
Olivier Borkowski
44
Documents
Domaines de recherche
Sciences du Vivant [q-bio]
Compétences
Cell-free
Molecular Biology
Machine Learning
Mathematical modelling
Synthetic Biology
System Biology
Transcriptomics
Microbiology
Publications
Publications
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Celullar Economics in Cell-FreeMaster. Université paris-saclay, France. 2025
Cours
hal-04405950
v2
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Protein synthesis in cell free systemsDoctoral. Biomolecule synthesis: Part I, France. 2024
Cours
hal-04741476
v1
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Cell-free systems: Gene expression outside of the cellDoctoral. France. 2024
Cours
hal-04837424
v1
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Cell-free systems Gene expression outside of the cellEngineering school. AgroParisTech - INRAE - Campus Agro Paris-Saclay, France. 2023
Cours
hal-04336158
v1
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Maximization of production in cell-free systemsBiomanufacturing and micorbiology symposium and workshop, Beckman, Mar 2024, Dublin, France
Communication dans un congrès
hal-04505662
v1
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Study of the molecular mechanisms involved in the use of raffinose, a legume dietary fibre, by bacteria of the intestinal microbiota.Symposium Micalis 2022, Dec 2022, Jouy-en-Josas, France
Communication dans un congrès
hal-04285907
v1
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A large-scale exploration of cell-free compositions to maximize protein production using active learningCell Free Systems Conference, Dec 2019, Boston (MA), United States
Communication dans un congrès
hal-04291932
v1
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A large-scale exploration of cell-free compositions to maximize protein production using reinforcement learningEMBO workshop “Creating is Understand-ing: Synthetic Biology Masters Complexity, EMBO, Sep 2019, Heildelberg, Germany
Communication dans un congrès
hal-04275652
v1
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Relationship between protein production and cell physiologyEUSYNBIOS symposium, Oct 2018, Toulouse, France
Communication dans un congrès
hal-04291918
v1
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Responsible Research and Innovation Exploration of the transcriptional landscapes of culturable and nonculturable bacteria using in vitro transcription emulatorsBioSynSys 2023: Symposium on Synthetic and Systems Biology, Jul 2023, Toulouse, France
Poster de conférence
hal-04279297
v1
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A large-scale exploration of cell-free compositions to maximize protein production using active learningStructural Biology and Chemistry Department days, Dec 2019, paris, France
Poster de conférence
hal-04292156
v1
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Large scale active-learning-guided exploration for in vitro protein production optimizationStructural Biology and Chemistry Department days, Jun 2019, Paris, France
Poster de conférence
hal-03852944
v1
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Cell-free prediction of protein expression costs for growing cellsSynthetic Biology: Engineering, Evolution & Design conference, Jun 2018, Phoenix, United States
Poster de conférence
hal-03852928
v1
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Cell-free prediction of protein expression costsControl Engineering Synthetic Biology Workshop, Jul 2017, London, United Kingdom
Poster de conférence
hal-03852866
v1
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Cell-free prediction of protein expression costs for growing cellsSB7.0: The Seventh International Meeting on Synthetic Biology, Jun 2017, Singapore, Singapore
Poster de conférence
hal-03852886
v1
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Overloaded and stressed: whole-cell considerations for bacterial synthetic biologySBUK 2017, Nov 2017, Manchester, United Kingdom
Poster de conférence
hal-03852899
v1
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Cell-free prediction of protein expression costs for growing cells1st European Congress on Cell-Free Synthetic Biology, Apr 2017, Ascona, Switzerland
Poster de conférence
hal-03852856
v1
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Cell-free prediction of protein expression costs in bacteriaSBUK 2016, Nov 2016, Edinburgh, United Kingdom
Poster de conférence
hal-03852836
v1
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Overloaded and stressed: whole-cell considerations for bacterial synthetic biologySynthetic Biology: Engineering, Evolution & Design conference, Jul 2016, Chicago, United States
Poster de conférence
hal-03852785
v1
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Cell-free prediction of protein expression costs for growing cellsSynthetic Biology: Engineering, Evolution & Design conference, Jun 2015, Boston, United States
Poster de conférence
hal-03852769
v1
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Hands-free control of heterologous gene expression in batch culturese Synthetic Biology: Engineering, Evolution & Design conference, Jul 2014, Los angeles, United States
Poster de conférence
hal-03852754
v1
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Autonomous control of heterologous gene expression in bacteriaSYNBERC symposium, Jul 2014, Berkeley, United States
Poster de conférence
hal-03852736
v1
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Hands-free control of heterologous gene expression in batch culturesStanford BioX, Jul 2013, Stanford, United States
Poster de conférence
hal-03852719
v1
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Growth-rate-dependent protein production in bacteria13th international conference on Systems Biology, 2012, 13th international conference on Systems Biology, Canada
Poster de conférence
hal-03852702
v1
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Hands-free control of heterologous gene expression in batch cultures2022
Pré-publication, Document de travail
hal-03851825
v1
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Active learning leads to highly efficient predictions in cell-free systems2020
Article de blog scientifique
hal-04279308
v1
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Synthetic Biology at the Hand of Cell-Free SystemsAdvances in Synthetic Biology, Springer Singapore, pp. 275-288, 2020, ⟨10.1007/978-981-15-0081-7_16⟩
Chapitre d'ouvrage
hal-03852064
v1
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Growth-rate-dependent protein production in bacteriaMolecular biology. Paris 5, 2013. English. ⟨NNT : ⟩
Thèse
tel-03853024
v1
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