AGNES THIERRY

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RNA Pol II-based regulations of chromosome folding

Christophe Chapard , Nathalie Bastié , Axel Cournac , Laura Chaptal , Henri Mboumba et al.

Cell Genomics, 2025, ⟨10.1016/j.xgen.2025.100970⟩

Article dans une revue hal-05121450v1
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Parasitic plasmids are anchored to inactive regions of eukaryotic chromosomes through a nucleosome signal

Fabien Girard , Antoine Even , Agnès Thierry , Myriam Ruault , Léa Meneu et al.

EMBO Journal, 2025, 44 (7), pp.2134 - 2156. ⟨10.1038/s44318-025-00389-1⟩

Article dans une revue hal-05121404v1
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Phages with a broad host range are common across ecosystems

Amaury Bignaud , Devon Conti , Agnès Thierry , Jacques Serizay , Karine Labadie et al.

Nature Microbiology, 2025, 10, pp.2537-2549. ⟨10.1038/s41564-025-02108-2⟩

Article dans une revue pasteur-05269627v1
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HU promotes higher order chromosome organization and influences DNA replication rates in Streptococcus pneumoniae

Maria-Vittoria Mazzuoli , Renske van Raaphorst , Louise S Martin , Florian P Bock , Agnès Thierry et al.

Nucleic Acids Research, 2025, 53 (8), pp.gkaf312. ⟨10.1093/nar/gkaf312⟩

Article dans une revue hal-05114065v1
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Sequence-dependent activity and compartmentalization of foreign DNA in a eukaryotic nucleus

Léa Meneu , Christophe Chapard , Jacques Serizay , Alex Westbrook , Etienne Routhier et al.

Science, 2025, 387 (6734), pp.eadm9466. ⟨10.1126/science.adm9466⟩

Article dans une revue hal-04937691v1
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A virally encoded tRNA neutralizes the PARIS antiviral defence system

Nathaniel Burman , Svetlana Belukhina , Florence Depardieu , Royce Wilkinson , Mikhail Skutel et al.

Nature, 2024, 634 (8033), pp.424-431. ⟨10.1038/s41586-024-07874-3⟩

Article dans une revue pasteur-05116009v1
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Absence of chromosome axis protein recruitment prevents meiotic recombination chromosome-wide in the budding yeast Lachancea kluyveri

Sylvain Legrand , Asma Saifudeen , Hélène Bordelet , Julien Vernerey , Arnaud Guille et al.

Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (12), pp.e2312820121. ⟨10.1073/pnas.2312820121⟩

Article dans une revue pasteur-04603593v1

Sister chromatid cohesion halts DNA loop expansion

Nathalie Bastié , Christophe Chapard , Axel Cournac , Sanae Nejmi , Henri Mboumba et al.

Molecular Cell, 2024, 84 (6), pp.1139-1148.e5. ⟨10.1016/j.molcel.2024.02.004⟩

Article dans une revue pasteur-04603601v1
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Transcription-induced domains form the elementary constraining building blocks of bacterial chromosomes

Amaury Bignaud , Charlotte Cockram , Céline Borde , Justine Groseille , Eric Allemand et al.

Nature Structural and Molecular Biology, 2024, ⟨10.1038/s41594-023-01178-2⟩

Article dans une revue hal-04468362v1
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Mechanism of homology search expansion during recombinational DNA break repair in Saccharomyces cerevisiae

Agnès Dumont , Nicolas Mendiboure , Jérôme Savocco , Loqmen Anani , Pierrick Moreau et al.

Molecular Cell, 2024, 84 (17), pp.3237-3253.e6. ⟨10.1016/j.molcel.2024.08.003⟩

Article dans une revue hal-04887128v2
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Chromosome-level genome assembly of the European green woodpecker Picus viridis

Thomas Forest , Guillaume Achaz , Martial Marbouty , Amaury Bignaud , Agnès Thierry et al.

G3, 2024, 14 (5), pp.jkae042. ⟨10.1093/g3journal/jkae042⟩

Article dans une revue hal-04572175v1
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Neuroinvasion and anosmia are independent phenomena upon infection with SARS-CoV-2 and its variants

Guilherme Dias de Melo , Victoire Perraud , Flavio Alvarez , Alba Vieites-Prado , Seonhee Kim et al.

Nature Communications, 2023, 14 (1), pp.4485. ⟨10.1038/s41467-023-40228-7⟩

Article dans une revue pasteur-04171251v1
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Synthetic chromosome fusion: Effects on mitotic and meiotic genome structure and function

Jingchuan Luo , Luis A Vale-Silva , Adhithi R Raghavan , Guillaume Mercy , Jonna Heldrich et al.

Cell Genomics, 2023, 3 (11), pp.100439. ⟨10.1016/j.xgen.2023.100439⟩

Article dans une revue pasteur-04603588v1
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Author Correction: Neuroinvasion and anosmia are independent phenomena upon infection with SARS-CoV-2 and its variants

Guilherme Dias de Melo , Victoire Perraud , Flavio Alvarez , Alba Vieites-Prado , Seonhee Kim et al.

Nature Communications, 2023, 14 (1), pp.8024. ⟨10.1038/s41467-023-42800-7⟩

Article dans une revue pasteur-04748399v1
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Depletion or cleavage of cohesin during anaphase differentially affects chromatin structure and segregation

Jonay Garcia-Luis , Hélène Bordelet , Agnès Thierry , Romain Koszul , Luis Aragon

eLife, 2022, 11, pp.e80147. ⟨10.7554/eLife.80147⟩

Article dans une revue pasteur-04603581v1
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Nucleosome positioning on large tandem DNA repeats of the ’601’ sequence engineered in Saccharomyces cerevisiae

Astrid Lancrey , Alexandra Joubert , Evelyne Duvernois-Berthet , Etienne Routhier , Saurabh Raj et al.

Journal of Molecular Biology, 2022, 434 (7), pp.167497. ⟨10.1016/j.jmb.2022.167497⟩

Article dans une revue hal-03343705v2
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Cohesin regulates homology search during recombinational DNA repair

Aurèle Piazza , Hélène Bordelet , Agnès Dumont , Agnès Thierry , Jérôme Savocco et al.

Nature Cell Biology, 2021, 23 (11), pp.1176-1186. ⟨10.1038/s41556-021-00783-x⟩

Article dans une revue hal-03427219v1
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The Formation of Neochromosomes during Experimental Evolution in the Yeast Saccharomyces cerevisiae

Agnès Thierry , Varun Khanna , Bernard Dujon

Genes, 2021, 12 (11), pp.1678. ⟨10.3390/genes12111678⟩

Article dans une revue pasteur-03684574v1
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MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut

Martial Marbouty , Agnès Thierry , Gael A. Millot , Romain Koszul

eLife, 2021, 10, pp.e60608. ⟨10.7554/eLife.60608⟩

Article dans une revue pasteur-03369735v1
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Euryarchaeal genomes are folded into SMC-dependent loops and domains, but lack transcription-mediated compartmentalization

Charlotte Cockram , Agnès Thierry , Aurore Gorlas , Roxane Lestini , Romain Koszul

Molecular Cell, 2021, 81 (3), pp.459-472.e10. ⟨10.1016/j.molcel.2020.12.013⟩

Article dans une revue hal-03379787v1
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Generation of gene-level resolution chromosome contact maps in bacteria and archaea

Charlotte Cockram , Agnès Thierry , Romain Koszul

STAR Protocols, 2021, 2 (2), pp.100512. ⟨10.1016/j.xpro.2021.100512⟩

Article dans une revue pasteur-03376845v1
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Regulation of Cohesin-Mediated Chromosome Folding by Eco1 and Other Partners

Lise Dauban , Rémi Montagne , Agnès Thierry , Luciana Lazar-Stefanita , Nathalie Bastié et al.

Molecular Cell, 2020, 77 (6), pp.1279-1293.e4. ⟨10.1016/j.molcel.2020.01.019⟩

Article dans une revue hal-03064572v1
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Condensin-Mediated Chromosome Folding and Internal Telomeres Drive Dicentric Severing by Cytokinesis

Thomas Guerin , Claire Béneut , Natalja Barinova , Virginia López , Luciana Lazar-Stefanita et al.

Molecular Cell, 2019, 75 (1), pp.131-144.e3. ⟨10.1016/j.molcel.2019.05.021⟩

Article dans une revue pasteur-02866762v1
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Macrotene chromosomes provide insights to a new mechanism of high-order gene amplification in eukaryotes

Agnès Thierry , Varun Khanna , Sophie Créno , Ingrid Lafontaine , Laurence Ma et al.

Nature Communications, 2015, 6, pp.6154. ⟨10.1038/ncomms7154⟩

Article dans une revue hal-01116452v1
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The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest.

Gotthard Kunze , Claude Gaillardin , Małgorzata Czernicka , Pascal Durrens , Tiphaine Martin et al.

Biotechnology for Biofuels, 2014, 7 (1), pp.66. ⟨10.1186/1754-6834-7-66⟩

Article dans une revue pasteur-00988609v1
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Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization

Véronique Leh Louis , Laurence Despons , Anne Friedrich , Tiphaine Martin , Pascal Durrens et al.

G3, 2012, 2 (2), pp.299 - 311. ⟨10.1534/g3.111.000745⟩

Article dans une revue hal-00679348v1
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Megasatellites: a new class of large tandem repeats discovered in the pathogenic yeast Candida glabrata

Guy-Franck Richard , Agnès Thierry , Bernard Dujon

Cellular and Molecular Life Sciences, 2010, 67 (5), pp.671-6. ⟨10.1007/s00018-009-0216-y⟩

Article dans une revue pasteur-01370699v1
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Comparative genomics of protoploid Saccharomycetaceae

Jean-Luc Souciet , Bernard Dujon , Claude Gaillardin , Mark Johnston , Philippe V Baret et al.

Genome Research, 2009, 19, pp.1696-1709. ⟨10.1101/gr.091546.109⟩

Article dans une revue inria-00407511v1
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Large-scale Exploration of Growth Inhibition Caused by Overexpression of Genomic Fragments in Saccharomyces cerevisiae

Jeanne Boyer , Gwenaël Badis , Cécile Fairhead , Emmanuel Talla , Florence Hantraye et al.

Genome Biology, 2004, 5 (9), pp.R72. ⟨10.1186/gb-2004-5-9-r72⟩

Article dans une revue pasteur-02868108v1

XI. Yeast sequencing reports. The sequence of a 9·3 kb segment located on the left arm of the yeast chromosome XI reveals five open reading frames including the CCE1 gene and putative products related to MYO2 and to the ribosomal protein L10

Steve Pascolo , Marjan Ghazvini , Jeanne Boyer , Laurence Colleaux , Agnès Thierry et al.

Yeast, 1992, 8 (11), pp.987-995. ⟨10.1002/yea.320081109⟩

Article dans une revue hal-02090246v1

Purification and characterization of the in vitro activity of I-Sce I, a novel and highly specific endonuclease encoded by a group I intron

Claude Monteilhet , Arnaud Perrin , Agnès Thierry , Laurence Colleaux , Bernard Dujon

Nucleic Acids Research, 1990, 18 (6), pp.1407-13. ⟨10.1093/nar/18.6.1407⟩

Article dans une revue hal-02090248v1
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Generating High-Resolution Hi-C Contact Maps of Bacteria

Agnès Thierry , Charlotte Cockram

Hi-C Data Analysis, 2301, Springer US, pp.183-195, 2021, Methods in Molecular Biology, 978-1-0716-1390-0. ⟨10.1007/978-1-0716-1390-0_9⟩

Chapitre d'ouvrage pasteur-03686079v1