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RHDV2 outbreak reduces survival and juvenile recruitment, causing European rabbit population collapse
Aurélien Besnard
,
Nicolas Chatelain
,
Rémi Choquet
,
Gilles Holé
,
Yves Léonard
et al.
Article dans une revue
hal-04693238
v1
|
|
Evolution of virulence in emerging epidemics: from theory to experimental evolution and back
Wakinyan Benhamou
,
François Blanquart
,
Marc Choisy
,
Thomas Berngruber
,
Rémi Choquet
et al.
Article dans une revue
hal-04798307
v1
|
|
Phenotypic evolution of SARS-CoV-2: a statistical inference approach
Wakinyan Benhamou
,
Sébastien Lion
,
Rémi Choquet
,
Sylvain Gandon
Article dans une revue
hal-04239260
v1
|
|
Temporal dynamics of antibody level against Lyme disease bacteria in roe deer: Tale of a sentinel?
Valentin Ollivier
,
Rémi Choquet
,
Amandine Gamble
,
Matthieu Bastien
,
Benoit Combes
et al.
Article dans une revue
hal-04187987
v1
|
|
Natal colony influences age-specific movement patterns of the Yellow-legged gull (Larus michahellis)
Charly Souc
,
Nicolas Sadoul
,
Thomas Blanchon
,
Marion Vittecoq
,
Christophe Pin
et al.
Article dans une revue
hal-04123364
v1
|
|
Highly pathogenic avian influenza affects vultures’ movements and breeding output
Olivier Duriez
,
Yohan Sassi
,
Chloé Le Gall-Ladevèze
,
Léa Giraud
,
Robert Straughan
et al.
Article dans une revue
hal-04189620
v1
|
|
Multi‐event capture–recapture models estimate the diagnostic performance of serological tests for myxoma and rabbit haemorrhagic disease viruses in the absence of reference samples
Henrique Pacheco
,
Ana Lopes
,
Juan Bárcena
,
Esther Blanco
,
Joana Abrantes
et al.
Article dans une revue
hal-04839900
v1
|
|
Are behaviour and stress‐related phenotypes in urban birds adaptive?
Aude Caizergues
,
Arnaud Grégoire
,
Rémi Choquet
,
Samuel Perret
,
Anne Charmantier
Article dans une revue
hal-03821524
v1
|
|
The trap of hidden processes: Why ‘quick & dirty’ methods to estimate mortality are not always good. A comment to De Pascalis et al. (2020)
G. Tavecchia
,
Olivier Gimenez
,
R. Choquet
,
A. Rotger
,
D. Oro
et al.
Article dans une revue
hal-03367119
v1
|
|
Sharing wintering grounds does not synchronize annual survival in a high Arctic seabird, the little auk
S Descamps
,
B Merkel
,
H Strøm
,
Rémi Choquet
,
H Steen
et al.
Article dans une revue
hal-03017418
v1
|
|
Non-Invasive Molecular Survey of Sarcoptic Mange in Wildlife: Diagnostic Performance in Wolf Faecal Samples Evaluated by Multi-Event Capture–Recapture Models
Julieta Rousseau
,
Mónia Nakamura
,
Helena Rio-Maior
,
Francisco Álvares
,
Rémi Choquet
et al.
Article dans une revue
hal-04839875
v1
|
|
Evaluating Functional Dispersal in a Nest Ectoparasite and Its Eco-Epidemiological Implications
Amalia Rataud
,
Marlène Dupraz
,
Céline Toty
,
Thomas Blanchon
,
Marion Vittecoq
et al.
Article dans une revue
hal-03388412
v1
|
|
Decrease in social cohesion in a colonial seabird under a perturbation regime
Meritxell Genovart
,
Olivier O. Gimenez
,
Albert Bertolero
,
Rémi Choquet
,
Daniel Oro
et al.
Article dans une revue
hal-03020416
v1
|
|
Arctic climate change and pollution impact little auk foraging and fitness across a decade
Françoise Amélineau
,
David Grémillet
,
Ann Harding
,
Wojciech Walkusz
,
Rémi Choquet
et al.
Article dans une revue
hal-01977919
v1
|
|
Evaluating functional dispersal and its eco-epidemiological implications in a nest ectoparasite
Amalia Rataud
,
Marlène Dupraz
,
Céline Toty
,
Thomas Blanchon
,
Marion Vittecoq
et al.
Article dans une revue
hal-02859934
v1
|
|
Sex‐specific effects of fisheries and climate on the demography of sexually dimorphic seabirds
Dimas Gianuca
,
Stephen C Votier
,
Deborah Pardo
,
Andrew G Wood
,
Richard B Sherley
et al.
Article dans une revue
hal-02161559
v1
|
|
Consequences of past and present harvest management in a declining flyway population of common eiders Somateria mollissima
Rune S. Tjørnløv
,
Roger Pradel
,
Rémi Choquet
,
Thomas Kjaer Christensen
,
Morten Frederiksen
Article dans une revue
hal-02281252
v2
|
|
Impact of long-term behavioural studies in the wild: the blue petrel, Halobaena caerulea, case at Kerguelen
Matthieu Bergès
,
Rémi Choquet
,
Francesco Bonadonna
Article dans une revue
hal-02285159
v1
|
|
R2ucare: An R package to perform goodness-of-fit tests for capture-recapture models
Olivier Gimenez
,
Jean-Dominique Lebreton
,
Rémi Choquet
,
Roger Pradel
Article dans une revue
hal-02329897
v1
|
|
Survival estimates strongly depend on capture-recapture designs in a disturbed environment inducing dispersal
Aurore Ponchon
,
Rémi Choquet
,
Jérémy Tornos
,
Karen Mccoy
,
Torkild Tveraa
et al.
Article dans une revue
hal-02265944
v1
|
|
Haemosporidian infection and co-infection affect host survival and reproduction in wild populations of great tits
R. Pigeault
,
C.-S. Cozzarolo
,
Rémi Choquet
,
M. Strehler
,
T. Jenkins
et al.
Article dans une revue
hal-04536014
v1
|
|
Dermal mycobacteriosis and warming sea surface temperatures are associated with elevated mortality of striped bass in Chesapeake Bay
Maya L. Groner
,
John M. Hoenig
,
Roger Pradel
,
Rémi Choquet
,
Wolfgang K. Vogelbein
et al.
Article dans une revue
hal-01911547
v1
|
|
A general method for estimating seed dormancy and colonisation in annual plants from the observation of existing flora
Matthieu Pluntz
,
Sebastian Le Coz
,
Nathalie Peyrard
,
Roger Pradel
,
Rémi Choquet
et al.
Article dans une revue
hal-01911555
v1
|
|
Mapping and explaining wolf recolonization in France using dynamic occupancy models and opportunistic data
Julie Louvrier
,
Christophe Duchamp
,
Valentin Lauret
,
Eric Marboutin
,
Sarah Cubaynes
et al.
Article dans une revue
hal-01997206
v1
|
|
Using temporary emigration to inform movement behaviour of cave-dwelling invertebrates: a case study of a cave harvestman species
Raluca I Băncilă
,
Roger Pradel
,
Rémi Choquet
,
Rodica Plăiaşu
,
Olivier Gimenez
Article dans une revue
hal-03499394
v1
|
|
Markov‐modulated Poisson processes as a new framework for analysing capture–recapture data
Rémi Choquet
Article dans une revue
hal-04840537
v1
|
|
Disentangling the role of seed bank and dispersal in plant metapopulation dynamics using patch occupancy surveys
Federico Manna
,
Roger Pradel
,
Rémi Choquet
,
Hélène Fréville
,
Pierre-Olivier Cheptou
Article dans une revue
hal-02924171
v1
|
|
Transient state estimation using continuous-time processes applied to opportunistic capture-recapture data
Rémi Choquet
,
Alexandre Garnier
,
Edem Awuve
,
Aurélien Besnard
Article dans une revue
hal-02625449
v1
|
|
Advances in methods for estimating stopover duration for migratory species using capture-recapture data
Sandra Guérin
,
D. Picard
,
Rémi Choquet
,
Aurélien Besnard
Article dans une revue
hal-01601427
v1
|
|
Impact of disease on the survival of three commercially fished species
John M. Hoenig
,
Maya L. Groner
,
Matthew W. Smith
,
Wolfgang K. Vogelbein
,
David M. Taylor
et al.
Article dans une revue
hal-01911558
v1
|
|
Evidence of reduced individual heterogeneity in adult survival of long-lived species
Guillaume Péron
,
Jean-Michel Gaillard
,
Christophe Barbraud
,
Christophe Bonenfant
,
Anne Charmantier
et al.
Article dans une revue
hal-01510958
v1
|
|
Identifying links between vital rates and environment: a toolbox for the applied ecologist
Morten Frederiksen
,
Jean-Dominique Lebreton
,
Roger Pradel
,
Rémi Choquet
,
Olivier Gimenez
Article dans une revue
hal-01911588
v1
|
|
The Osprey reintroduction in Central Italy: dispersal, survival and first breeding data
Flavio Monti
,
Jean Marie Dominici
,
Rémi Choquet
,
Olivier Duriez
,
Giampiero Sammuri
et al.
Article dans une revue
hal-04840515
v1
|
|
Fitting occupancy models with E-SURGE: Hidden Markov modelling of presence-absence data
Olivier Gimenez
,
Laetitia Blanc
,
Aurélien Besnard
,
Roger Pradel
,
Paul F. Doherty
et al.
Article dans une revue
hal-01911593
v1
|
|
Do age-specific survival patterns of wild boar fit current evolutionary theories of senescence?
Marlène Gamelon
,
Stefano Focardi
,
Jean-Michel Gaillard
,
Olivier Gimenez
,
Christophe Bonenfant
et al.
Evolution - International Journal of Organic Evolution, 2014, 68 (12), pp.3636-3643. ⟨10.1111/evo.12519⟩
Article dans une revue
hal-03515114
v1
|
|
Does your species have memory? Analyzing capture-recapture data with memory models
Diana J. Cole
,
Byron J. T. Morgan
,
Rachel S. Mccrea
,
Roger Pradel
,
Olivier Gimenez
et al.
Article dans une revue
hal-01911589
v1
|
|
Methods for studying cause-specific senescence in the wild
David N Koons
,
Marlène Gamelon
,
Jean-Michel Gaillard
,
Lise M Aubry
,
Robert F Rockwell
et al.
Article dans une revue
hal-03282076
v1
|
|
Applications of hidden hybrid Markov/semi-Markov models: from stopover duration to breeding success dynamics
Rémi Choquet
,
Arnaud Béchet
,
Yann Guédon
Article dans une revue
hal-01084498
v1
|
|
Statistical ecology comes of age
Olivier Gimenez
,
Stephen T. Buckland
,
Byron J.T. Morgan
,
Nicolas Bez
,
Sophie Bertrand
et al.
Article dans une revue
hal-01123399
v1
|
|
Inferring seed bank from hidden Markov models: new insights into metapopulation dynamics in plants
Hélène Fréville
,
Rémi Choquet
,
Roger Pradel
,
Pierre-Olivier Cheptou
Article dans une revue
hal-01911603
v1
|
|
A hierarchical distance sampling approach to estimating mortality rates from opportunistic carcass surveillance data
Steve Bellan
,
Olivier Gimenez
,
Rémi Choquet
,
Wayne Getz
Article dans une revue
hal-04840506
v1
|
|
Estimating demographic parameters from capture-recapture data with dependence among individuals within clusters
Rémi Choquet
,
Ana Sanz-Aguilar
,
Blandine Doligez
,
Erika Nogué
,
Roger Pradel
et al.
Article dans une revue
hal-01911601
v1
|
|
A multievent approach to estimating pair fidelity and heterogeneity in state transitions
A. Culina
,
S. Lachish
,
Roger Pradel
,
Rémi Choquet
,
B.C. Sheldon
Article dans une revue
hal-01911595
v1
|
|
Estimating stop over duration in the presence of trap-effects
Rémi Choquet
,
Yann Guédon
,
Aurélien Besnard
,
Matthieu Guillemain
,
Roger Pradel
Article dans une revue
istex
hal-00828839
v1
|
|
Spatial heterogeneity in mortality and its impact on the population dynamics of Eurasian woodcocks
Guillaume Péron
,
Yves Ferrand
,
Rémi Choquet
,
Roger Pradel
,
François Gossmann
et al.
Article dans une revue
hal-03502440
v1
|
|
Comparing the seasonal survival of resident and migratory oystercatchers: carry-over effects of habitat quality and weather conditions
Olivier Duriez
,
Bruno Ens
,
Rémi Choquet
,
Roger Pradel
,
Marcel Klaassen
Article dans une revue
istex
hal-02126293
v1
|
|
Spatial heterogeneity in mortality and its impact on the population dynamics of Eurasian woodcocks
Guillaume Peron
,
Yves Ferrand
,
Rémi Choquet
,
Roger Pradel
,
François Gossmann
et al.
Article dans une revue
hal-02126301
v1
|
|
Exposure of black‐legged kittiwakes to Lyme disease spirochetes: dynamics of the immune status of adult hosts and effects on their survival
Thierry Chambert
,
Vincent Staszewski
,
Elisa Lobato
,
Rémi Choquet
,
Cécile Carrie
et al.
Article dans une revue
hal-04840295
v1
|
|
The Forms and Fitness Cost of Senescence: Age-Specific Recapture, Survival, Reproduction, and Reproductive Value in a Wild Bird Population
Sandra Bouwhuis
,
Rémi Choquet
,
Ben Sheldon
,
Simon Verhulst
Article dans une revue
hal-04840261
v1
|
|
Breeding Experience Might Be a Major Determinant of Breeding Probability in Long-Lived Species: The Case of the Greater Flamingo
Roger Pradel
,
Rémi Choquet
,
A. Bechet
Article dans une revue
hal-00655507
v2
|
|
Towards built-in capture-recapture mixed models in program E-SURGE
Rémi Choquet
,
Olivier Gimenez
Article dans une revue
istex
hal-03515276
v1
|
|
Carry-over effects of spring hunt and climate on recruitment to the natal colony in a migratory species
Cédric Juillet
,
Rémi Choquet
,
Gilles Gauthier
,
Josée Lefebvre
,
Roger Pradel
et al.
Article dans une revue
hal-02126297
v1
|
|
Estimating demographic parameters using hidden process dynamic models
Olivier Gimenez
,
Jean-Dominique Lebreton
,
Jean-Michel Gaillard
,
Rémi Choquet
,
Roger Pradel
Article dans une revue
hal-03499089
v1
|
|
Modeling habitat dynamics accounting for possible misclassification
Sophie Veran
,
Kevin Kleiner
,
Rémi Choquet
,
Jaime Collazo
,
James Nichols
Article dans une revue
istex
hal-04840288
v1
|
|
A hybrid symbolic-numerical method for determining model structure
Rémi Choquet
,
Diana J. Cole
Article dans une revue
istex
hal-04840263
v1
|
|
Simple Estimation and Test Procedures in Capture-Mark-Recapture Mixed Models
Jean-Dominique Lebreton
,
Rémi Choquet
,
Olivier Gimenez
Article dans une revue
istex
hal-03499365
v1
|
|
A Capture–Recapture Model with Double-Marking, Live and Dead Encounters, and Heterogeneity of Reporting Due to Auxiliary Mark Loss
C. Juillet
,
R. Choquet
,
G. Gauthier
,
Roger Pradel
Article dans une revue
hal-02126319
v1
|
|
A semi-Markov model to assess reliably survival patterns from birth to death in free-ranging populations
R. Choquet
,
A. Viallefont
,
L. Rouan
,
K. Gaanoun
,
Jean-Michel Gaillard
Article dans une revue
hal-02299255
v1
|
|
Capture-recapture population growth rate as a robust tool against detection heterogeneity for population management
Lucile Marescot
,
Roger Pradel
,
Christophe Duchamp
,
Sarah Cubaynes
,
Eric Marboutin
et al.
Article dans une revue
hal-02126314
v1
|
|
Importance of Accounting for Detection Heterogeneity When Estimating Abundance: the Case of French Wolves
Sarah Cubaynes
,
Roger Pradel
,
Rémi Choquet
,
Christophe Duchamp
,
Jean-Michel Gaillard
et al.
Article dans une revue
istex
hal-03499369
v1
|
|
Estimating Population Growth Rate From Capture–Recapture Data in Presence of Capture Heterogeneity
Roger Pradel
,
Rémi Choquet
,
Mauricio A Lima
,
Joseph Merritt
,
Laurent Crespin
Article dans une revue
hal-02126326
v1
|
|
Experience-dependent natal philopatry of breeding greater flamingos
Özge Balkiz
,
Arnaud Béchet
,
Lauriane Rouan
,
Rémi Choquet
,
Christophe Germain
et al.
Article dans une revue
hal-02126322
v1
|
|
Individual heterogeneity in studies on marked animals using numerical integration: capture–recapture mixed models
Olivier Gimenez
,
Rémi Choquet
Article dans une revue
hal-04840116
v1
|
|
Capture-recapture models with heterogeneity to study survival senescence in the wild
Guillaume Péron
,
Pierre-André Crochet
,
Rémi Choquet
,
Roger Pradel
,
Jean-Dominique Lebreton
et al.
Article dans une revue
hal-02126325
v1
|
|
Capture-recapture models with heterogeneity to study survival senescence in the wild
Guillaume G. Péron
,
Pierre-André Crochet
,
Rémi Choquet
,
Roger Pradel
,
Jean-Dominique Lebreton
et al.
Oikos, 2010
Article dans une revue
hal-03502442
v1
|
|
Assessing whether mortality is additive using marked animals: a Bayesian state–space modeling approach
Sabrina Servanty
,
Rémi Choquet
,
Eric Baubet
,
Serge Brandt
,
Jean-Michel Gaillard
et al.
Article dans une revue
hal-02662609
v1
|
|
Estimating survival and movements using both live and dead recoveries: a case study of oystercatchers confronted with habitat change
Olivier Duriez
,
Stein A Saether
,
Bruno J Ens
,
Rémi Choquet
,
Roger Pradel
et al.
Article dans une revue
hal-02126329
v1
|
|
A general framework for modeling memory in capture—Recapture data
L. Rouan
,
R. Choquet
,
Roger Pradel
Article dans une revue
hal-02126332
v1
|
|
U-CARE: Utilities for performing goodness of fit tests and manipulating CApture-REcapture data
Rémi Choquet
,
Jean-Dominique Lebreton
,
Anne-Marie Reboulet
,
Roger Pradel
,
Olivier Gimenez
Article dans une revue
hal-03515210
v1
|
|
Automatic generation of multistate capture‐recapture models
Rémi Choquet
Article dans une revue
istex
hal-04840094
v1
|
|
Recruitment processes in long-lived species with delayed maturity: estimating key demographic parameters
Stéphanie Jenouvrier
,
Giacomo Tavecchia
,
Jean-Claude Thibault
,
Rémi Choquet
,
Vincent Bretagnolle
Article dans une revue
istex
hal-00323825
v1
|
|
Is heterogeneity of catchability in capture-recapture studies a mere sampling artifact or a biologically relevant feature of the population?
Laurent Crespin
,
Rémi Choquet
,
Mauricio Lima
,
Merritt J.
,
Roger Pradel
Article dans une revue
istex
hal-02126334
v1
|
|
Estimation of sex-specific survival with imperfect clues about sex
Roger Pradel
,
Lory Maurin-Bernier
,
Olivier Gimenez
,
Meritxell Genovart
,
Rémi Choquet
et al.
Article dans une revue
hal-03515267
v1
|
|
STATE-SPACE MODELLING OF DATA ON MARKED INDIVIDUALS
Olivier Gimenez
,
Vivien Rossi
,
Rémi Choquet
,
Camille Dehais
,
Blaise Doris
et al.
Article dans une revue
hal-03515273
v1
|
|
Larch- and pine-feeding host races of the larch bud moth (Zeiraphera diniana) have cyclic and synchronous population fluctuations
Laurent Dormont
,
Werner Baltensweiler
,
Rémi Choquet
,
Alain Roques
Article dans une revue
istex
hal-02659142
v1
|
|
Estimating clutch frequency in the sea turtle Dermochelys coriacea using stopover duration
Philippe Rivalan
,
Roger Pradel
,
Rémi Choquet
,
Marc Girondot
,
Anne-Caroline Prévot-Julliard
Article dans une revue
hal-02126355
v1
|
|
Larch- and pine-feeding host races of the larch bud moth ( Zeiraphera diniana) have cyclic and synchronous population fluctuations.
Laurent Dormont
,
Laurent Baltensweiler
,
Rémi Choquet
,
Alain Roques
Article dans une revue
istex
hal-03061372
v1
|
|
Efficient profile-likelihood confidence intervals for capture-recapture models
Olivier Gimenez
,
Rémi Choquet
,
Laurent Lamor
,
Paul Scofield
,
David Fletcher
et al.
Article dans une revue
hal-02126356
v1
|
|
Trade-off between current reproductive effort and delay to next reproduction in the leatherback sea turtle
Philippe Rivalan
,
Anne-Caroline Prevot-Julliard
,
Rémi Choquet
,
Roger Pradel
,
Bertrand Jacquemin
et al.
Article dans une revue
istex
hal-02126363
v1
|
|
Methods for investigating parameter redundancy
O. Gimenez
,
A. Viallefont
,
E.A. Catchpole
,
R. Choquet
,
T. Morgan B.J.
Animal Biodiversity and Conservation, 2004, 27, pp.561-572
Article dans une revue
hal-00427547
v1
|
|
Parameter Redundancy in Multistate Capture-Recapture Models
Olivier Gimenez
,
Rémi Choquet
,
Jean-Dominique Lebreton
Article dans une revue
istex
hal-03515251
v1
|