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Une mutation ponctuelle et une large délétion au locus candidat d’avirulence AvrMlp7 chez la rouille du peuplier sont corrélés avec le contournement de la résistance RMlp7 exprimée par le peuplier
Clémentine Louet
,
Méline Saubin
,
Axelle Andrieux
,
Antoine Persoons
,
Mathilde Gorse
et al.
Journées Jean Chevaugeon, 13èmes Rencontres de Phytopathologie - Mycologie, Sep 2022, Aussois, France
Communication dans un congrès
hal-04137634
v1
|
|
Revisiting life cycle and biology of rust fungi (Pucciniales) in the genomics era
Sébastien Duplessis
International Plant Immunity Symposium (IPIS) 2021, Goettingen University (IRTG 2172: PRoTECT: Plant Responses To Eliminate Critical Threats), Aug 2021, Goettingen, Germany
Communication dans un congrès
hal-03328724
v1
|
|
Association of two co-occurring mutations at the AvrMlp7 avirulence locus in poplar rust during the breakdown of RMlp7 resistance gene
Louet C
,
Méline Saubin
,
Axelle Andrieux
,
A. Persoons
,
Gorce M
et al.
Molecular Mechanism & Structure— Zooming in on Plant Immunity, Jul 2021, e-symposia, Germany
Communication dans un congrès
hal-03588311
v1
|
|
From population genomics to molecular approaches to identify and analyse the first avirulence gene in the poplar rust fungus Melampsora larici-populina
Clémentine Louet
,
Méline Saubin
,
Antoine Persoons
,
Axelle Andrieux
,
Bénédicte Fabre
et al.
Réunion 2020 du groupe "champignons phytopathogènes", Nov 2020, aucune (visio), France
Communication dans un congrès
hal-03336539
v1
|
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Genomics of Pucciniales
Sébastien Duplessis
30th Fungal Genetics Conference, GEnetics Society of America, Mar 2019, Asilomar, Pacific Grove, California, United States
Communication dans un congrès
hal-03251311
v1
|
|
Towards evolutionary and functional characterization of an avirulence gene in the poplar rust fungus
Pascal Frey
,
Clémentine Louet
,
Agathe Maupetit
,
Méline Saubin
,
Antoine Persoons
et al.
IUFRO Joint Conference: Genetics of Five-Needle Pines & Rusts of Forest Trees, Jul 2019, Invermere, United States
Communication dans un congrès
hal-04137412
v1
|
|
Deciphering complex plant-microbe interactions with genomics: from the case study of the poplar-poplar rust interaction toward rust pangenomics
Sébastien Duplessis
Université RWTH-Aachen, May 2019, Aachen, Germany
Communication dans un congrès
hal-03255976
v1
|
|
Phylogenetics and comparative transcriptomics of Gymnosporangium species
Sébastien Duplessis
,
Si-Qi Tao
,
Emmanuelle Morin
,
Tian Cheng-Ming
,
Liang Ying-Mei
Rust workshop of the 30th Fungal Genetics Conference, Genetics Society of America, Mar 2019, Asilomar, Pacific Grove, Californie, United States
Communication dans un congrès
hal-03251310
v1
|
|
The poplar-poplar rust interaction: an emerging model system in tree pathology
Sébastien Duplessis
11th National Poplar Symposium, Chinese Academy of Forestry, Sep 2019, Xiongan, Hebei province, China
Communication dans un congrès
hal-03251313
v1
|
|
Recent progress on genomics and effectoromics of poplar rust fungi
Sébastien Duplessis
30th Fungal Genetics Conference, Genetics Society of America, Mar 2019, Asilomar, Pacific Grove, California, United States
Communication dans un congrès
hal-03251312
v1
|
|
First avirulence gene in the poplar rust fungus Melampsora larici-populina, from genetic characterization to functional validation
Clémentine Louet
,
Méline Saubin
,
Antoine Persoons
,
Agathe Maupetit
,
Stéphane de Mita
et al.
12th Effectome Meeting, Oct 2019, Lauret, France
Communication dans un congrès
hal-04137237
v1
|
|
From mutation to population extinction: The butterfly effect of resistance breakdown in the poplar rust fungus Melampsora larici- populina
Antoine Persoons
,
Fabien Halkett
,
Sébastien Duplessis
,
Pascal Frey
,
Stéphane de Mita
XVIII International Congress on Molecular Plant-Microbe Interactions (IS-MPMI), Jul 2019, Glasgow, United Kingdom. pp.S1.1-S1.243
Communication dans un congrès
hal-04137226
v1
|
|
Table ronde sur les aspects "utilisateurs" : intérêts et retours d’expériences de chercheurs et enseignants-chercheurs du site
Xavier Manival
,
Lucas Nussbaum
,
Sébastien Duplessis
,
Emmanuelle Montargès-Pelletier
,
Pierre Humbert
Colloque Sciences ouvertes : expériences, enjeux et perspectives, Université de Lorraine; Ministère de l'Enseignement supérieur, de la Recherche et de l'Innovation, Oct 2018, Vandœuvre-lès-Nancy, France
Communication dans un congrès
hal-01885979
v1
|
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An integrated information system dedicated to oak genomics and genetics
Joëlle Amselem
,
Nicolas Francillonne
,
Célia Michotey
,
Thomas Letellier
,
Jean-Marc Aury
et al.
PAG XXVI Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.27 slides
Communication dans un congrès
hal-01839185
v1
|
|
Deciphering host specificity in poplar rust fungi through life-cycle transcriptomics and comparative genomics.
Sébastien Duplessis
Rust workshop of the 29th Fungal Genetics Conference, Genetics Society of America, Mar 2017, Asilomar, Pacific Grove, Californie, United States
Communication dans un congrès
hal-03251308
v1
|
|
Demographic and genomic consequences of a major selective event in the poplar rust
Fabien Halkett
,
Antoine Persoons
,
Agathe Maupetit
,
Sébastien Duplessis
,
Pascal Frey
et al.
International Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Ascona, Switzerland
Communication dans un congrès
hal-02790211
v1
|
|
Genome-wide QTL mapping of aggressiveness traits in the poplar rust fungus
Michaël Pernaci
,
Agathe Maupetit
,
Stéphane de Mita
,
Bénédicte Fabre
,
Sébastien Duplessis
et al.
International Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Monte Verità Conference Center, Ascona, Switzerland
Communication dans un congrès
hal-02785090
v1
|
|
Le séquençage du génome du chêne
Sébastien Duplessis
Journée à thème Recherche agronomique et forestière de l'association Emerites.Lorraine, Centre INRA Grand Est Nancy, Association Emerites.Lorraine, Jun 2017, Champenoux, France
Communication dans un congrès
hal-03251309
v1
|
|
Update on Melampsora larici-populina genomics
Sébastien Duplessis
,
Stéphane de Mita
,
Fabien Halkett
,
Pascal Frey
11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France
Communication dans un congrès
hal-02741208
v1
|
|
Update on Melampsora larici-populina genomics.
Sébastien Duplessis
MPI TerMic - ARBRE Interdepartmental workshop on plant-fungus interactions, MPI Terrestrial Microbiology, Marburg, Oct 2016, Marburg, Germany
Communication dans un congrès
hal-03251305
v1
|
|
Analyse moléculaire d'une interaction arbre-champignon pathogène: la rouille foliaire du peuplier à l'ère de la génomique.
Sébastien Duplessis
Congrès annuel de l'UPBM (Union des Professeurs de Physiologie Biochimie Microbiologie, professeurs des sections biotechnologiques., UPBM, Oct 2016, Nancy, France
Communication dans un congrès
hal-03251307
v1
|
|
Genomics research on non-model plant pathogens: delivering novel insights into rust fungus biology
Sébastien Duplessis
49° Congresso Brasileiro de Fitopatologia, Aug 2016, Maceio, Brazil
Communication dans un congrès
hal-03251304
v1
|
|
Deciphering host specificity in poplar rust fungi through life-cycle transcriptomics and comparative genomics
Sébastien Duplessis
International Society for Molecular Plant Microbe Interactions XVII congress, International Society for Molecular Plant Microbe Interactions, Jul 2016, Portland, Oregon, United States
Communication dans un congrès
hal-03251306
v1
|
|
Annotation of the oak genome sequence and associated bioinformatic resources
Joelle J. Amselem
,
Jean Marc Aury
,
Nicolas Francillonne
,
Tina Alaeitabar
,
Corinne da Silva
et al.
IUFRO Genomics and Forest Tree Genetics, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès
hal-02741128
v1
|
|
Mapping QTL of aggressiveness traits in the poplar rust fungus
Michaël Pernaci
,
Stéphane de Mita
,
Bénédicte Fabre
,
Sébastien Duplessis
,
Fabien Halkett
et al.
9eme Colloque de la Société Française de Phytopathologie, Jun 2015, Colmar, France
Communication dans un congrès
hal-02792933
v1
|
|
Mapping QTL of aggressiveness traits in the poplar rust fungus
Michaël Pernaci
,
Stéphane de Mita
,
Bénédicte Fabre
,
Sébastien Duplessis
,
Fabien Halkett
et al.
5. International Conference on Genetics of Tree-Parasite Interactions : Novel challenges and opportunities for resistance to pests and pathogens, Aug 2015, Orléans, France
Communication dans un congrès
hal-02793206
v1
|
|
Identification of candidate effectors in the poplar rust fungus <em>Melampsora larici-populina</em> through a population genomics approach
Antoine Persoons
,
Fabien Halkett
,
Stéphane de Mita
,
Sébastien Duplessis
28. Fungal Genetics Conference, Mar 2015, Asilomar, Pacific Grove, CA, United States
Communication dans un congrès
hal-02792660
v1
|
|
On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungus
Michaël Pernaci
,
Stéphane de Mita
,
Bénédicte Fabre
,
Sébastien Duplessis
,
Fabien Halkett
et al.
Réunion annuelle 2015 du Réseau Ecologie des Interactions Durables, Mar 2015, Lyon, France
Communication dans un congrès
hal-02792666
v1
|
|
Patterns of genomic variation in the poplar rust fungus <em>Melampsora larici-populina</em> identify pathogenesis-related factors
Antoine Persoons
,
Emmanuelle Morin
,
Christine Delaruelle
,
Thibaut Payen
,
Fabien Halkett
et al.
Max-Planck-ARBRE inter-departmental workshop on plant-fungus interactions, Nov 2014, Nancy, France
Communication dans un congrès
hal-02794927
v1
|
|
Identification d’effecteurs de <em>Melampsora larici-populina</em> par une approche originale : de la génomique des populations à la génomique fonctionnelle
Antoine Persoons
,
Stéphane de Mita
,
Fabien Halkett
,
Sébastien Duplessis
10. Rencontres de Phytopathologie - Mycologie - JJC 2014 Journée Jean Chevaugeon, Jan 2014, Aussois, France. 116 p
Communication dans un congrès
hal-02742734
v1
|
|
Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus <em>Melampsora larici-populina</em>
Benjamin Petre
,
Stéphane S. Hacquard
,
Antoine Persoons
,
Emilie Tisserant
,
Emmanuelle Morin
et al.
IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States
Communication dans un congrès
hal-02801804
v1
|
|
Genome-wide signature of adaptation in a recently introduced pathogen
N. Feau
,
Pascal Frey
,
Sébastien Duplessis
,
R. C. Hamelin
APS-MSA Joint Meeting, Aug 2013, Austin, Texas, United States
Communication dans un congrès
hal-01268359
v1
|
|
Phylogenetic analysis of Hemileia vastatrix and related taxa using a genome-scale approach
Diogo N. Silva
,
Ana Vieira
,
Pedro Talhinhas
,
Helena Gil Azinheira
,
Maria Do Ceu Silva
et al.
24. International Conference on Coffee Science. ASIC 2012, Nov 2012, San Jose, Costa Rica
Communication dans un congrès
hal-01267895
v1
|
|
Development of genomic resources to study the structure, function and evolution of the oak genome
Christophe Plomion
,
Joelle J. Amselem
,
Jean-Marc Aury
,
Catherine Bodenes
,
Emilie Chancerel
et al.
IUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès
hal-01019850
v1
|
|
Les apports de la génomique pour l’étude des familles multigéniques : exemple des thaumatin-like proteins (TLPs) chez le peuplier
Benjamin Petre
,
Ian Major
,
Pascal Frey
,
Francis Martin
,
Nicolas Rouhier
et al.
Séminaire de l’Ecole Doctorale RP2E. Biodiversité, Ingénierie écologique, Jan 2011, Vandoeuvre-lès-Nancy, France. 8 p
Communication dans un congrès
hal-02746248
v1
|
|
Fungal genome analysis of transposable elements: expansion vs RIP silencing
Joelle J. Amselem
,
Timothée T. Flutre
,
Victoria Fabia Dominguez del Angel
,
Jonathan J. Kreplak
,
Sébastien Duplessis
et al.
Plant and Animal Genome: 19. Conference, Jan 2011, San Diego, United States. n.p
Communication dans un congrès
hal-00956370
v1
|
|
Overview of the functional virulent genome of the coffee leaf rust pathogen Hemileia vastatrix
Pedro Talhinhas
,
Helena Gil Azinheira
,
Andreia Loureiro
,
Dora Batista
,
B Vieira
et al.
23. International Conference on Coffee Science - ASIC 2010, Oct 2010, Bali, Indonesia
Communication dans un congrès
hal-02745180
v1
|
|
Breeding poplars with durable resistance to Melampsora larici-populina leaf rust : a multidisciplinary approach to understand and delay pathogen adaptation
Arnaud A. Dowkiw
,
Catherine Bastien
,
Véronique V. Jorge
,
Marc M. Villar
,
Elodie Voisin
et al.
4. International Workshop on the Genetics of Host-Parasite Interactions in Forestry : "Disease and Insect Resistance in Forest Trees", United States Department of Agriculture - USDA (USA) (USDA). Forest service, Ville service, USA., Jul 2011, Eugene, Oregon, United States. 112 p
Communication dans un congrès
hal-02748005
v1
|
|
Hemileia vastatrix gene expression during the infection process of coffee leaves
Ana Vieira
,
Pedro Talhinhas
,
Andreia Loureiro
,
Sébastien Duplessis
,
Diana Fernandez
et al.
23. International Conference on Coffee Science - ASIC 2010, Oct 2010, Bali, Indonesia
Communication dans un congrès
hal-02745179
v1
|
|
Chasing effectors in the secretome of Melampsora larici-populina
David L Joly
,
Stéphane S. Hacquard
,
Nicolas Feau
,
Philippe Tanguay
,
Francis Martin
et al.
14. International Congress on Molecular Plant-Microbe Interactions, Jul 2009, Québec, Canada
Communication dans un congrès
hal-02752437
v1
|
|
No resistance is sacrosanct: unveiling the genes controlling quantitative resistance to Melampsora larici-populina in interspecific hybrid poplars and quantifying potential adaptation of the pathogen
Arnaud A. Dowkiw
,
Véronique V. Jorge
,
Elodie Voisin
,
Patricia P. Faivre-Rampant
,
Alois Bresson
et al.
4. International Rusts of Forest Trees Conference. IUFRO Working Party 02.07.05, May 2010, Florence, Italy
Communication dans un congrès
hal-02754692
v1
|
|
Towards broad-spectrum resistance to Melampsora larici-populina rust in poplar: new genetic constructions and potential adaptation of the pathogen
Catherine Bastien
,
Arnaud A. Dowkiw
,
Véronique V. Jorge
,
Elodie Voisin
,
Vanina Guérin
et al.
5. International Poplar Symposium;IPS V, Sep 2010, Orvieto, Italy
Communication dans un congrès
hal-02753480
v1
|
|
Two FCA-Based Methods for Mining Gene Expression Data
Mehdi Kaytoue
,
Sébastien Duplessis
,
Sergei O. Kuznetsov
,
Amedeo Napoli
Communication dans un congrès
istex
inria-00600200
v1
|
|
L'analyse formelle de concepts pour l'extraction de connaissances dans les données d'expression de gènes
Mehdi Kaytoue
,
Sébastien Duplessis
,
Amedeo Napoli
Extraction et gestion des connaissances, Jan 2009, Strasbourg, France. pp.439-440
Communication dans un congrès
inria-00600217
v1
|
|
Joint transcriptomic and proteomic approaches to precise the molecular basis of a major QTL (RUS) controlling quantitative rust resistance in poplar
Véronique V. Jorge
,
Sébastien Duplessis
,
Céline C. Lalanne
,
Alois Bresson
,
Arnaud A. Dowkiw
et al.
Plant genomics and beyond, Jul 2009, Evry, France
Communication dans un congrès
hal-02756173
v1
|
|
L’analyse formelle de concepts pour l’extraction de connaissances dans les données d’expression de gènes
Sébastien Duplessis
,
Mehdi Kaytoue
,
Amedeo Napoli
Extraction et gestion des connaissances (EGC’2009), Jan 2009, Strasbourg, France. pp.439-440
Communication dans un congrès
hal-02756939
v1
|
|
Toward the discovery of itemsets with significant variations in gene expression matrices
Mehdi Kaytoue
,
Sébastien Duplessis
,
Amedeo Napoli
First joint meeting of the Société Francophone de Classification and the Classification and Data Analysis Group of the Italian Statistical Society - SFC - CLADAG 2008, Jun 2008, Caserta, Italy
Communication dans un congrès
inria-00600224
v1
|
|
Using Formal Concept Analysis for the Extraction of Groups of Co-expressed Genes
Mehdi Kaytoue-Uberall
,
Sébastien Duplessis
,
Amedeo Napoli
4.International Conference on Intelligent Computing, Sep 2008, Shanghai, China
Communication dans un congrès
hal-02757987
v1
|
|
Using Formal Concept Analysis for the Extraction of Groups of Co-expressed Genes
Mehdi Kaytoue
,
Sébastien Duplessis
,
Amedeo Napoli
Modelling, Computation and Optimization in Information Systems and Management Sciences, Sep 2008, Metz, France. pp.439-449, ⟨10.1007/978-3-540-87477-5_47⟩
Communication dans un congrès
inria-00600212
v1
|
|
Molecular characterisation of a major QTL for rust resistance in poplar using a proteomic approach
Céline C. Lalanne
,
Catherine Bastien
,
Pascal Frey
,
Arnaud A. Dowkiw
,
Véronique V. Jorge
et al.
IUFRO - Tree Biotechnology, Jun 2007, Ponta Delgada, Azores, Portugal
Communication dans un congrès
hal-02754112
v1
|
|
Effet du stress osmotique sur la croissance racinaire du peuplier : approche par génomique fonctionnelle à l'échelle de la zone de croissance
Marie-Béatrice Bogeat-Triboulot
,
Aude Hummel
,
Sébastien Duplessis
,
Annegret Kohler
IFR 110, Nov 2006, Nancy, France. 17 p
Communication dans un congrès
hal-02812516
v1
|
|
Characterization of the early response of poplar to rust infection using expression profiling
Sébastien Duplessis
,
Annegret Kohler
,
Cécile Rinaldi
,
Pascal Frey
,
Francis Martin
12. New Phytologist Symposium. Functional genomics of environmental adaptation in Populus, Oct 2004, Gatlinburg, United States. 1 p
Communication dans un congrès
hal-02830800
v1
|
|
The wood underground: a glimpse of the interactions between trees and ectomycorrhizal fungi
Francis Martin
,
Annegret Kohler
,
Anne Jambois
,
Sébastien Duplessis
,
Frédéric Lapeyrie
12. New Phytologist Symposium. Functional genomics of environmental adaptation in Populus, Oct 2004, Gatlinburg, United States. 1 p
Communication dans un congrès
hal-02829957
v1
|