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Nunan Naoise

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A pulse of simulated root exudation alters the composition and temporal dynamics of microbial metabolites in its immediate vicinity

Julia Wiesenbauer , Alexander König , Stefan Gorka , Lilian Marchand , Naoise Nunan
Soil Biology and Biochemistry, 2024, 189, pp.109259. ⟨10.1016/j.soilbio.2023.109259⟩
Journal articles hal-04345938v1
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The phyto-bacterioplankton couple in a shallow freshwater ecosystem: Who leads the dance?

Imen Louati , Naoise Nunan , Kevin Tambosco , Cécile Bernard , Jean-François Humbert
Harmful Algae, 2023, 126, pp.102436. ⟨10.1016/j.hal.2023.102436⟩
Journal articles hal-04256441v1
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Opportunities and limits in imaging microorganisms and their activities in soil microhabitats

Charlotte Védère , L. Vieublé-Gonod , Naoise Nunan , Claire Chenu
Soil Biology and Biochemistry, 2022, 174, pp.108807. ⟨10.1016/j.soilbio.2022.108807⟩
Journal articles hal-03775657v1
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Competition within low-density bacterial populations as an unexpected factor regulating carbon decomposition in bulk soil

Alexandre Coche , Tristan Babey , Alain Rapaport , Laure Vieublé Gonod , Patricia Garnier
Soil Biology and Biochemistry, 2022, 164 (108423), ⟨10.1016/j.soilbio.2021.108423⟩
Journal articles insu-03347522v3
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Catching change in microbial diversity indicators under different soil organic matter managements: Higher taxonomic resolution, better discrimination?

Frédérique Changey , Naoise Nunan , Anke Herrmann , Thomas Lerch
Ecological Indicators, 2022, 139, pp.108897. ⟨10.1016/j.ecolind.2022.108897⟩
Journal articles hal-03654911v1
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Long-term ley and manure managements have consistent effects on microbial functional profiles and organic C groups across soils from a latitudinal gradient

Andong Shi , Naoise Nunan , João Figueira , Anke M Herrmann , Johanna Wetterlind
Agronomy for Sustainable Development, 2022, 42 (6), pp.107. ⟨10.1007/s13593-022-00837-w⟩
Journal articles hal-03852118v1
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Potential energetic return on investment positively correlated with overall soil microbial activity

Louis Dufour , Anke M Herrmann , Julie Leloup , Cédric Przybylski , Ludovic Foti
Soil Biology and Biochemistry, 2022, 173, pp.108800. ⟨10.1016/j.soilbio.2022.108800⟩
Journal articles hal-03775651v1
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Scenario modelling of carbon mineralization in 3D soil architecture at the microscale: Toward an accessibility coefficient of organic matter for bacteria

Bruno Mbé , Olivier Monga , Valérie Pot , Wilfred Otten , Frédéric Hecht
European Journal of Soil Science, 2022, 73, pp.e13144. ⟨10.1111/ejss.13144⟩
Journal articles hal-03365963v1
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Substrate spatial heterogeneity reduces soil microbial activity

Andong Shi , Arjun Chakrawal , Stefano Manzoni , Benjamin M C Fischer , Naoise Nunan
Soil Biology and Biochemistry, 2021, ⟨10.1016/j.soilbio.2020.108068⟩
Journal articles hal-03019034v1
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Theory of microbial coexistence in promoting soil–plant ecosystem health

Na Zhang , Naoise Nunan , Penny Hirsch , Bo Sun , Jizhong Zhou
Biology and Fertility of Soils, 2021, 57, pp.897-911. ⟨10.1007/s00374-021-01586-w⟩
Journal articles hal-03336516v1
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Can Organic Amendments Improve Soil Physical Characteristics and Increase Maize Performances in Contrasting Soil Water Regimes?

Phimmasone Sisouvanh , Vidhaya Trelo-Ges , Supat Isarangkool Na Ayutthaya , Alain Pierret , Naoise Nunan
Agriculture, 2021, 11 (2), pp.132. ⟨10.3390/agriculture11020132⟩
Journal articles hal-03336545v1
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Topsoil characteristics of forests and lawns along an urban–rural gradient in the Paris region (France)

Ludovic Foti , Sébastien Barot , Jacques Gignoux , Michel Grimaldi , Jean‐christophe Lata
Soil Use and Management, 2021, 37 (4), pp.749-761. ⟨10.1111/sum.12640⟩
Journal articles hal-03010483v1
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Dynamic interactions at the mineral–organic matter interface

Markus Kleber , Ian C Bourg , Elizabeth K Coward , Colleen M Hansel , Satish B. Myneni
Nature Reviews Earth & Environment, 2021, 2, pp.402-421. ⟨10.1038/s43017-021-00162-y⟩
Journal articles hal-03225065v1
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Temperature and soil management effects on carbon fluxes and priming effect intensity

Raphaël Guttières , Naoise Nunan , Xavier Raynaud , Gérard Lacroix , Sébastien Barot
Soil Biology and Biochemistry, 2021, 153, pp.108103. ⟨10.1016/j.soilbio.2020.108103⟩
Journal articles hal-03086435v1
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Dynamic upscaling of decomposition kinetics for carbon cycling models

Arjun Chakrawal , Anke M Herrmann , John Koestel , Jerker Jarsjö , Naoise Nunan
Geoscientific Model Development, 2020, 13, pp.1399-1429. ⟨10.5194/gmd-13-1399-2020⟩
Journal articles hal-02918377v1
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Persistence of soil organic carbon caused by functional complexity

Johannes Lehmann , Colleen Hansel , Christina Kaiser , Markus Kleber , Kate Maher
Nature Geoscience, 2020, 13 (8), pp.529-534. ⟨10.1038/s41561-020-0612-3⟩
Journal articles hal-02918387v1
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Tree growth and macrofauna colonization in Technosols constructed from recycled urban wastes

Charlotte Pruvost , Jérôme Mathieu , Naoise Nunan , Agnès Gigon , Anne Pando
Ecological Engineering, 2020, 153, pp.105886. ⟨10.1016/j.ecoleng.2020.105886⟩
Journal articles hal-02887656v1
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The ecology of heterogeneity: soil bacterial communities and C dynamics

Naoise Nunan , Hannes Schmidt , Xavier Raynaud
Philosophical Transactions of the Royal Society B: Biological Sciences, 2020, 375 (1798), ⟨10.1098/rstb.2019.0249⟩
Journal articles hal-02895829v1
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Recognizing patterns: spatial analysis of observed microbial colonization on root surfaces

Hannes Schmidt , Naoise Nunan , Alexander Hoeck , Thilo Eickhorst , Christina Kaiser
Frontiers in Environmental Science, 2018, 6, ⟨10.3389/fenvs.2018.00061⟩
Journal articles hal-02620587v1
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Author Correction: Effects of habitat constraints on soil microbial community function

Naoise Nunan , Julie Leloup , Léo S. Ruamps , Valerie Pouteau , Claire Chenu
Scientific Reports, 2018, 8 (1), 4057 p. ⟨10.1038/s41598-018-22119-w⟩
Journal articles hal-01875840v1

Citation stacking in soil science articles: our response to the open letter by concerned early-career soil scientists

Jan Willem van Groenigen , Alberto Agnelli , Junhong Bai , Yvan Capowiez , Mariluz Cayuela
Geoderma, 2018, 328, pp.119-120. ⟨10.1016/j.geoderma.2018.03.023⟩
Journal articles hal-03820011v1
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Emergent properties of microbial activity in heterogeneous soil microenvironments: Different research approaches are slowly converging, yet major challenges remain

Philippe Baveye , Wilfred Otten , Alexandra Kravchenko , Maria Balseiro Romero , Eleonore Beckers
Frontiers in Microbiology, 2018, 9 (1929), pp.1929. ⟨10.3389/fmicb.2018.01929⟩
Journal articles hal-01857291v1

Unravelling the effects of plant species diversity and aboveground litter input on soil bacterial communities

Julie Leloup , Mathilde Baude , Naoise Nunan , Jacques Mériguet , Isabelle Dajoz
Geoderma, 2018, 317, pp.1-7. ⟨10.1016/j.geoderma.2017.12.018⟩
Journal articles hal-02458148v1
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The microbial habitat in soil: Scale, heterogeneity and functional consequences

Naoise Nunan
Journal of Plant Nutrition and Soil Science, 2017, 180 (4), pp.425 - 429. ⟨10.1002/jpln.201700184⟩
Journal articles hal-01611866v1
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Increasing soil carbon storage: mechanisms, effects of agricultural practices and proxies. A review

Marie-France Dignac , Delphine Derrien , Pierre Barre , Sébastien Barot , Lauric Cécillon
Agronomy for Sustainable Development, 2017, 37:14 (2), ⟨10.1007/s13593-017-0421-2⟩
Journal articles hal-01595533v1

Modelling the genesis of equatorial podzols: age and implications on carbon fluxes

Cédric Doupoux , Patricia Merdy , Célia Regina Montes , Naoise Nunan , Adolpho José Melfi
Biogeosciences Discussions, 2017, pp.1-18. ⟨10.5194/bg-2016-545⟩
Journal articles hal-02188667v1
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Modelling the genesis of equatorial podzols: age and implications on carbon fluxes

Cédric Doupoux , Patricia Merdy , Célia Regina Montes , Naoise Nunan , Adolpho José Melfi
Biogeosciences Discussions, 2017, pp.1-18
Journal articles hal-02009746v1
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Short-term responses and resistance of soil microbial community structure to elevated CO2 and N addition in grassland mesocosms

Marie Simonin , Naoise Nunan , Juliette Bloor , Valérie Pouteau , Audrey Niboyet
FEMS Microbiology Letters, 2017, 364 (9), ⟨10.1093/femsle/fnx077⟩
Journal articles hal-01525344v1

Trace element concentrations along a gradient of urban pressure in forest and lawn soils of the Paris region (France)

Ludovic Foti , Florence Dubs , Jacques Gignoux , Jean-Christophe Lata , Thomas Lerch
Science of the Total Environment, 2017, 598, pp.938-948. ⟨10.1016/j.scitotenv.2017.04.111⟩
Journal articles hal-02458095v1
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Effects of habitat constraints on soil microbial community function

Naoise Nunan , Julie Leloup , Leo S. Ruamps , Valerie Pouteau , Claire Chenu
Scientific Reports, 2017, 7, pp.4280. ⟨10.1038/s41598-017-04485-z⟩
Journal articles hal-01567140v1
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Modelling the genesis of equatorial podzols: age and implications for carbon fluxes

Cédric Doupoux , Patricia Merdy , Célia Regina Montes , Naoise Nunan , Adolpho José Melfi
Biogeosciences, 2017, 14 (9), pp.2429-2440. ⟨10.5194/bg-14-2429-2017⟩
Journal articles hal-02184058v1

Altered Precipitation Seasonality Impacts the Dominant Fungal but Rare Bacterial Taxa in Subtropical Forest Soils

Qian Zhao , Shuguang Jian , Naoise Nunan , Fernando T. Maestre , Leho Tedersoo
Biology and fertility of soils, 2017, 53 (2), pp.231--245. ⟨10.1007/s00374-016-1171-z⟩
Journal articles hal-03986627v1
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Stocker du C dans les sols : Quels mécanismes, quelles pratiques agricoles, quels indicateurs ?

Delphine Derrien , Marie-France Dignac , Isabelle Basile-Doelsch , Sébastien Barot , Lauric Cécillon
Étude et Gestion des Sols, 2016, 23, pp.193-223
Journal articles hal-01595612v1

Simulating Biological Dynamics Using Partial Differential Equations: Application to Decomposition of Organic Matter in 3D Soil Structure

Babacar Lèye , Doanh Nguyen-Ngoc , Olivier Monga , Patricia Garnier , Naoise Nunan
Vietnam Journal of Mathematics, 2015, 43 (4), pp.801-817. ⟨10.1007/s10013-015-0159-6⟩
Journal articles hal-01419760v1

The spatial distribution of exoenzyme activities across the soil micro-landscape, as measured in micro- and macro-aggregates, and ecosystem processes

Haryun Kim , Naoise N. Nunan , Arnaud Dechesne , Sabrina Juarez , Geneviève Grundmann
Soil Biology and Biochemistry, 2015, 91, pp.258-267. ⟨10.1016/j.soilbio.2015.08.042⟩
Journal articles hal-02635556v1

Metabolising old soil carbon: simply a matter of simple organic matter?

Naoise N. Nunan , Thomas Z. Lerch , Valerie Pouteau , Philippe Mora , Frédérique Changey
Soil Biology and Biochemistry, 2015, 88, pp.128-136. ⟨10.1016/j.soilbio.2015.05.018⟩
Journal articles hal-02631552v1

Coupling Between and Among Ammonia Oxidizers and Nitrite Oxidizers in Grassland Mesocosms Submitted to Elevated CO2 and Nitrogen Supply

Marie Simonin , Xavier Le Roux , Franck Poly , Catherine Lerondelle , Bruce A. Hungate
Microbial ecology, 2015, 70 (3), pp.809-818. ⟨10.1007/s00248-015-0604-9⟩
Journal articles hal-01569713v1
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Modeling the effect of soil meso- and macropores topology on the biodegradation of a soluble carbon substrate

Laure E. Vogel , David D. Makowski , Patricia P. Garnier , Laure Vieublé-Gonod , Yves Coquet
Advances in Water Resources, 2015, 83, pp.123-136. ⟨10.1016/j.advwatres.2015.05.020⟩
Journal articles insu-01170155v1

Thermal acclimation of organic matter decomposition in an artificial forest soil is related to shifts in microbial community structure

Hui Wei , Bertrand Guenet , Sara Vicca , Naoise Nunan , Hamada Abdelgawad
Soil Biology and Biochemistry, 2014, 71, pp.1-12. ⟨10.1016/j.soilbio.2014.01.003⟩
Journal articles hal-02636795v1

Localization of soil organic matter in soil aggregates using synchrotron-based X-ray microtomography

Stephan Peth , Claire Chenu , Nelly Leblond , Anneka Mordhorst , Patricia Garnier
Soil Biology and Biochemistry, 2014, 78, pp.189-194. ⟨10.1016/j.soilbio.2014.07.024⟩
Journal articles hal-01192498v1
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Spatial Ecology of Bacteria at the Microscale in Soil

Xavier Raynaud , Naoise Nunan
Journal articles hal-01252483v1

Community assembly effects shape the biodiversity ecosystem functioning relationships

Benoit Jaillard , Alain Rapaport , Jérôme Harmand , Alain Brauman , Naoise Nunan
Functional Ecology, 2014, 28 (6), pp.1523-1533. ⟨10.1111/1365-2435.12267⟩
Journal articles hal-00937779v1

Effects of different soil structures on the decomposition of native and added organic carbon

Sabrina Juarez , Naoise Nunan , Anne-Claire Duday , Valerie Pouteau , Sonja Schmidt
European Journal of Soil Biology, 2013, 58, pp.81--90. ⟨10.1016/j.ejsobi.2013.06.005⟩
Journal articles hal-01567153v1

Regulation of soil organic C mineralisation at the pore scale

Leo S. Ruamps , Naoise Nunan , Valerie Pouteau , Julie Leloup , Xavier Raynaud
FEMS Microbiology Ecology, 2013, 86 (1), pp.26--35. ⟨10.1111/1574-6941.12078⟩
Journal articles hal-01567154v1

Agricultural management affects the response of soil bacterial community structure and respiration to water-stress

Aurore Kaisermann , Adélaïde Roguet , Naoise Nunan , Pierre-Alain Maron , Nicholas Ostle
Soil Biology and Biochemistry, 2013, 66, pp.69 - 77. ⟨10.1016/j.soilbio.2013.07.001⟩
Journal articles hal-02652776v1

Soil carbon mineralisation responses to alterations of microbial diversity and soil structure

Sabrina Juarez , Naoise Nunan , Anne-Claire Duday , Valerie Pouteau , Claire Chenu
Biology and Fertility of Soils, 2013, 49 (7), pp.939--948. ⟨10.1007/s00374-013-0784-8⟩
Journal articles hal-01567152v1

Modeling Microbial Decomposition in Real 3D Soil Structures Using Partial Differential Equations

Doanh Nguyen-Ngoc , Babacar Leye , Olivier Monga , Patricia Garnier , Naoise Nunan
International Journal of Geosciences, 2013, 04 (10), pp.15-26. ⟨10.4236/ijg.2013.410A003⟩
Journal articles hal-01601955v1

Impact of soil matric potential on the fine-scale spatial distribution and activity of specific microbial degrader communities

Cécile Monard , Chokri Mchergui , Naoise Nunan , Fabrice Martin-Laurent , Laure Vieublé Gonod
FEMS Microbiology Ecology, 2012, 81 (3), pp.673-683. ⟨10.1111/j.1574-6941.2012.01398.x⟩
Journal articles hal-00793558v1

Dynamics of bacterial communities in relation to soil aggregate formation during the decomposition of C-13-labelled rice straw

A. A. Blaud , Thomas T. Lerch , Naoise N. Nunan , Claire Chenu , Alain Brauman Brauman
Applied Soil Ecology, 2012, 53, pp.1-9. ⟨10.1016/j.apsoil.2011.11.005⟩
Journal articles hal-00999935v1
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Litter inputs and plant interactions affect nectar sugar content

Mathilde Baude , Julie Leloup , Séverine Suchail , Béatrice Allard , Danielle Benest
Journal of Ecology, 2011, 99 (3), pp.828-837. ⟨10.1111/j.1365-2745.2011.01793.x⟩
Journal articles hal-02047775v1

Variations in microbial isotopic fractionation during soil organic matter decomposition

Thomas Z Lerch , Naoise Nunan , Marie-France Dignac , Claire Chenu , André A. Mariotti
Biogeochemistry, 2011, 106 (1), pp.5-21. ⟨10.1007/s10533-010-9432-7⟩
Journal articles bioemco-00542772v1

Microbial biogeography at the soil pore scale

Léo Simon Ruamps , Naoise Nunan , Claire Chenu
Soil Biology and Biochemistry, 2011, 43, pp.280-286. ⟨10.1016/j.soilbio.2010.10.010⟩
Journal articles bioemco-00542769v1

Remediation of polycyclic aromatic hydrocarbon (PAH) contaminated soil through composting with fresh organic wastes

Yuan Zhang , Yong-Guan Zhu , Sabine Houot , Min Qiao , Naoise Nunan
Environmental Science and Pollution Research, 2011, 18 (9), pp.1574-1584. ⟨10.1007/s11356-011-0521-5⟩
Journal articles bioemco-00640498v1

Carbon dynamics in topsoil and in subsoil may be controlled by different regulatory mechanisms

Clémence Salomé , Naoise Nunan , Valérie Pouteau , Thomas Z. Lerch , Claire Chenu
Global Change Biology, 2010, 16, pp.416-426
Journal articles bioemco-00430863v1

A miniaturised method to quantify microbial mineralisation of 13C-labelled organic compounds in small soil samples

Cécile Monard , Naoise Nunan , Gérard Bardoux , Laure Vieublé
Soil Biology and Biochemistry, 2010, 42 (9), pp.1640-1642. ⟨10.1016/j.soilbio.2010.05.012⟩
Journal articles hal-01192216v1

Spatial dependance of organic carbon-metal relationships A multi-scale statistical analysis, from horizon to field

Christophe Moni , Abad Chabbi , Naoise Nunan , Cornelia Rumpel , Claire Chenu
Geoderma, 2010, 158, pp.120-127. ⟨10.1016/j.geoderma.2010.04.014⟩
Journal articles bioemco-00542719v1

A miniaturised method to quantify microbial mineralisation of C-13-labelled organic compounds in small soil samples

Cécile Monard , Naoise Nunan , Gérard Bardoux , Vieublé-Gonod Laure
Soil Biology and Biochemistry, 2010, 42, pp.1640-1642. ⟨10.1016/j.soilbio.2005.05.012⟩
Journal articles bioemco-00542729v1

Microbial biogeography at the soil pore scale

Claire Chenu , Naoise Nunan , Léo Simon Ruamps
Soil Biology and Biochemistry, 2010, 2011 (43), pp.280-286
Journal articles bioemco-00577735v1
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Assessment of mycorrhizal colonisation and soil nutrients in unmanaged fire-impacted soils from two target restoration sites

Jm Dias , Rs Oliveira , Ar Franco , Karl Ritz , Naoise Nunan
Spanish Journal of Agricultural Research, 2010, 8, pp.S86-S95
Journal articles bioemco-00542730v1

Dynamics of soil microbial populations involved in 2,4-D biodegradation in soil revealed by FAME-based Stable Isotope Probing

Thomas Lerch , Marie-France Dignac , Naoise Nunan , Gérard Bardoux , Enrique Barriuso
Soil Biology and Biochemistry, 2009, 41 (1), pp.77-85. ⟨10.1016/j.soilbio.2008.09.020⟩
Journal articles hal-01192030v1

Dynamics of soil microbial populations involved in 2,4-D biodegradation revealed by FAME-based Stable Isotope Probing

Thomas Lerch , Marie-France Dignac , Naoise Nunan , Gérard Bardoux , Enrique Barriuso
Soil Biology and Biochemistry, 2009, 41, pp.77-85
Journal articles bioemco-00430846v1

Response of fungal, bacterial and ureolytic communities to synthetic sheep urine deposition in a grassland soil

Brajesh K. Singh , Naoise Nunan , Peter Millard
FEMS Microbiology Ecology, 2009, 70, pp.109-117
Journal articles bioemco-00430834v1

Carbon dynamics in topsoil and in subsoil may be controlled by different regulatory mechanisms

Clemence Salome , Naoise Nunan , Valérie Pouteau , Thomas Z Lerch , Claire Chenu
Global Change Biology, 2009, 2010 (16), pp.416-426. ⟨10.1111/j.1365-2486.2009.01884.x⟩
Journal articles bioemco-00576323v1

Ageing processes and soil microbial community effects on the biodegradation of soil 13C-2,4-D nonextractable residues

Thomas Lerch , Marie-France Dignac , Naoise Nunan , Enrique Barriuso , André A. Mariotti
Environmental Pollution, 2009, 157 (11), pp.2985-2993. ⟨10.1016/j.envpol.2009.05.058⟩
Journal articles hal-01192197v1

Impact of landuse change on the molecular composition of soil organic matter

Cornelia Rumpel , Abad Chabbi , Naoise Nunan , Marie-France Dignac
Journal of Analytical and Applied Pyrolysis, 2009, 85, pp.431-434
Journal articles bioemco-00430842v1

Ageing processes and fresh soil addition affect the mineralisation of soil 13C-2,4-D nonextractable residues and the structure of microbial degraders.

Marie-France Dignac , Thomas Lerch , Naoise Nunan , Enrique Barriuso , André A. Mariotti
Environmental Pollution, 2009, 157, pp.2985-2993. ⟨10.1016/j.envpol.2009.05.058⟩
Journal articles bioemco-00453353v1

Ageing processes and soil microbial community effects on the biodegradation of soil C-13-2,4-D nonextractable residues

Thomas Z. Lerch , Marie-France Dignac , Naoise Nunan , Enrique Barriuso , André A. Mariotti
Environmental Pollution, 2009, 157, pp.2985-2993. ⟨10.1016/j.envpol.2009.05.058⟩
Journal articles bioemco-00430838v1

Gas chromatography metabolic profiling: a sensitive tool for functional microbial ecology

E. Coucheney , T. Daniell , Claire Chenu , Naoise Nunan
Journal of Microbiological Methods, 2008, 75, pp.491-500
Journal articles bioemco-00453813v1

Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots

Brajesh K. Singh , Naoise Nunan , Karyn P. Ridgeway , Jim W. Mcnicol , Peter J.W. Young
Environmental Microbiology, 2008, 10 (2), pp.534-541. ⟨10.1111/j.1462-2920.2007.01474.x⟩
Journal articles bioemco-00321207v1

Microbial Distribution in Soils: Physics and Scaling

Iain M. Young , John W. Crawford , Naoise Nunan , Wilfred Otten , Andrew Spiers
Advances in Agronomy, 2008, 100, pp.81-121. ⟨10.1016/S0065-2113(08)00604-4⟩
Journal articles bioemco-00338454v1

Gas chromatographic metabolic profiling: A sensitive tool for functional microbial ecology

Elsa Coucheney , Naoise Nunan , Tim J. Daniell , Claire Chenu
Journal of Microbiological Methods, 2008, 75, pp.491-500. ⟨10.1016/j.mimet.2008.07.029⟩
Journal articles bioemco-00337463v1

A novel method for the study of the biophysical interface in soils using nano-scale secondary ion mass spectrometry

Anke M. Herrmann , Peta L. Clode , Ian R. Fletcher , Naoise Nunan , Elizabeth A. Stockdale
Rapid Communications in Mass Spectrometry, 2007, 21, pp.29-34. ⟨10.1002/rcm.2811⟩
Journal articles bioemco-00136963v1

Nano-scale secondary ion mass spectrometry — A new analytical tool in biogeochemistry and soil ecology: A review article

A. Herrmann , Karl Ritz , Naoise Nunan , Peta L. Clode , Jennifer Pett-Ridge
Soil Biology and Biochemistry, 2007, 39 (8), pp.1835-1850. ⟨10.1016/j.soilbio.2007.03.011⟩
Journal articles bioemco-00167110v1

Multivariate analysis of protein profiles of metal hyperaccumulator Thlaspi caerulescens accessions

Marjo H. Tuomainen , Naoise Nunan , Satu J. Lehesranta , Arja I. Tervahauta , Viivi H. Hassinen
Proteomics, 2006, 6, pp.3696-3706. ⟨10.1002/pmic.200501357⟩
Journal articles bioemco-00136960v1
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Sheep-urine-induced changes in soil microbial community structure

Naoise Nunan , Brajesh K. Singh , Eileen Reid , Brian Ord , Artemis Papert
FEMS Microbiology Ecology, 2006, 56, pp.310-320. ⟨10.1111/j.1574-6941.2006.00072.x⟩
Journal articles bioemco-00136989v1

Proteomic analysis of the potato tuber life cycle

Satu J. Lehesranta , Howard V. Davies , Louise V. T. Shepherd , Kaisa M. Koistinen , Nathalie Massat
Proteomics, 2006, 6, pp.6042-6052. ⟨10.1002/pmic.200600383⟩
Journal articles bioemco-00136954v1

Investigating microbial micro-habitat structure using X-ray computed tomography

Naoise Nunan , Karl Ritz , Mark Rivers , Debbie S. Feeney , Iain M. Young
Geoderma, 2006, 133, pp.398-407. ⟨10.1016/j.geoderma.2005.08.004⟩
Journal articles bioemco-00138740v1

Three-dimensional microorganization of the soil-root-microbe system

Debbie S. Feeney , John W. Crawford , Tim J. Daniell , Paul D. Hallett , Naoise Nunan
Microbial ecology, 2006, 52, pp.151-158. ⟨10.1007/s00248-006-9062-8⟩
Journal articles bioemco-00136966v1

Comparison of Tuber Proteomes of Potato Varieties, Landraces, and Genetically Modified Lines

Satu J. Lehesranta , Howard V. Davies , Louise V.T. Shepherd , Naoise Nunan , Jim W. Mcnicol
Plant Physiology, 2005, 138, pp.1690-1699. ⟨10.1104/pp.105.060152⟩
Journal articles bioemco-00136947v1

The impact of meso- and macro-fauna on bacterial distribution in the surface horizons of an upland grassland soil.

Patricia M.C. Bruneau , Donald A. Davidson , Ian C. Grieve , Iain M. Young , Naoise Nunan
FEMS Microbiology Ecology, 2005, 52, pp.139-144. ⟨10.1016/j.femsec.2004.10.010⟩
Journal articles bioemco-00136946v1

Links between plant and rhizoplane bacterial communities in grassland soils characterized using molecular techniques

Naoise Nunan , Tim J. Daniell , Brajesh K. Singh , Artemis Papert , James W. Mcnicol
Applied and Environmental Microbiology, 2005, 71 (11), pp.6784-6792. ⟨10.1128/AEM.71.11.6784-6792.2005⟩
Journal articles bioemco-00168822v1

Heterogeneity and C dynamics in soil

Naoise Nunan , Hannes Schmidt , Claire Chenu , Valerie Pouteau , Xavier Raynaud
EGU General Assembly 2023, European Geosciences Union, Apr 2023, Vienne, Austria. pp.EGU23-13193, ⟨10.5194/egusphere-egu23-13193⟩
Conference papers hal-04631954v1

Distinct patterns of change of organic matter in bulk soil or in earthworm casts during ageing

Katell Quénéa , Naoise Nunan , Thomas Z. Lerch , Claire Chenu , Valérie Pouteau
12th International Symposium on Earthworm Ecology, Jul 2022, Rennes, France
Conference papers hal-03823082v1

Distinct patterns of change of organic matter in bulk soil or in earthworm casts during ageing

Katell Quenea , Naoise Nunan , Thomas Z. Lerch , Claire Chenu , Emmanuelle Aubry
EGU General Assembly 2022, European Geosciences Union, May 2022, Vienne, Austria. pp.EGU22-13352, ⟨10.5194/egusphere-egu22-13352⟩
Conference papers hal-03823072v1

Rediscovering microbial metabolism in terrestrial ecosystems – A bioenergetics approach

Anke M Herrmann , Arjun Chakrawal , Tobias Bölscher , Louis Dufour , Naoise Nunan
The Soil Ecology Society Biennial Meeting 2019, May 2019, Toledo, United States
Conference papers hal-04490230v1
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Accounting for microbial habitats in modeling soil organic matter dynamics

Claire Chenu , Patricia Garnier , Naoise Nunan , Valerie Pot-Genty , Xavier Raynaud
EGU 2017, European Geophysical Union General Assembly 2017, 2017, Vienne, Austria
Conference papers hal-01535185v1
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Does pore scale biogeography exist in different soil types?

Claire Chenu , Valerie Pouteau , Naoise Nunan
6th International Symposium on Soil Organic Matter, Sep 2017, Harpenden, United Kingdom
Conference papers hal-01604612v1
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Habitat constraints on the functional significance of soil microbial communities

Naoise Nunan , Julie Leloup , Léo Ruamps , Valerie Pouteau , Claire Chenu
EGU 2017, European Geophysical Union General Assembly 2017, Apr 2017, Vienne, Austria. pp.EGU2017-6745
Conference papers hal-01535184v1

A new individual based approach to deal with soil complexity

Xavier Portell Canal , Valerie Pot-Genty , Philippe Baveye , Patricia Garnier , Claire Chenu
Austin International Conference on Soil Modeling, International Soil Modeling Consortium (ISMC), Mar 2016, Austin, United States
Conference papers hal-01591739v1

Accounting for microbial habitats in modelling soil organic matter dynamics

Claire Chenu , Patricia Garnier , Naoise Nunan , Valerie Pot-Genty , Xavier Raynaud
SOMmic Conference, Microbial contribution and impact on soil organic matter structure and genesis, Nov 2016, Leipzig, Germany
Conference papers hal-01580643v1

C dynamics in Amazonian podzols under climate change

Naoise Nunan , Andre Soro , Kevin Potard , Valerie Pouteau , Celia Montes
EGU General Assembly 2016 Conference Abstracts, European Geophysical Union, European Geosciences Union (EGU). AUT., 2016, Vienna, Austria
Conference papers hal-01383565v1
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From the pore scale to the core scale: How to model the spatial interactions in soils ?

Patricia Garnier , Valerie Pot-Genty , Olivier Monga , Claire Chenu , Laure Vieublé
EGU General Assembly 2015, European Geosciences Union, Apr 2015, Vienne, Austria
Conference papers hal-01191444v1

Revisiting the terrestrial carbon cycle: New insights into microbial metabolism

Anke M Herrmann , Kristin Boye , Tobias Bölscher , Naoise Nunan , Elsa Coucheney
International Society for Biological Calorimetry XVIII ISBC Conference, International Society for Biological Calorimetry, Jun 2014, Lund, Sweden
Conference papers hal-04489784v1

Sensibilité du C profond des sols aux changements climatiques : Minéralisation des matières organiques du sol à différentes teneur en eau en profondeur dans un PODZOSOL amazonien

Kevin Potard , Naoise Nunan , Claire Chenu , Yves Lucas
12 Journées nationales d'étude des sols, Jun 2014, Le Bourget, France
Conference papers hal-01622982v1

Les sols et la préservation de la biodiversité

Claire Chenu , Eric Blanchart , Antonio Bispo , Daniel Cluzeau , Thibaud Decaëns
Journée Mondiale des Sols, Dec 2014, Paris, France
Conference papers hal-01620711v1

Revisiting the terrestrial carbon cycle: New insights from isothermal microcalorimetry

Anke M Herrmann , Kristin Boye , Tobias Bölscher , Naoise Nunan , Elsa Coucheney
EGU General Assembly 2014, European Geosciences Union, Apr 2014, Wien, Austria, Austria
Conference papers hal-04489715v1

Living in soil pores: physical and nutritional constraints for microbial decomposers of soil organic matter

Claire Chenu , Naoise Nunan , Sabrina Juarez , Fernando Moyano , Léo Ruamps
Goldschmidt 2013, Aug 2013, Florence, Italy
Conference papers hal-01619008v1

Modelling carbon dynamics in unsaturated soil pore space or how diffusion regulates decomposition

Laure Vogel , Patricia Garnier , Laure Vieublé , Claire Chenu , Naoise Nunan
Porous Media Process Modelling Workshop: 3D Imaging and Applications in Geosciences, University of Abertay. GBR., Oct 2013, Dundee, United Kingdom
Conference papers hal-01620712v1

Non invasive localisation of soil organic matter in soil aggregates using synchrotron based X-ray microtomography

Stephan Peth , Claire Chenu , Nelly Leblond , Patricia Garnier , Naoise Nunan
4th International Congress EUROSOIL 2012. Soil science for the benefit of mankind and environment, Jul 2012, Bari, Italy. 2696 p
Conference papers hal-01628663v1

Distribution and mineralisation rate of soil organic matter at the pore scale

Léo Ruamps , Naoise Nunan , Valerie Pouteau , Julie Leloup , Xavier Raynaud
Soil Organic Matter Stabilization conference, SOM 2012, Oct 2012, Monte Verita, Switzerland
Conference papers hal-01628866v1

Modeling organic matter decomposition in heterogeneous soil structure at microbial habitats scale

Laure Vogel , Valerie Pot-Genty , Patricia Garnier , Laure Vieublé , Marc Pinheiro
Eurosoil 2012, Soil science for the benefit of mankind and environment, 4th International Congress of ECSSS, Jul 2012, Bari, Italy. 2696 p
Conference papers hal-01628869v1

Suivi des dynamiques conjointes du carbone et des communautés microbiennes d'un sol par traçage du 13 C en abondance naturelle

Thomas Lerch , Marie-France Dignac , Naoise Nunan , André A. Mariotti
Séminaire, Jan 2009, Sainte-Maxime, France
Conference papers hal-01192115v1

Rhizoplane and rhizosphere bacterial populations have different views of an upland grassland world.

Naoise Nunan , B.K. Singh , Peter Millard
9th Symposium on Bacterial Genetics and Ecology, Jun 2007, Wernigerode, Germany. pp.92
Conference papers bioemco-00174956v1

Metabolic profiling of microbial adaptation to variable environments

Elsa Coucheney , Tim J. Daniell , Claire Chenu , Valérie Pouteau , Gérard Bardoux
9th Symposium onBacterail Genetics and Ecology, Jun 2007, Wernigerode, Germany. pp.100
Conference papers bioemco-00174957v1

Utilisation de profils métaboliques pour l'étude de l'adaptation des communautés microbiennes du sol à leur environnement

Elsa Coucheney , Naoise Nunan , Tim J. Daniell , Claire Chenu
Journées Nationales de l'Etude des Sols, Apr 2007, Angers, France. pp.345-346
Conference papers bioemco-00174958v1

Effets de variations de conditions environnementales sur la décomposition microbienne dans les sols

Elsa Coucheney , Naoise Nunan , Claire Chenu
Les matières organiques en France. Etat de l'art et prospectives, Jan 2006, Carqueiranne, France
Conference papers bioemco-00177309v1

Microbe-habitat interactions in soil

Naoise Nunan
Asia-Link Programme on Academic Exchange of Soil Biophysics – the Fundamental Science behind the Improvement of Degraded Soils, Nov 2006, Dhulikhel, Nepal. pp.10
Conference papers bioemco-00174959v1

Soilμ3d project: emergent properties of soil microbial functions from 3d modelling and spatial descriptors of pore scale heterogeneity

Patricia Garnier , Valérie Pot , Claire Chenu , Philippe Baveye , David Montagne
Eurosoil 2021 virtual congress, Aug 2021, Virtuel, Genève, Switzerland
Conference poster hal-03652988v1
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Does pore scale biogeography exist in different soil types ?

Claire Chenu , Valerie Pouteau , Naoise Nunan
EGU 2018, European Geosciences Union General Assembly 2018, Apr 2018, Vienne, Austria. Geophysical Research Abstracts Vol. 20, 2018
Conference poster hal-01765428v1

État et localisation des matières organiques dans le sol : Relations avec l’activité microbienne et conséquences pour le fonctionnement du sol

Claire Chenu , Naoise Nunan , Laure Vieublé , Patricia Garnier , Valerie Pot-Genty
Utilisation du potentiel biologique des sols, un atout pour la production agricole, Jun 2015, Paris, France. Academie Agriculture de France, 2 p., 2015
Conference poster hal-01613627v1

Predicting the response of soil organic matter microbial decomposition to moisture

Claire Chenu , Patricia Garnier , Olivier Monga , Fernando Moyano , Valerie Pot-Genty
EGU General Assembly 2014, Apr 2014, Vienne, Austria. European Geosciences Union, Geophysical Research Abstracts, 2014, Geophysical Research Abstracts
Conference poster hal-01618404v1

Non-invasive localization of organic matter in soil aggregates using SR-μCT

Stephan Peth , Anneka Mordhorst , Claire Chenu , Daniel Uteau Puschmann , Patricia Garnier
20. World Congress of Soil Science, Jun 2014, Jeju, South Korea. 2014, 20th World congress of soil science. In Commemoration of the 90th Anniversary of the IUSS. Soils Embrace Life and Universe. June 8 -13, 2014 Jeju, Korea
Conference poster hal-01595573v1

Sensitivity of deep soil C to climate change: Mineralization of soil organic matter at different moistures in an Amazonian PODZOSOL

Kevin Potard , Naoise Nunan , Claire Chenu , Yves Lucas
Biogeochemical Interfaces Conference, Oct 2014, Leipzig, Germany. , 129 p., 2014
Conference poster hal-01629855v1

Non-invasive localization of organic matter in soil aggregates using SR-μCT

Stephan Peth , Anneka Mordhorst , Claire Chenu , Daniel Uteau Puschmann , Patricia Garnier
EGU 2014, European Geosciences Union General Assemby, Apr 2014, Vienne, Austria. European Geosciences Union, Geophysical Research Abstracts, 16, 2014, Geophysical Research Abstracts
Conference poster hal-01595574v1

Soil organic mater decompositon – the roles of microbial habitats and of microbial communites

Sabrina Juarez , Naoise Nunan , Valerie Pouteau , Thomas Lerch , Claire Chenu
International symposium on biogeochemical interfaces in soil – toward a comprehensive and mechanistic understanding of soil functions, Oct 2014, Leipzig, Germany. 2014
Conference poster hal-01617678v1

Effects of fresh organic matter accessibility on carbon decomposition by fungi

S. Schmidt , Claire Chenu , Ruth Falconer , Cyril Girardin , Naoise Nunan
Biogeochemical Interfaces Conference, 2014, Leipzig, Germany. , 129 p., 2014
Conference poster hal-01629854v1

The role of fungi for carbon decomposition in soils of different structure and fresh organic matter content

Sonja Schmidt , Claire Chenu , Ruth Falconer , Cyril Girardin , Naoise Nunan
EGU 2014, European Geosciences Union General Assemby, Apr 2014, Vienne, Austria. European Geosciences Union, Geophysical Research Abstracts, 16, 2014, Geophysical Research Abstracts
Conference poster hal-01595591v1

Hierarchy of two drivers of soil organic matter biodegradation. Habitat properties versus habitat community structure

Sabrina Juarez , Naoise Nunan , Valerie Pouteau , Thomas Lerch , Claire Chenu
20. World Congress of Soil Science, Jun 2014, Jeju, South Korea. 2014, 20th World congress of soil science. In Commemoration of the 90th Anniversary of the IUSS. Soils Embrace Life and Universe. June 8 -13, 2014 Jeju, Korea
Conference poster hal-01618406v1

Acid phosphatase activity in the rhizosphere: how a cereal and a legume create local hotspots

Sarah Placella , Josiane Abadie , Gabrielle Daudin , Esther Guillot , Camille Cros
PSP5 2014 - Facing Phosphorus Scarcity, Aug 2014, Montpellier, France. 2014
Conference poster hal-01268824v1

The moisture response of soil microorganisms: old topic, present challenges and new approaches

Claire Chenu , Naoise Nunan , F. Moyano , Patricia Garnier , Olivier Monga
20. World Congress of Soil Science, Jun 2014, Jeju, South Korea. 2014, 20th World congress of soil science. In Commemoration of the 90th Anniversary of the IUSS. Soils Embrace Life and Universe. June 8 -13, 2014 Jeju, Korea
Conference poster hal-01618413v1

Modeling diffusion control on organic matter decomposition in unsaturated soil pore space

Laure Vogel , Valerie Pot-Genty , Patricia Garnier , Laure Vieublé , Naoise Nunan
EGU 2014, European Geosciences Union General Assemby, Apr 2014, Vienne, Austria. European Geosciences Union, Geophysical Research Abstracts, 16, 2014, Geophysical Research Abstracts
Conference poster hal-01595578v1

Hierarchy of two drivers of soil organic matter biodegradation: microbial habitat properties versus microbial communities

Sabrina Juarez , Naoise Nunan , Valerie Pouteau , Thomas Lerch , Claire Chenu
Goldschmidt Conference, Aug 2013, Florence, Italy. 2144 p., 2013
Conference poster hal-01629018v1

Dynamique et distribution spatiale des communautés microbiennes impliquées dans la dégradation de pailles de riz dans un ferralsol

Aimeric Blaud , Thomas Lerch , Naoise Nunan , Tiphaine Chevallier , Claire Chenu
11. Journées d'Etude des Sols (JES), Mar 2012, Versailles, France. 2012, Le sol face aux changements globaux
Conference poster hal-01615935v1

Organic matter distribution in soil fragments from different cropping systems: an approach combining experimental and modelling tools

Timur Burykin , Sabrina Juarez , Claire Chenu , - Crawford, J.W. , Naoise Nunan
4th International Congress EUROSOIL 2012. Soil science for the benefit of mankind and environment, Jul 2012, Bari, Italy. 2696 p., 2012
Conference poster hal-02749472v1

Effet de la structure du sol sur la biodégradation de la matière organique native du sol et sur la matière organique apportée

Sabrina Juarez , Valerie Pouteau , Naoise Nunan , Gérard Bardoux , Wilfred Otten
11. Journées d'Etude des Sols (JES), Mar 2012, Versailles, France. 2012, Le sol face aux changements globaux
Conference poster hal-01615931v1

Pore scale microbial biogeography

Claire Chenu , Léo Ruamps , Julie Leloup , Valerie Pouteau , Naoise Nunan
4. International Congress EUROSOIL 2012, Jul 2012, Bari, Italy. 2012, Soil Science for the benefit of making and environment
Conference poster hal-01616615v1