Miguel de Navascués
- Centre de Biologie pour la Gestion des Populations (UMR CBGP)
Présentation
I am a permanent researcher (Chargé de Recherche INRAE) at the CBGP (Centre de Biologie pour la Gestion des Populations) at Montpellier. I work on the development and evaluation of statistical approaches for the analysis of population genetic data for the inference of evolutionary processes (genetic drift, gene flow, selection). Currently I am focused on simulation-based approaches for the simultaneous inference of demography and selection from temporal data, such as ancient DNA+modern DNA, monitored populations, "resurrection" experiments or evolve+re-sequence experiments.
Domaines de recherche
Publications
Publications
Interplay between low-recombining regions and overdominance in a plant genome?Congress of the European Society for Evolutionary Biology (ESEB 2025), Sociedad Española de Biología Evolutiva, Aug 2025, Barcelona, Spain |
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Inferring demography and selection from genomic time series dataWebinaire TIMe-ID, Jun 2025, Online, France |
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SelNeTime : a new method inferring demography and selection from genomic time series dataMCEB 2024 : Mathematical and computational Evolutionary biology 2024, Jun 2024, Montpellier, France |
Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationALPHY 2019: Bioinformatics and Evolutionary Genomics, Feb 2019, Paris, France |
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Joint inference of adaptive and demographic history from temporal population genomic dataApproche Interdisciplinaire de l'Evolution Moléculaire, Nov 2019, Toulouse, France |
Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationMathematical and Computational Evolutionary Biology, May 2019, Porquerolles, France |
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Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationPopGroup Meeting 52, Jan 2019, Oxford, United Kingdom |
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Tracking selection in time-series population genomic data using ABC random forests2. Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France |
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Tracking selection in time-series population genomic data using ABC random forestsJournée scientifique Inter LabEx - « Adaptation des organismes à l’environnement », Feb 2018, Montpellier, France |
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Tracking selection in time-series population genomic data using ABC random forestsMathematical and Computational Evolutionary Biology, Jun 2018, Saint Martin de Londres, France |
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Diversity and genetic structure in selfing populations in the absence of selection9. Models in Ecology and Evolution, May 2018, Montpellier, France |
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Temporal study of diversity in selfing plantsJournées des jeunes chercheurs du département Biologie et Amélioration des Plantes de l'INRA, Institut National de Recherche Agronomique (INRA). UAR Département Biologie et Amélioration des Plantes (0459)., Apr 2017, Bordeaux, France |
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Temporal study of diversity in selfing plants38. Réunion du Groupe d'Étude de Biologie et Génétique des Populations. Petit pois déridés 2017, Institut Diversité Ecologie et Evolution du Vivant (IDEEV). Paris, FRA., Jun 2017, Orsay, France |
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Ecological genetics and adaptation in European yew (Taxus baccata L.)Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p |
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Tracking adaptation to environmental changes: selfing and detection of loci under selectionEmpirisme et Théorie en Écologie et Évolution, Sep 2015, Gif-sur-Yvette, France |
Limites des genome-scans pour la détection de locus sous sélection chez les espèces autogamesJournées ARCAD, Oct 2014, Montpellier, France |
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Population genetics of Spectacled Warbler, Sylvia conspicillata9th Conference of the European Ornithologists's Union, Aug 2013, Norwich, United Kingdom |
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Inférence démographique utilisant des “skyline plots” avec le calcul bayésien approché34. Réunion annuelle du Groupe d’Etude de Biologie et Génétique des Populations (Petit Pois Déridé 2012), Aug 2012, Avignon, France |
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Genetic diversity and fitness in gametophytic self-incompatible and asexual populations : theoretical approach and experimental observations in Prunus avium L.Green plant breeding technologies. International conference, Feb 2010, Vienne, Austria. 1 p |
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Distinguishing shared ancestral polymorphism from recent introgression in genes with recombinationRéunion 2008 du GDR 1928 Génomique des populations et génomique évolutive, GDR 1928 Génomique des populations et génomique évolutive., Oct 2008, Sète, France |
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A new composite likelihood method to characterize demographic expansions: preliminary results from Y-chromosome STR dataDNA in Forensics, Università Politecnica delle Marche, May 2008, Ancona, Italy |
The role of clonality in the maintenance of self-incompatibility2ème Journées EvoSud, Nov 2007, Orsay, France |
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Characterization of demographic expansions from linked microsatellite dataCUSO workshop Estimating Demographic Parameters from Genetic Data, Jun 2007, La Fouly, Switzerland |
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High substitution rate estimates from temporally sampled sequences: are they biased or biologically meaningful?Annual Meeting of the Society for Molecular Biology and Evolution, Jun 2007, Halifax, Canada |
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Age of alleles: how ancestral are aDNA sequences?New Tools for Biodiversity Conservation Through the Advancement of Phylogeographic Methodologies, ESF/LESC Exploratory Workshop, Jul 2006, Norwich, United Kingdom |
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Coalescent simulations for the evaluation of statistical tools for demographic inference and the effect of homoplasy in chloroplast microsatellitesPopulation Genetics and Genomics of Forest Trees: from Gene Funcyion to Evolutionary Dynamics and Conservation, IUFRO, Oct 2006, Alcalá de Henares, Spain |
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Diversidad y flujo genético en plantaciones de Pinus canariensisIV Jornadas Forestales de la Macaronesia, Jun 2006, Breña Baja, La Palma, España |
Estudio de la variabilidad genética de repoblaciones de Quercus ilex subsp. ballota en AndalucíaLibro de Resúmenes, Conferencias y Ponencias del IV Congreso Forestal Español, Sociedad Española de Ciencias Forestales, 2005, Zaragoza, España |
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Estudio biogeográfico y demográfico del pino canario mediante marcadores molecularesXIII Workshop Avances en Biología Molecular por Jóvenes Investigadores en el Extranjero, Dec 2005, Madrid, España |
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Can flowering time produce isolation by altitude in the Canary Island pine?IOPB Meeting, Plant Evolution in Mediterranean Climate Zones, May 2004, Valencia, Spain |
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Genetic diversity in the Canary Island pine treeBio-Colloquium 2004, 2004, Norwich, United Kingdom |
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Infer selection and demography from genomic time seriesSéminaire des doctorants du département de Génétique Animale de l'INRAE, May 2025, Bordeaux, France |
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Selnetime: A new method inferring demography and selection from genomic time series dataConservation genomics Paris 2024 (conservgenomics), Jun 2024, Paris, France. |
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Performance evaluation of adaptive introgression classification methodsMCEB 2024 : Mathematical and computational Evolutionary biology 2024, Jun 2024, St Martin de Londres, France |
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Joint inference of demography and selection from temporal population genomic data via approximate Bayesian computationCold Spring Harbor meeting: Probabilistic Modeling in Genomics (Virtual), Apr 2021, Virtual, United States. ⟨10.6084/m9.figshare.23943312⟩ |
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Joint inference of effective population size and genetic load from temporal population genomic dataAncient Biomolecules of Plants, Animals, and Microbes 2021, Mar 2021, Virtual, United Kingdom. ⟨10.6084/m9.figshare.23943828⟩ |
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Temporal FST genome scans: the case of partially selfing populations2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. 2018 |
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Temporal FST genome scans: the case of partially selfing populationsSex uncovered: the evolutionary biology of reproductive systems, Apr 2018, Roscoff, France. 1 p., 2018, ⟨10.6084/m9.figshare.13010312.v1⟩ |
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Detection of loci under selection from temporal population genomic data through ABC random forest7. journées scientifiques du LabEx NUMEV, Nov 2018, Montpellier, France. , 2018 |
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Diversity and genetic structure in selfing populations in the absence of selectionSex uncovered: the evolutionary biology of reproductive systems, Apr 2018, Roscoff, France. 1 p., 2018 |
Genetic structure and temporal dynamics of selfing populations under neutral processes2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. 2018 |
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Tracking adaptation in selfing plant populationsConférence Jacques Monod "Coalescence des approches théoriques et expérimentales en génomique évolutive et biologie des systèmes", Apr 2016, Roscoff, France. , 2016 |
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Seed collections to study plant evolutionAnnual meeting of the Society for Molecular Biology and Evolution : SMBE meeting, Jul 2015, Vienne, Austria. , 2015 |
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Detection of locus under selection from temporal samples of partial-selfing populationsSMBE Satellite meeting SMBEBA 2015. Investigating biological adaptation with NGS: data and models, May 2015, Saint Martin de Londres, France. 2015 |
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Tracking adaptation to environmental changes: selfing and detection of loci under selection15. Congress of the European Society for Evolutionary Biology (ESEB 2015), Aug 2015, Lausanne, Switzerland. , 2015, 15th Congress of the European Society for Evolutionary Biology: Abstracts |
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Demographic inference using skyline plots on approximate bayesian computationAnnual Meeting of the Society for Molecular biology et Evolution, Jun 2012, Dublin, Ireland. 2012, Posters abstracts |
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Etude d’un système de reproduction combinant auto-incompatibilité gamétophytique et asexualitéEcologie 2010, Sep 2010, Montpellier, France. 251 p., 2010, Proceedings of Ecologie 2010, Colloque national d’écologie scientifique |
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Mutation rate estimates for 110 Y-chromosome STRs combining population and father-son pair dataAnnual Meeting of the SMBE 2010, 2010, Lyon, France. 2010 |
Distinguishing recent introgression from ancestral polymorphism as the origin of shared polymorphisms and application on the Drosophila simulans species complexAnnual Meeting of the SMBE 2009, 2009, Iowa City, United States. 2009 |
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Discrimination between ancestral polymorphism and recent introgression as causes of shared polymorphic sites between speciesSMBE 2008, 2008, Barcelona, Spain. 2008 |
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Demographic expansions in conifer and human populations characterized by linked microsatellite dataAnnual Meeting of the Society for Molecular Biology and Evolution, Jun 2008, Barcelona, Spain. 2008 |
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Evolution of inbreeding depression in species combining self-incompatibility and partial asexual reproduction11. Congress of the European Society of Evolutionary Biology (ESEB), Aug 2007, Uppsala, Sweden. 2007 |
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Characterization of historical demographic expansions from linked microsatellite dataJacques Monod Conference "Evolutionary Genomics", May 2007, Roscoff, France. 2007 |
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Evaluation of the power of assignment methods on chloroplast microsatellites for provenance identification of reforested standsPopulation Genetics and Genomics of Forest Trees: from Gene Function to Evolutionary Dynamics and Conservation, Oct 2006, Alcalá de Henares, Spain. 2006 |
Diversidad y flujo genético en plantaciones de Pinus canariensis4. Jornadas Forestales de la Macaronesia. Congreso de los Recursos Forestales en la Macaronesia, Jun 2006, Breña Baja (La Palma), España. 2006 |
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Chloroplast microsatellite evolution in conifers: measures of genetic diversity and the effects of homoplasyESEBIX, Aug 2003, Leeds, United Kingdom |
Exploring eco-evolutionary scenarios of brown trout (Salmo trutta) colonization in the Kerguelen Island2025 |
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SelNeTime: a python package inferring effective population size and selection intensity from genomic time series data2024 |
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Retracing the center of origin and evolutionary history of nutmeg Myristica fragrans, an emblematic spice tree species2023 |
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Genetic Diversity of the Endemic Canary Island Pine Tree, Pinus canariensisEcology, environment. University of East Anglia, Norwich, 2005. English. ⟨NNT : ⟩ |
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Inférences en Génétique des PopulationsMaster. Montpellier, France. 2024, pp.98 |