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Patricia Siguier

33
Documents

Publications

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Atypical low-copy number plasmid segregation systems, all in one?

Patricia Siguier , Manuel Campos , François Cornet , Jean-Yves Bouet , Catherine Guynet
Plasmid, 2023, 127, pp.102694. ⟨10.1016/j.plasmid.2023.102694⟩
Article dans une revue hal-04134336v1

Characterization of the DNA Binding Domain of StbA, A Key Protein of A New Type of DNA Segregation System

Valentin Quèbre , Irene del Campo , Ana Cuevas , Patricia Siguier , Jérôme Rech
Journal of Molecular Biology, 2022, 434 (19), pp.167752. ⟨10.1016/j.jmb.2022.167752⟩
Article dans une revue hal-03837249v1

TnpAREP and REP sequences dissemination in bacterial genomes: REP recognition determinants

Alix Corneloup , Anne Caumont-Sarcos , Alain Kamgoue , Brigitte Marty , Phan thai nguyen Le
Nucleic Acids Research, 2021, 49 (12), pp.6982-6995. ⟨10.1093/nar/gkab524⟩
Article dans une revue hal-03408707v1
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Intracellular Positioning Systems Limit the Entropic Eviction of Secondary Replicons Toward the Nucleoid Edges in Bacterial Cells

Julie Dauverd -Girault , Charlène Planchenault , Marine Pons , Caroline Schiavon , Patricia Siguier
Journal of Molecular Biology, 2020, 432 (3), pp.745-761. ⟨10.1016/j.jmb.2019.11.027⟩
Article dans une revue hal-02392007v1
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The Diversity of Prokaryotic DDE Transposases of the Mutator Superfamily, Insertion Specificity, and Association with Conjugation Machineries

Romain Guérillot , Patricia Siguier , Edith Gourbeyre , Michael Chandler , Philippe Glaser
Genome Biology and Evolution, 2014, 6 (2), pp.260-272. ⟨10.1093/gbe/evu010⟩
Article dans une revue hal-01324840v1

Bacterial insertion sequences: their genomic impact and diversity.

P. Siguier , E. Gourbeyre , M. Chandler
FEMS Microbiology Reviews, 2014, 38 (5), pp.865-91. ⟨10.1111/1574-6976.12067⟩
Article dans une revue hal-01117881v1

ISDra2 transposition in Deinococcus radiodurans is downregulated by TnpB.

Cécile Pasternak , Rémi Dulermo , Bao Ton-Hoang , Robert Debuchy , Patricia Siguier
Molecular Microbiology, 2013, 88 (2), pp.443-55. ⟨10.1111/mmi.12194⟩
Article dans une revue hal-00822757v1

IS200/IS605 family single-strand transposition: mechanism of IS608 strand transfer

S. He , Catherine Guynet , P. Siguier , A.B. Hickman , F. Dyda
Nucleic Acids Research, 2013, 41 (5), pp.3302-3313. ⟨10.1093/nar/gkt014⟩
Article dans une revue hal-00946739v1

Structuring the bacterial genome: Y1-transposases associated with REP-BIME sequences.

B. Ton Hoang , P. Siguier , Y. Quentin , S. Onillon , B. Marty
Nucleic Acids Research, 2012, 40 (8), pp.3596-3609. ⟨10.1093/nar/gkr1198⟩
Article dans une revue hal-00789669v1

Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments.

P. Siguier , A. Varani , J. Perochon , M. Chandler
Methods in Molecular Biology, 2012, 859, pp.91-103
Article dans une revue hal-00789655v1

ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes

A.M. Varani , P. Siguier , E. Gourbeyre , V. Charneau , M. Chandler
Genome Biology, 2011, 12, pp.R30. ⟨10.1186/gb-2011-12-3-r30⟩
Article dans une revue hal-00667053v1
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Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments.

Florence Wisniewski-Dyé , Kirill Borziak , Gurusahai Khalsa-Moyers , Gladys Alexandre , Leonid O.Sukharnikov
PLoS Genetics, 2011, 7 (12), pp.e1002430. ⟨10.1371/journal.pgen.1002430⟩
Article dans une revue halsde-00724551v1
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The complete genome of Propionibacterium freudenreichii CIRM-BIA1T, a Hardy actinobacterium with food and probiotic applications

Hélène Falentin , Stéphanie-Marie Deutsch , Gwénaël Jan , Valentin Loux , Anne Thierry
PLoS ONE, 2010, 5 (7), pp.1-12. ⟨10.1371/journal.pone.0011748⟩
Article dans une revue hal-01204238v1

Single-stranded DNA transposition is coupled to host replication.

B. Ton-Hoang , C. Pasternak , P. Siguier , Catherine Guynet , A.B. Hickman
Cell, 2010, 142 (3), pp.398-408. ⟨10.1016/j.cell.2010.06.034⟩
Article dans une revue hal-00557930v1

Route 66: investigations into the organisation and distribution of the IS66 family of prokaryotic insertion sequences.

E. Gourbeyre , P. Siguier , M. Chandler
Res. Microbiol., 2010, 161, pp.136-143
Article dans une revue hal-00473434v1
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The arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese

Christophe Monnet , Valentin Loux , Jean-Francois Gibrat , Valérie Barbe , Benoit Vacherie
PLoS ONE, 2010, 5 (11), pp.e15489. ⟨10.1371/journal.pone.0015489⟩
Article dans une revue hal-01195440v1

ISbrowser: an extension of ISfinder for visualizing insertion sequences in prokaryotic genomes.

P. Kichenaradja , P. Siguier , J. Perochon , M. Chandler
Nucleic Acids Research, 2010, 38, pp.D62-8. ⟨10.1093/nar/gkp947⟩
Article dans une revue hal-00473446v1
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Structure, function, and evolution of the Thiomonas spp. genome.

Florence Arsène-Ploetze , Sandrine Koechler , Marie Marchal , Jean-Yves Coppée , Michael Chandler
PLoS Genetics, 2010, 6 (2), pp.e1000859. ⟨10.1371/journal.pgen.1000859⟩
Article dans une revue hal-00463879v1
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Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti

Arjan de Groot , R. Dulermo , P. Ortet , Laurence Blanchard , P. Guérin
PLoS Genetics, 2009, 5 (3), pp.e1000434. ⟨10.1371/journal.pgen.1000434⟩
Article dans une revue hal-00459812v1

The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons

P. Siguier , Lionel Gagnevin , M. Chandler
Res. Microbiol., 2009, 160, pp.232-241
Article dans une revue hal-00459891v1

IS4 family goes genomic

D. de Palmenaer , P. Siguier , J. Mahillon
BMC Evolutionary Biology, 2008, 23, pp.8-18
Article dans une revue hal-00359856v1

I am what I eat and I eat what I am: acquisition of bacterial genes by giant viruses.

J. Filée , P. Siguier , M. Chandler
Trends in Genetics, 2007, 23, pp.10-15
Article dans une revue hal-00141600v1
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A tale of two oxidation states: bacterial colonization of arsenic-rich environments.

Daniel Muller , Claudine Médigue , Sandrine Koechler , Valérie Barbe , ​mohamed Barakat
PLoS Genetics, 2007, 3 (4), pp.e53. ⟨10.1371/journal.pgen.0030053⟩
Article dans une revue hal-00340034v1

Insertion sequence diversity in archaea.

J. Filée , P. Siguier , M. Chandler
Microbiology and Molecular Biology Reviews, 2007, 71, pp.121-157
Article dans une revue hal-00141602v1

Insertion Sequence diversity in Archaea.

J. Filee , P. Siguier , M. Chandler
Microbiology and Molecular Biology Reviews, 2007, 71, pp.121-157
Article dans une revue hal-00322963v1

I am what I eat and I eat what I am: acquisition of bacterial genes by Giant Viruses.

J. Filee , P. Siguier , M. Chandler
Trends in Genetics, 2007, 23, pp.10-15
Article dans une revue hal-00322956v1

ISfinder: the reference centre for bacterial insertion sequences.

Patricia Siguier , Jocelyne Perochon , Jacques Mahillon , Laurent Lestrade , M. Chandler
Nucleic Acids Research, 2006, 34, pp.D32-D36
Article dans une revue hal-00021179v1

Insertion sequences in prokaryotic genomes

Jonathan Filée , M. Chandler , Patricia Siguier
Current Opinion in Microbiology, 2006, 9, pp.526-531
Article dans une revue hal-00119306v1
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The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens

Éric Duchaud , Christophe Rusniok , Lionel Frangeul , Carmen Buchrieser , Alain Givaudan
Nature Biotechnology, 2003, 21 (11), pp.1307-1313. ⟨10.1038/nbt886⟩
Article dans une revue hal-02681540v1

Genome sequence of the plant pathogen Ralstonia solanacearum.

Marcel Salanoubat , S. Genin , François Artiguenave , J. Gouzy , S. Mangenot
Nature, 2002, 415 (6871), pp.497-502. ⟨10.1038/415497a⟩
Article dans une revue hal-00427300v2

The complete genome of Propionibacterium freudenreichii CIRM 1 a hardy actinobacteria with food and probiotic applications

Hélène Falentin , Stéphanie-Marie Deutsch , Sandrine Parayre-Breton , Julien Dherbecourt , Gwénaël Jan
3 International Symposium on Propionibacteria and Bifidobacteria: Dairy and Probiotic, Jun 2010, Oviédo, Spain. , International Journal of Food Microbiology, Volume 149, Issue 1, Pages 1-112 (1 September 2011), 2010, International Journal of Food Microbiology
Poster de conférence hal-01454344v1