Stéphanie Robin

Documents

Publications

	AskoR, an R package for easy RNA-Seq data analysis. Susete Alves Carvalho , Kévin Gazengel , Anthony Bretaudeau , Stéphanie Robin , Stéphanie Daval Journées Ouvertes en Biologie, Informatique et Mathématiques (Jobim), Jun 2023, Tours, France. pp.263, 2018, JOBIM2023. ⟨10.1080/02664763.2018.1454894⟩ Conference poster hal-04720296v1
	BIPAA, Bioinformatics Platform for the Agroecosystems Arthropods. Stéphanie Robin , Fabrice Legeai , Anthony Bretaudeau JOBIM 2023 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2023, Plouzané (Brest Métropole), France. pp.1-1, 2023 Conference poster hal-04176786v1
	BIPAA, Bioinformatics Platform for the Agroecosystems Arthropods. Stéphanie Robin , Anthony Bretaudeau , Fabrice Legeai The 11th international workshop on Molecular Biology and Genetics of the Lepidoptera, Aug 2022, Kolympari, Greece Conference poster hal-04176792v1
	AskoR, an R package for easy RNA-Seq data analysis illustrated by the analysis of plant/pathogen/microbiote interactions. Susete Alves Carvalho , Kévin Gazengel , Masanelli Sylvin , Anthony Bretaudeau , Stéphanie Robin Journées Ouvertes en Biologie, Informatique et Mathématiques (Jobim), Jul 2022, Rennes, France Conference poster hal-04720279v1
	BIPAA, Bioinformatics Platform for the Agroecosystems Arthropods. Stéphanie Robin , Anthony Bretaudeau , Fabrice Legeai Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM), Jul 2018, Marseille (FR), France Conference poster hal-04176797v1

	Transcriptomic basis of sex loss in the pea aphid M D Huguet , Stéphanie Robin , Sylvie Hudaverdian , Sylvie Tanguy , Nathalie Prunier-Leterme BMC Genomics, 2024, Bmc Genomics, 25 (1), pp.202. ⟨10.1186/s12864-023-09776-6⟩ Journal articles hal-04484084v1
	Identification of a viral gene essential for the genome replication of a domesticated endogenous virus in ichneumonid parasitoid wasps Ange Lorenzi , Fabrice Legeai , Véronique Jouan , Pierre-Alain Girard , Michael R Strand PLoS Pathogens, 2024, 20 (4), pp.e1011980. ⟨10.1371/journal.ppat.1011980⟩ Journal articles hal-04572197v1
	Genome-wide identification of lncRNAs associated with viral infection in Spodoptera frugiperda Stéphanie Robin , Fabrice Legeai , Véronique Jouan , Mylène Ogliastro , Isabelle Darboux Journal of General Virology, 2023, 104 (2), ⟨10.1099/jgv.0.001827⟩ Journal articles hal-04006610v1
	Spodoptera littoralis genome mining brings insights on the dynamic of expansion of gustatory receptors in polyphagous noctuidae Camille Meslin , Pauline Mainet , Nicolas Montagné , Stéphanie Robin , Fabrice Legeai G3, 2022, 12 (8), pp.jkac131. ⟨10.1093/g3journal/jkac131⟩ Journal articles hal-03713321v1
	Masculinization of the X-chromosome in aphid soma and gonads Julie Jaquiéry , Jean-Christophe Simon , Stéphanie Robin , Gautier Richard , Jean Peccoud Peer Community Journal, 2022, 2, pp.e53. ⟨10.24072/pcjournal.166⟩ Journal articles hal-03999192v1
	Proteo-Trancriptomic Analyses Reveal a Large Expansion of Metalloprotease-Like Proteins in Atypical Venom Vesicles of the Wasp Meteorus pulchricornis (Braconidae) Jean-Luc Gatti , Maya Belghazi , Fabrice Legeai , Marc Ravallec , Marie Frayssinet Toxins, 2021, 13 (7), pp.1-36. ⟨10.3390/toxins13070502⟩ Journal articles hal-03292170v1
	Global patterns in genomic diversity underpinning the evolution of insecticide resistance in the aphid crop pest Myzus persicae Kumar Saurabh Singh , Erick Cordeiro , Bartlomiej Troczka , Adam Pym , Joanna Mackisack Communications Biology, 2021, 4 (1), pp.847. ⟨10.1038/s42003-021-02373-x⟩ Journal articles hal-03313531v1
	Comparative transcriptome analysis at the onset of speciation in a mimetic butterfly—The Ithomiini Melinaea marsaeus Florence Piron-Prunier , Emma Persyn , Fabrice Legeai , Melanie Mcclure , Camille Meslin Journal of Evolutionary Biology, 2021, 34 (11), pp.1704-1721. ⟨10.1111/jeb.13940⟩ Journal articles hal-03381525v1
	Genomic architecture of endogenous ichnoviruses reveals distinct evolutionary pathways leading to virus domestication in parasitic wasps Fabrice F. Legeai , Bernardo F Santos , Stéphanie Robin , Anthony Bretaudeau , Rebecca B Dikow BMC Biology, 2020, 18 (1), pp.1-23. ⟨10.1186/s12915-020-00822-3⟩ Journal articles hal-02918230v1
	Positive selection alone is sufficient for whole genome differentiation at the early stage of speciation process in the fall armyworm Ki Woong Nam , Sandra Nhim , Stéphanie Robin , Anthony Bretaudeau , Nicolas Nègre BMC Evolutionary Biology, 2020, 20 (1), ⟨10.1186/s12862-020-01715-3⟩ Journal articles hal-03099735v1
	Functional insights from the GC-poor genomes of two aphid parasitoids, "Aphidius ervi" and "Lysiphlebus fabarum" Alice Dennis , Gabriel Ballesteros , Stéphanie Robin , Lukas Schrader , Jens Bast BMC Genomics, 2020, 21 (Art. 376), pp.1-27. ⟨10.1186/s12864-020-6764-0⟩ Journal articles hal-02649295v1
	Selection following Gene Duplication Shapes Recent Genome Evolution in the Pea Aphid Acyrthosiphon pisum Rosa Fernández , Marina Marcet-Houben , Fabrice Legeai , Gautier Richard , Stéphanie Robin Molecular Biology and Evolution, 2020, 37 (9), pp.2601-2615. ⟨10.1093/molbev/msaa110⟩ Journal articles hal-03065353v1
	The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest Claude Rispe , Fabrice Legeai , Paul Nabity , Rosa Fernández , Arinder Arora BMC Biology, 2020, 18 (1), pp.90. ⟨10.1186/s12915-020-00820-5⟩ Journal articles hal-02917617v1
	RNA interference identifies domesticated viral genes involved in assembly and trafficking of virus-derived particles in ichneumonid wasps Ange Lorenzi , Marc Ravallec , Magali Eychenne , Véronique Jouan , Stéphanie Robin PLoS Pathogens, 2019, 15 (12), pp.e1008210. ⟨10.1371/journal.ppat.1008210⟩ Journal articles hal-02483831v1
	Evidence for an ichnovirus machinery in parasitoids of coleopteran larvae Stéphanie Robin , Marc Ravallec , Marie Frayssinet , James Whitfield , Véronique Jouan Virus Research, 2019, 263, pp.189-206. ⟨10.1016/j.virusres.2019.02.001⟩ Journal articles hal-02059774v1
	Genetics of canine olfaction and receptor diversity. Pascale Quignon , Maud Rimbault , Stéphanie Robin , Francis Galibert Mammalian Genome, 2012, 23 (1-2), pp.132-43. ⟨10.1007/s00335-011-9371-1⟩ Journal articles inserm-00643175v1
	cAMP and IP3 signaling pathways in HEK293 cells transfected with canine olfactory receptor genes. Naïma Benbernou , Stéphanie Robin , Sandrine Tacher , Maud Rimbault , Michaëlle Rakotomanga Journal of Heredity, 2011, 102 Suppl 1, pp.S47-61. ⟨10.1093/jhered/esr033⟩ Journal articles inserm-00620796v1
	RNA profiles of rat olfactory epithelia: individual and age related variations. Maud Rimbault , Stéphanie Robin , Amaury Vaysse , Francis Galibert BMC Genomics, 2009, 10 (1), pp.572. ⟨10.1186/1471-2164-10-572⟩ Journal articles inserm-00439670v1
	Genetic diversity of canine olfactory receptors. Stéphanie Robin , Sandrine Tacher , Maud Rimbault , Amaury Vaysse , Stéphane Dréano BMC Genomics, 2009, 10 (1), pp.21. ⟨10.1186/1471-2164-10-21⟩ Journal articles inserm-00355613v1
	In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein M. Seleme , Olivier Disson , Stéphanie Robin , Christine Brun , Danielle Teninges Nucleic Acids Research, 2005, 33 (2), pp.776-785. ⟨10.1093/nar/gki221⟩ Journal articles hal-04176712v1
	Gene Silencing Triggered by Non-LTR Retrotransposons in the Female Germline of Drosophila melanogaster Stéphanie Robin , Séverine Chambeyron , Alain Bucheton , Isabelle Busseau Genetics, 2003, 164 (2), pp.521-531. ⟨10.1093/genetics/164.2.521⟩ Journal articles hal-04176743v1
	Chimeric RNA transposition intermediates of the I factor produce precise retrotransposed copies Séverine Chambeyron , Christine Brun , Stéphanie Robin , Alain Bucheton , Isabelle Busseau Nucleic Acids Research, 2002, 30 (15), pp.3387-3394. ⟨10.1093/nar/gkf456⟩ Journal articles hal-04176758v1

	Analyse des données RNA-seq (RNA-sequencing) Stéphanie Robin , Fabrice Legeai Principes des techniques de biologie moléculaire et génomique : 3e édition revue et augmentée, Quae, 2018, Savoir Faire, 978-2-7592-2389-3 Book sections hal-03318969v1
	Canine olfactory genetics (chap 17) P. Quignon , Stéphanie Robin , F. Galibert Ostrander, E. A., Ruvinsky, A. (eds.). The genetics of the dog, CAB International, pp.375-393, 2012, ⟨10.1079/9781845939403.0375⟩ Book sections hal-01117500v1

	AskoR, A R Package for Easy RNASeq Data Analysis Susete Alves Carvalho , Kévin Gazengel , Anthony Bretaudeau , Stéphanie Robin , Stéphanie Daval IECE 2021 - 1st International Electronic Conference on Entomology, Jul 2021, Virtual, France. pp.1-8, ⟨10.3390/IECE-10646⟩ Conference papers hal-03347665v1
	The virus particles of Bathyplectes spp., parasitoids of the alfalfa weevil, are related to ichnoviruses Stéphanie Robin , Marc Ravallec , Marie Frayssinet , James B. Whitfield , Véronique Jouan 6. International Entomophagous Insects Conference, Sep 2019, Perugia, Italy Conference papers hal-02463374v1
	Identification of differentially expressed long non-coding RNAs (lncRNAs) in response to viral infection in S. frugiperda hemocytes Fabrice Legeai , Stéphanie Robin , Marie Helene Ogliastro , Isabelle Darboux 10. International Workshop on Molecular Biology and Genetics of the Lepidoptera, Aug 2018, Kolympari, Greece Conference papers hal-01988642v1
	Spodoptera genomes in the BIPAA information system Stéphanie Robin , Fabrice Legeai International Conference on Management of Destructive Agricultural Pests Spodoptera (Noctuidae), Nov 2017, Chongqing, China Conference papers hal-04176810v1

	Spodoptera littoralis genome mining brings insights on the dynamic of expansion of gustatory receptors in polyphagous noctuidae Camille Meslin , Pauline Mainet , Nicolas Montagné , Stéphanie Robin , Fabrice Legeai 2021 Preprints, Working Papers, ... hal-04706490v1
	Conserved and specific genomic features of endogenous polydnaviruses revealed by whole genome sequencing of two ichneumonid wasps Fabrice Legeai , Bernardo F. Santos , Stéphanie Robin , Anthony Bretaudeau , Rebecca B. Dikow 2019 Preprints, Working Papers, ... hal-02788577v1
	Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarum Alice B. Dennis , Gabriel I. Ballesteros , Stéphanie Robin , Lukas Schrader , Jens Bast 2019 Preprints, Working Papers, ... hal-02788571v1
	Genomic differentiation is initiated without physical linkage among targets of divergent selection in Fall armyworms Ki Woong Nam , Sandra Nhim , Stéphanie Robin , Anthony Bretaudeau , Nicolas Nègre 2018 Preprints, Working Papers, ... hal-02788771v1

	SfruDB database :Spodoptera frugiperda genome assembly, Version 5 Ki Woong Nam , Anthony Bretaudeau , Stéphanie Robin 2018 Other publications hal-02154692v1
	LepidoDB Information system Emmanuelle d'Alençon , Fabrice Legeai , Anthony Bretaudeau , Stéphanie Robin , Nicolas Negre 2017 Other publications hal-02154691v1
	L'utilisation de marqueurs génétiques polymorphes (RAPDs) en entomologie évolutive et appliquée Myriam Harry , Stéphanie Robin , Daniel Lachaise 1998, pp.9-32. ⟨10.1080/21686351.1998.12277758⟩ Other publications hal-04176767v1

Stéphanie Robin

Publications

AskoR, an R package for easy RNA-Seq data analysis.

BIPAA, Bioinformatics Platform for the Agroecosystems Arthropods.

BIPAA, Bioinformatics Platform for the Agroecosystems Arthropods.

AskoR, an R package for easy RNA-Seq data analysis illustrated by the analysis of plant/pathogen/microbiote interactions.

BIPAA, Bioinformatics Platform for the Agroecosystems Arthropods.

Transcriptomic basis of sex loss in the pea aphid

Identification of a viral gene essential for the genome replication of a domesticated endogenous virus in ichneumonid parasitoid wasps

Genome-wide identification of lncRNAs associated with viral infection in Spodoptera frugiperda

Spodoptera littoralis genome mining brings insights on the dynamic of expansion of gustatory receptors in polyphagous noctuidae

Masculinization of the X-chromosome in aphid soma and gonads

Proteo-Trancriptomic Analyses Reveal a Large Expansion of Metalloprotease-Like Proteins in Atypical Venom Vesicles of the Wasp Meteorus pulchricornis (Braconidae)

Global patterns in genomic diversity underpinning the evolution of insecticide resistance in the aphid crop pest Myzus persicae

Comparative transcriptome analysis at the onset of speciation in a mimetic butterfly—The Ithomiini Melinaea marsaeus

Genomic architecture of endogenous ichnoviruses reveals distinct evolutionary pathways leading to virus domestication in parasitic wasps

Positive selection alone is sufficient for whole genome differentiation at the early stage of speciation process in the fall armyworm

Functional insights from the GC-poor genomes of two aphid parasitoids, "Aphidius ervi" and "Lysiphlebus fabarum"

Selection following Gene Duplication Shapes Recent Genome Evolution in the Pea Aphid Acyrthosiphon pisum

The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

RNA interference identifies domesticated viral genes involved in assembly and trafficking of virus-derived particles in ichneumonid wasps

Evidence for an ichnovirus machinery in parasitoids of coleopteran larvae

Genetics of canine olfaction and receptor diversity.

cAMP and IP3 signaling pathways in HEK293 cells transfected with canine olfactory receptor genes.

RNA profiles of rat olfactory epithelia: individual and age related variations.

Genetic diversity of canine olfactory receptors.

In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein

Gene Silencing Triggered by Non-LTR Retrotransposons in the Female Germline of Drosophila melanogaster

Chimeric RNA transposition intermediates of the I factor produce precise retrotransposed copies

Analyse des données RNA-seq (RNA-sequencing)

Canine olfactory genetics (chap 17)

AskoR, A R Package for Easy RNASeq Data Analysis

The virus particles of Bathyplectes spp., parasitoids of the alfalfa weevil, are related to ichnoviruses

Identification of differentially expressed long non-coding RNAs (lncRNAs) in response to viral infection in S. frugiperda hemocytes

Spodoptera genomes in the BIPAA information system

Spodoptera littoralis genome mining brings insights on the dynamic of expansion of gustatory receptors in polyphagous noctuidae

Conserved and specific genomic features of endogenous polydnaviruses revealed by whole genome sequencing of two ichneumonid wasps

Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarum

Genomic differentiation is initiated without physical linkage among targets of divergent selection in Fall armyworms

SfruDB database :Spodoptera frugiperda genome assembly, Version 5

LepidoDB Information system

L'utilisation de marqueurs génétiques polymorphes (RAPDs) en entomologie évolutive et appliquée