marc picheral

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Identifying zooplankton fecal pellets from in situ images

Margaux Perhirin , Laure Vilgrain , Geneviève Perrin , Catherine Lalande , Marc Picheral et al.
Journal of Plankton Research, 2025, 47, pp.fbae078. ⟨10.1093/plankt/fbae078⟩
Article dans une revue hal-04994187 v1
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A Lagrangian perspective reveals the carbon and oxygen budget of an oceanic eddy

Alberto Baudena , Rémi Laxenaire , Camille Catalano , Artemis Ioannou , Edouard Leymarie et al.
Communications Earth & Environment, 2025, 6 (1), pp.318. ⟨10.1038/s43247-025-02262-9⟩
Article dans une revue hal-05046172 v1
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First release of the Pelagic Size Structure database: global datasets of marine size spectra obtained from plankton imaging devices

Mathilde Dugenne , Marco Corrales-Ugalde , Jessica Luo , Rainer Kiko , Todd O'Brien et al.
Earth System Science Data, 2024, 16 (6), pp.2971-2999. ⟨10.5194/essd-16-2971-2024⟩
Article dans une revue hal-04648046 v1
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Dynamics of molybdenum and barium in the Bay of Brest (France) explained by phytoplankton community structure and aggregation events

Valentin Siebert , Lukas Fröhlich , Julien Thébault , Bernd R Schöne , Gaspard Delebecq et al.
Estuarine, Coastal and Shelf Science, 2024, 303, pp.108783. ⟨10.1016/j.ecss.2024.108783⟩
Article dans une revue hal-04573051 v1

Quantitative imaging datasets of micro to mesoplankton communities and surface microplastic across the Pacific Ocean from the Tara Pacific Expedition

Zoé Mériguet , Guillaume Bourdin , Nathaniel Kristan , Laetitia Jalabert , Olivier Bun et al.
Hydrology and Earth System Sciences Discussions, 2024, ⟨10.5194/essd-2024-507⟩
Article dans une revue hal-05013552 v1
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Temporal evolution of plankton and particles distribution across a mesoscale front during the spring bloom

Thelma Panaïotis , Antoine Poteau , Émilie Diamond Riquier , Camille Catalano , Lucas Courchet et al.
Limnology and Oceanography, In press, ⟨10.1002/lno.12566⟩
Article dans une revue hal-04653070 v1
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HIPPO environmental monitoring: impact of phytoplankton dynamics on water column chemistry and the sclerochronology of the king scallop ( Pecten maximus ) as a biogenic archive for past primary production reconstructions

Valentin Siebert , Brivaëla Moriceau , Lukas Fröhlich , Bernd Schöne , Erwan Amice et al.
Earth System Science Data, 2023, 15 (7), pp.3263-3281. ⟨10.5194/essd-15-3263-2023⟩
Article dans une revue hal-04186890 v1
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Three major mesoplanktonic communities resolved by in situ imaging in the upper 500 m of the global ocean

Thelma Panaïotis , Marcel Babin , Tristan Biard , François Carlotti , Laurent Coppola et al.
Global Ecology and Biogeography, 2023, 32 (11), pp.1991-2005. ⟨10.1111/geb.13741⟩
Article dans une revue hal-04164166 v2
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Ocean-wide comparisons of mesopelagic planktonic community structures

Janaina Rigonato , Marko Budinich , Alejandro Murillo , Manoela Brandão , Juan Pierella Karlusich et al.
ISME Communications, 2023, 3 (1), pp.83. ⟨10.1038/s43705-023-00279-9⟩
Article dans une revue hal-04184772 v1
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The Green Edge cruise: Understanding the onset, life and fate of the Arctic phytoplankton spring bloom

Flavienne Bruyant , Rémi Amiraux , Marie-Pier Amyot , Philippe Archambault , Lise Artigue et al.
Earth System Science Data, 2022, 14, pp.4607-4642. ⟨10.5194/essd-2022-41⟩
Article dans une revue hal-03782664 v1
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Global Distribution of Zooplankton Biomass Estimated by In Situ Imaging and Machine Learning

Laetitia Drago , Thelma Panaïotis , Jean-Olivier Irisson , Marcel Babin , Tristan Biard et al.
Frontiers in Marine Science, 2022, 9, pp.894372. ⟨10.3389/fmars.2022.894372⟩
Article dans une revue hal-03810062 v1
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Siliceous Rhizaria abundances and diversity in the Mediterranean Sea assessed by combined imaging and metabarcoding approaches

Natalia Llopis Monferrer , Tristan Biard , Miguel Sandin , Fabien Lombard , Marc Picheral et al.
Frontiers in Marine Science, 2022, 9, 14p. :. ⟨10.3389/fmars.2022.895995⟩
Article dans une revue hal-03847226 v1
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Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems

Daniel Richter , Romain Watteaux , Thomas Vannier , Jade Leconte , Paul Frémont et al.
eLife, 2022, 11, pp.e78129. ⟨10.7554/eLife.78129⟩
Article dans une revue hal-02399723 v2
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A global marine particle size distribution dataset obtained with the Underwater Vision Profiler 5

Rainer Kiko , Marc Picheral , David Antoine , Marcel Babin , Léo Berline et al.
Earth System Science Data, 2022, 14 (9), pp.4315-4337. ⟨10.5194/essd-14-4315-2022⟩
Article dans une revue hal-03794258 v1
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Sampling uncertainties of particle size distributions and derived fluxes

Kelsey Bisson , Rainer Kiko , David Siegel , Lionel Guidi , Marc Picheral et al.
Limnology and Oceanography: Methods, 2022, ⟨10.1002/lom3.10524⟩
Article dans une revue hal-03847300 v2
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The Green Edge cruise: investigating the marginal ice zone processes during late spring and early summer to understand the fate of the Arctic phytoplankton bloom

Flavienne Bruyant , Rémi Amiraux , Marie-Pier Amyot , Philippe Archambault , Lise Artigue et al.
Earth System Science Data, 2022, 14, pp.4607-4642. ⟨10.5194/essd-14-4607-2022⟩
Article dans une revue insu-03863335 v1
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The Underwater Vision Profiler 6: an imaging sensor of particle size spectra and plankton, for autonomous and cabled platforms

Marc Picheral , Camille Catalano , Denis Brousseau , Hervé Claustre , Laurent Coppola et al.
Limnology and Oceanography: Methods, 2022, ⟨10.1002/lom3.10475⟩
Article dans une revue hal-03508179 v1
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Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods

Juan José Pierella Karlusich , Eric Pelletier , Fabien Lombard , Madeline Carsique , Etienne Dvorak et al.
Nature Communications, 2021, 12, pp.4160. ⟨10.1038/s41467-021-24299-y⟩
Article dans une revue hal-03334117 v2
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The MALINA oceanographic expedition: how do changesin ice cover, permafrost and UV radiation impactbiodiversity and biogeochemical fluxesin the Arctic Ocean?

Philippe Massicotte , Rainer Amon , David Antoine , Philippe Archambault , Sergio Balzano et al.
Earth System Science Data, 2021, 13, pp.1561-1592. ⟨10.5194/essd-13-1561-2021⟩
Article dans une revue insu-02978433 v3
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Macroscale patterns of oceanic zooplankton composition and size structure

Manoela Brandão , Fabio Benedetti , Séverine Martini , Yawouvi Dodji Soviadan , Jean-Olivier Irisson et al.
Scientific Reports, 2021, 11 (1), pp.15714. ⟨10.1038/s41598-021-94615-5⟩
Article dans une revue hal-03318806 v1
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Trait‐based approach using in situ copepod images reveals contrasting ecological patterns across an Arctic ice melt zone

Laure Vilgrain , Frederic Maps , Marc Picheral , Marcel Babin , Cyril Aubry et al.
Limnology and Oceanography, 2021, 66 (4), pp.1155-1167. ⟨10.1002/lno.11672⟩
Article dans une revue hal-03119903 v1
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Green Edge ice camp campaigns: understanding the processes controlling the under-ice Arctic phytoplankton spring bloom

Philippe Massicotte , Rémi Amiraux , Marie-Pier Amyot , Philippe Archambault , Mathieu Ardyna et al.
Earth System Science Data : Papers in open discussion, 2020, 12 (1), pp.151-176. ⟨10.5194/essd-12-151-2020⟩
Article dans une revue hal-02292721 v1
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Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)

Gabriel Gorsky , Guillaume Bourdin , Fabien Lombard , Maria Luiza Pedrotti , Samuel Audrain et al.
Frontiers in Marine Science, 2019, 6, pp.650. ⟨10.3389/fmars.2019.00750⟩
Article dans une revue hal-02407578 v1
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Marine DNA viral macro- and microdiversity from Pole to Pole

Ann Gregory , Ahmed Zayed , Nádia Conceição-Neto , Ben Temperton , Ben Bolduc et al.
Cell, 2019, 177 (5), pp.1109-1123.e14. ⟨10.1016/j.cell.2019.03.040⟩
Article dans une revue hal-02387010 v1
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The Seasonal and Inter-Annual Fluctuations of Plankton Abundance and Community Structure in a North Atlantic Marine Protected Area

Fabio Benedetti , Laëtitia Jalabert , Marc Sourisseau , Beatriz Becker , Caroline Cailliau et al.
Frontiers in Marine Science, 2019, 6, pp.214. ⟨10.3389/fmars.2019.00214⟩
Article dans une revue hal-02125435 v1
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Global Trends in Marine Plankton Diversity across Kingdoms of Life

Federico Ibarbalz , Nicolas Henry , Manoela Brandão , Severine Martini , Greta Busseni et al.
Cell, 2019, 179 (5), pp.1084-1097.e21. ⟨10.1016/j.cell.2019.10.008⟩
Article dans une revue hal-03094778 v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

Luigi Caputi , Quentin Carradec , Damien Eveillard , Amos Kirilovsky , Eric Pelletier et al.
Global Biogeochemical Cycles, 2019, 33 (3), pp.391-419. ⟨10.1029/2018GB006022⟩
Article dans une revue hal-02999805 v1
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Globally Consistent Quantitative Observations of Planktonic Ecosystems

Fabien Lombard , Emmanuel Boss , Anya M Waite , Meike Vogt , Julia Uitz et al.
Frontiers in Marine Science, 2019, 6, pp.Article 196. ⟨10.3389/fmars.2019.00196⟩
Article dans une revue hal-02325576 v1
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Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Guillem Salazar , Lucas Paoli , Adriana A. Alberti , Jaime Huerta-Cepas , Hans-Joachim Ruscheweyh et al.
Cell, 2019, 179 (5), pp.1068-1083.e21. ⟨10.1016/j.cell.2019.10.014⟩
Article dans une revue hal-02877702 v2
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A global ocean atlas of eukaryotic genes

Quentin Carradec , Eric Pelletier , Corinne da Silva , Adriana A. Alberti , Yoann Seeleuthner et al.
Nature Communications, 2018, 9 (1), pp.373. ⟨10.1038/s41467-017-02342-1⟩
Article dans une revue cea-01874711 v1
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Particulate matter flux interception in oceanic mesoscale eddies by the polychaete Poeobius sp.

Svenja Christiansen , Henk-Jan Hoving , Florian Schütte , Helena Hauss , Johannes Karstensen et al.
Limnology and Oceanography Bulletin, 2018, 63 (5), pp.2093-2109. ⟨10.1002/lno.10926⟩
Article dans une revue hal-01927160 v1
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Longitudinal contrast in turbulence along a ∼ 19° S section in the Pacific and its consequences for biogeochemical fluxes

Pascale Bouruet-Aubertot , Yannis Cuypers , Andrea M. Doglioli , Mathieu Caffin , Christophe Yohia et al.
Biogeosciences, 2018, 15 (24), pp.7485-7504. ⟨10.5194/bg-15-7485-2018⟩
Article dans une revue hal-01978441 v1
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Diazotrophic Trichodesmium impact on UV–Vis radiance and pigment composition in the western tropical South Pacific

Cecile Dupouy , Robert Frouin , Marc Tedetti , Morgane Maillard , Martine Rodier et al.
Biogeosciences, 2018, 15 (16), pp.5249-5269. ⟨10.5194/bg-15-5249-2018⟩
Article dans une revue hal-01864724 v1

ZooScanNet: plankton images captured with the ZooScan

Amanda Elineau , Corinne Desnos , Laetitia Jalabert , Marion Olivier , Jean-Baptiste Romagnan et al.
SEANOE = Sea scientific open data publication, 2018, ⟨10.17882/55741⟩
Article dans une revue (data paper) hal-04670751 v1
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Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria

Théophile Grébert , Hugo Doré , Frédéric Partensky , Gregory Farrant , Emmanuel Boss et al.
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (9), pp.E2010-E2019. ⟨10.1073/pnas.1717069115⟩
Article dans une revue hal-01772758 v1
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Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

Yoann Seeleuthner , Samuel Mondy , Vincent Lombard , Quentin Carradec , Eric Pelletier et al.
Nature Communications, 2018, 9, pp.310. ⟨10.1038/s41467-017-02235-3⟩
Article dans une revue hal-01771839 v1
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Plankton networks driving carbon export in the oligotrophic ocean

Lionel Guidi , Samuel Chaffron , Lucie Bittner , Damien Eveillard , Abdelhalim Larhlimi et al.
Nature, 2016, 532, pp.465-470. ⟨10.1038/nature16942⟩
Article dans une revue hal-01275276 v1
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The wineglass effect shapes particle export to the deep ocean in mesoscale eddies

Anya M. Waite , Lars Stemmann , Lionel Guidi , Paulo H. R. Calil , Andrew Mc C. Hogg et al.
Geophysical Research Letters, 2016, 43 (18), pp.9791-9800. ⟨10.1002/2015GL066463⟩
Article dans une revue hal-03502974 v1
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Imperfect automatic image classification successfully describes plankton distribution patterns

Robin Faillettaz , Marc Picheral , Jessica Y. Luo , Cédric Guigand , Robert K. Cowen et al.
Methods in Oceanography, 2016, ⟨10.1016/j.mio.2016.04.003⟩
Article dans une revue hal-01324904 v1
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Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

Simon Roux , Jennifer R. Brum , Bas E. Dutilh , Shinichi Sunagawa , Melissa B. Duhaime et al.
Nature, 2016, 537 (7622), pp.689-693. ⟨10.1038/nature19366⟩
Article dans une revue hal-01376822 v1
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In situ imaging reveals the biomass of giant protists in the global ocean

Tristan Biard , Lars Stemmann , Marc Picheral , Nicolas Mayot , Pieter Vandromme et al.
Nature, 2016, 532 (7600), pp.504-507. ⟨10.1038/nature17652⟩
Article dans une revue hal-01324873 v1
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Comprehensive Model of Annual Plankton Succession Based on the Whole-Plankton Time Series Approach

Jean-Baptiste Romagnan , Louis Legendre , Lionel Guidi , Jean-Louis Jamet , Dominique Jamet et al.
PLoS ONE, 2015, 10 (3), pp.e0119219. ⟨10.1371/journal.pone.0119219⟩
Article dans une revue hal-01225074 v1
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Open science resources for the discovery and analysis of Tara Oceans data

Stéphane Pesant , Fabrice Not , Marc Picheral , Stefanie Kandels-Lewis , Noan Le Bescot et al.
Scientific Data , 2015, 2, pp.150023. ⟨10.1038/sdata.2015.23⟩
Article dans une revue hal-01253984 v1

Environmental characteristics of Agulhas rings affect interocean plankton transport

Emilie Villar , Gregory Farrant , Michael Follows , Laurence Garczarek , Sabrina Speich et al.
Science, 2015, 348 (6237), pp.1261447 - 1261447. ⟨10.1126/science.1261447⟩
Article dans une revue hal-01893637 v1
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Eukaryotic plankton diversity in the sunlit ocean

Noan Le Bescot , Ian Probert , Margaux Carmichael , Julie Poulain , Sarah Romac et al.
Science, 2015, 348 (6237), pp.1261605. ⟨10.1126/science.1261605⟩
Article dans une revue hal-01253979 v1
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Structure and function of the global ocean microbiome

Shinichi Sunagawa , Luis Pedro Coelho , Samuel Chaffron , Jens Roat Kultima , Karine Labadie et al.
Science, 2015, 348 (6237), pp.1261359. ⟨10.1126/science.1261359⟩
Article dans une revue hal-01233742 v1
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Patterns and ecological drivers of ocean viral communities

Jennifer Brum , J Cesar Ignacio-Espinoza , Simon Roux , Guilhem Doulcier , Silvia G. Acinas et al.
Science, 2015, 348 (6237), pp.1261498. ⟨10.1126/science.1261498⟩
Article dans une revue hal-01768331 v1

Determinants of community structure in the global plankton interactome

Gipsi Lima-Mendez , Karoline Faust , Nicolas Henry , Johan Decelle , Sébastien Colin et al.
Science, 2015, 348 (6237), pp.1262073. ⟨10.1126/science.1262073⟩
Article dans une revue hal-01234200 v1

An empirical assessment of the consistency of taxonomic identifications

Philip F. Culverhouse , Norman Macleod , Robert Williams , Mark C. Benfield , Rubens M. Lopes et al.
Marine Biology Research, 2014, 10 (1), pp.73-84. ⟨10.1080/17451000.2013.810762⟩
Article dans une revue hal-03502776 v1
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The characteristics of particulate absorption, scattering and attenuation coefficients in the surface ocean; Contribution of the Tara Oceans expedition

Emmanuel Boss , Marc Picheral , Thomas Leeuw , Alison Chase , Eric Karsenti et al.
Methods in Oceanography, 2013, 7, pp.52-62. ⟨10.1016/j.mio.2013.11.002⟩
Article dans une revue insu-03190095 v1

Mesozooplankton and particulate matter responses to a deep-water frontal system in the southern California Current System

Mark D. Ohman , Jesse R. Powell , Marc Picheral , David W. Jensen
Journal of Plankton Research, 2012, 34 (9), pp.815-827. ⟨10.1093/plankt/fbs028⟩
Article dans une revue hal-03502659 v1

Zooplankton long-term changes in the NW Mediterranean Sea: Decadal periodicity forced by winter hydrographic conditions related to large-scale atmospheric changes?

Carmen Garcia-Comas , Lars Stemmann , Frederic Ibanez , Léo Berline , Maria Grazia Mazzocchi et al.
Journal of Marine Systems, 2011, 87 (3-4), pp.216-226. ⟨10.1016/j.jmarsys.2011.04.003⟩
Article dans une revue istex hal-03502020 v1

Optical imaging of mesopelagic particles indicates deep carbon flux beneath a natural iron-fertilized bloom in the Southern Ocean

Marie-Paule Jouandet , Thomas W. Trull , Lionel Guidi , Marc Picheral , Friederike Ebersbach et al.
Limnology and Oceanography, 2011, 56 (3), pp.1130-1140. ⟨10.4319/lo.2011.56.3.1130⟩
Article dans une revue hal-03502030 v1

Digital zooplankton image analysis using the ZooScan integrated system

Stephane Gasparini , Lars Stemmann , Jean-Baptiste Romagnan , Alison Cawood , Stephane Pesant et al.
Journal of Plankton Research, 2010, 32 (3), pp.285-303. ⟨10.1093/plankt/fbp124⟩
Article dans une revue hal-03502074 v1
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The Underwater Vision Profiler 5: An advanced instrument for high spatial resolution studies of particle size spectra and zooplankton

Marc Picheral , Lionel Guidi , Lars Stemmann , David M. Karl , Ghizlaine Iddaoud et al.
Limnology and Oceanography: Methods, 2010, 8, pp.462-473. ⟨10.4319/lom.2010.8.462⟩
Article dans une revue hal-03502058 v1
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Effects of phytoplankton community on production, size and export of large aggregates: A world-ocean analysis

Lionel Guidi , Lars Stemmann , George A. Jackson , Frederic Ibanez , Hervé Claustre et al.
Limnology and Oceanography, 2009, 54 (6), pp.1951-1963. ⟨10.4319/lo.2009.54.6.1951⟩
Article dans une revue hal-03505004 v1

Global zoogeography of fragile macrozooplankton in the upper 100-1000 m inferred from the underwater video profiler

Lars Stemmann , Marsh Youngbluth , Kevin Robert , Aino Hosia , Marc Picheral et al.
ICES JOURNAL OF MARINE SCIENCE, 2008, 65 (3), pp.433-442. ⟨10.1093/icesjms/fsn010⟩
Article dans une revue hal-03494350 v1

Relationship between particle size distribution and flux in the mesopelagic zone

Lionel Guidi , George A. Jackson , Lars Stemmann , Juan Carlos Miquel , Marc Picheral et al.
Deep Sea Research Part I: Oceanographic Research Papers, 2008, 55 (10), pp.1364-1374. ⟨10.1016/j.dsr.2008.05.014⟩
Article dans une revue istex hal-03494337 v1

Effects of frontal processes on marine aggregate dynamics and fluxes: An interannual study in a permanent geostrophic front (NW Mediterranean)

Lars Stemmann , Louis Prieur , Louis Legendre , Isabelle Taupier-Letage , Marc Picheral et al.
Journal of Marine Systems, 2008, 70 (1-2), pp.1-20. ⟨10.1016/j.jmarsys.2007.02.014⟩
Article dans une revue istex hal-03494353 v1

Vertical distribution of aggregates (> 110 mu m) and mesoscale activity in the northeastern Atlantic: Effects on the deep vertical export of surface carbon

Lionel Guidi , Lars Stemmann , Louis Legendre , Marc Picheral , Louis Prieur et al.
Limnology and Oceanography, 2007, 52 (1), pp.7-18. ⟨10.4319/lo.2007.52.1.0007⟩
Article dans une revue hal-03504960 v1
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Effect of natural iron fertilization on carbon sequestration in the Southern Ocean

Stéphane Blain , Bernard Queguiner , Leanne Armand , Sauveur Belviso , Bruno Bombled et al.
Nature, 2007, 446 (7139), pp.1070-1075. ⟨10.1038/nature05700⟩
Article dans une revue istex hal-00169813 v1

In situ imaging sheds light on particle sinking speeds in the North Atlantic

Manon Laget , Lionel Guidi , marc picheral , Camille Catalano , Tristan Biard
Ocean Science Meeting 2024 - OSM24, American Geophysical Union (AGU); Association for the Sciences of Limnology and Oceanography (ASLO); The Oceanography Society (TOS), Feb 2024, Nouvelle Orléans (Louisiane), United States
Communication dans un congrès hal-04540553 v1

Resolving the scales of plankton ecology and biogeochemical fluxes with the Underwater Vision Profiler

Marc Picheral , Camille Catalano , Alexandre Accardo , Alberto Baudena , Hervé Claustre et al.
ASLO Aquatic Sciences Meeting, 2023, Palma de Mallorca, Spain
Communication dans un congrès hal-04194467 v1

Temporal evolution of particles and plankton distributions across a mesoscale front during the spring bloom

Thelma Panaiotis , Antoine Poteau , Emilie Diamond-Riquier , Lucas Courchet , Solène Motreuil et al.
ASLO Aquatic Sciences Meeting, 2023, Palma de Mallorca, Spain
Communication dans un congrès hal-04194469 v1
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Bioglider: an integrated glider solution for enhancing environmental knowledge

Yves Ponçon , Laurent Mortier , Marc Picheral , Peer Fietzek , Dan Hayes et al.
OCEANS 2023 Gulf Coast conference, IEEE Oceanic engineering society, Sep 2023, Biloxi, United States
Communication dans un congrès hal-04177859 v2

Technologies for Ocean Sensing project developments in imaging and sensing

Kevin Oxborough , Efstathios Papadimitriou , Matthew Patey , Marc Picheral , Fiona Regan et al.
OCEANS 2023, 2023, Limerick, Ireland
Communication dans un congrès hal-04194466 v1

Direct in situ observations of particle flux in the California Current Ecosystem: new perspectives from coupled sediment traps and in situ imaging data

Manon Laget , Catalano Camille , Picheral Marc , Tristan Biard
Ocean Sciences Meeting 2022, American Geophysical Union (AGU); Association for the Sciences of Limnology and Oceanography (ASLO); The Oceanography Society (TOS), Feb 2022, Honolulu & Virtual, United States
Communication dans un congrès hal-04540583 v1

A pipeline for in-situ plankton imaging data: Improving our understanding of ocean particle distribution and carbon fluxes using morphological traits

Miriam Beck , Sakina-Dorothée Ayata , Marc Picheral , Fabien Lombard , Rainer Kiko et al.
SFEcologie 2022, Nov 2022, Metz, France
Communication dans un congrès hal-04026448 v1

EcoTaxa: a tool to support the taxonomic classification of large datasets through supervised machine learning

Jean-Olivier Irisson , Laurent Salinas , Sebastien Colin , Team Complex , Marc Picheral
SFEcologie 2022, 2022, Metz, France
Communication dans un congrès hal-04026447 v1

Benchmark of image classification using several large plankton datasets: Convolutional Neural Networks improve detection of rare taxa

Thelma Panaiotis , Guillaume Boniface-Chang , Gabriel Dulac-Arnold , Benjamin Blanc , Tristan Biard et al.
ASLO 2021 Aquatic Sciences Meeting, Association for the Sciences of Limnology and Oceanography - ASLO, Jun 2021, Online, Unknown Region
Communication dans un congrès hal-04026436 v1

A global marine particle size distribution dataset obtained with the Underwater Vision Profiler 5

Rainer Kiko , Marc Picheral , David Antoine , Marcel Babin , Léo Berline et al.
Aquatic Sciences Meeting, 2021, Online, Unknown Region
Communication dans un congrès hal-04024038 v1

Morphological traits of zooplankton reveal ecological patterns along ice melt dynamics in the Arctic

Laure Vilgrain , Jean-Olivier Irisson , Sakina-Dorothée Ayata , Marc Picheral , Marcel Babin et al.
Ocean Sciences Meeting, 2020, San Diego, California, USA, Unknown Region
Communication dans un congrès hal-04026431 v1

Le deep learning comme extracteur de caractéristiques morphologiques: Application à l’écologie du plancton marin

Jean-Oliver Irisson , Laure Vilgrain , Caroline Cailleton , Marc Picheral , Frederic Maps et al.
Imaginecology, 2020, Online, Unknown Region
Communication dans un congrès hal-04026444 v1

UVP6: a new low power, low cost and deep ocean rated imaging sensor for automatic quantification of particles and plankton from autonomous platforms

Marc Picheral , Emna Abidi , François Berry , Jerome Coindat , Denis Brousseau et al.
Ocean Sciences Meeting, 2020, San Diego, United States
Communication dans un congrès hal-04026430 v1

Imperfect automatic image classification successfully describes plankton distribution patterns

Robin Faillettaz , Marc Picheral , Jessica Y. Luo , Cédric M. Guigand , Robert K. Cowen et al.
Workshop on Machine Learning in Marine Sciences, 2018, Copenhagen, Denmark
Communication dans un congrès hal-04026425 v1

EcoTaxa: A human-computer interface to classify images along a taxonomy with the help of machine-learning

Jean-Olivier Irisson , Simon-Martin Schröder , Marc Picheral
Workshop on Machine Learning in Marine Sciences, 2018, Copenhagen, Denmark
Communication dans un congrès hal-04026424 v1

Quantitative image processing with machine learning: How to turn images into data

Jean-Olivier Irisson , Simon-Martin Schröder , Marc Picheral
Aquatic research models to study regeneration and aging, 2018, Nice, France
Communication dans un congrès hal-04026422 v1

Spatio-temporal variations of the planktonic communities in a North Atlantic Marine Protected Area and their potential links with Sardina pilchardus (Walbaum, 1792) catches

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