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Rita Rebollo



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A quantitative, genome-wide analysis in Drosophila reveals transposable elements’ influence on gene expression is species-specific

Marie Fablet , Judit Salces-Ortiz , Angelo Jacquet , Bianca Menezes , Corentin Dechaud
Genome Biology and Evolution, 2023, 15 (9), pp.evad160. ⟨10.1093/gbe/evad160⟩
Journal articles hal-04195964v1
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Transcriptomic-based selection of reference genes for quantitative real-time PCR in an insect endosymbiotic model

Agnès Vallier , Elisa Dell’aglio , Mariana Galvão Ferrarini , Ophélie Hurtado , Carole Vincent-Monégat
Frontiers in Ecology and Evolution, 2023, 11, pp.1152183. ⟨10.3389/fevo.2023.1152183⟩
Journal articles hal-04154026v1
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Endosymbiont-containing germarium transcriptional survey in a cereal weevil depicts downregulation of immune effectors at the onset of sexual maturity

Mariana Galvão Ferrarini , Agnès Vallier , Elisa Dell’aglio , Séverine Balmand , Carole Vincent-Monégat
Frontiers in Physiology, 2023, 14, pp.1142513. ⟨10.3389/fphys.2023.1142513⟩
Journal articles hal-04045330v1
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A comparative study revealed hyperspectral imaging as a potential standardized tool for the analysis of cuticle tanning over insect development

Virginie Lacotte , Elisa Dell’aglio , Sergio Peignier , Fadéla Benzaoui , Abdelaziz Heddi
Heliyon, 2023, 9 (3), pp.e13962. ⟨10.1016/j.heliyon.2023.e13962⟩
Journal articles hal-04045314v1
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ChimeraTE: a pipeline to detect chimeric transcripts derived from genes and transposable elements

Daniel Oliveira , Marie Fablet , Anaïs Larue , Agnès Vallier , Claudia Carareto
Nucleic Acids Research, inPress, ⟨10.1093/nar/gkad671⟩
Journal articles hal-04195961v1
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Weevil Carbohydrate Intake Triggers Endosymbiont Proliferation: A Trade-Off between Host Benefit and Endosymbiont Burden

Elisa Dell’aglio , Virginie Lacotte , Sergio Peignier , Isabelle Rahioui , Fadéla Benzaoui
Journal articles hal-04045309v1

Coordination of host and endosymbiont gene expression governs endosymbiont growth and elimination in the cereal weevil Sitophilus spp

Mariana Galvão Ferrarini , Agnès Vallier , Carole Vincent-Monégat , Elisa Dell’aglio , Benjamin Gillet
Journal articles hal-04281528v1
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Efficient compartmentalization in insect bacteriomes protects symbiotic bacteria from host immune system

Mariana Galvão Ferrarini , Elisa Dell’aglio , Agnès Vallier , Severine Balmand , Carole Vincent-Monégat
Microbiome, 2022, 10 (1), pp.156. ⟨10.1186/s40168-022-01334-8⟩
Journal articles hal-03839252v1
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Chemotherapy-induced transposable elements activate MDA5 to enhance haematopoietic regeneration

Thomas Clapes , Aikaterini Polyzou , Pia Prater , A Sagar , Antonio Morales-Hernández
Nature Cell Biology, 2021, 23 (7), ⟨10.1038/s41556-021-00707-9⟩
Journal articles hal-03285370v1
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The transposable element-rich genome of the cereal pest Sitophilus oryzae

Nicolas Parisot , Carlos Vargas-Chávez , Clément Goubert , Patrice Baa-Puyoulet , Séverine Balmand
BMC Biology, 2021, 19 (1), pp.241. ⟨10.1186/s12915-021-01158-2⟩
Journal articles hal-03627264v1
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Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis

Mariana G Ferrarini , Avantika Lal , Rita Rebollo , Andreas J Gruber , Andrea Guarracino
Communications Biology, 2021, 4 (1), ⟨10.1038/s42003-021-02095-0⟩
Journal articles hal-03237937v1
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Inter-Strain Epigenomic Profiling Reveals a Candidate IAP Master Copy in C3H Mice

Rita Rebollo , Mariana Galvao Ferrarini , Liane Gagnier , Ying Zhang , Ardian Ferraj
Viruses, 2020, 12 (7), pp.783. ⟨10.3390/v12070783⟩
Journal articles hal-02919047v1
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Dynamic Interactions Between the Genome and an Endogenous Retrovirus: Tirant in Drosophila simulans Wild-Type Strains

Marie Fablet , Angelo Jacquet , Rita Rebollo , Annabelle A. Haudry , Carine Rey
G3, 2019, 9 (3), pp.855-865. ⟨10.1534/g3.118.200789⟩
Journal articles hal-02004384v1

On the role of H3.3 in retroviral silencing

Gernot Wolf , Rita Rebollo , Mohammad M. Karimi , Adam D. Ewing , Rui Kamada
Nature, 2017, 548 (7665), pp.E1-E6. ⟨10.1038/nature23277⟩
Journal articles hal-01594928v1

Distinct isoform of FABP7 revealed by screening for retroelement-activated genes in diffuse large B-cell lymphoma

Frances E. Lock , Rita Rebollo , Katharine Miceli-Royer , Liane Gagnier , Sabrina Kuah
Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (34), pp.E3534-E3543. ⟨10.1073/pnas.1405507111⟩
Journal articles hal-02631106v1
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A snapshot of histone modifications within transposable elements in Drosophila wild type strains.

Rita Rebollo , Béatrice Horard , Flora Begeot , Marion Delattre , Eric Gilson
PLoS ONE, 2012, 7 (9), pp.1-7. ⟨10.1371/journal.pone.0044253⟩
Journal articles hal-00850321v1

Transposable elements: an abundant and natural source of regulatory sequences for host genes

Rita Rebollo , Mark T. Romanish , Dixie L. Mager
Annual Review of Genetics, 2012, 46, pp.21-42. ⟨10.1146/annurev-genet-110711-155621⟩
Journal articles hal-02652491v1
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Epigenetic interplay between mouse endogenous retroviruses and host genes

Rita Rebollo , Katharine Miceli-Royer , Ying Zhang , Sharareh Farivar , Liane Gagnier
Genome Biology, 2012, 13 (10), pp.1-15. ⟨10.1186/gb-2012-13-10-r89⟩
Journal articles hal-02649122v1
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Transposable elements: not as quiet as a mouse

Rita Rebollo , Ying Zhang , Dixie L. Mager
Genome Biology, 2012, 13 (6), ⟨10.1186/gb-2012-13-6-159⟩
Journal articles hal-02652763v1

tirant, a newly discovered active endogenous retrovirus in Drosophila simulans.

Abdou Akkouche , Rita Rebollo , Nelly Burlet , Caroline Esnault , Sonia Martinez
Journal of Virology, 2012, 86 (7), pp.3675-3681. ⟨10.1128/JVI.07146-11⟩
Journal articles hal-00763499v1
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C-GATE - catalogue of genes affected by transposable elements

Rita Rebollo , Sharareh Farivar , Dixie L. Mager
Mobile DNA, 2012, 3 (1), pp.1-5. ⟨10.1186/1759-8753-3-9⟩
Journal articles hal-02645414v1

A comparative analysis of the amounts and dynamics of transposable elements in natural populations of Drosophila melanogaster and Drosophila simulans.

Cristina Vieira , Marie Fablet , Emmanuelle Lerat , Matthieu Boulesteix , Rita Rebollo
Journal of Environmental Radioactivity, 2012, 113, pp.83-86. ⟨10.1016/j.jenvrad.2012.04.001⟩
Journal articles hal-00763500v1
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Placenta-specific expression of the interleukin-2 (IL-2) receptor beta subunit from an endogenous retroviral promoter

Carla J. Cohen , Rita Rebollo , Sonja Babovic , Elizabeth L. Dai , Wendy P. Robinson
Journal of Biological Chemistry, 2011, 286 (41), pp.35543-35552. ⟨10.1074/jbc.M111.227637⟩
Journal articles hal-02649119v1
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Retrotransposon-induced heterochromatin spreading in the mouse revealed by insertional polymorphisms

Rita Rebollo , Mohammad M. Karimi , Misha Bilenky , Liane Gagnier , Katharine Miceli-Royer
PLoS Genetics, 2011, 7 (9), pp.1-14. ⟨10.1371/journal.pgen.1002301⟩
Journal articles hal-02651240v1

Jumping genes and epigenetics: Towards new species.

Rita Rebollo , Béatrice Horard , Benjamin Hubert , Cristina Vieira
Gene, 2010, 454 (1-2), pp.1-7. ⟨10.1016/j.gene.2010.01.003⟩
Journal articles hal-00850384v1

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila

M. Fablet , E. Lerat , R. Rebollo , B. Horard , N. Burlet
FASEB Journal, 2009, 23, pp.54-62
Journal articles hal-00428323v1

Genomic environment influences the dynamics of the tirant LTR retrotransposon in Drosophila.

Marie Fablet , Emmanuelle Lerat , Rita Rebollo , Béatrice Horard , Nelly Burlet
FASEB Journal, 2009, 23 (5), pp.1482-9. ⟨10.1096/fj.08-123513⟩
Journal articles hal-00850396v1
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Losing helena: The extinction of a drosophila line-like element

Rita Rebollo , Emmanuelle Lerat , Liliana Lopez Kleine , Christian Biémont , Cristina Vieira
BMC Genomics, 2008, 9, pp.1-11. ⟨10.1186/1471-2164-9-149⟩
Journal articles hal-02668006v1

The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes

Marie Fablet , Rita Rebollo , Christian Biémont , Cristina Vieira
Gene, 2007, 390 (1-2), pp.84-91. ⟨10.1016/j.gene.2006.08.005⟩
Journal articles hal-02665818v1

Methylated DNA immunoprecipitation analysis of mammalian endogenous retroviruses

Rita Rebollo , Dixie L. Mager
Transposons and Retrotransposons : Methods and protocols, 1400, Humana Press, 2016, Methods in Molecular Biology, 978-1-4939-3370-9 978-1-4939-3372-3. ⟨10.1007/978-1-4939-3372-3_23⟩
Book sections hal-02794282v1