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Multi‐scale characterisation of cold response reveals immediate and long‐term impacts on cell physiology up to seed composition in sunflower
Jean Michel Louis Leconte
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Marco Moroldo
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Nicolas Blanchet
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Gabriela Bindea
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Sébastien Carrere
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Article dans une revue
hal-04612113
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Comparative transcriptomics reveals a highly polymorphic Xanthomonas HrpG virulence regulon
Thomas Quiroz Monnens
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Brice Roux
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Sebastien Cunnac
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Erika Charbit
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Sébastien Carrere
et al.
Article dans une revue
hal-04670942
v1
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A fully sequenced collection of homozygous EMS mutants for forward and reverse genetic screens in Arabidopsis thaliana
Sébastien Carrère
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Jean‐marc Routaboul
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Article dans une revue
hal-04372773
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First whole genome assembly and annotation of a European common bean cultivar using PacBio HiFi and Iso-Seq data
Sébastien Carrère
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Baptiste Mayjonade
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David Lalanne
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Sylvain Gaillard
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Jérôme Verdier
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Article dans une revue
(data paper)
hal-04089846
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Comparative phylotranscriptomics reveals ancestral and derived root nodule symbiosis programmes
Cyril Libourel
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Jean Keller
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Lukas Brichet
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Anne-Claire Cazalé
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Sébastien Carrère
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Article dans une revue
hal-04187925
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Corrigendum: Investigating genetic diversity within the most abundant and prevalent non-pathogenic leaf-associated bacteria interacting with Arabidopsis thaliana in natural habitats
Daniela Ramírez-Sánchez
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Rémi Duflos
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Elodie Belmonte
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Article dans une revue
hal-04505635
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A high diversity of non-target site resistance mechanisms to acetolactate-synthase (ALS) inhibiting herbicides has evolved within and among field populations of common ragweed (Ambrosia artemisiifolia L.)
Ingvild Loubet
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Lucie Meyer
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Séverine Michel
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Fanny Pernin
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Sébastien Carrere
et al.
Article dans une revue
hal-04288942
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Investigating genetic diversity within the most abundant and prevalent non-pathogenic leaf-associated bacteria interacting with Arabidopsis thaliana in natural habitats
Daniela Ramírez-Sánchez
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Chrystel Gibelin-Viala
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Baptiste Mayjonade
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Rémi Duflos
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Elodie Belmonte
et al.
Article dans une revue
hal-03806728
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Genome‐wide identification of fitness determinants in the Xanthomonas campestris bacterial pathogen during early stages of plant infection
Julien S Luneau
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Maël Baudin
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Thomas Quiroz Monnens
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Sébastien Carrère
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Olivier Bouchez
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Article dans une revue
hal-03744702
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DNA demethylation and hypermethylation are both required for late nodule development in Medicago
Yann Pecrix
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Sandra Moreau
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Olivier Bouchez
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Sébastien Carrere
et al.
Article dans une revue
hal-03728475
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MtEFD and MtEFD2: Two transcription factors with distinct neofunctionalization in symbiotic nodule development
Marie-Françoise Jardinaud
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Justine Fromentin
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Marie-Christine Auriac
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Sandra Moreau
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Yann Pecrix
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Article dans une revue
hal-03728310
v1
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Genome Sequences of 17 Strains from Eight Races of Xanthomonas campestris pv. campestris
Caroline Bellenot
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Sébastien Carrère
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Carine Gris
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Laurent Noël
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Matthieu Arlat
Article dans une revue
hal-03842450
v1
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Symbiotic Nodule Development and Efficiency in the Medicago truncatula Mtefd-1 Mutant Is Highly Dependent on Sinorhizobium Strains
Marie‐françoise Jardinaud
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Sebastien Carrere
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Benjamin Gourion
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Pascal Gamas
Article dans une revue
hal-03847531
v1
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Xanthomonas transcriptome inside cauliflower hydathodes reveals bacterial virulence strategies and physiological adaptations at early infection stages
Julien Luneau
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Aude Cerutti
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Brice Roux
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Sébastien Carrère
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Marie‐françoise Jardinaud
et al.
Article dans une revue
hal-03580527
v1
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Pathogen-derived mechanical cues potentiate the spatio-temporal implementation of plant defense
Ophélie Léger
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Frédérick Garcia
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Mehdi Khafif
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Sébastien Carrere
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Nathalie Leblanc-Fournier
et al.
Article dans une revue
hal-03957987
v2
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Imaging Matrix-Assisted Laser Desorption/Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of oxaliplatin derivatives in human tissue sections
Justine Ferey
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Marion Larroque
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Isabelle Schmitz-Afonso
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Johann Le Maître
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Olivia Sgarbura
et al.
Article dans une revue
hal-03400641
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Population genomics of apricots unravels domestication history and adaptive events
Alexis Groppi
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Shuo Liu
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A. Cornille
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David Tricon
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Quynh Trang Bui
et al.
Article dans une revue
hal-03282504
v1
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MtExpress, a Comprehensive and Curated RNAseq-based Gene Expression Atlas for the Model Legume Medicago truncatula
Sebastien Carrere
,
Jerome Verdier
,
Pascal Gamas
Article dans une revue
hal-03420304
v1
|
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High-quality genome sequence of white lupin provides insight into soil exploration and seed quality
Bárbara Hufnagel
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André Marques
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Alexandre Soriano
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Laurence Marquès
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Fanchon Divol
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Article dans une revue
hal-04721448
v1
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LeGOO: An Expertized Knowledge Database For The Model Legume Medicago truncatula
Sébastien Carrere
,
Marion Verdenaud
,
Clare Gough
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Jerome Gouzy
,
Pascal Gamas
Article dans une revue
hal-02290862
v1
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Common bean resistance to Xanthomonas is associated with upregulation of the salicylic acid pathway and downregulation of photosynthesis
Justine Foucher
,
Mylène Ruh
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Anne Preveaux
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Sébastien Carrere
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Sandra Pelletier
et al.
Article dans une revue
hal-02945634
v1
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Toward a comprehensive study for multielemental quantitative LA-ICP MS bioimaging in soft tissues
Carine Arnaudguilhem
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Marion Larroque
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Olivia Sgarbura
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Dominique Michau
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François Quenet
et al.
Article dans une revue
hal-03019255
v1
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High-quality genome sequence of white lupin provides insight into soil exploration and seed quality
Barbara Hufnagel
,
André Marques
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Alexandre Soriano
,
Laurence Marquès
,
Fanchon Divol
et al.
Article dans une revue
hal-02460008
v1
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EffectorK, a comprehensive resource to mine for Ralstonia, Xanthomonas, and other published effector interactors in the Arabidopsis proteome
Manuel Gonzalez‐fuente
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Sébastien Carrere
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Dario Monachello
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Benjamin G Marsella
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Anne‐claire Cazalé
et al.
Article dans une revue
hal-03052440
v1
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Pangenomic type III effector database of the plant pathogenic Ralstonia spp.
Cyrus Sabbagh
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Sébastien Carrere
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Fabien Lonjon
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Fabienne Vailleau
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Alberto P. Macho
et al.
Article dans une revue
hal-02623550
v1
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A receptor-like kinase enhances sunflower resistance to Orobanche cumana
Pauline Duriez
,
Sonia Vautrin
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Marie-Christine Auriac
,
Julia Bazerque
,
Marie-Claude Boniface
et al.
Article dans une revue
hal-02626477
v1
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The Rosa genome provides new insights into the domestication of modern roses
Olivier Raymond
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Jerome Gouzy
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Jérémy Just
,
Hélène Badouin
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Marion Verdenaud
et al.
Article dans une revue
hal-01798003
v1
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High conservation of the transcriptional response to acetolactate-synthase-inhibiting herbicides across plant species
Christophe Délye
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A. Duhoux
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J. A. C. Gardin
,
Jerome Gouzy
,
Sébastien Carrere
Article dans une revue
hal-02628831
v1
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In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana
Claudia Bartoli
,
Léa Frachon
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Matthieu Barret
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Mylène Rigal
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Carine Huard-Chauveau
et al.
Article dans une revue
hal-02373577
v1
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Comparison of GWAS models to identify non-additive genetic control of flowering time in sunflower hybrids
Fanny Bonnafous
,
Ghislain Fiévet
,
Nicolas Blanchet
,
Marie-Claude Boniface
,
Sébastien Carrere
et al.
Article dans une revue
hal-02628425
v1
|
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Whole-genome landscape of Medicago truncatula symbiotic genes
Yann Pecrix
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S. Evan Staton
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Erika Sallet
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Christine Lelandais-Brière
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Sandra Moreau
et al.
Article dans une revue
hal-04779324
v1
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A Genomic Map of Climate Adaptation in Arabidopsis thaliana at a Micro-Geographic Scale
Léa Frachon
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Claudia Bartoli
,
Sebastien Carrere
,
Olivier Bouchez
,
Adeline Chaubet
et al.
Article dans une revue
hal-02373598
v1
|
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Two ancestral genes shaped the Xanthomonas campestris TAL effector gene repertoire
Nicolas Denancé
,
Boris Szurek
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Erin L Doyle
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Emmanuelle Lauber
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Lisa Fontaine-Bodin
et al.
Article dans une revue
hal-02090739
v1
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Genomic Prediction of Sunflower Hybrids Oil Content
Brigitte Mangin
,
Fanny Bonnafous
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Nicolas Blanchet
,
Marie-Claude Boniface
,
Emmanuelle Bret-Mestries
et al.
Article dans une revue
hal-02624895
v1
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Genetic control of plasticity of oil yield for combined abiotic stresses using a joint approach of crop modeling and genome-wide association
Brigitte Mangin
,
Pierre Casadebaig
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Eléna Cadic
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Nicolas Blanchet
,
Marie-Claude Boniface
et al.
Article dans une revue
hal-01608380
v1
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Genetic control of plasticity of oil yield for combined abiotic stresses using a joint approach of crop modelling and genome‐wide association
Brigitte Mangin
,
Pierre Casadebaig
,
Eléna Cadic
,
Nicolas Blanchet
,
Marie-Claude Boniface
et al.
Article dans une revue
hal-04779348
v1
|
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The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution
Hélène Badouin
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Jerome Gouzy
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Christopher Grassa
,
Florent Murat
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S Evan Staton
et al.
Article dans une revue
hal-01603287
v1
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Intermediate degrees of synergistic pleiotropy drive adaptive evolution in ecological time
Léa Frachon
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Cyril Libourel
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Romain Villoutreix
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Sébastien Carrere
,
Cédric Glorieux
et al.
Article dans une revue
hal-02622028
v1
|
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myGenomeBrowser: building and sharing your own genome browser
Sébastien Carrere
,
Jerome Gouzy
Article dans une revue
hal-01608904
v1
|
|
Transcriptional markers enable identification of rye-grass (Lolium sp.) plants with non-target -site-based resistance to herbicides inhibiting acetolactate-synthase
Arnaud Duhoux
,
Sebastien Carrere
,
Christophe Délye
Article dans une revue
hal-01607524
v1
|
|
Genomic Prediction of Sunflower Hybrids Oil Content
Brigitte Mangin
,
Fanny Bonnafous
,
Nicolas Blanchet
,
Marie-Claude Boniface
,
Emmanuelle Bret-Mestries
et al.
Article dans une revue
hal-04779355
v1
|
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High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero
Ebrahim Osdaghi
,
Natalia Forero Serna
,
Stéphanie Bolot
,
Marion Fischer-Le Saux
,
Marie-Agnès Jacques
et al.
Article dans une revue
hal-01905579
v1
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Draft genome sequences of five Pseudomonas syringae pv. actinidifoliorum strains isolated in France
Amandine Cunty
,
Sophie Cesbron
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Martial Briand
,
Sebastien Carrere
,
Françoise Poliakoff
et al.
Article dans une revue
hal-01415259
v1
|
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Comparative analysis of expressed CRN and RXLR effectors from two <em>Plasmopara</em> species causing grapevine and sunflower downy mildew
Pedro-Felipe Mestre Artigues
,
Sebastien Carrere
,
Jerome Gouzy
,
Marie-Christine Piron
,
Denis D. Tourvieille de Labrouhe
et al.
Article dans une revue
hal-02640035
v1
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High-Quality Draft Genome Sequences of Two Xanthomonas Pathotype Strains Infecting Aroid Plants
I. Robène
,
Stéphanie S. Bolot
,
Olivier Pruvost
,
Matthieu Arlat
,
Laurent Noel
et al.
Article dans une revue
hal-02629928
v1
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Effector polymorphisms of the sunflower downy mildew pathogen <em>Plasmopara Halstedii</em> and their use to identify pathotypes from field isolates
Quentin Gascuel
,
Amandine A. Bordat
,
Erika Sallet
,
Nicolas Pouilly
,
Sebastien Carrere
et al.
Article dans une revue
hal-02632845
v1
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Using Ecology, Physiology, and Genomics to Understand Host Specificity in Xanthomonas
Marie-Agnès Jacques
,
Matthieu Arlat
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Alice Boulanger
,
Tristan Boureau
,
Sébastien Carrère
et al.
Article dans une revue
(article de synthèse)
hal-03383508
v1
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Robotic Versus Laparoscopic Total Mesorectal Excision (TME) for Sphincter-Saving Surgery: Is There Any Difference in the Transanal TME Rectal Approach?
Pierre-Emmanuel Colombo
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Martin Bertrand
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Mathias Alline
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Eric Boulay
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Anne Mourregot
et al.
Article dans une revue
hal-01908670
v1
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Standardized single docking, four arms and fully robotic proctectomy for rectal cancer: the key points are the ports and arms placement
Martin Marie Bertrand
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Pierre-Emmanuel Colombo
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Anne Mourregot
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Drissa Traore
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Sebastien Carrere
et al.
Article dans une revue
hal-01908899
v1
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Full genome sequence analysis of two isolates reveals a novel Xanthomonas species close to the sugarcane pathogen Xanthomonas albilineans
Isabelle Pieretti
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Stéphane Cociancich
,
Stéphanie Bolot
,
Sébastien Carrere
,
Alexandre Morisset
et al.
Article dans une revue
(article de synthèse)
hal-01594241
v1
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Draft Genome Sequence ofXanthomonas translucenspv. graminis Pathotype Strain CFBP 2053
Céline Pesce
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Stéphanie Bolot
,
Edwige Berthelot
,
Claude Bragard
,
Sebastien Cunnac
et al.
Article dans une revue
hal-01594261
v1
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Whole-genome sequencing of 10<em> Pseudomonas syringae</em> strains representing different host range spectra
Claudia Bartoli
,
Sebastien Carrere
,
Jay Ram Lamichhane
,
Leonardo Varvaro
,
Cindy E. Morris
Article dans une revue
hal-02632911
v1
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Genome Sequences of the Race 1 and Race 4 Xanthomonas campestris pv. campestris Strains CFBP 1869 and CFBP 5817.
Stéphanie Bolot
,
Aude Cerutti
,
Sebastien Carrere
,
Matthieu Arlat
,
Marion Le Saux
et al.
Article dans une revue
hal-01455989
v1
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RNA-Seq analysis of rye-grass transcriptomic response to an herbicide inhibiting acetolactate-synthase identifies transcripts linked to non-target-site-based resistance
Arnaud Duhoux
,
Sebastien Carrere
,
Jerome Gouzy
,
Ludovic Bonin
,
Christophe C. Delye
Article dans une revue
hal-02635561
v1
|
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ALOMYbase, a resource to investigate non-target-site-based resistance to herbicides inhibiting acetolactate-synthase (ALS) in the major grass weed <em>Alopecurus myosuroides</em> (black-grass)
Jeanne Aude Christiane Gardin
,
Jerome Gouzy
,
Sebastien Carrere
,
Christophe C. Delye
Article dans une revue
hal-02635227
v1
|
|
High-Quality Draft Genome Sequence of the Xanthomonas translucens pv. cerealis Pathotype Strain CFBP 2541.
Céline Pesce
,
Stéphanie Bolot
,
Sébastien Cunnac
,
Perrine Portier
,
Marion Le Saux
et al.
Article dans une revue
hal-01209993
v1
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Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome.
Brice Roux
,
Stéphanie Bolot
,
Endrick Guy
,
Nicolas Denancé
,
Martine Lautier
et al.
Article dans une revue
hal-01455988
v1
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Combined genetic and transcriptomic analysis reveals three major signalling pathways activated by Myc-LCOs in <em>Medicago truncatula</em>
Céline Camps
,
Marie-Françoise Jardinaud
,
David Rengel
,
Sebastien Carrere
,
Christine Hervé
et al.
Article dans une revue
hal-02632553
v1
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Full-length <em>de novo</em> assembly of RNA-seq data in pea (<em>Pisum sativum</em> L.) provides a gene expression atlas and gives insights into root nodulation in this species
Susete Alves Carvalho
,
Gregoire G. Aubert
,
Sebastien Carrere
,
Corinne Cruaud
,
Anne-Lise Brochot
et al.
Article dans une revue
(article de synthèse)
hal-02631162
v1
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Draft Genome Sequence of Xanthomonas axonopodis pv. allii Strain CFBP 6369.
Lionel Gagnevin
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Stéphanie Bolot
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J L Gordon
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Olivier Pruvost
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Christian Vernière
et al.
Article dans une revue
hal-01209994
v1
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The plant pathogen Xanthomonas campestris pv. campestris exploits N-acetylglucosamine during infection.
Alice Boulanger
,
Claudine Zischek
,
Martine Lautier
,
Stevie Jamet
,
Pauline Rival
et al.
Article dans une revue
hal-02637892
v1
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Genome Sequencing of Ralstonia solanacearum Biovar 3, Phylotype I, Strains Rs-09-161 and Rs-10-244, Isolated from Eggplant and Chili in India.
Raman Ramesh
,
Sapna Gaitonde
,
Gauri Achari
,
Trupti Asolkar
,
Narendra Pratap Singh
et al.
Article dans une revue
hal-02629436
v1
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RNA-Seq profile of flavescence dorée phytoplasma in grapevine.
Simona Abbà
,
Luciana Galetto
,
Patricia Carle
,
Sebastien Carrere
,
Massimo Delledonne
et al.
Article dans une revue
hal-02636852
v1
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An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing
Brice Roux
,
Nathalie Rodde
,
Marie-Françoise Jardinaud
,
Ton Timmers
,
Laurent Sauviac
et al.
Article dans une revue
hal-03082945
v1
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Genome Sequences of Three Atypical Xanthomonas campestris pv. campestris Strains, CN14, CN15, and CN16.
Stéphanie S. Bolot
,
Brice Roux
,
Sebastien Carrere
,
Bo-Le Jiang
,
Ji-Liang Tang
et al.
Article dans une revue
hal-02645772
v1
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Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. manihotis strain CIO151
Mario L. Arrieta-Ortiz
,
Luis M. Rodríguez-R
,
Alvaro L. Pérez-Quintero
,
Lucie Poulin
,
Ana C. Díaz
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Article dans une revue
hal-01199314
v1
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Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads
Armelle Darrasse
,
Sebastien Carrere
,
Valérie Barbe
,
Tristan Boureau
,
Mario L. Arrieta-Ortiz
et al.
Article dans une revue
hal-01199326
v1
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Genome mining reveals the genus Xanthomonas to be a promising reservoir for new bioactive non-ribosomally synthesized peptides
Monique Royer
,
Ralf Koebnik
,
Melanie Marguerettaz
,
Valerie Barbe
,
Guillaume P. Robin
et al.
Article dans une revue
hal-01209938
v1
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Genome Sequence of Xanthomonas campestris pv. campestris Strain Xca5.
Stéphanie S. Bolot
,
Endrick Guy
,
Sebastien Carrere
,
Valérie Barbe
,
Matthieu Arlat
et al.
Article dans une revue
hal-02649490
v1
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High-Quality Draft Genome Sequences of Xanthomonas axonopodis pv. glycines Strains CFBP 2526 and CFBP 7119.
Armelle Darrasse
,
Stéphanie S. Bolot
,
Laurana Serres Giardi
,
Erika Charbit
,
Tristan Boureau
et al.
Article dans une revue
hal-02648487
v1
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High-Quality Draft Genome Sequence of Xanthomonas alfalfae subsp. alfalfae Strain CFBP 3836.
Marie Agnes Jacques
,
Stéphanie S. Bolot
,
Erika Charbit
,
Armelle Darrasse
,
Martial Briand
et al.
Article dans une revue
hal-02649259
v1
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Natural genetic variation of Xanthomonas campestris pv. campestris pathogenicity on Arabidopsis revealed by association and reverse genetics
Endrick Guy
,
Anne Genissel
,
Ahmed Hajri
,
Matthieu Chabannes
,
Perrine David
et al.
Article dans une revue
hal-01199307
v1
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Draft Genome Sequence of the Xanthomonas cassavae Type Strain CFBP 4642.
Stéphanie S. Bolot
,
Alejandra Munoz Bodnar
,
Sébastien Cunnac
,
Erika Ortiz
,
Boris Szurek
et al.
Article dans une revue
hal-02642222
v1
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High-Quality Draft Genome Sequences of Two Xanthomonas citri pv. malvacearum Strains.
Sébastien Cunnac
,
Stéphanie S. Bolot
,
Natalia Forero Serna
,
Erika Ortiz
,
Boris Szurek
et al.
Article dans une revue
hal-02643147
v1
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The xylan utilization system of the plant pathogen Xanthomonas campestris pv campestris controls epiphytic life and reveals common features with oligotrophic bacteria and animal gut symbionts
Guillaume Dejean
,
Servane Blanvillain-Baufume
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Alice Boulanger
,
Armelle Darrasse
,
Thomas Duge de Bernonville
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Article dans une revue
hal-01209910
v1
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Repertoire, unified nomenclature and evolution of the Type III effector gene set in the <em>Ralstonia solanacearum</em> species complex
Nemo Peeters
,
Sebastien Carrere
,
Maria Anisimova
,
Laure Plener
,
Anne-Claire Cazalé
et al.
Article dans une revue
hal-02647666
v1
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|
Microsatellite markers for characterization of native and introduced populations of Plasmopara viticola, the causal agent of grapevine downy mildew
Mélanie Rouxel
,
Daciana Papura
,
Marilise Nogueira
,
Virginie Machefer
,
Damien Dezette
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Article dans une revue
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