Burcu Aykac Fas

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Publications

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Publications

Global dynamics behind enzyme catalysis, evolution, and design

Burcu Aykac Fas , Zeynep Erge Akbas Buz , Turkan Haliloglu

Current Opinion in Structural Biology, 2025, 94, pp.103131. ⟨10.1016/j.sbi.2025.103131⟩

Article dans une revue hal-05230577v1
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A Perspective on the prospective use of AI in protein structure prediction

Raphaelle Versini , Sujith Sritharan , Burcu Aykaç Fas , Thibault Tubiana , Sana Zineb Aimeur et al.

Journal of Chemical Information and Modeling, 2024, 64 (1), pp.26-41. ⟨10.1021/acs.jcim.3c01361⟩

Article dans une revue hal-04306436v1
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Structural profiles of the full phagocyte NADPH oxidase unveiled by combining computational biology and experimental knowledge

Sana Aimeur , Burcu Aykac Fas , Xavier Serfaty , Hubert Santuz , Sophie Sacquin-Mora et al.

Journal of Biological Chemistry, 2024, 300 (12), pp.107943. ⟨10.1016/j.jbc.2024.107943⟩

Article dans une revue hal-04834774v1
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Editorial: In Celebration of Women in Science: Biological Modeling and Simulation

Burcu Aykac Fas , Sophie Sacquin-Mora , Elena Papaleo

Frontiers in Molecular Biosciences, 2023, 10, ⟨10.3389/fmolb.2023.1175325⟩

Article dans une revue (compte-rendu de lecture) hal-04128274v1

MAVISp: A Modular Structure-Based Framework for Protein Variant Effects

Matteo Arnaudi , Mattia Utichi , Kristine Degn , Ludovica Beltrame , Simone Scrima et al. Article dans une revue hal-05088746v1

Ubiquitin Interacting Motifs: Duality Between Structured and Disordered Motifs

Matteo Lambrughi , Emiliano Maiani , Burcu Aykac Fas , Gary Shaw , Birthe Kragelund et al.

Frontiers in Molecular Biosciences, 2021, 8, ⟨10.3389/fmolb.2021.676235⟩

Article dans une revue hal-05088750v1
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Critical assessment of protein intrinsic disorder prediction

Marco Necci , Damiano Piovesan , Silvio C E Tosatto , Md Tamjidul Hoque , Ian Walsh et al.

Nature Methods, 2021, 18 (5), pp.472 - 481. ⟨10.1038/s41592-021-01117-3⟩

Article dans une revue hal-03329755v2

The conformational and mutational landscape of the ubiquitin-like marker for autophagosome formation in cancer

Burcu Aykac Fas , Emiliano Maiani , Valentina Sora , Mukesh Kumar , Maliha Mashkoor et al.

Autophagy, 2020, 17 (10), pp.2818-2841. ⟨10.1080/15548627.2020.1847443⟩

Article dans une revue hal-05088739v1

Distinct Allosteric Networks Underlie Mechanistic Speciation of ABC Transporters

Burçin Acar , Jessica Rose , Burcu Aykac Fas , Nir Ben-Tal , Oded Lewinson et al.

Structure, 2020, 28 (6), pp.651-663.e5. ⟨10.1016/j.str.2020.03.014⟩

Article dans une revue hal-05088754v1
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DisProt: intrinsic protein disorder annotation in 2020

András Hatos , Borbála Hajdu-Soltész , Alexander Monzon , Nicolas Palopoli , Lucía Álvarez et al.

Nucleic Acids Research, 2019, ⟨10.1093/nar/gkz975⟩

Article dans une revue hal-02414183v1

Single-molecule probing of the conformational homogeneity of the ABC transporter BtuCD

Min Yang , Nurit Livnat Levanon , Burçin Acar , Burcu Aykac Fas , Gal Masrati et al.

Nature Chemical Biology, 2018, 14 (7), pp.715-722. ⟨10.1038/s41589-018-0088-2⟩

Article dans une revue hal-05088759v1

Dynamic Fluctuations Provide the Basis of a Conformational Switch Mechanism in Apo Cyclic AMP Receptor Protein

Burcu Aykaç Fas , Yusuf Tutar , Türkan Haliloğlu

PLoS Computational Biology, 2013, 9 (7), pp.e1003141. ⟨10.1371/journal.pcbi.1003141⟩

Article dans une revue hal-05088768v1

MODELING THE NADPH OXIDASE (NOX) COMPLEX

Burcu Aykac-Fas , Marie Erard , Oliver Nüsse , Sophie Sacquin-Mora , Antoine Taly

XXIIIème congrès du GGMM, May 2023, Toulouse, France

Poster de conférence hal-04112654v1