Nicolas NEGRE

48
Documents

Publications

Publications

Deposit thumbnail

Divergent Selection Promotes Intraspecific Genomic Differentiation in Spodoptera littoralis With Possible Involvement in Detoxification

Karine Durand , Anne Laure Clamens , Bruno Le Ru , Youssef Dewer , Frédérique Hilliou et al.

Ecology and Evolution, 2025, 15 (3), pp.e70917. ⟨10.1002/ece3.70917⟩

Article dans une revue hal-05027917v1
Deposit thumbnail

Nested PCR to optimize rpoB metabarcoding for lowconcentration and host-associated bacterial DNA

Laëtitia Leclerc , Gabryelle Agoutin , Thierry Brévault , Antony Champion , Jean Mainguy et al.

Microbiology Spectrum, 2025, 13 (9), pp.e01417-25. ⟨10.1128/spectrum.01417-25⟩

Article dans une revue hal-05220858v1
Deposit thumbnail

Identification of a viral gene essential for the genome replication of a domesticated endogenous virus in ichneumonid parasitoid wasps

Ange Lorenzi , Fabrice Legeai , Véronique Jouan , Pierre-Alain Girard , Michael R Strand et al.

PLoS Pathogens, 2024, 20 (4), pp.e1011980. ⟨10.1371/journal.ppat.1011980⟩

Article dans une revue hal-04572197v1
Deposit thumbnail

Two host‐plant strains in the fall armyworm

Kiwoong Nam , Nicolas Nègre , Clara Ines Saldamando Benjumea

Insect Science, 2024, 31, pp.1675-1683. ⟨10.1111/1744-7917.13346⟩

Article dans une revue hal-04650941v1
Deposit thumbnail

Early transcriptomic responses of rice leaves to herbivory by Spodoptera frugiperda

Laëtitia Leclerc , Trang Hieu Nguyen , Pénélope Duval , Victoria Mariotti , Anne-Sophie Petitot et al.

Scientific Reports, 2024, 14 (1), pp.2836. ⟨10.1038/s41598-024-53348-x⟩

Article dans une revue hal-04650624v1
Deposit thumbnail

Invasiveness, biology, ecology, and management of the fall armyworm, Spodoptera frugiperda

Marc Kenis , Giovanni Benelli , Antonio Biondi , Paul-André Calatayud , Roger Day et al.

Entomologia Generalis, 2023, 43 (2), pp.187-241. ⟨10.1127/entomologia/2022/1659⟩

Article dans une revue (article de synthèse) hal-03891431v1
Deposit thumbnail

Heterosis effect for larval performance of fall armyworm interstrain hybrids

Laijiao Lan , Nicolas Nègre

Insect Science, 2023, 31 (4), pp.1296-1312. ⟨10.1111/1744-7917.13295⟩

Article dans une revue hal-04345584v1
Deposit thumbnail

H3K9me2 genome-wide distribution in the holocentric insect Spodoptera frugiperda (Lepidoptera: Noctuidae)

Sandra Nhim , Sylvie Gimenez , Rima Nait-Saidi , Dany Severac , Kiwoong Nam et al.

Genomics, 2022, 114 (1), pp.384 - 397. ⟨10.1016/j.ygeno.2021.12.014⟩

Article dans une revue hal-03574469v1
Deposit thumbnail

Host-plant adaptation as a driver of incipient speciation in the fall armyworm ( Spodoptera frugiperda )

Estelle Fiteni , Karine Durand , Sylvie Gimenez , Robert L. Meagher Jr. , Robert L Meagher Jr. et al.

BMC Ecology and Evolution, 2022, 22, pp.133. ⟨10.1186/s12862-022-02090-x⟩

Article dans une revue hal-03813221v1
Deposit thumbnail

The evolutionary process of invasion in the fall armyworm (Spodoptera frugiperda)

Sudeeptha Yainna , Wee Tek Tay , Karine Durand , Estelle Fiteni , Frédérique Hilliou et al.

Scientific Reports, 2022, 12, pp.21063. ⟨10.1038/s41598-022-25529-z⟩

Article dans une revue hal-03926301v1
Deposit thumbnail

Global population genomic signature of Spodoptera frugiperda (fall armyworm) supports complex introduction events across the Old World

Wee Tay , Rahul Rane , Amanda Padovan , Tom Walsh , Samia Elfekih et al.

Communications Biology, 2022, 5 (1), ⟨10.1038/s42003-022-03230-1⟩

Article dans une revue hal-03654235v1
Deposit thumbnail

Transcriptional differences between the two host strains of Spodoptera frugiperda (Lepidoptera: Noctuidae)

Marion Orsucci , Yves Moné , Philippe Audiot , Sylvie Gimenez , Sandra Nhim et al.

Peer Community Journal, 2022, 2, pp.e1. ⟨10.24072/pcjournal.77⟩

Article dans une revue hal-04124152v1
Deposit thumbnail

Mutagenesis of both prophenoloxidases in the fall armyworm induces major defects in metamorphosis

Magali Eychenne , Pierre-Alain Girard , Marie Frayssinet , Laijiao Lan , Sylvie Pages et al.

Journal of Insect Physiology, 2022, 139, ⟨10.1016/j.jinsphys.2022.104399⟩

Article dans une revue hal-03672488v1

A novel reference dated phylogeny for the genus Spodoptera Guenée (Lepidoptera: Noctuidae: Noctuinae): new insights into the evolution of a pest-rich genus

Gael Kergoat , Paul Z. Goldstein , Bruno Le Ru , Robert L. Meagher Jr. , Alberto Zilli et al.

Molecular Phylogenetics and Evolution, 2021, 161, pp.107161. ⟨10.1016/j.ympev.2021.107161⟩

Article dans une revue hal-03231530v1
Deposit thumbnail

Integrated miRNA and transcriptome profiling to explore the molecular determinism of convergent adaptation to corn in two lepidopteran pests of agriculture

Sylvie Gimenez , Imène Seninet , Marion Orsucci , Philippe Audiot , Nicolas Nègre et al.

BMC Genomics, 2021, 22, pp.606. ⟨10.1186/s12864-021-07905-7⟩

Article dans une revue hal-03327698v1
Deposit thumbnail

Geographic Monitoring of Insecticide Resistance Mutations in Native and Invasive Populations of the Fall Armyworm

Sudeeptha Yainna , Nicolas Nègre , Pierre J Silvie , Thierry Brévault , Wee Tek Tay et al.

Insects, 2021, 12 (5), pp.468. ⟨10.3390/insects12050468⟩

Article dans une revue hal-03247714v1
Deposit thumbnail

Adaptation by copy number variation increases insecticide resistance in the fall armyworm

Sylvie Gimenez , Heba Abdelgaffar , Gaëlle Le Goff , Frédérique Hilliou , Carlos Blanco et al.

Communications Biology, 2020, 3 (1), pp.1-10. ⟨10.1038/s42003-020-01382-6⟩

Article dans une revue hal-03065279v1
Deposit thumbnail

Positive selection alone is sufficient for whole genome differentiation at the early stage of speciation process in the fall armyworm

Ki Woong Nam , Sandra Nhim , Stéphanie Robin , Anthony Bretaudeau , Nicolas Nègre et al.

BMC Evolutionary Biology, 2020, 20 (1), ⟨10.1186/s12862-020-01715-3⟩

Article dans une revue hal-03099735v1
Deposit thumbnail

Partner-specific induction of Spodoptera frugiperda immune genes in response to the entomopathogenic nematobacterial complex Steinernema carpocapsae-Xenorhabdus nematophila

Louise Huot , Audrey Bigourdan , Sylvie Pages , Jean-Claude Ogier , Pierre-Alain Girard et al.

Developmental and Comparative Immunology, 2020, 108, ⟨10.1016/j.dci.2020.103676⟩

Article dans une revue hal-02516411v1
Deposit thumbnail

Interaction of a Densovirus with Glycans of the Peritrophic Matrix Mediates Oral Infection of the Lepidopteran Pest Spodoptera frugiperda

Laetitia Pigeyre , Malvina Schatz , Marc Ravallec , Leila Gasmi , Nicolas Negre et al.

Viruses, 2019, 11 (9), 21 p. ⟨10.3390/v11090870⟩

Article dans une revue hal-02320559v1
Deposit thumbnail

Spodoptera frugiperda transcriptional response to infestation by Steinernema carpocapsae

Louise Huot , Simon George , Pierre-Alain Girard , Dany Severac , Nicolas Nègre et al.

Scientific Reports, 2019, 9 (1), pp.12879. ⟨10.1038/s41598-019-49410-8⟩

Article dans une revue hal-02306099v1
Deposit thumbnail

Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Yves Moné , Sandra Nhim , Sylvie Gimenez , Fabrice Legeai , Imène Séninet et al.

BMC Genomics, 2018, 19 (1), pp.1-15. ⟨10.1186/s12864-018-5119-6⟩

Article dans une revue hal-01926342v1

Control of nerve cord formation by Engrailed and Gooseberry-Neuro: A multi-step, coordinated process

Nathalie Bonneaud , Sophie Layalle , Sophie Colomb , Christophe Jourdan , Alain Ghysen et al.

Developmental Biology, 2017, 432 (2), pp.273-285. ⟨10.1016/j.ydbio.2017.10.018⟩

Article dans une revue hal-01918046v1
Deposit thumbnail

Integration of temporal and spatial patterning generates neural diversity

Ted Erclik , Xin Li , Maximilien Courgeon , Claire Bertet , Zhenqing Chen et al.

Nature, 2017, 541 (7637), pp.365-370. ⟨10.1038/nature20794⟩

Article dans une revue hal-03083595v1
Deposit thumbnail

Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges

Anaïs Gouin , Anthony Bretaudeau , Kiwoong Nam , Sylvie Gimenez , Jean-Marc Aury et al.

Scientific Reports, 2017, 7 (1), pp.1-12. ⟨10.1038/s41598-017-10461-4⟩

Article dans une revue hal-01633879v1
Deposit thumbnail

Integration of temporal and spatial patterning generates neural diversity

Ted Erclik , Xin Li , Maximilien Courgeon , Claire Bertet , Zhenqing Chen et al.

Nature, 2017, 541 (7637), pp.365-370. ⟨10.1038/nature20794⟩

Article dans une revue hal-02620278v1
Deposit thumbnail

Diverse patterns of genomic targeting by transcriptional regulators in Drosophila melanogaster

Matthew Slattery , Lijia Ma , Rebecca F. Spokony , Robert K. Arthur , Pouya Kheradpour et al.

Genome Research, 2014, 24 (7), pp.1224-1235. ⟨10.1101/gr.168807.113⟩

Article dans une revue hal-01837274v1
Deposit thumbnail

Establishment and analysis of a reference transcriptome for Spodoptera frugiperda

Fabrice Legeai , Sylvie Gimenez , Bernard Duvic , Jean-Michel Escoubas , Anne-Sophie Gosselin Grenet et al.

BMC Genomics, 2014, 15 (1), pp.704. ⟨10.1186/1471-2164-15-704⟩

Article dans une revue hal-01058982v1
Deposit thumbnail

Genomic data integration for ecological and evolutionary traits in non-model organisms

Denis Tagu , John K. Colbourne , Nicolas Negre

BMC Genomics, 2014, 15, pp.490. ⟨10.1186/1471-2164-15-490⟩

Article dans une revue hal-01208730v1
Deposit thumbnail

Evolution of H3K27me3-marked chromatin is linked to gene expression evolution and to patterns of gene duplication and diversification

Robert K. Arthur , Lijia Ma , Matthew Slattery , Rebecca F. Spokony , Alexander Ostapenko et al.

Genome Research, 2014, 24 (7), pp.1115-1124. ⟨10.1101/gr.162008.113⟩

Article dans une revue hal-01837273v1
Deposit thumbnail

Chromatin insulator factors involved in long-range DNA interactions and their role in the folding of the Drosophila genome

Jutta Vogelmann , Antoine Le Gall , Stephanie Déjardin , Frédéric Allemand , Adrien Gamot et al.

PLoS Genetics, 2014, 10 (8), ⟨10.1371/journal.pgen.1004544⟩

Article dans une revue hal-02640560v1
Deposit thumbnail

Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning

Matthew Slattery , Roumen Voutev , Lijia Ma , Nicolas Negre , Kevin P. White et al.

PLoS Genetics, 2013, 9 (9), ⟨10.1371/journal.pgen.1003753⟩

Article dans une revue hal-01837251v1

Characterization of a CENP-B homolog in the holocentric Lepidoptera Spodoptera frugiperda

Emmanuelle d'Alençon , Nicolas Nègre , Slavica Stanojcic , Benjamin Alassoeur , Sylvie Gimenez et al.

Gene, 2011, 485 (2), pp.91-101. ⟨10.1016/j.gene.2011.06.007⟩

Article dans une revue istex hal-02647712v1

Mapping the distribution of chromatin proteins by ChIP on chip.

N. Negre , S. Lavrov , J. Hennetin , M. Bellis , Giacomo Cavalli

Methods in Enzymology, 2006, 410, pp.316-341. ⟨10.1016/S0076-6879(06)10015-4⟩

Article dans une revue hal-00113423v1

From genetics to epigenetics: the tale of Polycomb group and trithorax group genes

C. Grimaud , N. Negre , Giacomo Cavalli

Chromosome Research, 2006, 14 (Erratum in: Chromosome Res. 14, 701), pp.363-375. ⟨10.1007/s10577-006-1069-y⟩

Article dans une revue istex hal-00113074v1

Polycomb controls the cell fate.

N. Negre , Giacomo Cavalli

Médecine/Sciences, 2006, 22 (12), pp.1033-1035. ⟨10.1051/medsci/200622121033⟩

Article dans une revue hal-00122085v1

PRE-Mediated Bypass of Two Su(Hw) Insulators Targets PcG Proteins to a Downstream Promoter.

I. Comet , E. Savitskaya , B. Schuettengruber , N. Negre , S. Lavrov et al.

Developmental Cell, 2006, 11, pp.117-124. ⟨10.1016/j.devcel.2006.05.009⟩

Article dans une revue hal-00086918v1
Deposit thumbnail

Chromosomal Distribution of PcG Proteins during Drosophila Development

N. Negre , J. Hennetin , Ling V. Sun , S. Lavrov , M. Bellis et al.

PLoS Biology, 2006, 4, pp.e170. ⟨10.1371/journal.pbio.0040170⟩

Article dans une revue hal-00069809v1

Mitotic G2-arrest is required for neural cell fate determination in Drosophila.

Nicolas Nègre , Alain Ghysen , Anne Marie Martinez

Mechanisms of Development, 2003, 120 (2), pp.253-65. ⟨10.1016/s0925-4773(02)00419-7⟩

Article dans une revue istex hal-00260367v1

L’épigénétique : la même pour toutes les espèces?

Clémentine Vitte , Nicolas Nègre

ISTE. Epigénétique en écologie et évolution, pp.117-128, 2024, 978-1-78948-216-4

Chapitre d'ouvrage hal-04938864v1
Deposit thumbnail

A characterization of piARNs, their biogenesis and their targets in Spodoptera frugiperda (Lepidoptera, Noctuidae)

Imène Seninet , Mélanie Gasser , Sylvie Gimenez , Fabrice Legeai , Karine Durand et al.

2025

Pré-publication, Document de travail hal-05374380v1
Deposit thumbnail

Identification of a viral gene essential for the genome replication of a domesticated endogenous virus in ichneumonid parasitoid wasps

Ange Lorenzi , Fabrice Legeai , Véronique Jouan , Pierre-Alain Girard , Michael R Strand et al.

2024

Pré-publication, Document de travail hal-04558930v1
Deposit thumbnail

Genomic balancing selection is key to the invasive success of the fall armyworm

Sudeeptha Yainna , Wee Tek Tay , Estelle Fiteni , Fabrice Legeai , Anne-Laure Clamens et al.

2020

Pré-publication, Document de travail hal-02945606v1
Deposit thumbnail

Global FAW population genomic signature supports complex introduction events across the 1 Old World 2 3

Tay Wt , Rane R. , Padovan A. , Tom Walsh , Samia Elfekih et al.

2020

Pré-publication, Document de travail hal-02945590v1
Deposit thumbnail

Adaptation by copy number variation increases insecticide resistance in fall armyworms

Ki Woong Nam , Sylvie Gimenez , Frederique Hilliou , Carlos A Blanco , Sabine Hänniger et al.

2019

Pré-publication, Document de travail hal-02945633v1
Deposit thumbnail

Genomic differentiation is initiated without physical linkage among targets of divergent selection in Fall armyworms

Ki Woong Nam , Sandra Nhim , Stéphanie Robin , Anthony Bretaudeau , Nicolas Nègre et al.

2018

Pré-publication, Document de travail (preprint/prepublication) hal-02788771v1
Deposit thumbnail

Transcriptional plasticity evolution in two strains of Spodoptera frugiperda (Lepidoptera: Noctuidae) feeding on alternative host-plants

Marion Orsucci , Yves Moné , Philippe Audiot , Sylvie Gimenez , Sandra Nhim et al.

2018

Pré-publication, Document de travail (preprint/prepublication) hal-02790065v1