Stephanie Le Gras

69
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Publications

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Dysregulated expression of cholesterol biosynthetic genes in Alzheimer's disease alters epigenomic signatures of hippocampal neurons

I. Paiva , J. Seguin , I. Grgurina , A. K. Singh , B. Cosquer et al.
Neurobiology of Disease, 2024, Neurobiology of Disease, 198, pp.106538. ⟨10.1016/j.nbd.2024.106538⟩
Article dans une revue hal-04686940 v1

RNA polymerase II transcription initiation in holo-TFIID-depleted mouse embryonic stem cells

Vincent Hisler , Paul Bardot , Dylane Detilleux , Andrea Bernardini , Matthieu Stierle et al.
Cell Reports, 2024, 43 (10), pp.114791. ⟨10.1016/j.celrep.2024.114791⟩
Article dans une revue inserm-04714824 v1
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Mutant FUS induces chromatin reorganization in the hippocampus and alters memory processes

Laura Tzeplaeff , Jonathan Seguin , Stéphanie Le Gras , Salim Megat , Brigitte Cosquer et al.
Progress in Neurobiology, 2023, 227, pp.102483. ⟨10.1016/j.pneurobio.2023.102483⟩
Article dans une revue hal-04714491 v1

Super-enhancer-driven expression of BAHCC1 promotes melanoma cell proliferation and genome stability

Pietro Berico , Maguelone Nogaret , Max Cigrang , Antonin Lallement , Fatemeh Vand-Rajabpour et al.
Cell Reports, 2023, 42 (11), pp.113363. ⟨10.1016/j.celrep.2023.113363⟩
Article dans une revue hal-04739149 v1
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Super-enhancer-driven expression of BAHCC1 promotes melanoma cell proliferation and genome stability

Pietro Berico , Maguelone Nogaret , Max Cigrang , Antonin Lallement , Fatemeh Vand-Rajabpour et al.
Cell Reports, 2023, 42 (11), pp.113363. ⟨10.1016/j.celrep.2023.113363⟩
Article dans une revue hal-04398947 v1
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Multi-Omics Data Integration Reveals Sex-Dependent Hippocampal Programming by Maternal High-Fat Diet during Lactation in Adult Mouse Offspring

Thibaut Gauvrit , Hamza Benderradji , Alexandre Pelletier , Soulaimane Aboulouard , Emilie Faivre et al.
Nutrients, 2023, 15 (21), pp.4691. ⟨10.3390/nu15214691⟩
Article dans une revue hal-04398934 v1
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Analysis of the P. lividus sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes

Ferdinand Marlétaz , Arnaud Couloux , Julie Poulain , Karine Labadie , Corinne da Silva et al.
Cell Genomics, 2023, 3 (4), pp.100295. ⟨10.1016/j.xgen.2023.100295⟩
Article dans une revue (data paper) hal-04093287 v1
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Mitotic chromosome condensation resets chromatin to safeguard transcriptional homeostasis during interphase

Lucía Ramos-Alonso , Petter Holland , Stéphanie Le Gras , Xu Zhao , Bernard Jost et al.
Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (4), ⟨10.1073/pnas.2210593120⟩
Article dans une revue hal-04098268 v1
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MBD4 loss results in global reactivation of promoters and retroelements with low methylated CpG density

Christophe Papin , Abdulkhaleg Ibrahim , Jamal Sabir , Stéphanie Le Gras , Isabelle Stoll et al.
Journal of experimental & clinical cancer research, 2023, 42 (1), pp.301. ⟨10.1186/s13046-023-02882-z⟩
Article dans une revue hal-04288047 v1
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Dual role of histone variant H3.3B in spermatogenesis: positive regulation of piRNA transcription and implication in X-chromosome inactivation

Emeline Fontaine , Christophe Papin , Guillaume Martinez , Stéphanie Le Gras , Roland Abi Nahed et al.
Nucleic Acids Research, 2022, 50 (13), pp.7350-7366. ⟨10.1093/nar/gkac541⟩
Article dans une revue hal-03852700 v1
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Istradefylline protects from cisplatin-induced nephrotoxicity and peripheral neuropathy while preserving cisplatin antitumor effects

Edmone Dewaeles , Kévin Carvalho , Sandy Fellah , Jaewon Sim , Nihad Boukrout et al.
The Journal of clinical investigation, 2022, 132 (22), pp.e152924. ⟨10.1172/JCI152924⟩
Article dans une revue inserm-03865945 v1
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Caffeine intake exerts dual genome-wide effects on hippocampal metabolism and learning-dependent transcription

Isabel Paiva , Lucrezia Cellai , Céline Meriaux , Lauranne Poncelet , Ouada Nebie et al.
The Journal of clinical investigation, 2022, 132 (12), ⟨10.1172/JCI149371⟩
Article dans une revue hal-03855350 v1
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Polyglutamine-expanded ATXN7 alters a specific epigenetic signature underlying photoreceptor identity gene expression in SCA7 mouse retinopathy

Anna Niewiadomska-Cimicka , Antoine Hache , Stéphanie Le Gras , Céline Keime , Tao Ye et al.
Journal of Biomedical Science, 2022, 107, ⟨10.1186/s12929-022-00892-1⟩
Article dans une revue hal-03935562 v1
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TRIM28-dependent SUMOylation protects the adult ovary from activation of the testicular pathway

Moïra Rossitto , Stephanie Déjardin , Chris M Rands , Stephanie Le Gras , Roberta Migale et al.
Nature Communications, 2022, 13 (1), pp.4412. ⟨10.1038/s41467-022-32061-1⟩
Article dans une revue hal-03746540 v1
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Waves of sumoylation support transcription dynamics during adipocyte differentiation

Xu Zhao , Ivo A Hendriks , Stéphanie Le Gras , Tao Ye , Lucía Ramos-Alonso et al.
Nucleic Acids Research, 2022, 50 (3), pp.1351-1369. ⟨10.1093/nar/gkac027⟩
Article dans une revue hal-03716138 v1
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CDK7 and MITF repress a transcription program involved in survival and drug tolerance in melanoma

Pietro Berico , Max Cigrang , Guillaume Davidson , Cathy Braun , Jeremy Sandoz et al.
EMBO Reports, 2021, 22 (9), pp.e51683. ⟨10.15252/embr.202051683⟩
Article dans une revue inserm-03336903 v1

Polycystic ovary syndrome is transmitted via a transgenerational epigenetic process

Nour El Houda Mimouni , Isabel Paiva , Anne-Laure Barbotin , Fatima Ezzahra Timzoura , Damien Plassard et al.
Cell Metabolism, 2021, 33 (3), pp.513-530.e8. ⟨10.1016/j.cmet.2021.01.004⟩
Article dans une revue hal-04161337 v1
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Helios represses megakaryocyte priming in hematopoietic stem and progenitor cells

Giovanni Cova , Chiara Taroni , Marie-Céline Deau , Qi Cai , Vincent Mittelheisser et al.
Journal of Experimental Medicine, 2021, 218 (10), pp.e20202317. ⟨10.1084/jem.20202317⟩
Article dans une revue hal-03375832 v1

CpG Islands Shape the Epigenome Landscape

Christophe Papin , Stéphanie Le Gras , Abdulkhaleg Ibrahim , Hatem Salem , Mohammad Mahdi Karimi et al.
Journal of Molecular Biology, 2021, 433 (6), pp.166659. ⟨10.1016/j.jmb.2020.09.018⟩
Article dans une revue hal-03450118 v1

MeCP2 is a microsatellite binding protein that protects CA repeats from nucleosome invasion

Abdulkhaleg Ibrahim , Christophe Papin , Kareem Mohideen-Abdul , Stéphanie Le Gras , Isabelle Stoll et al.
Science, 2021, 372 (6549), ⟨10.1126/science.abd5581⟩
Article dans une revue inserm-03376640 v1
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Succinylation of H3K122 destabilizes nucleosomes and enhances transcription

Lara Zorro Shahidian , Mariska Haas , Stéphanie Le Gras , Sandra Nitsch , André Mourão et al.
EMBO Reports, 2021, 22 (3), ⟨10.15252/embr.202051009⟩
Article dans une revue hal-03713626 v1
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Polycystic ovary syndrome is transmitted via a transgenerational epigenetic process

Nour El Houda Mimouni , Isabel Paiva , Anne Laure Barbotin , Fatima Ezzahra Timzoura , Damien Plassard et al.
Cell Metabolism, 2021, 33 (3), pp.513-530.e8. ⟨10.1016/j.cmet.2021.01.004⟩
Article dans une revue hal-03427354 v1
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Sequential actions of EOMES and T-BET promote stepwise maturation of natural killer cells

Jiang Zhang , Stéphanie Le Gras , Kevin Pouxvielh , Fabrice Faure , Lucie Fallone et al.
Nature Communications, 2021, 12 (1), pp.5446. ⟨10.1038/s41467-021-25758-2⟩
Article dans une revue hal-03357265 v1
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Correction: Ikaros antagonizes DNA binding by STAT5 in pre-B cells

Beate Heizmann , Stéphanie Le Gras , Célestine Simand , Patricia Marchal , Susan Chan et al.
PLoS ONE, 2020, 15 (11), pp.e0242211. ⟨10.1371/journal.pone.0242211⟩
Article dans une revue hal-03665603 v2
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Heterochromatin establishment during early mammalian development is regulated by pericentromeric RNA and characterized by non-repressive H3K9me3

Adam Burton , Vincent Brochard , Carmen Galán , Elias Ruiz-Morales , Quirze Rovira et al.
Nature Cell Biology, 2020, 22 (7), pp.767-778. ⟨10.1038/s41556-020-0536-6⟩
Article dans une revue hal-02903653 v1
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Cell-Type-Specific Gene Expression Profiling in Adult Mouse Brain Reveals Normal and Disease-State Signatures

Nicolas Merienne , Cécile Meunier , Anne Schneider , Jonathan Seguin , Satish Nair et al.
Cell Reports, 2019, 26 (9), pp.2477-2493.e9. ⟨10.1016/j.celrep.2019.02.003⟩
Article dans une revue hal-02087719 v1
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Exacerbation of C1q dysregulation, synaptic loss and memory deficits in tau pathology linked to neuronal adenosine A2A receptor

Kevin Carvalho , Emilie Faivre , Marie Pietrowski , Xavier Marques , Victoria Gomez-Murcia et al.
Brain - A Journal of Neurology , 2019, 142 (11), pp.3636-3654. ⟨10.1093/brain/awz288⟩
Article dans une revue inserm-02350065 v1

Genes and Pathways Regulated by Androgens in Human Neural Cells, Potential Candidates for the Male Excess in Autism Spectrum Disorder

Angélique Quartier , Laure Chatrousse , Claire Redin , Céline Keime , Nicolas Haumesser et al.
Biological psychiatry, 2018, 84 (4), pp.239-252. ⟨10.1016/j.biopsych.2018.01.002⟩
Article dans une revue hal-03670936 v1

Genes and Pathways Regulated by Androgens in Human Neural Cells, Potential Candidates for the Male Excess in Autism Spectrum Disorder

Angélique Quartier , Laure Chatrousse , Claire Redin , Céline Keime , Nicolas Haumesser et al.
Biological Psychiatry, 2018, 84 (4), pp.239-252. ⟨10.1016/j.biopsych.2018.01.002⟩
Article dans une revue hal-04404908 v1

La médiation corporelle dans la prise en charge globale de jeunes souffrant d’anorexie mentale

Catherine Saez , Laurence Suelves , Marie Deguitre , Blandine Deffinis , Marie-Jeanne Calmels et al.
Soins Pédiatrie/Puériculture, 2018, 39 (303), pp.38-43. ⟨10.1016/j.spp.2018.05.009⟩
Article dans une revue hal-02316819 v1
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Reinstating plasticity and memory in a tauopathy mouse model with an acetyltransferase activator

Snehajyoti Chatterjee , Raphaelle Cassel , Anne Schneider‐anthony , Karine Mérienne , Brigitte Cosquer et al.
EMBO Molecular Medicine, 2018, 10 (11), pp.e8587. ⟨10.15252/emmm.201708587⟩
Article dans une revue inserm-01930486 v1
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MAPK-triggered chromatin reprogramming by histone deacetylase in plant innate immunity

David Latrasse , Teddy Jegu , Huchen Li , Axel de Julien de Zelicourt , Cécile Raynaud et al.
Genome Biology, 2017, 18, pp.131. ⟨10.1186/s13059-017-1261-8⟩
Article dans une revue hal-02627216 v1
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TEAD transcription factors are required for normal primary myoblast differentiation in vitro and muscle regeneration in vivo

Shilpy Joshi , Guillaume Davidson , Stéphanie Le Gras , Shuichi Watanabe , Thomas Braun et al.
PLoS Genetics, 2017, 13 (2), pp.e1006600. ⟨10.1371/journal.pgen.1006600⟩
Article dans une revue hal-03524880 v1
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The <em>Arabidopsis</em> SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility

Teddy Jegu , Alaguraj Veluchamy , Juan Sebastien Ramirez Prado , Charley Rizzi Paillet , Magali Perez et al.
Genome Biology, 2017, 18, pp.114. ⟨10.1186/s13059-017-1246-7⟩
Article dans une revue hal-02627578 v1

Intragenic FMR1 disease-causing variants: a significant mutational mechanism leading to Fragile-X syndrome

Angélique Quartier , Hélène Poquet , Brigitte Gilbert-Dussardier , Massimiliano Rossi , Anne-Sophie Casteleyn et al.
European Journal of Human Genetics, 2017, 25 (4), pp.423 - 431. ⟨10.1038/ejhg.2016.204⟩
Article dans une revue hal-04542452 v1

Histone propionylation is a mark of active chromatin

Adam Kebede , Anna Nieborak , Lara Shahidian , Stéphanie Le Gras , Florian Richter et al.
Nature Structural and Molecular Biology, 2017, ⟨10.1038/nsmb.3490⟩
Article dans une revue hal-03677811 v1
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Altered enhancer transcription underlies Huntington’s disease striatal transcriptional signature

Stéphanie Le Gras , Céline Keime , Anne Anthony , Caroline Lotz , Lucie de Longprez et al.
Scientific Reports, 2017, 7 (Article number: 42875), ⟨10.1038/srep42875⟩
Article dans une revue cea-01751880 v1
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Macrophage production and activation are dependent on TRIM33

Anne-Sophie Gallouet , Federica Ferri , Vanessa Petit , Aude Parcelier , Daniel Lewandowski et al.
Oncotarget, 2017, 8 (3), pp.5111-5122. ⟨10.18632/oncotarget.13872⟩
Article dans une revue hal-03677820 v1

Combinatorial DNA methylation codes at repetitive elements

Ali Hamiche , Christophe Papin , Abdulkhaleg Ibrahim , Stéphanie Le Gras , Amandine Velt et al.
Genome Research, 2017, 27 (6), pp.934-946. ⟨10.1101/gr.213983.116⟩
Article dans une revue hal-03484320 v1

Histone propionylation is a mark of active chromatin

Adam Kebede , Anna Nieborak , Lara Zorro Shahidian , Stephanie Le Gras , Florian Richter et al.
Nature Structural and Molecular Biology, 2017, 24 (12), pp.1048-1056. ⟨10.1038/nsmb.3490⟩
Article dans une revue hal-03985649 v1
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A targeted next-generation sequencing assay for the molecular diagnosis of genetic disorders with orodental involvement

Megana K. Prasad , Véronique Geoffroy , Serge Vicaire , Bernard Jost , Michael Dumas et al.
Journal of Medical Genetics, 2016, 53 (2), pp.98--110. ⟨10.1136/jmedgenet-2015-103302⟩
Article dans une revue hal-01272929 v1
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Genome-wide mapping of collier In vivo binding sites highlights its hierarchical position in different transcription regulatory networks

Mathilde de Taffin , Yannick Carrier , Laurence Dubois , Laetitia Bataillé , Anaïs Painset et al.
PLoS ONE, 2015, 10 (7), ⟨10.1371/journal.pone.0133387⟩
Article dans une revue hal-02634392 v1
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Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells

Patrick Laurette , Thomas Strub , Dana Koludrovic , Céline Keime , Stéphanie Le Gras et al.
eLife, 2015, 4 (Art. n°e06857), ⟨10.7554/eLife.06857⟩
Article dans une revue hal-04238122 v1

Neuronal identity genes regulated by super-enhancers are preferentially down-regulated in the striatum of Huntington's disease mice

M. Achour , S. Le Gras , C. Keime , F. Parmentier , F. Lejeune et al.
Human Molecular Genetics, 2015, 24 (12), pp.3481-3496. ⟨10.1093/hmg/ddv099⟩
Article dans une revue hal-02106606 v1
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A Brn2–Zic1 axis specifies the neuronal fate of retinoic-acid-treated embryonic stem cells

Sylvia Urban , Dominique Kobi , Marie Ennen , Diana Langer , Stéphanie Le Gras et al.
Journal of Cell Science, 2015, 128 (13), pp.2303-2318. ⟨10.1242/jcs.168849⟩
Article dans une revue hal-04217954 v1
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Ikaros mediates gene silencing in T cells through Polycomb repressive complex 2

Attila Oravecz , Apostol Apostolov , Katarzyna Polak , Bernard Jost , Stéphanie Le Gras et al.
Nature Communications, 2015, 6, ⟨10.1038/ncomms9823⟩
Article dans une revue hal-04248892 v1
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TAF4, a subunit of transcription factor II D, directs promoter occupancy of nuclear receptor HNF4A during post-natal hepatocyte differentiation

Daniil Alpern , Diana Langer , Benoit Ballester , Stephanie Le Gras , Christophe Romier et al.
eLife, 2014, 3, pp.308-312. ⟨10.7554/eLife.03613.001⟩
Article dans une revue hal-01404987 v1
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Efficient strategy for the molecular diagnosis of intellectual disability using targeted high-throughput sequencing

Claire Redin , Bénédicte Gérard , Julia Lauer , Yvan Herenger , Jean Muller et al.
Journal of Medical Genetics, 2014, 51 (11), pp.724-736. ⟨10.1136/jmedgenet-2014-102554⟩
Article dans une revue hal-04542582 v1

The tumor suppressor Ikaros shapes the repertoire of notch target genes in T cells

Anne-Solen Geimer Le Lay , Attila Oravecz , Jérôme Mastio , Claudia Jung , Patricia Marchal et al.
Science Signaling, 2014, 7 (317), ⟨10.1126/scisignal.2004545⟩
Article dans une revue hal-04248893 v1
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Sumoylation at chromatin governs coordinated repression of a transcriptional program essential for cell growth and proliferation

Hélène Neyret-Kahn , Moussa Benhamed , Tao Ye , Stéphanie Le Gras , Jack-Christophe Cossec et al.
Genome Research, 2013, 23 (10), pp.1563-1579. ⟨10.1101/gr.154872.113⟩
Article dans une revue pasteur-03235077 v1
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An integrated diagnosis strategy for congenital myopathies.

Johann Böhm , Nasim Vasli , Edoardo Malfatti , Stéphanie Le Gras , Claire Feger et al.
PLoS ONE, 2013, 8 (6), pp.e67527. ⟨10.1371/journal.pone.0067527⟩
Article dans une revue inserm-00904638 v1

20 ans après: a second mutation in MAOA identified by targeted high-throughput sequencing in a family with altered behavior and cognition

Amélie Piton , Hélène Poquet , Claire Redin , Alice Masurel , Julia Lauer et al.
European Journal of Human Genetics, 2013, 22 (6), pp.776-783. ⟨10.1038/ejhg.2013.243⟩
Article dans une revue hal-04970577 v1

Chromatin signatures and retrotransposon profiling in mouse embryos reveal regulation of LINE-1 by RNA

Anas Fadloun , Stéphanie Le Gras , Bernard Jost , Céline Ziegler-Birling , H Takahashi et al.
Nature Structural and Molecular Biology, 2013, 20 (3), pp.332-338. ⟨10.1038/nsmb.2495⟩
Article dans une revue hal-04119882 v1

Trim24-repressed VL30 retrotransposons regulate gene expression by producing noncoding RNA

Benjamin Herquel , Khalid Ouararhni , Igor Martianov , Stéphanie Le Gras , Tao Ye et al.
Nature Structural and Molecular Biology, 2013, 20 (3), pp.339-346. ⟨10.1038/nsmb.2496⟩
Article dans une revue hal-04217904 v1
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Targeted high-throughput sequencing for diagnosis of genetically heterogeneous diseases: efficient mutation detection in Bardet-Biedl and Alström Syndromes

Claire Redin , Stéphanie Le Gras , Oussema Mhamdi , Véronique Geoffroy , Corinne Stoetzel et al.
Journal of Medical Genetics, 2012, 49 (8), pp.502-512. ⟨10.1136/jmedgenet-2012-100875⟩
Article dans une revue hal-04542601 v1

Targeted high-throughput sequencing for diagnosis of genetically heterogeneous diseases: efficient mutation detection in Bardet-Biedl and Alstrom syndromes

Claire Redin , Stéphanie Le Gras , Oussema Mhamdi , Véronique Geoffroy , Corinne Stoetzel et al.
Journal of Medical Genetics, 2012, 49 (8), pp.502-512. ⟨10.1136/jmedgenet-2012-100875⟩
Article dans une revue hal-04238123 v1

Samaritan myopathy, an ultimately benign congenital myopathy, is caused by a RYR1 mutation

Johann Böhm , Esther Leshinsky-Silver , Stéphane Vassilopoulos , Stéphanie Le Gras , Tally Lerman-Sagie et al.
Acta Neuropathologica, 2012, 124 (4), pp.575-581. ⟨10.1007/s00401-012-1007-3⟩
Article dans une revue hal-05007113 v1
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Next generation sequencing for molecular diagnosis of neuromuscular diseases

Nasim Vasli , Johann Böhm , Stéphanie Le Gras , Jean Muller , Cécile Pizot et al.
Acta Neuropathologica, 2012, 124 (2), pp.273 - 283. ⟨10.1007/s00401-012-0982-8⟩
Article dans une revue hal-05004632 v1

Essential role of microphthalmia transcription factor for DNA replication, mitosis and genomic stability in melanoma

T Strub , S. Giuliano , T Ye , C Bonet , C. Keime et al.
Oncogene, 2011, 30 (20), pp.2319-2332. ⟨10.1038/onc.2010.612⟩
Article dans une revue inserm-02530755 v1

Bcl11b represses a mature T-cell gene expression program in immature CD4(+)CD8(+) thymocytes

Philippe Kastner , Susan Chan , Walter Vogel , Ling-Juan Zhang , Acharawan Topark-Ngarm et al.
European Journal of Immunology, 2010, 40 (8), pp.2143-2154. ⟨10.1002/eji.200940258⟩
Article dans une revue hal-04009063 v1
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Cell-specific occupancy of an extended repertoire of CREM and CREB binding loci in male germ cells.

Igor Martianov , Mohamed-Amin Choukrallah , Arnaud Krebs , Tao Ye , Stephanie Legras et al.
BMC Genomics, 2010, 11 (1), pp.530. ⟨10.1186/1471-2164-11-530⟩
Article dans une revue inserm-00663886 v1

Oncogenic activation of the Notch1 gene by deletion of its promoter in Ikaros-deficient T-ALL

Robin Jeannet , Jérôme Mastio , Alejandra Macias Garcia , Attila Oravecz , Todd Ashworth et al.
Blood, 2010, 116 (25), pp.5443-5454. ⟨10.1182/blood-2010-05-286658⟩
Article dans une revue hal-04065527 v1

Genome-wide analysis of POU3F2/BRN2 promoter occupancy in human melanoma cells reveals Kitl as a novel regulated target gene

Dominique Kobi , Anne-Lise Steunou , Doulaye Dembélé , Stéphanie Le Gras , Lionel Larue et al.
Pigment Cell & Melanoma research, 2010, 23 (3), pp.404-418. ⟨10.1111/j.1755-148X.2010.00697.x⟩
Article dans une revue istex hal-04042071 v1

A Strategy for Direct Mapping and Identification of Mutations by Whole-Genome Sequencing

Steven Zuryn , Stéphanie Le Gras , Karine Jamet , Sophie Jarriault
Genetics, 2010, 186 (1), pp.427-430. ⟨10.1534/genetics.110.119230⟩
Article dans une revue hal-03036122 v1