Patricia Siguier

36
Documents

Publications

Publications

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Interplay between the Xer recombination system and the dissemination of antibioresistance in Acinetobacter baumannii

Corentin Blanchais , Carine Pages , Manuel Campos , Kenza Boubekeur , Rachel Contarin et al.

Nucleic Acids Research, 2025, 53 (1), ⟨10.1093/nar/gkae1255⟩

Article dans une revue hal-04888847v1
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A subclass of the IS1202 family of bacterial insertion sequences targets XerCD recombination sites

Patricia Siguier , Philippe Rousseau , François Cornet , Michael Chandler

Plasmid, 2023, 127, pp.102696. ⟨10.1016/j.plasmid.2023.102696⟩

Article dans une revue hal-04285586v1
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Atypical low-copy number plasmid segregation systems, all in one?

Patricia Siguier , Manuel Campos , François Cornet , Jean-Yves Bouet , Catherine Guynet

Plasmid, 2023, 127, pp.102694. ⟨10.1016/j.plasmid.2023.102694⟩

Article dans une revue hal-04134336v1
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Response from Varani et al. to “Comment on ‘the IS6 family, a clinically important group of insertion sequences including IS26’ by Ruth M. Hall”

Alessandro Varani , Susu He , Patricia Siguier , Karen Ross , Michael Chandler

Mobile DNA, 2022, 13 (1), pp.2. ⟨10.1186/s13100-021-00258-8⟩

Article dans une revue hal-04442033v1
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Characterization of the DNA Binding Domain of StbA, A Key Protein of A New Type of DNA Segregation System

Valentin Quebre , Irene del Campo , Ana Cuevas , Patricia Siguier , Jérôme Rech et al.

Journal of Molecular Biology, 2022, 434 (19), pp.167752. ⟨10.1016/j.jmb.2022.167752⟩

Article dans une revue (data paper) hal-03837249v1
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TnpAREP and REP sequences dissemination in bacterial genomes: REP recognition determinants

Alix Corneloup , Anne Caumont-Sarcos , Alain Kamgoue , Brigitte Marty , Phan thai nguyen Le et al.

Nucleic Acids Research, 2021, 49 (12), pp.6982-6995. ⟨10.1093/nar/gkab524⟩

Article dans une revue hal-03408707v1
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Intracellular Positioning Systems Limit the Entropic Eviction of Secondary Replicons Toward the Nucleoid Edges in Bacterial Cells

Julie Dauverd -Girault , Charlène Planchenault , Marine C Pons , Caroline Schiavon , Patricia Siguier et al.

Journal of Molecular Biology, 2020, 432 (3), pp.745-761. ⟨10.1016/j.jmb.2019.11.027⟩

Article dans une revue hal-02392007v1

Bacterial insertion sequences: their genomic impact and diversity.

P. Siguier , E. Gourbeyre , M. Chandler

FEMS Microbiology Reviews, 2014, 38 (5), pp.865-91. ⟨10.1111/1574-6976.12067⟩

Article dans une revue hal-01117881v1
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The Diversity of Prokaryotic DDE Transposases of the Mutator Superfamily, Insertion Specificity, and Association with Conjugation Machineries

Romain Guérillot , Patricia Siguier , Edith Gourbeyre , Michael Chandler , Philippe Glaser

Genome Biology and Evolution, 2014, 6 (2), pp.260-272. ⟨10.1093/gbe/evu010⟩

Article dans une revue hal-01324840v1

ISDra2 transposition in Deinococcus radiodurans is downregulated by TnpB.

Cécile Pasternak , Rémi Dulermo , Bao Ton-Hoang , Robert Debuchy , Patricia Siguier et al.

Molecular Microbiology, 2013, 88 (2), pp.443-55. ⟨10.1111/mmi.12194⟩

Article dans une revue hal-00822757v1

IS200/IS605 family single-strand transposition: mechanism of IS608 strand transfer

S. He , Catherine Guynet , P. Siguier , A.B. Hickman , F. Dyda et al.

Nucleic Acids Research, 2013, 41 (5), pp.3302-3313. ⟨10.1093/nar/gkt014⟩

Article dans une revue hal-00946739v1

Structuring the bacterial genome: Y1-transposases associated with REP-BIME sequences.

B. Ton Hoang , P. Siguier , Y. Quentin , S. Onillon , B. Marty et al.

Nucleic Acids Research, 2012, 40 (8), pp.3596-3609. ⟨10.1093/nar/gkr1198⟩

Article dans une revue hal-00789669v1

Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments.

P. Siguier , A. Varani , Jocelyne Perochon , M. Chandler

Methods in Molecular Biology, 2012, 859, pp.91-103

Article dans une revue hal-00789655v1

ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes

A.M. Varani , P. Siguier , E. Gourbeyre , V. Charneau , M. Chandler

Genome Biology, 2011, 12, pp.R30. ⟨10.1186/gb-2011-12-3-r30⟩

Article dans une revue hal-00667053v1
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Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments.

Florence Wisniewski-Dyé , Kirill Borziak , Gurusahai Khalsa-Moyers , Gladys Alexandre , Leonid O.Sukharnikov et al.

PLoS Genetics, 2011, 7 (12), pp.e1002430. ⟨10.1371/journal.pgen.1002430⟩

Article dans une revue halsde-00724551v1

ISbrowser: an extension of ISfinder for visualizing insertion sequences in prokaryotic genomes.

P. Kichenaradja , P. Siguier , Jocelyne Perochon , M. Chandler

Nucleic Acids Research, 2010, 38, pp.D62-8. ⟨10.1093/nar/gkp947⟩

Article dans une revue hal-00473446v1
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Structure, function, and evolution of the Thiomonas spp. genome.

Florence Arsène-Ploetze , Sandrine Koechler , Marie Marchal , Jean-Yves Coppée , Michael Chandler et al.

PLoS Genetics, 2010, 6 (2), pp.e1000859. ⟨10.1371/journal.pgen.1000859⟩

Article dans une revue hal-00463879v1
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The arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese

Christophe Monnet , Valentin Loux , Jean-Francois Gibrat , Valérie Barbe , Benoit Vacherie et al.

PLoS ONE, 2010, 5 (11), pp.e15489. ⟨10.1371/journal.pone.0015489⟩

Article dans une revue hal-01195440v1

Single-stranded DNA transposition is coupled to host replication.

B. Ton-Hoang , C. Pasternak , P. Siguier , Catherine Guynet , A.B. Hickman et al.

Cell, 2010, 142 (3), pp.398-408. ⟨10.1016/j.cell.2010.06.034⟩

Article dans une revue hal-00557930v1
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The complete genome of Propionibacterium freudenreichii CIRM-BIA1T, a Hardy actinobacterium with food and probiotic applications

Hélène Falentin , Stéphanie-Marie Deutsch , Gwénaël Jan , Valentin Loux , Anne Thierry et al.

PLoS ONE, 2010, 5 (7), pp.1-12. ⟨10.1371/journal.pone.0011748⟩

Article dans une revue hal-01204238v1

Route 66: investigations into the organisation and distribution of the IS66 family of prokaryotic insertion sequences.

E. Gourbeyre , P. Siguier , M. Chandler

Research in Microbiology, 2010, 161, pp.136-143

Article dans une revue hal-00473434v1
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Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti

Arjan de Groot , R. Dulermo , P. Ortet , Laurence Blanchard , P. Guérin et al.

PLoS Genetics, 2009, 5 (3), pp.e1000434. ⟨10.1371/journal.pgen.1000434⟩

Article dans une revue hal-00459812v1

The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons

P. Siguier , Lionel Gagnevin , M. Chandler

Research in Microbiology, 2009, 160, pp.232-241

Article dans une revue hal-00459891v1

IS4 family goes genomic

D. de Palmenaer , P. Siguier , J. Mahillon

BMC Evolutionary Biology, 2008, 23, pp.8-18

Article dans une revue hal-00359856v1

I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses.

J. Filée , P. Siguier , M. Chandler

Trends in Genetics, 2007, 23, pp.10-15

Article dans une revue hal-00141600v1
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A tale of two oxidation states: bacterial colonization of arsenic-rich environments.

Daniel Muller , Claudine Médigue , Sandrine Koechler , Valérie Barbe , ​mohamed Barakat et al.

PLoS Genetics, 2007, 3 (4), pp.e53. ⟨10.1371/journal.pgen.0030053⟩

Article dans une revue hal-00340034v1

I am what I eat and I eat what I am: acquisition of bacterial genes by Giant Viruses.

J. Filee , P. Siguier , M. Chandler

Trends in Genetics, 2007, 23, pp.10-15

Article dans une revue hal-00322956v1

Insertion Sequence diversity in Archaea.

J. Filee , P. Siguier , M. Chandler

Microbiology and Molecular Biology Reviews, 2007, 71, pp.121-157

Article dans une revue hal-00322963v1

Insertion sequence diversity in archaea.

J. Filée , P. Siguier , M. Chandler

Microbiology and Molecular Biology Reviews, 2007, 71, pp.121-157

Article dans une revue hal-00141602v1

ISfinder: the reference centre for bacterial insertion sequences.

Patricia Siguier , Jocelyne Perochon , Jacques Mahillon , Laurent Lestrade , M. Chandler

Nucleic Acids Research, 2006, 34, pp.D32-D36

Article dans une revue hal-00021179v1

Insertion sequences in prokaryotic genomes

Jonathan Filée , M. Chandler , Patricia Siguier

Current Opinion in Microbiology, 2006, 9, pp.526-531

Article dans une revue hal-00119306v1
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The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens

Éric Duchaud , Christophe Rusniok , Lionel Frangeul , Carmen Buchrieser , Alain Givaudan et al.

Nature Biotechnology, 2003, 21 (11), pp.1307-1313. ⟨10.1038/nbt886⟩

Article dans une revue hal-02681540v1

Genome sequence of the plant pathogen Ralstonia solanacearum.

Marcel Salanoubat , S. Genin , François Artiguenave , J. Gouzy , S. Mangenot et al.

Nature, 2002, 415 (6871), pp.497-502. ⟨10.1038/415497a⟩

Article dans une revue hal-00427300v2

The complete genome of Propionibacterium freudenreichii CIRM 1 a hardy actinobacteria with food and probiotic applications

Hélène Falentin , Stéphanie-Marie Deutsch , Sandrine Parayre-Breton , Julien Dherbecourt , Gwénaël Jan et al.

3 International Symposium on Propionibacteria and Bifidobacteria: Dairy and Probiotic, Jun 2010, Oviédo, Spain. , International Journal of Food Microbiology, Volume 149, Issue 1, Pages 1-112 (1 September 2011), 2010, International Journal of Food Microbiology

Poster de conférence hal-01454344v1