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            PRDM9 drives the location and rapid evolution of recombination hotspots in salmonids fish
        
                            
                                                                                                            Marie Raynaud
                                                                ,
                                                                                                                                Paola Sanna
                                                                ,
                                                                                                                                Julien Joseph
                                                                ,
                                                                                                                                Julie A. J. Clément
                                                                ,
                                                                                                                                Yukiko Imai
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-04880059
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Comparative population genomics unveils congruent secondary suture zone in Southwest Pacific Hydrothermal Vents
        
                            
                                                                                                            Adrien Tran Lu Y
                                                                ,
                                                                                                                                Stéphanie Ruault
                                                                ,
                                                                                                                                Claire Daguin-Thiébaut
                                                                ,
                                                                                                                                Anne‐sophie Le Port
                                                                ,
                                                                                                                                Marion Ballenghien
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-04973623
                                            v2
                                    
            
        
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    | 
        
                                                
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            High residual additive genetic variability in a Pacific blue shrimp Litopenaeus stylirostris population after 36 generations of domestication from only 4 estimated founders
        
                            
                                                                                                            Pierrick Haffray
                                                                ,
                                                                                                                                F. Enez
                                                                ,
                                                                                                                                H. Mahunon
                                                                ,
                                                                                                                                B. Lorgeoux
                                                                ,
                                                                                                                                P.P. Blanc
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-05168308
                                            v1
                                    
            
        
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            Divergence and gene flow history at two large chromosomal inversions underlying ecotype differentiation in the long‐snouted seahorse
        
                            
                                                                                                            Laura Meyer
                                                                ,
                                                                                                                                Pierre Barry
                                                                ,
                                                                                                                                Florentine Riquet
                                                                ,
                                                                                                                                Andrew Foote
                                                                ,
                                                                                                                                Anaïs Bordes
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-04788167
                                            v1
                                    
            
        
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    | 
        
                                                 
                        
                     
                                    
     | 
        
        
            Comparative population genomics unveils congruent secondary suture zone in Southwest Pacific Hydrothermal Vents
        
                            
                                                                                                            Adrien Tran Lu Y
                                                                ,
                                                                                                                                Stéphanie Ruault
                                                                ,
                                                                                                                                Claire Daguin-Thiébaut
                                                                ,
                                                                                                                                Anne-Sophie Le Port
                                                                ,
                                                                                                                                Marion Ballenghien
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-05013556
                                            v1
                                    
            
        
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    | 
        
                                                 
                        
                     
                                    
     | 
        
        
            The fate of a polygenic phenotype within the genomic landscapes of introgression in the European seabass hybrid zone
        
                            
                                                                                                            Maeva Leitwein
                                                                ,
                                                                                                                                G Durif
                                                                ,
                                                                                                                                E Delpuech
                                                                ,
                                                                                                                                P Gagnaire
                                                                ,
                                                                                                                                B Ernande
                                                                                            et al.
                            
                 
                            
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                    hal-04705605
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study
        
                            
                                                                                                            Marie Raynaud
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Nicolas Galtier
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03879740
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Inter-Specific Genetic Exchange Despite Strong Divergence in Deep-Sea Hydrothermal Vent Gastropods of the Genus Alviniconcha
        
                            
                                                                                                            Jade Castel
                                                                ,
                                                                                                                                Stéphane Hourdez
                                                                ,
                                                                                                                                Florence Pradillon
                                                                ,
                                                                                                                                Claire Daguin-Thiébaut
                                                                ,
                                                                                                                                Marion Ballenghien
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03771381
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Age-specific survivorship and fecundity shape genetic diversity in marine fishes
        
                            
                                                                                                            Pierre Barry
                                                                ,
                                                                                                                                Thomas Broquet
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03443785
                                            v2
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Introgression between highly divergent sea squirt genomes: an adaptive breakthrough?
        
                            
                                                                                                            Christelle Fraïsse
                                                                ,
                                                                                                                                Alan Le Moan
                                                                ,
                                                                                                                                Camille Roux
                                                                ,
                                                                                                                                Guillaume Dubois
                                                                ,
                                                                                                                                Claire Daguin-Thiébaut
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03817700
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Subtle limits to connectivity revealed by outlier loci within two divergent metapopulations of the deep-sea hydrothermal gastropod Ifremeria nautilei
        
                            
                                                                                                            Adrien Tran Y. Lu
                                                                ,
                                                                                                                                Stephanie Ruault
                                                                ,
                                                                                                                                Claire Daguin-Thiébaut
                                                                ,
                                                                                                                                Jade Castel
                                                                ,
                                                                                                                                Nicolas Bierne
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03669635
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Systematics of European coastal anchovies (genus Engraulis Cuvier)
        
                            
                                                                                                            François Bonhomme
                                                                ,
                                                                                                                                Laura Meyer
                                                                ,
                                                                                                                                Christine Arbiol
                                                                ,
                                                                                                                                Daniela Bănaru
                                                                ,
                                                                                                                                Lilia Bahri‐sfar
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03589330
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Chromosome anchoring in Senegalese sole (Solea senegalensis) reveals sex-associated markers and genome rearrangements in flatfish
        
                            
                                                                                                            Israel Guerrero-Cózar
                                                                ,
                                                                                                                                Jessica Gomez-Garrido
                                                                ,
                                                                                                                                Concha Berbel
                                                                ,
                                                                                                                                Juan Martinez-Blanch
                                                                ,
                                                                                                                                Tyler Alioto
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03443762
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a novel 57k SNP array DlabChip
        
                            
                                                                                                            Ronan Griot
                                                                ,
                                                                                                                                François Allal
                                                                ,
                                                                                                                                Florence Phocas
                                                                ,
                                                                                                                                Sophie Brard-Fudulea
                                                                ,
                                                                                                                                Romain Morvezen
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03544239
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                            
                    
     | 
        
        
            The contribution of ancient admixture to reproductive isolation between European sea bass lineages
        
                            
                                                                                                            Maud Duranton
                                                                ,
                                                                                                                                François Allal
                                                                ,
                                                                                                                                Sophie Valière
                                                                ,
                                                                                                                                Olivier Bouchez
                                                                ,
                                                                                                                                François Bonhomme
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03065745
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                            
                    
     | 
        
        
            Spatial gradients of introgressed ancestry reveal cryptic connectivity patterns in a high gene flow marine fish
        
                            
                                                                                                            Tony Robinet
                                                                ,
                                                                                                                                Valérie Roussel
                                                                ,
                                                                                                                                Karine Cheze
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02925509
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Genetic characterization of cupped oyster resources in Europe using informative single nucleotide polymorphism (SNP) panels
        
                            
                                                                                                            Sylvie Lapègue
                                                                ,
                                                                                                                                Serge Heurtebise
                                                                ,
                                                                                                                                Florence Cornette
                                                                ,
                                                                                                                                Erwan Guichoux
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03065752
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                            
                    
     | 
        
        
            Within-Generation Polygenic Selection Shapes Fitness-Related Traits across Environments in Juvenile Sea Bream
        
                            
                                                                                                            Carine Rey
                                                                ,
                                                                                                                                Audrey M. Darnaude
                                                                ,
                                                                                                                                Franck Ferraton
                                                                ,
                                                                                                                                Bruno Guinand
                                                                ,
                                                                                                                                François Bonhomme
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02887670
                                            v1
                                    
            
        
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    | 
        
                                                
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            Speciation history of European (Anguilla anguilla) and American eel (A. rostrata), analysed using genomic data
        
                            
                                                                                                            Natacha Nikolic
                                                                ,
                                                                                                                                Shenglin Liu
                                                                ,
                                                                                                                                Magnus W Jacobsen
                                                                ,
                                                                                                                                Bjarni Jónsson
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03065758
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Comparative genomics approach to evolutionary process connectivity
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03065737
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Parallel pattern of differentiation at a genomic island shared between clinal and mosaic hybrid zones in a complex of cryptic seahorse lineages
        
                            
                                                                                                            Florentine Riquet
                                                                ,
                                                                                                                                Cathy Liautard‐haag
                                                                ,
                                                                                                                                Lucy Woodall
                                                                ,
                                                                                                                                Carmen Bouza
                                                                ,
                                                                                                                                Patrick Louisy
                                                                                            et al.
                            
                 
                            Evolution - International Journal of Organic Evolution, 2019, 73 (4), pp.817-835.  ⟨10.1111/evo.13696⟩ 
                 Article dans une revue
                    
        
        
            
                
                    hal-02395914
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Development of a large SNPs resource and a low-density SNP array for brown trout (Salmo trutta) population genetics
        
                            
                                                                                                            Keoni Saint-Pé
                                                                ,
                                                                                                                                Maeva Leitwein
                                                                ,
                                                                                                                                Laurence Tissot
                                                                ,
                                                                                                                                Nicolas Poulet
                                                                ,
                                                                                                                                Bruno Guinand
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395980
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            The European sea bass: a key marine fish model in the wild and in aquaculture
        
                            
                                                                                                            Marc Vandeputte
                                                                ,
                                                                                                                                P.-A. Gagnaire
                                                                ,
                                                                                                                                F. Allal
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395941
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                                                 
                        
                     
                                    
     | 
        
        
            Model‐based demographic inference of introgression history in European whitefish species pairs
        
                            
                                                                                                            Clément Rougeux
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395921
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                            
                    
     | 
        
        
            The spatial scale of dispersal revealed by admixture tracts
        
                            
                                                                                                            Maud Duranton
                                                                ,
                                                                                                                                François Bonhomme
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395949
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                            
                    
     | 
        
        
            Using Haplotype Information for Conservation Genomics
        
                            
                                                                                                            Maeva Leitwein
                                                                ,
                                                                                                                                Maud Duranton
                                                                ,
                                                                                                                                Quentin Rougemont
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395119
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                                                 
                        
                     
                                    
     | 
        
        
            Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.
        
                            
                                                                                                            Sara Faggion
                                                                ,
                                                                                                                                Marc Vandeputte
                                                                ,
                                                                                                                                Béatrice Chatain
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                François Allal
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395931
                                            v1
                                    
            
        
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    | 
        
                                                 
                        
                     
                                    
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            Polygenic selection drives the evolution of convergent transcriptomic landscapes across continents within a Nearctic sister species complex
        
                            
                                                                                                            Clément Rougeux
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Kim Praebel
                                                                ,
                                                                                                                                Ole Seehausen
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395961
                                            v1
                                    
            
        
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    | 
        
                                                 
                        
                     
                                    
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            The role of recombination on genome‐wide patterns of local ancestry exemplified by supplemented brook charr populations
        
                            
                                                                                                            Maeva Leitwein
                                                                ,
                                                                                                                                Hugo Cayuela
                                                                ,
                                                                                                                                Anne‐laure Ferchaud
                                                                ,
                                                                                                                                Eric Normandeau
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395970
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                                                 
                        
                     
                                    
     | 
        
        
            Genomic consequences of a recent three-way admixture in supplemented wild brown trout populations revealed by local ancestry tracts
        
                            
                                                                                                            Maeva Leitwein
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Erick Desmarais
                                                                ,
                                                                                                                                Patrick Berrebi
                                                                ,
                                                                                                                                Bruno Guinand
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01922616
                                            v1
                                    
            
        
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    | 
        
                            
                    
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            Analysis of Genome-Wide Differentiation between Native and Introduced Populations of the Cupped Oysters Crassostrea gigas and Crassostrea angulata
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Jean-Baptiste Lamy
                                                                ,
                                                                                                                                Florence Cornette
                                                                ,
                                                                                                                                Serge Heurtebise
                                                                ,
                                                                                                                                Lionel Degremont
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395878
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            The origin and remolding of genomic islands of differentiation in the European sea bass
        
                            
                                                                                                            Maud Duranton
                                                                ,
                                                                                                                                François Allal
                                                                ,
                                                                                                                                Christelle Fraïsse
                                                                ,
                                                                                                                                Nicolas Bierne
                                                                ,
                                                                                                                                François Bonhomme
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01825457
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                                                 
                        
                     
                                    
     | 
        
        
            Genomic and geographic footprints of differential introgression between two divergent fish species (Solea spp.)
        
                            
                                                                                                            Ahmed Souissi
                                                                ,
                                                                                                                                François Bonhomme
                                                                ,
                                                                                                                                Manuel Manchado
                                                                ,
                                                                                                                                Lilia Bahri-Sfar
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395886
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: the effects of sequencing techniques and sampling strategies
        
                            
                                                                                                            Christelle Fraïsse
                                                                ,
                                                                                                                                Camille Roux
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Jonathan Romiguier
                                                                ,
                                                                                                                                Nicolas Faivre
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01882981
                                            v1
                                    
            
        
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     | 
        
        
            Inferring the demographic history underlying parallel genomic divergence among pairs of parasitic and nonparasitic lamprey ecotypes
        
                            
                                                                                                            Quentin Rougemont
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Charles Perrier
                                                                ,
                                                                                                                                Clémence Genthon
                                                                ,
                                                                                                                                Anne-Laure Besnard
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01606314
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                            
                    
     | 
        
        
            Introgressive hybridization and morphological transgression in the contact zone between two Mediterranean Solea species
        
                            
                                                                                                            Ahmed Souissi
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                François Bonhomme
                                                                ,
                                                                                                                                Lilia Bahri-Sfar
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395842
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            A Dense Brown Trout ( Salmo trutta ) Linkage Map Reveals Recent Chromosomal Rearrangements in the Salmo Genus and the Impact of Selection on Linked Neutral Diversity
        
                            
                                                                                                            Maeva Leitwein
                                                                ,
                                                                                                                                Bruno Guinand
                                                                ,
                                                                                                                                Juliette Pouzadoux
                                                                ,
                                                                                                                                Erick Desmarais
                                                                ,
                                                                                                                                Patrick Berrebi
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01922619
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Modeling the Multiple Facets of Speciation-with-Gene-Flow toward Inferring the Divergence History of Lake Whitefish Species Pairs (Coregonus clupeaformis)
        
                            
                                                                                                            Clément Rougeux
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395854
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            RAD-Seq Reveals Patterns of Additive Polygenic Variation Caused by Spatially-Varying Selection in the American Eel (Anguilla rostrata)
        
                            
                                                                                                            Charles Babin
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Scott Pavey
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395860
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                            
                    
     | 
        
        
            Population genomic footprints of fine-scale differentiation between habitats in Mediterranean blue tits
        
                            
                                                                                                            M. Szulkin
                                                                ,
                                                                                                                                P.-A. Gagnaire
                                                                ,
                                                                                                                                N. Bierne
                                                                ,
                                                                                                                                Anne Charmantier
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02326694
                                            v1
                                    
            
        
     | 
                                                                                
    | 
        
                                                
     | 
        
        
            Parallel genetic divergence among coastal-marine ecotype pairs of European anchovy explained by differential introgression after secondary contact
        
                            
                                                                                                            A. Le Moan
                                                                ,
                                                                                                                                P.-A. Gagnaire
                                                                ,
                                                                                                                                F. Bonhomme
                                                                                    
                 
                            
                 Article dans une revue
                    
                    istex
        
        
            
                
                    hal-02395752
                                            v1
                                    
            
        
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    | 
        
                            
                    
     | 
        
        
            Detecting polygenic selection in marine populations by combining population genomics and quantitative genetics approaches
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Oscar Gaggiotti
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395790
                                            v1
                                    
            
        
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    | 
        
                                                
     | 
        
        
            Genome-wide nucleotide diversity of hatchery-reared Atlantic and Mediterranean strains of brown trout Salmo trutta compared to wild Mediterranean populations
        
                            
                                                                                                            M. Leitwein
                                                                ,
                                                                                                                                P. Gagnaire
                                                                ,
                                                                                                                                E. Desmarais
                                                                ,
                                                                                                                                S. Guendouz
                                                                ,
                                                                                                                                Marine Rohmer
                                                                                            et al.
                            
                 
                            
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                    istex
        
        
            
                
                    hal-01922655
                                            v1
                                    
            
        
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            Candidate gene variation in gilthead sea bream reveals complex spatiotemporal selection patterns between marine and lagoon habitats
        
                            
                                                                                                            B. Guinand
                                                                ,
                                                                                                                                C. Chauvel
                                                                ,
                                                                                                                                M. Lechene
                                                                ,
                                                                                                                                J. Tournois
                                                                ,
                                                                                                                                C.S. Tsigenopoulos
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-03046445
                                            v1
                                    
            
        
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            Biodiversity and distribution of leptocephali west of the Mascarene Plateau in the southwestern Indian Ocean
        
                            
                                                                                                            Michael J. Miller
                                                                ,
                                                                                                                                Éric Feunteun
                                                                ,
                                                                                                                                Jun Aoyama
                                                                ,
                                                                                                                                Shun Watanabe
                                                                ,
                                                                                                                                Mari Kuroki
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01192848
                                            v1
                                    
            
        
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            RAD-QTL Mapping Reveals Both Genome-Level Parallelism and Different Genetic Architecture Underlying the Evolution of Body Shape in Lake Whitefish ( Coregonus clupeaformis ) Species Pairs
        
                            
                                                                                                            Martin Laporte
                                                                ,
                                                                                                                                Sean Rogers
                                                                ,
                                                                                                                                Anne-Marie Dion-Côté
                                                                ,
                                                                                                                                Eric Normandeau
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395342
                                            v1
                                    
            
        
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            Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Thomas Broquet
                                                                ,
                                                                                                                                Didier Aurelle
                                                                ,
                                                                                                                                Frédérique Viard
                                                                ,
                                                                                                                                Ahmed Souissi
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01187735
                                            v1
                                    
            
        
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            Do North Atlantic eels show parallel patterns of spatially varying selection?
        
                            
                                                                                                            Malene G Ulrik
                                                                ,
                                                                                                                                José Martín Pujolar
                                                                ,
                                                                                                                                Anne-Laure Ferchaud
                                                                ,
                                                                                                                                Magnus W Jacobsen
                                                                ,
                                                                                                                                Thomas D Als
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395323
                                            v1
                                    
            
        
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            European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation
        
                            
                                                                                                            Mbaye Tine
                                                                ,
                                                                                                                                Heiner Kuhl
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Bruno Louro
                                                                ,
                                                                                                                                Erick Desmarais
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-01922671
                                            v1
                                    
            
        
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            Population genetics of the American eel ( Anguilla rostrata ): F ST = 0 and North Atlantic Oscillation effects on demographic fluctuations of a panmictic species
        
                            
                                                                                                            Caroline Côté
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Vincent Bourret
                                                                ,
                                                                                                                                Guy Verreault
                                                                ,
                                                                                                                                Martin Castonguay
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395299
                                            v1
                                    
            
        
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            Mapping phenotypic, expression and transmission ratio distortion QTL using RAD markers in the Lake Whitefish (Coregonus clupeaformis)
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Eric Normandeau
                                                                ,
                                                                                                                                Scott Pavey
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395307
                                            v1
                                    
            
        
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            The geography of introgression in a patchy environment and the thorn in the side of ecological speciation
        
                            
                                                                                                            Nicolas Bierne
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Patrice David
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395293
                                            v1
                                    
            
        
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            THE GENETIC ARCHITECTURE OF REPRODUCTIVE ISOLATION DURING SPECIATION-WITH-GENE-FLOW IN LAKE WHITEFISH SPECIES PAIRS ASSESSED BY RAD SEQUENCING
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Scott Pavey
                                                                ,
                                                                                                                                Eric Normandeau
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            Evolution - International Journal of Organic Evolution, 2013, 67 (9), pp.2483-2497.  ⟨10.1111/evo.12075⟩ 
                 Article dans une revue
                    
                    istex
        
        
            
                
                    hal-02395314
                                            v1
                                    
            
        
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            Nonparallelism in MHCIIβ diversity accompanies nonparallelism in pathogen infection of lake whitefish ( Coregonus clupeaformis ) species pairs as revealed by next-generation sequencing
        
                            
                                                                                                            Scott Pavey
                                                                ,
                                                                                                                                Maelle Sevellec
                                                                ,
                                                                                                                                William Adam
                                                                ,
                                                                                                                                Eric Normandeau
                                                                ,
                                                                                                                                Fabien Lamaze
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
                    istex
        
        
            
                
                    hal-02395312
                                            v1
                                    
            
        
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            Microsatellite length variation in candidate genes correlates with habitat in the gilthead sea bream Sparus aurata
        
                            
                                                                                                            Lamya Chaoui
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Bruno Guinand
                                                                ,
                                                                                                                                Jean-Pierre Quignard
                                                                ,
                                                                                                                                Costas Tsigenopoulos
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
                    istex
        
        
            
                
                    hal-01922723
                                            v1
                                    
            
        
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            Comparative Genomics Reveals Adaptive Protein Evolution and a Possible Cytonuclear Incompatibility between European and American Eels
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Eric Normandeau
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395279
                                            v1
                                    
            
        
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            RNA/DNA ratios in American glass eels ( Anguilla rostrata ): evidence for latitudinal variation in physiological status and constraints to oceanic migration?
        
                            
                                                                                                            Simon Laflamme
                                                                ,
                                                                                                                                Caroline Côté
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Martin Castonguay
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395286
                                            v1
                                    
            
        
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            The Genetic Consequences of Spatially Varying Selection in the Panmictic American Eel ( Anguilla rostrata )
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Eric Normandeau
                                                                ,
                                                                                                                                Caroline Côté
                                                                ,
                                                                                                                                Michael Møller Hansen
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395275
                                            v1
                                    
            
        
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            Present and past genetic connectivity of the Indo-Pacific tropical eel Anguilla bicolor
        
                            
                                                                                                            Yuki Minegishi
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Jun Aoyama
                                                                ,
                                                                                                                                Pierre Bosc
                                                                ,
                                                                                                                                Eric Feunteun
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
                    istex
        
        
            
                
                    hal-02395267
                                            v1
                                    
            
        
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            WITHIN-POPULATION STRUCTURE HIGHLIGHTED BY DIFFERENTIAL INTROGRESSION ACROSS SEMIPERMEABLE BARRIERS TO GENE FLOW IN ANGUILLA MARMORATA
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Yuki Minegishi
                                                                ,
                                                                                                                                Saliha Zenboudji
                                                                ,
                                                                                                                                Pierre Valade
                                                                ,
                                                                                                                                Jun Aoyama
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-02395262
                                            v1
                                    
            
        
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            Multiplex PCR assay to discriminate four neighbouring species of the Calliptamus genus (Orthoptera: Acrididae) from France
        
                            
                                                                                                            E. Blanchet
                                                                ,
                                                                                                                                L. Blondin
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                A. Foucart
                                                                ,
                                                                                                                                J.M. Vassal
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
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                    hal-02395257
                                            v1
                                    
            
        
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            ASSESSMENT OF CRYPTIC SPECIES DIVERSITY WITHIN BLOOMS AND CYST BANK OF THE ALEXANDRIUM TAMARENSE COMPLEX (DINOPHYCEAE) IN A MEDITERRANEAN LAGOON FACILITATED BY SEMI-MULTIPLEX PCR
        
                            
                                                                                                            Benjamin Genovesi
                                                                ,
                                                                                                                                Mi-Sun Shin-Grzebyk
                                                                ,
                                                                                                                                Daniel Grzebyk
                                                                ,
                                                                                                                                Mohamed Laabir
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    hal-00632294
                                            v1
                                    
            
        
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            Ocean currents drive secondary contact between Anguilla marmorata populations in the Indian Ocean
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Y. Minegishi
                                                                ,
                                                                                                                                J. Aoyama
                                                                ,
                                                                                                                                Elodie Reveillac
                                                                ,
                                                                                                                                Tony Robinet
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
        
        
            
                
                    halsde-00372244
                                            v1
                                    
            
        
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            Development of a key using morphological characters to distinguish south-western Indian Ocean anguillid glass eels
        
                            
                                                                                                            Elodie Reveillac
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Raymonde R. Lecomte-Finiger
                                                                ,
                                                                                                                                Patrick Berrebi
                                                                ,
                                                                                                                                Tony Robinet
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
                    istex
        
        
            
                
                    halsde-00420526
                                            v1
                                    
            
        
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            Natural selection influences AFLP intraspecific genetic variability and introgression patterns in Atlantic eels
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                V. Albert
                                                                ,
                                                                                                                                B. Jónsson
                                                                ,
                                                                                                                                Louis Bernatchez
                                                                                    
                 
                            
                 Article dans une revue
                    
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                    halsde-00373273
                                            v1
                                    
            
        
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            Anguilla marmorata larval migration plasticity as revealed by otolith microstructural analysis
        
                            
                                                                                                            Elodie Reveillac
                                                                ,
                                                                                                                                Éric Feunteun
                                                                ,
                                                                                                                                Patrick Berrebi
                                                                ,
                                                                                                                                Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                Raymonde R. Lecomte-Finiger
                                                                                            et al.
                            
                 
                            Canadian Journal of Fisheries and Aquatic Sciences, 2008, 65 (10), pp.2127-2137.  ⟨10.1139/F08-122⟩ 
                 Article dans une revue
                    
        
        
            
                
                    halsde-00367277
                                            v1
                                    
            
        
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            Co-occurence of two Alexandrium species in Thau Lagoon
        
                            
                                                                                                            Benjamin Genovesi
                                                                ,
                                                                                                                                Estelle Masseret
                                                                ,
                                                                                                                                M.S. Shin-Grzebyk
                                                                ,
                                                                                                                                Daniel Grzebyk
                                                                ,
                                                                                                                                Patrick Berrebi
                                                                                            et al.
                            
                 
                            Harmful Agae News An IOC Newsletter on toxic algae and algal blooms, 2008, 37, pp.1-2 
                 Article dans une revue
                    
        
        
            
                
                    halsde-00451663
                                            v1
                                    
            
        
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            New clues for freshwater eels (Anguilla spp.) migration routes to eastern Madagascar and surrounding islands
        
                            
                                                                                                            Tony Robinet
                                                                ,
                                                                                                                                Elodie Réveillac
                                                                ,
                                                                                                                                M. Kuroki
                                                                ,
                                                                                                                                J. Aoyama
                                                                ,
                                                                                                                                K. Tsukamoto
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
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                    halsde-00284449
                                            v1
                                    
            
        
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            RFLP and semi-multiplex PCR-based identification of four eel species from the south-western Indian Ocean region
        
                            
                                                                                                            Pierre-Alexandre Gagnaire
                                                                ,
                                                                                                                                K. Tsukamoto
                                                                ,
                                                                                                                                J. Aoyama
                                                                ,
                                                                                                                                Y. Minegishi
                                                                ,
                                                                                                                                P. Valade
                                                                                            et al.
                            
                 
                            
                 Article dans une revue
                    
                    istex
        
        
            
                
                    halsde-00300254
                                            v1
                                    
            
        
     |