Olivier Rué
Publications
Publications
LEAP - Learn and Evaluate Affiliation databanks on an online PlatformFROGSDays, FROGS team, Dec 2025, Toulouse, France |
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Analyse croisée de données métabarcoding et métagénomiques sur des microbiotes d'hôtes animauxFROGSdays 2025, équipe FROGS INRAe, Dec 2025, Auzeville Tolosan, France |
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Rétrospective FROGS 2015–2025Symposium FROGSDays, INRAE Toulouse, Dec 2025, Castanet Tolosan, France |
FROGS5 - NewsFROGSDays, FROGS team, Dec 2025, Toulouse, France |
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Metagenomics reveal contrasted and dynamic responses of microbial soil communities to in situ wheat straw amendment in croplands or grasslandsSymposium on Environmental and Agronomical Genomics organisé par France Génomique and the Research Group “Environmental Genomics", Feb 2024, Toulouse, France |
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Microbiome, disease-resistant varieties, and wine quality45. World Congress of Vine and Wine, Oct 2024, Dijon, France. ⟨10.58233/d4ACq14T⟩ |
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Présentation du service d'analyse de donnéesMigale & Vous, May 2024, Jouy-en-Josas (FR), France |
Impact of superchilling technique on the microbiological quality of fresh salmonFoodMicro 2024, ICFMH, Jul 2024, Burgos, Spain |
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News about FROGSPEPI IBIS, Nov 2024, Virtuel, France |
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Drivers of microbial diversity in French Protected designation of Origin (PDO) cheesesIDF World Dairy Science, Oct 2024, Paris, France |
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Variable and core functional microbiota associated with seven Medicago truncatula genotypes12th International PGPR Workshop 2023, May 2023, Toulouse, France |
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Variable and core functional rhizosphere microbiota associated with seven Medicago truncatula genotypesJournée doctorants UMR Agroécologie, Nov 2023, Dijon, France |
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MetaPDOcheese : investigation of the drivers of microbial communities from French PDO milks and cheesesFORUM ON FERMENTED FOODS, COST PIMENTO, May 2023, Lyon, France |
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Élément du portfolio - projet METABARFOODvisite HCERES unité MaIAGE, Dec 2024, Jouy-En-Josas, France. ⟨10.1093/bib/bbab318⟩ |
Transcriptomic and proteomic response of a Liquorilactobacillus mali strain from cider to a lytic phage infectionSociété Francaise Microbiologie, 2021, Nantes, France |
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Evaluation of gyrB amplicon sequencing in comparison to 16S rDNA amplicon sequencing to evaluate intra-species bacterial diversity in food microbiotaJOBIM 20. Journées Ouvertes Biologie Informatique Mathématiques, Jul 2019, Nantes, France |
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Domestication of microbial communities for bread making: insights from a participatory research projectThe 2019 Congress of the European Society for Evolutionary Biology, ESEB, Aug 2019, Turku, Finland |
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Baker’s bread-making practices and house microbiota shape fungal species diversity in french sourdoughsHarlan III, Jun 2019, Montpellier, France |
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Shotgun metagenomics sequencing of the rhizosphere microbiota associated to seven ecotypes of <em>Medicago truncatula</em>Rhizosphere 5, Jul 2019, Saskatoon, Saskatchewan, Canada |
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Is skeletal muscle remodeling associated with gut microbiota signature?6th World Congress on Targeting Microbiota, Oct 2018, Porto, Portugal. pp.1 |
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Deciphering intra-species bacterial diversity using gyrB amplicon sequencingJOBIM 2019, Société Française de Bio-Informatique (SFBI). FRA.; Centre National de la Recherche Scientifique (CNRS). FRA.; Institut Français de Bioinformatique (IFB). FRA., Jul 2019, Nantes, France. 422 p |
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An integrated information system dedicated to oak genomics and geneticsPAG XXVI Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.27 slides |
Functional signatures of soil fungal communities in response to forest tree phenology revealed by metatranscriptome analysis3rd MPItM-Labex ARBRE Workshop, Nov 2018, cologne, Germany |
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Domestication of microbial community in action : a participatory research and multidisciplinary study of sourdough breadSecond Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France |
Annotation of the oak genome sequence and associated bioinformatic resourcesIUFRO Genomics and Forest Tree Genetics, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p |
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Biomechanical evaluation for the identification of free kick determinants in soccerEuropean Workshop On Movement Science, 2009, Lisbon, Portugal |
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A study of the integration by non-homologous end joining (NHEJ) of a trackable DNA cassette with randomly-generated borders into Yarrowia lipolytica genome sheds light on exogenous DNA extremities degradation and confirms the potential of NHEJ-mediated integration for the design of genome-scale insertional mutant libraries in non-conventional yeasts2026 |
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Cell-free genome-wide transcriptomics through machine learning optimization2025 |
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Experimental and methodological framework for the assessment of nucleic acids in airborne microorganisms2024 |
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Extracting and displaying information from the databanks used for metabarcodingBio-Informatique, Biologie Systémique [q-bio.QM]. 2024 |