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Augustin C. Ogier

42
Documents
Researcher identifiers
  • IdHAL augustinogier
  • ORCID 0000-0001-9178-9964
  • Google Scholar : https://scholar.google.com/citations?user=cy7gT9MAAAAJ

Presentation

Personnal website: <https://pageperso.lis-lab.fr/augustin.ogier/>
Site web personnel : <https://pageperso.lis-lab.fr/augustin.ogier/>

Publications

The Road Toward Reproducibility of Parametric Mapping of the Heart: A Technical Review

Augustin C. Ogier , Aurelien Bustin , Hubert Cochet , Juerg Schwitter , Ruud van Heeswijk et al.
Frontiers in Cardiovascular Medicine, 2022, 9, ⟨10.3389/fcvm.2022.876475⟩
Journal articles hal-03858418v1

Characterization of surface motion patterns in highly deformable soft tissue organs from dynamic MRI: An application to assess 4D bladder motion

Karim Makki , Amine Bohi , Augustin C. Ogier , Marc Emmanuel Bellemare
Computer Methods and Programs in Biomedicine, 2022, 218, pp.106708. ⟨10.1016/j.cmpb.2022.106708⟩
Journal articles hal-03658072v1

Whole-muscle fat analysis identifies distal muscle end as disease initiation site in facioscapulohumeral muscular dystrophy

Linda Heskamp , Augustin C. Ogier , Bendahan David , Arend Heerschap
Communications Medicine, 2022, 2 (1), pp.155. ⟨10.1038/s43856-022-00217-1⟩
Journal articles hal-03885547v1
Image document

Assessment of in vivo bone microarchitecture changes in an anti-TNFα treated psoriatic arthritic patient

Enrico Soldati , Lucas Escoffier , Sophie Gabriel , Augustin C. Ogier , Christophe Chagnaud et al.
PLoS ONE, 2021, 16 (5), pp.e0251788. ⟨10.1371/journal.pone.0251788⟩
Journal articles hal-03233052v1
Image document

Impaired aerobic capacity and premature fatigue preceding muscle weakness in the skeletal muscle Tfam KO mouse model

Benjamin Chatel , Sylvie Ducreux , Zeina Harhous , Nadia Bendridi , I. Varlet et al.
Disease Models & Mechanisms, 2021, 14 (9), ⟨10.1242/dmm.048981⟩
Journal articles hal-03335080v1
Image document

Overview of MR Image Segmentation Strategies in Neuromuscular Disorders

Augustin C. Ogier , Marc-Adrien Hostin , Marc-Emmanuel Bellemare , David Bendahan
Frontiers in Neurology, 2021, 12, pp.625308. ⟨10.3389/fneur.2021.625308⟩
Journal articles hal-03181363v1

Fat fraction distribution in lower limb muscles of patients with CMT1A

Joachim Bas , Augustin C. Ogier , Arnaud Le Troter , Emilien Delmont , Benjamin Leporq et al.
Neurology, 2020, 94 (14), pp.e1480-e1487. ⟨10.1212/WNL.0000000000009013⟩
Journal articles hal-02473561v1

Quantitative assessment of sciatic nerve changes in CMT1A patients using magnetic resonance neurography

Etienne Fortanier , Augustin C. Ogier , Emilien Delmont , Marie‐noëlle Lefebvre , Patrick Viout et al.
European Journal of Neurology, 2020, 27 (8), pp.1382-1389. ⟨10.1111/ene.14303⟩
Journal articles hal-02617417v1
Image document

Supervised segmentation framework for evaluation of diffusion tensor imaging indices in skeletal muscle

Laura Secondulfo , Augustin C. Ogier , Jithsa Monte , Vincent Aengevaeren , David Bendahan et al.
NMR in Biomedicine, In press, ⟨10.1002/nbm.4406⟩
Journal articles hal-02957980v1

A Quantitative muscle MRI Study of Patients with Sporadic Inclusion Body Myositis

Behnaz Ansari , Emmanuelle Salort-Campana , Augustin C. Ogier , Arnaud Le Troter , Benjamin de Sainte Marie et al.
Muscle & nerve. Supplement., 2020, 61 (4), pp.496-503. ⟨10.1002/mus.26813⟩
Journal articles hal-02444963v1

Deep learning‐based fully automatic segmentation of wrist cartilage in MR images

Ekaterina Brui , Aleksandr Efimtcev , Vladimir Fokin , Remi Fernandez , Anatoliy Levchuk et al.
NMR in Biomedicine, 2020, 33 (8), ⟨10.1002/nbm.4320⟩
Journal articles hal-02570930v1
Image document

Muscle alterations induced by electrostimulation are lower at short quadriceps femoris length

Alexandre Fouré , Augustin C. Ogier , Maxime Guye , Julien Gondin , David Bendahan et al.
European Journal of Applied Physiology, 2019, 120, pp.325 - 335. ⟨10.1007/s00421-019-04277-5⟩
Journal articles hal-02426083v1

A novel segmentation framework dedicated to the follow‐up of fat infiltration in individual muscles of patients with neuromuscular disorders

Augustin C. Ogier , Linda Heskamp , Constance P. Michel , Alexandre A Fouré , Marc-Emmanuel Bellemare et al.
Magnetic Resonance in Medicine, 2019, 83 (5), pp.1825-1836. ⟨10.1002/mrm.28030⟩
Journal articles hal-02362978v1

Spatial difference can occur between activated and damaged muscle areas following electrically‐induced isometric contractions

Alexandre Foure , Arnaud Troter , Augustin C. Ogier , Maxime Guye , Julien Gondin et al.
The Journal of Physiology, 2019, 597 (16), pp.4227-4236. ⟨10.1113/JP278205⟩
Journal articles hal-02438449v1

Ultrahigh-Field Multimodal MRI Assessment of Muscle Damage

Alexandre A Fouré , Lauriane Pini , Stanislas Rappacchi , Augustin C. Ogier , Jean-Camille Mattei et al.
Journal of Magnetic Resonance Imaging, 2019, 49 (3), pp.904-906. ⟨10.1002/jmri.26222⟩
Journal articles hal-02459104v1
Image document

In vivo characterization of skeletal muscle function in nebulin‐deficient mice

Charlotte Gineste , Augustin C. Ogier , Isabelle Varlet , Zaynab Hourani , Monique Bernard et al.
Muscle & Nerve, 2019, 61, pp.416 - 424. ⟨10.1002/mus.26798⟩
Journal articles hal-02434597v1

L-tyrosine supplementation does not ameliorate skeletal muscle dysfunction in zebrafish and mouse models of dominant skeletal muscle α-actin nemaline myopathy

Adriana Messineo , Charlotte Gineste , Tamar Sztal , Elyshia Mcnamara , Christophe A Vilmen et al.
Scientific Reports, 2018, 8 (1), ⟨10.1038/s41598-018-29437-z⟩
Journal articles hal-02425848v1

Diffusion Properties and 3D Architecture of Human Lower Leg Muscles Assessed with Ultra-High-Field-Strength Diffusion-Tensor MR Imaging and Tractography: Reproducibility and Sensitivity to Sex Difference and Intramuscular Variability

Alexandre Fouré , Augustin C. Ogier , Arnaud Le Troter , Christophe Vilmen , Thorsten Feiweier et al.
Radiology, 2018, 287 (2), pp.592-607. ⟨10.1148/radiol.2017171330⟩
Journal articles hal-02000373v1

Combining loss functions for deep learning bladder segmentation on dynamic MRI

Marc-Adrien Hostin , Augustin C. Ogier , Nicolas Pirró , Marc-Emmanuel Bellemare
2021 IEEE EMBS International Conference on Biomedical and Health Informatics (BHI), Jul 2021, Virtual Conference, France. pp.1-4, ⟨10.1109/BHI50953.2021.9508559⟩
Conference papers hal-03327830v1

A new geodesic-based feature for characterization of 3D shapes: application to soft tissue organ temporal deformations

Karim Makki , Amine Bohi , Augustin C. Ogier , Marc-Emmanuel Bellemare
25th International Conference on Pattern Recognition (ICPR2020), Jan 2021, Milan, Italy. ⟨10.1109/ICPR48806.2021.9412922⟩
Conference papers hal-02880284v1

Suivi dynamique 3D des organes pelviens - résultats préliminaires

Augustin C. Ogier , Stanislas Rapacchi , Arnaud Le Troter , Marc-Emmanuel Bellemare
GRETSI, Aug 2019, Lille, France
Conference papers hal-03127903v1

3D Dynamic MRI for Pelvis Observation - a First Step

Augustin C. Ogier , Stanislas Rapacchi , Arnaud Le Troter , Marc-Emmanuel Bellemare
The 16th IEEE International Symposium on Biomedical Imaging (ISBI), Apr 2019, Venice, Italy. pp.1801-1804, ⟨10.1109/ISBI.2019.8759589⟩
Conference papers hal-02195177v1
Image document

Individual muscle segmentation in MR images: A 3D propagation through 2D non-linear registration approaches

Augustin C. Ogier , Michael Sdika , Alexandre Foure , Arnaud Le Troter , David Bendahan et al.
The 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC’17), Jul 2017, Seogwipo, South Korea. pp.317--320, ⟨10.1109/EMBC.2017.8036826⟩
Conference papers hal-01657939v1

Reconstruction et caractérisation 3D des déformations de la vessie

Augustin C. Ogier , Stanislas Rapacchi , Marc-Emmanuel Bellemare
5ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
Conference poster hal-03361799v1
Image document

Fonction de perte basée sur les contours pour la segmentation d’IRM de vessie par apprentissage profond

Marc-Adrien Hostin , Augustin C. Ogier , Marc-Emmanuel Bellemare
5ème congrès scientifique de la Société Francaise de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
Conference poster hal-03366156v1

Muscular fat infiltration in FSHD starts with a ‘‘fat burst’’ near the distal tendon and advances towards the proximal tendon

Linda Heskamp , Augustin C. Ogier , David Bendahan , Arend Heerschap
The 37th Annual Scientific Meeting of European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Sep 2020, Online, Austria
Conference poster hal-02958319v1

Muscular fat infiltration in FSHD starts with a “fat burst” near the distal tendon and advances towards the proximal tendon

Linda Heskamp , Augustin C. Ogier , David Bendahan , Arend Heerschap
International Society for Magnetic Resonance in Medicine (ISMRM), Aug 2020, Online, United States
Conference poster hal-02958325v1

Neurographie IRM quantitative de patients atteints d’une neuropathie de Charcot-Marie-Tooth de type 1A

Etienne Fortanier , Augustin C. Ogier , Marie-Noëlle Lefebvre , Émilien Delmont , David Bendahan et al.
17es Journées de la Société Française de Myologie (JSFM), Nov 2019, Marseille, France
Conference poster hal-02438588v1

Intramuscular Pattern of Fat Infiltration Measured by MRI to Identify Disease Initiation in FSHD

Linda Heskamp , Augustin C. Ogier , Arnaud Le Troter , David Bendahan , Arend Heerschap et al.
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
Conference poster hal-02438643v1

Areas of muscle tissue alteration can differ from activated regions during electrically-induced isometric contractions

Alexandre A Fouré , Arnaud Le Troter , Augustin C. Ogier , David Bendahan
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
Conference poster hal-02438631v1

Intramuscular pattern of fat infiltration measured by MRI to identify disease initiation in FSHD

Linda Heskamp , Augustin C. Ogier , Arnaud Le Troter , David Bendahan , Arend Heerschap et al.
FSH Society International Research Congress, Jun 2019, Marseille, France
Conference poster hal-02438685v1

Fat fraction distribution in lower limb muscles of CMT1A patients: a quantitative MRI study

Joachim Bas , Augustin C. Ogier , Arnaud Le Troter , Émilien Delmont , Benjamin Leporq et al.
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2019, Berlin, Germany
Conference poster hal-02438616v1

Intramuscular variability and sex difference in diffusion properties and 3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography

Alexandre Fouré , Augustin C. Ogier , Arnaud Le Troter , Christophe A Vilmen , Thorsten Feiweier et al.
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Conference poster hal-02000548v1

Méthode de segmentation dédiée au suivi de l'infiltration en graisse des muscles individuels des patients atteints de maladies neuromusculaires

Augustin C. Ogier , Linda Heskamp , Alexandre Fouré , Arnaud Le Troter , Arend Heerschap et al.
16es Journées de la Société Française de Myologie (JSFM), Nov 2018, Brest, France
Conference poster hal-02000469v1

Semi-automatic segmentation of individual muscles in MR images: A new tool dedicated to the follow-up of patients with neuromuscular disorders

Augustin C. Ogier , Linda Heskamp , Alexandre A Fouré , Marc-Emmanuel Bellemare , Arnaud Le Troter et al.
International Society for Magnetic Resonance in Medicine (ISMRM), Jun 2018, Paris, France
Conference poster hal-02000334v1

3D architecture of human lower leg muscles assessed with ultra-high-field diffusion tensor imaging and tractography: sensitivity to sex difference and intramuscular variability

Alexandre Fouré , Augustin C. Ogier , Arnaud Le Troter , Thorsten Feiweier , Christophe A Vilmen et al.
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Conference poster hal-02000587v1

Segmentation des muscles individuels en IRM basée sur des approches de recalage non-linéaire

Augustin C. Ogier , Michaël Sdika , Alexandre Fouré , Arnaud Le Troter , David Bendahan et al.
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
Conference poster hal-01560300v1

Caractérisation de la microarchitecture des muscles de la jambe par IRM à très haut champs magnétique (7T) : Etude de faisabilité et perspectives pour une évaluation précise et non invasive de l’architecture musculaire en 3D

Alexandre Fouré , Pierre Besson , Arnaud Le Troter , Augustin C. Ogier , Christophe A Vilmen et al.
3ème Congrès de la Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Mar 2017, Bordeaux, France
Conference poster hal-02000456v1

An accurate supervised segmentation of 3D individual lower leg muscles from 7T-MRI using label propagation

Augustin C. Ogier , Alexandre Fouré , Michaël Sdika , Arnaud Le Troter , David Bendahan et al.
MYO-MRI, Imaging in Neuromuscular Disease, Nov 2017, Berlin, Germany
Conference poster hal-02000564v1

Segmentation d’images IRM à 7T des muscles individuels basée sur des approches de propagation de masques

Augustin C. Ogier , Alexandre A Fouré , Michaël Sdika , Arnaud Le Troter , David Bendahan et al.
15es Journées de la Société Française de Myologie (JSFM), Nov 2017, Colmar, France
Conference poster hal-02000426v1

3D MRI Segmentation of muscle through 2D multi-label propagation at 7T

Augustin C. Ogier , Alexandre Fouré , Michaël Sdika , Arnaud Le Troter , David Bendahan et al.
The 34th Annual Scientific Meeting - European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), Oct 2017, Barcelone, Spain
Conference poster hal-02000610v1