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Susete Alves Carvalho

Researcher identifiers
  • IdHAL susete-alves-carvalho


Specialties: bioinformatics, bioanalysis, (meta-)genomics/transcriptomics.


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Rhizocarpon geographicum Lichen Discloses a Highly Diversified Microbiota Carrying Antibiotic Resistance and Persistent Organic Pollutant Tolerance

Alice Miral , Adam Kautsky , Susete Alves Carvalho , Ludovic Cottret , Anne-Yvonne Guillerm-Erckelboudt
Microorganisms, 2022, 10 (9), pp.1859. ⟨10.3390/microorganisms10091859⟩
Journal articles hal-04204410v2
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Comparative transcriptome analysis at the onset of speciation in a mimetic butterfly—The Ithomiini Melinaea marsaeus

Florence Piron-Prunier , Emma Persyn , Fabrice Legeai , Melanie Mcclure , Camille Meslin
Journal of Evolutionary Biology, 2021, 34 (11), pp.1704-1721. ⟨10.1111/jeb.13940⟩
Journal articles hal-03381525v1
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Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads

Yvan Le Bras , Olivier Collin , Cyril Monjeaud , Vincent Lacroix , Eric Rivals
GigaScience, 2016, 5 (1), ⟨10.1186/s13742-015-0105-2⟩
Journal articles hal-01280238v1
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SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population

Gilles Boutet , Susete Alves Carvalho , Matthieu Falque , Pierre Peterlongo , Emeline Lhuillier
BMC Genomics, 2016, 17 (1), pp.121. ⟨10.1186/s12864-016-2447-2⟩
Journal articles hal-01275696v1
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De novo construction of a “Gene-space” for diploid plant genome rich in repetitive sequences by an iterative Process of Extraction and Assembly of NGS reads (iPEA protocol) with limited computing resources

Christelle Aluome , Gregoire G. Aubert , Susete Alves Carvalho , Marie-Christine Le Paslier , Judith Burstin
BMC Research Notes, 2016, 9 (1), pp.1-9. ⟨10.1186/s13104-016-1903-z⟩
Journal articles hal-02636294v1

Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species

Susete Alves Carvalho , Gregoire G. Aubert , Sebastien Carrere , Corinne Cruaud , Anne-Lise Brochot
The Plant Journal, 2015, 84 (1), pp.1-19. ⟨10.1111/tpj.12967⟩
Journal articles hal-02631162v1
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AskoR, A R Package for Easy RNASeq Data Analysis

Susete Alves Carvalho , Kévin Gazengel , Anthony Bretaudeau , Stéphanie Robin , Stéphanie Daval
IECE 2021 - 1st International Electronic Conference on Entomology, Jul 2021, Virtual, France. pp.1-8, ⟨10.3390/IECE-10646⟩
Conference papers hal-03347665v1
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Le pois, espèce modèle ?

Judith Burstin , Nadim N. Tayeh , Anthony Klein , Jonathan Kreplak , Françoise Jacquin
1. Rencontres Francophones sur les Légumineuses (RFL1), Institut National de la Recherche Agronomique (INRA). FRA., May 2016, Dijon, France
Conference papers hal-02741352v1
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Pea genomic tools for functional and structural approaches

Nadim N. Tayeh , Susete Alves Carvalho , Christelle Aluome , Sébastien Carrere , Jonathan Kreplak
Mendel's legacy - 150 years of the genius of genetics, Masaryk University. CZE., Sep 2015, Brno, Czech Republic
Conference papers hal-02743963v1

Pea in the genomic era

Judith Burstin , Susete Alves Carvalho , Christelle Aluome , Nadim Tayeh , Anne-Lise Brochot
Séminaire IFR AIB (Agrobiosciences, Interactions & Biodiversité), Feb 2015, Toulouse, France, 24 février 2015, France
Conference papers hal-01536570v1

Pea in the genomic era

Susete Alves Carvalho , Christelle Aluome , Gregoire G. Aubert , Corinne Cruaud , Anthony Klein
2. Adam Kondorosi Symposium "Frontiers in Legume Biology",, Dec 2014, Gif-sur-Yvette, France
Conference papers hal-02797923v1