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Unexpected diversity and ecological significance of uncultivable large virus-like particles in aquatic environments
Hermine Billard
,
Maxime Fuster
,
François Enault
,
Jean-François Carrias
,
Léa Fargette
et al.
Article dans une revue
hal-05351916v1
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Widespread and intron-rich mirusviruses are predicted to reproduce in nuclei of unicellular eukaryotes
Sofia Medvedeva
,
Ulysse Guyet
,
Eric Pelletier
,
Hans-Joachim Ruscheweyh
,
Shinichi Sunagawa
et al.
Article dans une revue
pasteur-05442839v1
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Complex Genomes of Early Nucleocytoviruses Revealed by Ancient Origins of Viral Aminoacyl-tRNA Synthetases
Soichiro Kijima
,
Hiroyuki Hikida
,
Tom Delmont
,
Morgan Gaïa
,
Hiroyuki Ogata
Article dans une revue
hal-05363609v1
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Discovery of Eremiobacterota with <i>nifH</i> homologues in tundra soil
Igor S Pessi
,
Tom O Delmont
,
Jonathan P Zehr
,
Jenni Hultman
Article dans une revue
hal-04776164v1
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Bioprospecting marine microbial genomes to improve biotechnology
A. Murat Eren
,
Tom Delmont
Article dans une revue
hal-05363602v1
|
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The defensome of complex bacterial communities
Angelina Beavogui
,
Auriane Lacroix
,
Nicolas Wiart
,
Julie Poulain
,
Tom O Delmont
et al.
Article dans une revue
hal-04406189v2
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Genomic adaptation of giant viruses in polar oceans
Lingjie Meng
,
Tom Delmont
,
Morgan Gaïa
,
Eric Pelletier
,
Antonio Fernàndez-Guerra
et al.
Article dans une revue
hal-04385851v1
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Mirusviruses link herpesviruses to giant viruses
Morgan Gaïa
,
Lingjie Meng
,
Eric Pelletier
,
Patrick Forterre
,
Chiara Vanni
et al.
Article dans une revue
pasteur-04085734v1
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Tracing the invertebrate herpesviruses in the global sequence datasets
Umberto Rosani
,
Morgan Gaia
,
Tom O Delmont
,
Mart Krupovic
Article dans une revue
pasteur-04162270v1
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In-depth characterization of denitrifier communities across different soil ecosystems in the tundra
Igor Pessi
,
Sirja Viitamäki
,
Anna-Maria Virkkala
,
Eeva Eronen-Rasimus
,
Tom Delmont
et al.
Article dans une revue
cea-04425162v1
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Restructuring of plankton genomic biogeography in the surface ocean under climate change
Paul Frémont
,
Marion Gehlen
,
Mathieu Vrac
,
Jade Leconte
,
Tom O. Delmont
et al.
Article dans une revue
insu-03659872v1
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Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean
Tom Delmont
,
Morgan Gaia
,
Damien Hinsinger
,
Paul Frémont
,
Chiara Vanni
et al.
Article dans une revue
hal-03872935v2
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Giant viruses encode actin-related proteins
Violette da Cunha
,
Morgan Gaia
,
Hiroyuki Ogata
,
Olivier Jaillon
,
Tom O Delmont
et al.
Article dans une revue
cea-04281384v1
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Unifying the known and unknown microbial coding sequence space
Chiara Vanni
,
Matthew Schechter
,
Silvia Acinas
,
Albert Barberán
,
Pier Luigi Buttigieg
et al.
Article dans une revue
cea-04425144v1
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Priorities for ocean microbiome research
Andre Abreu
,
Etienne Bourgois
,
Adam Gristwood
,
Romain Troublé
,
Silvia Acinas
et al.
Article dans une revue
hal-03781942v1
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Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
Daniel Richter
,
Romain Watteaux
,
Thomas Vannier
,
Jade Leconte
,
Paul Frémont
et al.
Article dans une revue
hal-02399723v2
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The Ocean Gene Atlas v2.0: online exploration of the biogeography and phylogeny of plankton genes
Caroline Vernette
,
Julien Lecubin
,
Pablo Sánchez
,
(team) Tara Oceans Coordinators
,
Shinichi Sunagawa
et al.
Article dans une revue
hal-03696136v1
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Heterotrophic bacterial diazotrophs are more abundant than their cyanobacterial counterparts in metagenomes covering most of the sunlit ocean
Tom Delmont
,
Juan José Pierella Karlusich
,
Iva Veseli
,
Jessika Fuessel
,
A. Murat Eren
et al.
Article dans une revue
hal-03480646v1
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Discovery of viral myosin genes with complex evolutionary history within plankton
Soichiro Kijima
,
Tom O. Delmont
,
Urara Miyazaki
,
Morgan Gaia
,
Hisashi Endo
et al.
Article dans une revue
hal-04288984v1
|
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Community-led, integrated, reproducible multi-omics with anvi'o
A. Murat Eren
,
Evan Kiefl
,
Alon Shaiber
,
Iva Veseli
,
Samuel E. Miller
et al.
Article dans une revue
cea-04284764v1
|
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Discovery of nondiazotrophic Trichodesmium species abundant and widespread in the open ocean
Tom O. Delmont
Article dans une revue
cea-04284763v1
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Gut Microbiota Linked with Reduced Fear of Humans in Red Junglefowl Has Implications for Early Domestication
Lara Puetz
,
Tom Delmont
,
Ostaizka Aizpurua
,
Chunxue Guo
,
Guojie Zhang
et al.
Article dans une revue
hal-04376251v1
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Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean
Hiroto Kaneko
,
Romain Blanc-Mathieu
,
Hisashi Endo
,
Samuel Chaffron
,
Tom Delmont
et al.
Article dans une revue
hal-03097258v3
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Mitotic recombination between homologous chromosomes drives genomic diversity in diatoms
Petra Bulankova
,
Mirna Sekulić
,
Denis Jallet
,
Charlotte Nef
,
Cock van Oosterhout
et al.
Article dans une revue
hal-03333507v1
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Genome-resolved metagenomics suggests a mutualistic relationship between $Mycoplasma$ and salmonid hosts
Jacob A. Rasmussen
,
Kasper R. Villumsen
,
David A. Duchene
,
Lara C. Puetz
,
Tom O. Delmont
et al.
Article dans une revue
hal-04288991v1
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Early-life microbial restitution reduces colitis risk promoted by antibiotic-induced gut dysbiosis in interleukin 10(-/-) mice
Jun Miyoshi
,
Sawako Miyoshi
,
Tom O. Delmont
,
Candace Cham
,
Sonny T. M. Lee
et al.
Article dans une revue
hal-04288988v1
|
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VirSorter2: a multi-classifier, expert-guided approach to detect diverse DNA and RNA viruses
Jiarong R. Guo
,
Ben Bolduc
,
Ahmed A. Zayed
,
Arvind Varsani
,
Guillermo Dominguez-Huerta
et al.
Article dans une revue
cea-04284766v1
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Transcriptome reconstruction and functional analysis of eukaryotic marine plankton communities via high-throughput metagenomics and metatranscriptomics
Alexey Vorobev
,
Marion Dupouy
,
Quentin Carradec
,
Tom O. Delmont
,
Anita Annamalé
et al.
Article dans une revue
hal-02573621v1
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Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
Alon Shaiber
,
Amy D. Willis
,
Tom O. Delmont
,
Simon Roux
,
Lin-Xing Chen
et al.
Article dans une revue
cea-04300151v1
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Effects of iron and light availability on phytoplankton photosynthetic properties in the Ross Sea
Anne-Carlijn Alderkamp
,
Gert L. Van Dijken
,
Kate E. Lowry
,
Kate M. Lewis
,
Hannah L. Joy-Warren
et al.
Article dans une revue
cea-04307620v1
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Co-occurring genomic capacity for anaerobic methane and dissimilatory sulfur metabolisms discovered in the Korarchaeota
Luke J. Mckay
,
Mensur Dlakic
,
Matthew W. Fields
,
Tom O. Delmont
,
A. Murat Eren
et al.
Article dans une revue
cea-04309464v1
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Genomic variation in microbial populations inhabiting the marine subseafloor at deep-sea hydrothermal vents
Rika E. Anderson
,
Julie Reveillaud
,
Emily Reddington
,
Tom O. Delmont
,
A. Murat Eren
et al.
Article dans une revue
hal-02622497v1
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Functional Basis of Microorganism Classification
Chengsheng Zhu
,
Tom O. Delmont
,
Timothy M. Vogel
,
Yana Bromberg
Article dans une revue
hal-01589154v1
|
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Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics
Tom O. Delmont
,
A. Murat Eren
,
Lorrie Maccario
,
Emmanuel Prestat
,
Özcan C. Esen
et al.
Article dans une revue
hal-01589179v1
|
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Characterization of new bacterial catabolic genes and mobile genetic elements by high throughput genetic screening of a soil metagenomic library
Samuel Jacquiod
,
Sandrine Demanèche
,
Laure Franqueville
,
Luka Ausec
,
Zhuofei Xu
et al.
Article dans une revue
istex
hal-00989480v1
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Microbial community development and unseen diversity recovery in inoculated sterile soil
Tom Delmont
,
Davide Francioli
,
Sophie Jacquesson
,
Sandra Laoudi
,
Alban Mathieu
et al.
Article dans une revue
hal-01928111v1
|
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Large-Scale Metagenomic-Based Study of Antibiotic Resistance in the Environment
Joseph Nesme
,
Sébastien Cecillon
,
Tom Delmont
,
Jean-Michel Monier
,
Timothy M. Vogel
et al.
Article dans une revue
hal-00988678v1
|
|
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Life on Human Surfaces: Skin Metagenomics
Alban Mathieu
,
Tom Delmont
,
Timothy M. Vogel
,
Patrick Robe
,
Renaud Nalin
et al.
Article dans une revue
hal-00846134v1
|
|
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Mastering methodological pitfalls for surviving the metagenomic jungle.
Tom Delmont
,
Pascal Simonet
,
Timothy M. Vogel
Article dans une revue
istex
hal-00846141v1
|
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Structure, fluctuation and magnitude of a natural grassland soil metagenome.
Tom Delmont
,
Emmanuel Prestat
,
Kevin P. Keegan
,
Michael Faubladier
,
Patrick Robe
et al.
Article dans une revue
hal-00747243v1
|
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Describing microbial communities and performing global comparisons in the 'omic era.
Tom Delmont
,
Pascal Simonet
,
Timothy M. Vogel
Article dans une revue
hal-00747239v1
|
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Metagenomic mining for microbiologists
Tom Delmont
,
Cédric Malandain
,
Emmanuel Prestat
,
Catherine Larose
,
Jean-Michel Monier
et al.
Article dans une revue
hal-00747250v1
|
|
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Metagenomic comparison of direct and indirect soil DNA extraction approaches
Tom Delmont
,
Patrick Robe
,
Ian M. Clark
,
Pascal Simonet
,
Timothy M Vogel
Article dans une revue
istex
hal-00629399v1
|
|
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Metagenomic exploration of antibiotic resistance in soil
Jean-Michel Monier
,
Sandrine Demanèche
,
Tom Delmont
,
Alban Mathieu
,
Timothy M Vogel
et al.
Article dans une revue
istex
hal-00629407v1
|
|
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Accessing the Soil Metagenome for Studies of Microbial Diversity
Tom Delmont
,
Patrick Robe
,
Sébastien Cecillon
,
Ian M. Clark
,
Florentin Constancias
et al.
Article dans une revue
hal-00579312v1
|