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Vincent Guillemot

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Researcher identifiers
  • IdHAL vguillemot
  • ORCID 0000-0002-7421-0655
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I am currently a biostatistician in the Hub of Bioinformatics and Biostatistics. Before that, I worked at the Brain and Spine Institute (Paris, France), NeuroSpin (Saclay, France) and in the Ludwig Maximilian University (Munich, Germany). My fields of expertise include biostatistics, multivariate statistics, data visualization, statistical data integration and machine learning. My teaching activities range from the introduction to basic concepts in statistics to theoretical aspects in convex optimization.
Je suis actuellement biostatisticien au sein du Hub de bio-informatique et biostatistique. Avant cela, j'ai travaillé à l'Institut du Cerveau (Paris, France), NeuroSpin (Saclay, France) et à l'Université Ludwig Maximilian (Munich, Allemagne). Mes domaines d'expertise incluent la biostatistique, les statistiques multivariées, la visualisation des données, l'intégration de données statistiques et l'apprentissage automatique. Mes activités d'enseignement vont de l'introduction aux concepts de base en statistique jusqu'aux aspects théoriques de l'optimisation convexe.


R programming Statistics Data Integration


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High prevalence of small intestine bacteria overgrowth and asymptomatic carriage of enteric pathogens in stunted children in Antananarivo, Madagascar

Jean-Marc Collard , Lova Andrianonimiadana , Azimdine Habib , Maheninasy Rakotondrainipiana , Prisca Andriantsalama
PLoS Neglected Tropical Diseases, 2022, 16 (5), pp.e0009849. ⟨10.1371/journal.pntd.0009849⟩
Journal articles pasteur-03677601v1
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Sparse Multiple Factor Analysis, sparse STATIS, and sparse DiSTATIS with applications to sensory evaluation

Ju‐chi Yu , Carlos Gómez-Corona , Hervé Abdi , Vincent Guillemot
Journal of Chemometrics, 2022, pp.e3443. ⟨10.1002/cem.3443⟩
Journal articles pasteur-04096426v1
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The genetic architecture of language functional connectivity

Yasmina Mekki , Vincent Guillemot , Hervé Lemaître , Amaia Carrión-Castillo , Stephanie Forkel
NeuroImage, 2022, 249, pp.118795. ⟨10.1016/j.neuroimage.2021.118795⟩
Journal articles hal-03566120v1
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Multitrait GWAS to connect disease variants and biological mechanisms

Hanna Julienne , Vincent Laville , Zachary Mccaw , Zihuai He , Vincent Guillemot
PLoS Genetics, 2021, 17 (8), pp.e1009713. ⟨10.1371/journal.pgen.1009713⟩
Journal articles pasteur-03526210v1
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Host genetic control of Natural Killer cell diversity revealed in the Collaborative Cross

Magali S J Dupont , Vincent Guillemot , Pascal Campagne , Nicolas Serafini , Solenne Marie
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (10), ⟨10.1073/pnas.2018834118⟩
Journal articles pasteur-03144287v1
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Dichotomous metabolic networks govern human ILC2 proliferation and function

Laura Surace , Jean-Marc Doisne , Carys A Croft , Anna Thaller , Pedro Escoll
Nature Immunology, 2021, 22 (11), pp.1367-1374. ⟨10.1038/s41590-021-01043-8⟩
Journal articles pasteur-03499188v1
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JASS: command line and web interface for the joint analysis of GWAS results

Hanna Julienne , Pierre Lechat , Vincent Guillemot , Carla Lasry , Chunzi Yao
NAR Genomics and Bioinformatics, 2020, 2 (1), pp.lqaa003. ⟨10.1093/nargab/lqaa003⟩
Journal articles pasteur-02635247v1
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Immune response profiling of patients with spondyloarthritis reveals signalling networks mediating TNF-blocker function in vivo

Silvia Menegatti , Vincent Guillemot , Eleonora Latis , Hanane Yahia-Cherbal , Daniela Mittermüller
Annals of the Rheumatic Diseases, 2020, annrheumdis-2020-218304, ⟨10.1136/annrheumdis-2020-218304⟩
Journal articles pasteur-03046847v1

Adjusting for Principal Components of Molecular Phenotypes Induces Replicating False Positives

Andy Dahl , Vincent Guillemot , Joel Mefford , Hugues Aschard , Noah Zaitlen
Genetics, 2019, 211 (4), pp.1179-1189. ⟨10.1534/genetics.118.301768⟩
Journal articles pasteur-03278622v1
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Continuation of Nesterov’s Smoothing for Regression with Structured Sparsity in High-Dimensional Neuroimaging

Fouad Hadj-Selem , Tommy Lofstedt , Elvis Dohmatob , Vincent Frouin , Mathieu Dubois
IEEE Transactions on Medical Imaging, inPress, 2018, ⟨10.1109/TMI.2018.2829802⟩
Journal articles cea-01883286v1
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Modeling a linkage between blood transcriptional expression and activity in brain regions to infer the phenotype of schizophrenia patients

El Chérif Ibrahim , Vincent Guillemot , Magali Comte , Arthur Tenenhaus , Xavier Yves Zendjidjian
npj Schizophrenia, 2017, 3, pp.27. ⟨10.1038/s41537-017-0027-3⟩
Journal articles hal-01583472v1

Covariate selection for association screening in multiphenotype genetic studies

Hugues Aschard , Vincent Guillemot , Bjarni Vilhjalmsson , Chirag Patel , David Skurnik
Nature Genetics, 2017, 49 (12), pp.1789-1795. ⟨10.1038/ng.3975⟩
Journal articles pasteur-03278705v1
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Transcriptome Analysis of Peripheral Blood in Chronic Inflammatory Demyelinating Polyradiculoneuropathy Patients Identifies TNFR1 and TLR Pathways in the IVIg Response

Alexandra Richard , Jean-Christophe Corvol , Rabab Debs , Pauline Reach , Khadija Tahiri
Medicine, 2016, 95 (19), pp.e3370. ⟨10.1097/MD.0000000000003370⟩
Journal articles hal-01319866v1
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Clinical-genetic model predicts incident impulse control disorders in Parkinson's disease

Julia Kraemmer , Kara Smith , Daniel Weintraub , Vincent Guillemot , Mike A. Nalls
Journal of Neurology, Neurosurgery and Psychiatry, 2016, ⟨10.1136/jnnp-2015-312848⟩
Journal articles hal-01306745v1

Hypomorphic variants of cationic amino acid transporter 3 in males with autism spectrum disorders

Caroline Nava , Johanna Rupp , Jean-Paul Boissel , Cyril Mignot , Agnès Rastetter
Amino Acids, 2015, 47 (12), pp.2647-2658. ⟨10.1007/s00726-015-2057-3⟩
Journal articles hal-01191525v1

Variable Selection for Generalized Canonical Correlation Analysis

Arthur Tenenhaus , Cathy Philippe , Vincent Guillemot , Kim-Anh Lê Cao , Jacques Grill
Biostatistics, 2014, 15 (3), pp.569-583. ⟨10.1093/biostatistics/kxu001⟩
Journal articles hal-01071432v1

Significant correlation between a set of genetic polymorphisms and a functional brain network revealed by feature selection and sparse Partial Least Squares.

Vincent Guillemot , Vincent Frouin , Philippe Pinel , Christophe Lalanne , Laura Trinchera
NeuroImage, 2012, 63 (1), pp.11-24. ⟨10.1016/j.neuroimage.2012.06.061⟩
Journal articles hal-00750902v1

Graph Constrained Discriminant Analysis: A New Method for the Integration of a Graph into a Classification Process

Vincent Guillemot , Arthur Tenenhaus , Laurent Le Brusquet , Vincent Frouin
PLoS ONE, 2011, 6 (10), pp.e26146. ⟨10.1371/journal.pone.0026146⟩
Journal articles hal-00648336v1

Use of pretransformation to cope with extreme values in important candidate features

Anne-Laure Boulesteix , Vincent Guillemot , W. Sauerbrei
Biometrical Journal, 2011, 53 (4), pp.673-688
Journal articles hal-00623395v1
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Over-optimism in bioinformatics: an illustration

Monika Jelizarow , Vincent Guillemot , Arthur Tenenhaus , K. Strimmer , Anne-Laure Boulesteix
Bioinformatics, 2010, 26, pp.1990-1998
Journal articles hal-00514107v1

Gene Association Networks from Microarray Data Using a Regularized Estimation of Partial Correlation Based on the PLS Regression

Arthur Tenenhaus , Vincent Guillemot , Xavier Gidrol , Vincent Frouin
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2010, 7 (2), pp.251-262
Journal articles hal-00486420v1

Distance between homologous chromosomes results from chromosome positioning constraints

Claire Heride , Michelle Ricoul , Kiên Kiêu , Johann von Hase , Vincent Guillemot
Journal of Cell Science, 2010, 123, pp.4063-4075. ⟨10.1242/jcs.066498⟩
Journal articles hal-02663555v1

Etude de la Pénalisation GraphNet en Analyse de Données Multi-blocs

Annabelle Beaudoin , Natalia Pietrosemoli , Cathy Philippe , Hervé Abdi , Vincent Guillemot
53èmes Journées de Statistiques, Jun 2022, Lyon, France
Conference papers pasteur-04131938v1
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Introducing group-sparsity and orthogonality constraints in RGCCA

Vincent Guillemot , Arnaud Gloaguen , Arthur Tenenhaus , Cathy Philippe , Hervé Abdi
JdS2021 : 52èmes Journées de Statistique, Jun 2021, Nice, France
Conference papers hal-03264640v1
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Sparse Multiple Correspondence Analysis

Vincent Guillemot , Julie Le Borgne , Arnaud Gloaguen , Arthur Tenenhaus , Gilbert Saporta
52èmes Journées de Statistique, Société Française de Statistique (SFdS), May 2020, Nice, France. pp.830-835
Conference papers pasteur-03037346v1
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Network regularization in imaging genetics improves prediction performances and model interpretability on Alzheimers's disease

Nicolas Guigui , C. Philippe , A. Gloaguen , S. Karkar , V. Guillemot
ISBI 2019 - Proceedings of the IEEE International Symposium on Biomedical Imaging, Apr 2019, Venice, Italy. ⟨10.1109/ISBI.2019.8759593⟩
Conference papers cea-02016625v1
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Multiblock analysis of omics and imaging data with variable selection

Cathy Philippe , Arthur Tenenhaus , Vincent Guillemot , Jacques Grill , Vincent Frouin
Journées RITS 2015, Mar 2015, Dourdan, France. pp.P28-29 Section imagerie génétique
Conference papers inserm-01145569v1

Multiblock Logistic Regression for High Dimensional Data

Cathy Philippe , Arthur Tenenhaus , Vincent Frouin , Vincent Guillemot
PLS 2014, May 2014, Paris, France
Conference papers hal-01103734v1

Structured variable selection for generalized canonical correlation analysis

Tommy Lofstedt , Fouad Hadj-Selem , Vincent Guillemot , Cathy Philippe , Edouard Duchesnay
PLS’14, May 2014, Paris, France
Conference papers hal-01084048v1

A multi-block approach in imaging genetics

Vincent Guillemot , Arthur Tenenhaus , Edouard Duchesnay , Jean-Baptiste Poline , Vincent Frouin
9th International Imaging Genetics Conference, Jan 2013, Irvine, California, United States. pp.Poster 13
Conference papers hal-00862310v1

Shrinkage Covariance Estimation Incorporating Prior Biological Knowledge with Applications to High-Dimensional Data

Vincent Guillemot , Monika Jelizarow , Arthur Tenenhaus , Anne-Laure Boulesteix
58th World Statistics Congress of the International Statistical Institute (ISI'11), Aug 2011, Dublin, Ireland. 16 p
Conference papers hal-00647792v1
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Une variante des tests de sphéricité pour l'adéquation de données transcriptomiques à un graphe de régulations génétiques

Vincent Guillemot , Arthur Tenenhaus , Vincent Frouin
Journée Ouverte en Biologie et Mathématiques (JOBIM'09), Jun 2009, Nantes, France. pp.219-220
Conference papers hal-00421943v1
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Grouping levels of exposure with same observable effects before class prediction in toxicogenomics.

Vincent Guillemot , Cathy Philippe , Arthur Tenenhaus , Jérôme Rollin , Vincent Frouin
IEEE Computer Society, Biotechno08, International Conference on Bioinformatics, and Biomedical Technologies, Digital Library, 2008, France. pp. 164-169, ⟨10.1109/BIOTECHNO.2008.17⟩
Conference papers hal-00321714v1
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Graph-Constrained Discriminant Analysis of functional genomics data

Vincent Guillemot , Laurent Le Brusquet , Arthur Tenenhaus , Vincent Frouin
IEEE International Conference on Bioinformatics and Biomedicine Worshops, Nov 2008, Philadelphia, United States. pp. 207-210, ⟨10.1109/BIBMW.2008.4686237⟩
Conference papers hal-00346450v1

Identification of differentially expressed genes: a comparison between wrapper and filter methods

Vincent Guillemot , Vincent Frouin , Laurent Le Brusquet , Gilles Fleury
Proceedings of the International Workshop on Machine Learning in Systems Biology, Sep 2007, Evry, France
Conference papers hal-00257928v1