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Identifying zooplankton fecal pellets from in situ images
Margaux Perhirin
,
Laure Vilgrain
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Geneviève Perrin
,
Catherine Lalande
,
Marc Picheral
et al.
Article dans une revue
hal-04994187
v1
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A Lagrangian perspective reveals the carbon and oxygen budget of an oceanic eddy
Alberto Baudena
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Rémi Laxenaire
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Camille Catalano
,
Artemis Ioannou
,
Edouard Leymarie
et al.
Article dans une revue
hal-05046172
v1
|
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First release of the Pelagic Size Structure database: global datasets of marine size spectra obtained from plankton imaging devices
Mathilde Dugenne
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Marco Corrales-Ugalde
,
Jessica Luo
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Rainer Kiko
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Todd O'Brien
et al.
Article dans une revue
hal-04648046
v1
|
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Dynamics of molybdenum and barium in the Bay of Brest (France) explained by phytoplankton community structure and aggregation events
Valentin Siebert
,
Lukas Fröhlich
,
Julien Thébault
,
Bernd R Schöne
,
Gaspard Delebecq
et al.
Article dans une revue
hal-04573051
v1
|
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Quantitative imaging datasets of micro to mesoplankton communities and surface microplastic across the Pacific Ocean from the Tara Pacific Expedition
Zoé Mériguet
,
Guillaume Bourdin
,
Nathaniel Kristan
,
Laetitia Jalabert
,
Olivier Bun
et al.
Article dans une revue
hal-05013552
v1
|
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Temporal evolution of plankton and particles distribution across a mesoscale front during the spring bloom
Thelma Panaïotis
,
Antoine Poteau
,
Émilie Diamond Riquier
,
Camille Catalano
,
Lucas Courchet
et al.
Article dans une revue
hal-04653070
v1
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HIPPO environmental monitoring: impact of phytoplankton dynamics on water column chemistry and the sclerochronology of the king scallop ( Pecten maximus ) as a biogenic archive for past primary production reconstructions
Valentin Siebert
,
Brivaëla Moriceau
,
Lukas Fröhlich
,
Bernd Schöne
,
Erwan Amice
et al.
Article dans une revue
hal-04186890
v1
|
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Three major mesoplanktonic communities resolved by in situ imaging in the upper 500 m of the global ocean
Thelma Panaïotis
,
Marcel Babin
,
Tristan Biard
,
François Carlotti
,
Laurent Coppola
et al.
Article dans une revue
hal-04164166
v2
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Ocean-wide comparisons of mesopelagic planktonic community structures
Janaina Rigonato
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Marko Budinich
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Alejandro Murillo
,
Manoela Brandão
,
Juan Pierella Karlusich
et al.
Article dans une revue
hal-04184772
v1
|
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The Green Edge cruise: Understanding the onset, life and fate of the Arctic phytoplankton spring bloom
Flavienne Bruyant
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Rémi Amiraux
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Marie-Pier Amyot
,
Philippe Archambault
,
Lise Artigue
et al.
Article dans une revue
hal-03782664
v1
|
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Global Distribution of Zooplankton Biomass Estimated by In Situ Imaging and Machine Learning
Laetitia Drago
,
Thelma Panaïotis
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Jean-Olivier Irisson
,
Marcel Babin
,
Tristan Biard
et al.
Article dans une revue
hal-03810062
v1
|
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Siliceous Rhizaria abundances and diversity in the Mediterranean Sea assessed by combined imaging and metabarcoding approaches
Natalia Llopis Monferrer
,
Tristan Biard
,
Miguel Sandin
,
Fabien Lombard
,
Marc Picheral
et al.
Article dans une revue
hal-03847226
v1
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Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
Daniel Richter
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Romain Watteaux
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Thomas Vannier
,
Jade Leconte
,
Paul Frémont
et al.
Article dans une revue
hal-02399723
v2
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A global marine particle size distribution dataset obtained with the Underwater Vision Profiler 5
Rainer Kiko
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Marc Picheral
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David Antoine
,
Marcel Babin
,
Léo Berline
et al.
Article dans une revue
hal-03794258
v1
|
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Sampling uncertainties of particle size distributions and derived fluxes
Kelsey Bisson
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Rainer Kiko
,
David Siegel
,
Lionel Guidi
,
Marc Picheral
et al.
Article dans une revue
hal-03847300
v2
|
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The Green Edge cruise: investigating the marginal ice zone processes during late spring and early summer to understand the fate of the Arctic phytoplankton bloom
Flavienne Bruyant
,
Rémi Amiraux
,
Marie-Pier Amyot
,
Philippe Archambault
,
Lise Artigue
et al.
Article dans une revue
insu-03863335
v1
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The Underwater Vision Profiler 6: an imaging sensor of particle size spectra and plankton, for autonomous and cabled platforms
Marc Picheral
,
Camille Catalano
,
Denis Brousseau
,
Hervé Claustre
,
Laurent Coppola
et al.
Article dans une revue
hal-03508179
v1
|
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Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods
Juan José Pierella Karlusich
,
Eric Pelletier
,
Fabien Lombard
,
Madeline Carsique
,
Etienne Dvorak
et al.
Article dans une revue
hal-03334117
v2
|
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The MALINA oceanographic expedition: how do changesin ice cover, permafrost and UV radiation impactbiodiversity and biogeochemical fluxesin the Arctic Ocean?
Philippe Massicotte
,
Rainer Amon
,
David Antoine
,
Philippe Archambault
,
Sergio Balzano
et al.
Article dans une revue
insu-02978433
v3
|
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Macroscale patterns of oceanic zooplankton composition and size structure
Manoela Brandão
,
Fabio Benedetti
,
Séverine Martini
,
Yawouvi Dodji Soviadan
,
Jean-Olivier Irisson
et al.
Article dans une revue
hal-03318806
v1
|
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Trait‐based approach using in situ copepod images reveals contrasting ecological patterns across an Arctic ice melt zone
Laure Vilgrain
,
Frederic Maps
,
Marc Picheral
,
Marcel Babin
,
Cyril Aubry
et al.
Article dans une revue
hal-03119903
v1
|
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Green Edge ice camp campaigns: understanding the processes controlling the under-ice Arctic phytoplankton spring bloom
Philippe Massicotte
,
Rémi Amiraux
,
Marie-Pier Amyot
,
Philippe Archambault
,
Mathieu Ardyna
et al.
Article dans une revue
hal-02292721
v1
|
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Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)
Gabriel Gorsky
,
Guillaume Bourdin
,
Fabien Lombard
,
Maria Luiza Pedrotti
,
Samuel Audrain
et al.
Article dans une revue
hal-02407578
v1
|
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Marine DNA viral macro- and microdiversity from Pole to Pole
Ann Gregory
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Ahmed Zayed
,
Nádia Conceição-Neto
,
Ben Temperton
,
Ben Bolduc
et al.
Article dans une revue
hal-02387010
v1
|
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The Seasonal and Inter-Annual Fluctuations of Plankton Abundance and Community Structure in a North Atlantic Marine Protected Area
Fabio Benedetti
,
Laëtitia Jalabert
,
Marc Sourisseau
,
Beatriz Becker
,
Caroline Cailliau
et al.
Article dans une revue
hal-02125435
v1
|
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Global Trends in Marine Plankton Diversity across Kingdoms of Life
Federico Ibarbalz
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Nicolas Henry
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Manoela Brandão
,
Severine Martini
,
Greta Busseni
et al.
Article dans une revue
hal-03094778
v1
|
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
Luigi Caputi
,
Quentin Carradec
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Damien Eveillard
,
Amos Kirilovsky
,
Eric Pelletier
et al.
Article dans une revue
hal-02999805
v1
|
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Globally Consistent Quantitative Observations of Planktonic Ecosystems
Fabien Lombard
,
Emmanuel Boss
,
Anya M Waite
,
Meike Vogt
,
Julia Uitz
et al.
Article dans une revue
hal-02325576
v1
|
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Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
Guillem Salazar
,
Lucas Paoli
,
Adriana A. Alberti
,
Jaime Huerta-Cepas
,
Hans-Joachim Ruscheweyh
et al.
Article dans une revue
hal-02877702
v2
|
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A global ocean atlas of eukaryotic genes
Quentin Carradec
,
Eric Pelletier
,
Corinne da Silva
,
Adriana A. Alberti
,
Yoann Seeleuthner
et al.
Article dans une revue
cea-01874711
v1
|
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Particulate matter flux interception in oceanic mesoscale eddies by the polychaete Poeobius sp.
Svenja Christiansen
,
Henk-Jan Hoving
,
Florian Schütte
,
Helena Hauss
,
Johannes Karstensen
et al.
Article dans une revue
hal-01927160
v1
|
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Longitudinal contrast in turbulence along a ∼ 19° S section in the Pacific and its consequences for biogeochemical fluxes
Pascale Bouruet-Aubertot
,
Yannis Cuypers
,
Andrea M. Doglioli
,
Mathieu Caffin
,
Christophe Yohia
et al.
Article dans une revue
hal-01978441
v1
|
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Diazotrophic Trichodesmium impact on UV–Vis radiance and pigment composition in the western tropical South Pacific
Cecile Dupouy
,
Robert Frouin
,
Marc Tedetti
,
Morgane Maillard
,
Martine Rodier
et al.
Article dans une revue
hal-01864724
v1
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ZooScanNet: plankton images captured with the ZooScan
Amanda Elineau
,
Corinne Desnos
,
Laetitia Jalabert
,
Marion Olivier
,
Jean-Baptiste Romagnan
et al.
Article dans une revue
(data paper)
hal-04670751
v1
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Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria
Théophile Grébert
,
Hugo Doré
,
Frédéric Partensky
,
Gregory Farrant
,
Emmanuel Boss
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (9), pp.E2010-E2019. ⟨10.1073/pnas.1717069115⟩
Article dans une revue
hal-01772758
v1
|
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Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
Yoann Seeleuthner
,
Samuel Mondy
,
Vincent Lombard
,
Quentin Carradec
,
Eric Pelletier
et al.
Article dans une revue
hal-01771839
v1
|
|
Plankton networks driving carbon export in the oligotrophic ocean
Lionel Guidi
,
Samuel Chaffron
,
Lucie Bittner
,
Damien Eveillard
,
Abdelhalim Larhlimi
et al.
Article dans une revue
hal-01275276
v1
|
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The wineglass effect shapes particle export to the deep ocean in mesoscale eddies
Anya M. Waite
,
Lars Stemmann
,
Lionel Guidi
,
Paulo H. R. Calil
,
Andrew Mc C. Hogg
et al.
Article dans une revue
hal-03502974
v1
|
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Imperfect automatic image classification successfully describes plankton distribution patterns
Robin Faillettaz
,
Marc Picheral
,
Jessica Y. Luo
,
Cédric Guigand
,
Robert K. Cowen
et al.
Article dans une revue
hal-01324904
v1
|
|
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
Simon Roux
,
Jennifer R. Brum
,
Bas E. Dutilh
,
Shinichi Sunagawa
,
Melissa B. Duhaime
et al.
Article dans une revue
hal-01376822
v1
|
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In situ imaging reveals the biomass of giant protists in the global ocean
Tristan Biard
,
Lars Stemmann
,
Marc Picheral
,
Nicolas Mayot
,
Pieter Vandromme
et al.
Article dans une revue
hal-01324873
v1
|
|
Comprehensive Model of Annual Plankton Succession Based on the Whole-Plankton Time Series Approach
Jean-Baptiste Romagnan
,
Louis Legendre
,
Lionel Guidi
,
Jean-Louis Jamet
,
Dominique Jamet
et al.
Article dans une revue
hal-01225074
v1
|
|
Open science resources for the discovery and analysis of Tara Oceans data
Stéphane Pesant
,
Fabrice Not
,
Marc Picheral
,
Stefanie Kandels-Lewis
,
Noan Le Bescot
et al.
Article dans une revue
hal-01253984
v1
|
|
Environmental characteristics of Agulhas rings affect interocean plankton transport
Emilie Villar
,
Gregory Farrant
,
Michael Follows
,
Laurence Garczarek
,
Sabrina Speich
et al.
Article dans une revue
hal-01893637
v1
|
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Eukaryotic plankton diversity in the sunlit ocean
Noan Le Bescot
,
Ian Probert
,
Margaux Carmichael
,
Julie Poulain
,
Sarah Romac
et al.
Article dans une revue
hal-01253979
v1
|
|
Structure and function of the global ocean microbiome
Shinichi Sunagawa
,
Luis Pedro Coelho
,
Samuel Chaffron
,
Jens Roat Kultima
,
Karine Labadie
et al.
Article dans une revue
hal-01233742
v1
|
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Patterns and ecological drivers of ocean viral communities
Jennifer Brum
,
J Cesar Ignacio-Espinoza
,
Simon Roux
,
Guilhem Doulcier
,
Silvia G. Acinas
et al.
Article dans une revue
hal-01768331
v1
|
|
Determinants of community structure in the global plankton interactome
Gipsi Lima-Mendez
,
Karoline Faust
,
Nicolas Henry
,
Johan Decelle
,
Sébastien Colin
et al.
Article dans une revue
hal-01234200
v1
|
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An empirical assessment of the consistency of taxonomic identifications
Philip F. Culverhouse
,
Norman Macleod
,
Robert Williams
,
Mark C. Benfield
,
Rubens M. Lopes
et al.
Article dans une revue
hal-03502776
v1
|
|
The characteristics of particulate absorption, scattering and attenuation coefficients in the surface ocean; Contribution of the Tara Oceans expedition
Emmanuel Boss
,
Marc Picheral
,
Thomas Leeuw
,
Alison Chase
,
Eric Karsenti
et al.
Article dans une revue
insu-03190095
v1
|
|
Mesozooplankton and particulate matter responses to a deep-water frontal system in the southern California Current System
Mark D. Ohman
,
Jesse R. Powell
,
Marc Picheral
,
David W. Jensen
Article dans une revue
hal-03502659
v1
|
|
Zooplankton long-term changes in the NW Mediterranean Sea: Decadal periodicity forced by winter hydrographic conditions related to large-scale atmospheric changes?
Carmen Garcia-Comas
,
Lars Stemmann
,
Frederic Ibanez
,
Léo Berline
,
Maria Grazia Mazzocchi
et al.
Article dans une revue
istex
hal-03502020
v1
|
|
Optical imaging of mesopelagic particles indicates deep carbon flux beneath a natural iron-fertilized bloom in the Southern Ocean
Marie-Paule Jouandet
,
Thomas W. Trull
,
Lionel Guidi
,
Marc Picheral
,
Friederike Ebersbach
et al.
Article dans une revue
hal-03502030
v1
|
|
Digital zooplankton image analysis using the ZooScan integrated system
Stephane Gasparini
,
Lars Stemmann
,
Jean-Baptiste Romagnan
,
Alison Cawood
,
Stephane Pesant
et al.
Article dans une revue
hal-03502074
v1
|
|
The Underwater Vision Profiler 5: An advanced instrument for high spatial resolution studies of particle size spectra and zooplankton
Marc Picheral
,
Lionel Guidi
,
Lars Stemmann
,
David M. Karl
,
Ghizlaine Iddaoud
et al.
Article dans une revue
hal-03502058
v1
|
|
Effects of phytoplankton community on production, size and export of large aggregates: A world-ocean analysis
Lionel Guidi
,
Lars Stemmann
,
George A. Jackson
,
Frederic Ibanez
,
Hervé Claustre
et al.
Article dans une revue
hal-03505004
v1
|
|
Global zoogeography of fragile macrozooplankton in the upper 100-1000 m inferred from the underwater video profiler
Lars Stemmann
,
Marsh Youngbluth
,
Kevin Robert
,
Aino Hosia
,
Marc Picheral
et al.
Article dans une revue
hal-03494350
v1
|
|
Relationship between particle size distribution and flux in the mesopelagic zone
Lionel Guidi
,
George A. Jackson
,
Lars Stemmann
,
Juan Carlos Miquel
,
Marc Picheral
et al.
Article dans une revue
istex
hal-03494337
v1
|
|
Effects of frontal processes on marine aggregate dynamics and fluxes: An interannual study in a permanent geostrophic front (NW Mediterranean)
Lars Stemmann
,
Louis Prieur
,
Louis Legendre
,
Isabelle Taupier-Letage
,
Marc Picheral
et al.
Article dans une revue
istex
hal-03494353
v1
|
|
Vertical distribution of aggregates (> 110 mu m) and mesoscale activity in the northeastern Atlantic: Effects on the deep vertical export of surface carbon
Lionel Guidi
,
Lars Stemmann
,
Louis Legendre
,
Marc Picheral
,
Louis Prieur
et al.
Article dans une revue
hal-03504960
v1
|
|
Effect of natural iron fertilization on carbon sequestration in the Southern Ocean
Stéphane Blain
,
Bernard Queguiner
,
Leanne Armand
,
Sauveur Belviso
,
Bruno Bombled
et al.
Article dans une revue
istex
hal-00169813
v1
|