference papers
hal-02741608
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Tracking adaptation to environmental changes: selfing and detection of loci under selectionEmpirisme et Théorie en Écologie et Évolution, Sep 2015, Gif-sur-Yvette, France
Conference papers
hal-02792415
v1
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Limites des genome-scans pour la détection de locus sous sélection chez les espèces autogamesJournées ARCAD, Oct 2014, Montpellier, France
Conference papers
hal-02794123
v1
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Population genetics of Spectacled Warbler, Sylvia conspicillata9th Conference of the European Ornithologists's Union, Aug 2013, Norwich, United Kingdom
Conference papers
hal-02747155
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Inférence démographique utilisant des “skyline plots” avec le calcul bayésien approché34. Réunion annuelle du Groupe d’Etude de Biologie et Génétique des Populations (Petit Pois Déridé 2012), Aug 2012, Avignon, France
Conference papers
hal-02745827
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Genetic diversity and fitness in gametophytic self-incompatible and asexual populations : theoretical approach and experimental observations in Prunus avium L.Green plant breeding technologies. International conference, Feb 2010, Vienne, Austria. 1 p
Conference papers
hal-02811680
v1
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Distinguishing shared ancestral polymorphism from recent introgression in genes with recombinationRéunion 2008 du GDR 1928 Génomique des populations et génomique évolutive, GDR 1928 Génomique des populations et génomique évolutive., Oct 2008, Sète, France
Conference papers
hal-02814597
v1
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A new composite likelihood method to characterize demographic expansions: preliminary results from Y-chromosome STR dataDNA in Forensics, Università Politecnica delle Marche, May 2008, Ancona, Italy
Conference papers
hal-02755469
v1
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Characterization of demographic expansions from linked microsatellite dataCUSO workshop Estimating Demographic Parameters from Genetic Data, Jun 2007, La Fouly, Switzerland
Conference papers
hal-02814600
v1
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The role of clonality in the maintenance of self-incompatibility2ème Journées EvoSud, Nov 2007, Orsay, France
Conference papers
hal-02814599
v1
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High substitution rate estimates from temporally sampled sequences: are they biased or biologically meaningful?Annual Meeting of the Society for Molecular Biology and Evolution, Jun 2007, Halifax, Canada
Conference papers
hal-02751473
v1
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Coalescent simulations for the evaluation of statistical tools for demographic inference and the effect of homoplasy in chloroplast microsatellitesPopulation Genetics and Genomics of Forest Trees: from Gene Funcyion to Evolutionary Dynamics and Conservation, IUFRO, Oct 2006, Alcalá de Henares, Spain
Conference papers
hal-02751238
v1
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Diversidad y flujo genético en plantaciones de Pinus canariensisIV Jornadas Forestales de la Macaronesia, Jun 2006, Breña Baja, La Palma, España
Conference papers
hal-00255828
v1
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Age of alleles: how ancestral are aDNA sequences?New Tools for Biodiversity Conservation Through the Advancement of Phylogeographic Methodologies, ESF/LESC Exploratory Workshop, Jul 2006, Norwich, United Kingdom
Conference papers
hal-02814083
v1
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Estudio biogeográfico y demográfico del pino canario mediante marcadores molecularesXIII Workshop Avances en Biología Molecular por Jóvenes Investigadores en el Extranjero, Dec 2005, Madrid, España
Conference papers
hal-02827237
v1
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Estudio de la variabilidad genética de repoblaciones de Quercus ilex subsp. ballota en AndalucíaLibro de Resúmenes, Conferencias y Ponencias del IV Congreso Forestal Español, Sociedad Española de Ciencias Forestales, 2005, Zaragoza, España
Conference papers
hal-02828959
v1
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Can flowering time produce isolation by altitude in the Canary Island pine?IOPB Meeting, Plant Evolution in Mediterranean Climate Zones, May 2004, Valencia, Spain
Conference papers
hal-02763094
v1
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Genetic diversity in the Canary Island pine treeBio-Colloquium 2004, 2004, Norwich, United Kingdom
Conference papers
hal-02827238
v1
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Performance evaluation of adaptive introgression classification methodsMCEB 2024 : Mathematical and computational Evolutionary biology 2024, Jun 2024, St Martin de Londres, France
Conference poster
hal-04713611
v1
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Joint inference of demography and selection from temporal population genomic data via approximate Bayesian computationCold Spring Harbor meeting: Probabilistic Modeling in Genomics (Virtual), Apr 2021, Virtual, United States. ⟨10.6084/m9.figshare.23943312⟩
Conference poster
hal-04179269
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Joint inference of effective population size and genetic load from temporal population genomic dataAncient Biomolecules of Plants, Animals, and Microbes 2021, Mar 2021, Virtual, United Kingdom. ⟨10.6084/m9.figshare.23943828⟩
Conference poster
hal-03189306
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Detection of loci under selection from temporal population genomic data through ABC random forest7. journées scientifiques du LabEx NUMEV, Nov 2018, Montpellier, France. , 2018
Conference poster
hal-02787307
v1
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Temporal FST genome scans: the case of partially selfing populationsSex uncovered: the evolutionary biology of reproductive systems, Apr 2018, Roscoff, France. 1 p., 2018, ⟨10.6084/m9.figshare.13010312.v1⟩
Conference poster
hal-02786307
v1
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Diversity and genetic structure in selfing populations in the absence of selectionSex uncovered: the evolutionary biology of reproductive systems, Apr 2018, Roscoff, France. 1 p., 2018
Conference poster
hal-02786964
v1
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Genetic structure and temporal dynamics of selfing populations under neutral processes2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. 2018
Conference poster
hal-02787384
v1
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Temporal FST genome scans: the case of partially selfing populations2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. 2018
Conference poster
hal-02786861
v1
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Tracking adaptation in selfing plant populationsConférence Jacques Monod "Coalescence des approches théoriques et expérimentales en génomique évolutive et biologie des systèmes", Apr 2016, Roscoff, France. , 2016
Conference poster
hal-02801759
v1
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Seed collections to study plant evolutionAnnual meeting of the Society for Molecular Biology and Evolution : SMBE meeting, Jul 2015, Vienne, Austria. , 2015
Conference poster
hal-02795320
v1
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Tracking adaptation to environmental changes: selfing and detection of loci under selection15. Congress of the European Society for Evolutionary Biology (ESEB 2015), Aug 2015, Lausanne, Switzerland. , 2015, 15th Congress of the European Society for Evolutionary Biology: Abstracts
Conference poster
hal-02740162
v1
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Detection of locus under selection from temporal samples of partial-selfing populationsSMBE Satellite meeting SMBEBA 2015. Investigating biological adaptation with NGS: data and models, May 2015, Saint Martin de Londres, France. 2015
Conference poster
hal-02797018
v1
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Demographic inference using skyline plots on approximate bayesian computationAnnual Meeting of the Society for Molecular biology et Evolution, Jun 2012, Dublin, Ireland. 2012, Posters abstracts
Conference poster
hal-01267944
v1
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Mutation rate estimates for 110 Y-chromosome STRs combining population and father-son pair dataAnnual Meeting of the SMBE 2010, 2010, Lyon, France. 2010
Conference poster
hal-02751488
v1
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Etude d’un système de reproduction combinant auto-incompatibilité gamétophytique et asexualitéEcologie 2010, Sep 2010, Montpellier, France. 251 p., 2010, Proceedings of Ecologie 2010, Colloque national d’écologie scientifique
Conference poster
hal-02757819
v1
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Distinguishing recent introgression from ancestral polymorphism as the origin of shared polymorphisms and application on the Drosophila simulans species complexAnnual Meeting of the SMBE 2009, 2009, Iowa City, United States. 2009
Conference poster
hal-02752837
v1
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Discrimination between ancestral polymorphism and recent introgression as causes of shared polymorphic sites between speciesSMBE 2008, 2008, Barcelona, Spain. 2008
Conference poster
hal-02751475
v1
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Demographic expansions in conifer and human populations characterized by linked microsatellite dataAnnual Meeting of the Society for Molecular Biology and Evolution, Jun 2008, Barcelona, Spain. 2008
Conference poster
hal-02755475
v1
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Evolution of inbreeding depression in species combining self-incompatibility and partial asexual reproduction11. Congress of the European Society of Evolutionary Biology (ESEB), Aug 2007, Uppsala, Sweden. 2007
Conference poster
hal-02755474
v1
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Characterization of historical demographic expansions from linked microsatellite dataJacques Monod Conference "Evolutionary Genomics", May 2007, Roscoff, France. 2007
Conference poster
hal-02754333
v1
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Evaluation of the power of assignment methods on chloroplast microsatellites for provenance identification of reforested standsPopulation Genetics and Genomics of Forest Trees: from Gene Function to Evolutionary Dynamics and Conservation, Oct 2006, Alcalá de Henares, Spain. 2006
Conference poster
hal-02755472
v1
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Diversidad y flujo genético en plantaciones de Pinus canariensis4. Jornadas Forestales de la Macaronesia. Congreso de los Recursos Forestales en la Macaronesia, Jun 2006, Breña Baja (La Palma), España. 2006
Conference poster
hal-02755419
v1
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Chloroplast microsatellite evolution in conifers: measures of genetic diversity and the effects of homoplasyESEBIX, Aug 2003, Leeds, United Kingdom
Conference poster
hal-03153955
v1
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SelNeTime: a python package inferring effective population size and selection intensity from genomic time series data2024
Preprints, Working Papers, ...
hal-04784414
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Retracing the center of origin and evolutionary history of nutmeg Myristica fragrans, an emblematic spice tree species2023
Preprints, Working Papers, ...
(Preprint)
hal-04179798
v1
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Exploring eco-evolutionary scenarios of brown trout (Salmo trutta) colonization in the Kerguelen Islandgrowth rate, INRAE. 2025
Reports
(Research report)
hal-04992902
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Genetic Diversity of the Endemic Canary Island Pine Tree, Pinus canariensisEcology, environment. University of East Anglia, Norwich, 2005. English. ⟨NNT : ⟩
Theses
tel-00250082
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Inférences en Génétique des PopulationsMaster. Montpellier, France. 2024, pp.98
Lectures
hal-04832793
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Archaeogenetics2021
Videos
hal-03153250
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Cycle de la grande douve du foie (<em>Fasciola hepatica</em>)2016
Videos
hal-02801372
v1
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