Cécile Raynaud

60
Documents
Affiliation actuelle
  • Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403))
Contact

Présentation

Je travaille dans l'équipe Dynamique des Chromosomes (https://www.chromosomedynamics.com/) à l'IPS2. Nous étudions la dynamique de la chromatine et l'impact de son organisation tridimentionnelle sur la régulation de la transcription. Je m'intéresse plus particulièrement au contrôle du stress réplicatif et aux mécanismes impliqués dans la gestion des conflits transcription/réplication.


Publications

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Publications

Tuning of the RBR1-E2F/DP transcriptional module by the F-box protein FBL17

Juliette Espanet , Xiaoning He , Ting Pan , Naomie Gentric , Thomas Potuschak et al.

Science Advances , 2026, 12 (8), ⟨10.1126/sciadv.adz2439⟩

Article dans une revue hal-05522948v1
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LUMINIDEPENDENS orchestrates global transcriptional repression in Arabidopsis

Clara Bergis-Ser , Qingyi Wang , Xiaoning He , Maherun Nisa , Vickie Kaiser et al.

Proceedings of the National Academy of Sciences of the United States of America, 2025, 122 (49), pp.e2527372122. ⟨10.1073/pnas.2527372122⟩

Article dans une revue hal-05394413v1
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Chromatin dynamics and RNA metabolism are double-edged swords for the maintenance of plant genome integrity

Clara Bergis-Ser , Meega Reji , David Latrasse , Catherine Bergounioux , Moussa Benhamed et al.

Nature Plants, In press, 10 (6), pp.857-873. ⟨10.1038/s41477-024-01678-z⟩

Article dans une revue (article de synthèse) hal-04575393v1
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An atlas of the tomato epigenome reveals that KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac distribution

Jing An , Rim Brik Chaouche , Leonardo Pereyra-Bistraín , Hugo Zalzalé , Qingyi Wang et al.

Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (28), pp.e2400737121. ⟨10.1073/pnas.2400737121⟩

Article dans une revue hal-04731984v1

CRUMPLED LEAF supports plastid OUTER ENVELOPE PROTEIN OF 80 KDA complex formation in Arabidopsis

Ryo Yoshimura , Syun Minamikawa , Takamasa Suzuki , Kotaro Goto , David Latrasse et al.

Plant Physiology, 2024, 194 (4), pp.2422-2433. ⟨10.1093/plphys/kiae005⟩

Article dans une revue hal-04477130v1
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Genetic–epigenetic interplay in the determination of plant 3D genome organization

Xiaoning He , Chloé Dias Lopes , Leonardo I Pereyra-Bistrain , Ying Huang , Jing An et al.

Nucleic Acids Research, 2024, 52 (17), pp.10220-10234. ⟨10.1093/nar/gkae690⟩

Article dans une revue hal-04672636v1
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Distinctive and complementary roles of E2F transcription factors during plant replication stress responses

Maherun Nisa , Thomas Eekhout , Clara Bergis , Jose-Antonio Pedroza-Garcia , Xiaoning He et al.

Molecular Plant, 2023, 16 (8), pp.1269-1282. ⟨10.1016/j.molp.2023.07.002⟩

Article dans une revue hal-04204194v1
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HSFA1a modulates plant heat stress responses and alters the 3D chromatin organization of enhancer-promoter interactions

Ying Huang , Jing An , Sanchari Sircar , Clara Bergis , Chloé Dias Lopes et al.

Nature Communications, 2023, 14, ⟨10.1038/s41467-023-36227-3⟩

Article dans une revue hal-04062805v1

The canonical E2Fs together with RETINOBLASTOMA-RELATED are required to establish quiescence during plant development

Magdolna Gombos , Cécile Raynaud , Yuji Nomoto , Eszter Molnár , Rim Brik-Chaouche et al.

Communications Biology, 2023, 6 (1), pp.903. ⟨10.1038/s42003-023-05259-2⟩

Article dans une revue hal-04234543v1
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A hierarchical transcriptional network activates specific CDK inhibitors that regulate G2 to control cell size and number in Arabidopsis

Yuji Nomoto , Hirotomo Takatsuka , Kesuke Yamada , Toshiya Suzuki , Takamasa Suzuki et al.

Nature Communications, 2022, 13 (1), pp.1-16. ⟨10.1038/s41467-022-29316-2⟩

Article dans une revue hal-03666165v1

CmLHP1 proteins play a key role in plant development and sex determination in melon ( Cucumis melo )

Natalia Yaneth Rodriguez‐granados , Juan Sebastian Ramirez‐prado , Rim Brik‐chaouche , Jing An , Deborah Manza‐mianza et al.

The Plant Journal, 2022, 109 (5), pp.1213-1228. ⟨10.1111/tpj.15627⟩

Article dans une revue hal-03633173v1
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RADA-dependent branch migration has a predominant role in plant mitochondria and its defect leads to mtDNA instability and cell cycle arrest

Nicolas Chevigny , Frédérique Weber-Lofti , Anaïs Le Blevenec , Cédric Nadiras , Arnaud Fertet et al.

PLoS Genetics, 2022, 18 (5), pp.e1010202. ⟨10.1371/journal.pgen.1010202⟩

Article dans une revue hal-03721742v1
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Polycomb-dependent differential chromatin compartmentalization determines gene co-regulation in Arabidopsis

Ying Huang , Sanchari Sicar , Juan S Ramirez-Prado , Deborah Manza-Mianza , Javier Antunez-Sanchez et al.

Genome Research, 2021, 31 (7), pp.1-63. ⟨10.1101/gr.273771.120⟩

Article dans une revue hal-03469045v1
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Maize ATR safeguards genome stability during kernel development to prevent early endosperm endocycle onset and cell death

Jose Antonio Pedroza-Garcia , Thomas Eekhout , Ignacio Achon , Maher-Un Nisa , Griet Coussens et al.

The Plant cell, 2021, 33 (8), pp.1-63. ⟨10.1093/plcell/koab158⟩

Article dans une revue hal-03323715v1
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Essential role of the plant DNA polymerase theta for the repair of replication-associated DNA damage under standard and abiotic stress conditions

Maherun Nisa , Clara Bergis , Jose-Antonio Pedroza-Garcia , Jeannine Drouin-Wahbi , Christelle Mazubert et al.

The Plant Journal, 2021, pp.1-40. ⟨10.1111/tpj.15295⟩

Article dans une revue hal-03240087v1
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Involvement of Arabidopsis BIG protein in cell death mediated by Myo- Inositol homeostasis

Quentin Bruggeman , Florence Piron-Prunier , Frederique Tellier , Jean-Denis Faure , David Latrasse et al.

Scientific Reports, In press, 10, pp.11268. ⟨10.1038/s41598-020-68235-4⟩

Article dans une revue hal-02463062v1

A conserved role for γ-tubulin as a regulator of E2F transcription factors

Cécile Raynaud , Maherun Nisa

Journal of Experimental Botany, 2020, 71 (4), pp.1199-1202. ⟨10.1093/jxb/erz557⟩

Article dans une revue hal-03217203v1
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GCN5 modulates salicylic acid homeostasis by regulating H3K14ac levels at the 5′ and 3′ ends of its target genes

Soonkap Kim , Sophie Piquerez , Juan Ramirez-Prado , Emmanouil Mastorakis , Alaguraj Veluchamy et al.

Nucleic Acids Research, 2020, 48 (11), pp.5953-5966. ⟨10.1093/nar/gkaa369⟩

Article dans une revue hal-02889481v1

The matrix revolutions: towards the decoding of the plant chromatin three-dimensional reality

Ying Huang , Natalia Yaneth Rodriguez-Granados , David Latrasse , Cécile Raynaud , Moussa Benhamed et al.

Journal of Experimental Botany, 2020, 71 (17), pp.5129-5147. ⟨10.1093/jxb/eraa322⟩

Article dans une revue hal-03583431v1
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Wheat chromatin architecture is organized in genome territories and transcription factories

Lorenzo Concia , Alaguraj Veluchamy , Juan Ramirez-Prado , Azahara Martin-Ramirez , Ying Huang et al.

Genome Biology, 2020, 21 (1), pp.1-20. ⟨10.1186/s13059-020-01998-1⟩

Article dans une revue hal-02571325v1
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Maize Thymidine Kinase Activity Is Present throughout Plant Development and Its Heterologous Expression Confers Tolerance to an Organellar DNA-Damaging Agent

Manuela Nájera-Martínez , José Antonio Pedroza-García , Luis Jiro Suzuri-Hernández , Christelle Mazubert , Jeannine Drouin-Wahbi et al.

Plants, 2020, 9 (8), pp.930. ⟨10.3390/plants9080930⟩

Article dans une revue hal-03024298v1

A new role for histone demethylases in the maintenance of plant genome integrity

Javier Antunez-Sanchez , Matthew Naish , Juan Sebastian Ramirez Prado , Sho Ohno , Ying Huang et al. Article dans une revue hal-03018538v1
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TCTP and CSN4 control cell cycle progression and development by regulating CULLIN1 neddylation in plants and animals

Léo Betsch , Véronique Boltz , Florian Brioudes , Garance Pontier , Victor Girard et al.

PLoS Genetics, 2019, 15 (1), pp.e1007899. ⟨10.1371/journal.pgen.1007899⟩

Article dans une revue inserm-02155448v1

The Polycomb protein LHP1 regulates Arabidopsis thaliana stress responses through the repression of the MYC2‐dependent branch of immunity

Juan Sebastian Ramirez‐prado , David Latrasse , Natalia Yaneth Rodriguez‐granados , Ying Huang , Deborah Manza‐mianza et al.

The Plant Journal, 2019, 100 (6), pp.1118-1131. ⟨10.1111/tpj.14502⟩

Article dans une revue hal-02351959v1
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Plant DNA Polymerases

Jose-Antonio Pedroza-Garcia , Lieven de Veylder , Cécile Raynaud

International Journal of Molecular Sciences, 2019, 20 (19), pp.4814. ⟨10.3390/ijms20194814⟩

Article dans une revue (article de synthèse) hal-02351941v1
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The Plant DNA Damage Response: Signaling Pathways Leading to Growth Inhibition and Putative Role in Response to Stress Conditions

Maher-Un Nisa , Ying Huang , Moussa Benhamed , Cécile Raynaud

Frontiers in Plant Science, 2019, 10, pp.653. ⟨10.3389/fpls.2019.00653⟩

Article dans une revue hal-02351967v1

DNA-Damaging Effectors: New Players in the Effector Arena

Laurent Camborde , Cécile Raynaud , Bernard Dumas , Elodie Gaulin

Trends in Plant Science, 2019, 24 (12), pp.1094-1101. ⟨10.1016/j.tplants.2019.09.012⟩

Article dans une revue hal-02623496v1
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The YTH Domain Protein ECT2 Is an m 6 A Reader Required for Normal Trichome Branching in Arabidopsis

Jérémy Scutenaire , Jean-Marc Deragon , Viviane Jean , Moussa Benhamed , Cécile Raynaud et al.

The Plant cell, 2018, 30 (5), pp.986-1005. ⟨10.1105/tpc.17.00854⟩

Article dans une revue hal-02100408v1

Role of pyrimidine salvage pathway in the maintenance of organellar and nuclear genome integrity

José-Antonio Pedroza-García , Manuela Nájera-Martínez , Christelle Mazubert , Paulina Aguilera-Alvarado , Jeannine Drouin-Wahbi et al.

The Plant Journal, 2018, 97 (3), pp.430-446. ⟨10.1111/tpj.14128⟩

Article dans une revue hal-02076341v1
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Modify the histone to win the battle: chromatin dynamics in plant-pathogen interactions

Juan Sebastien Ramirez Prado , Sophie Piquerez , Abdelhafid Bendahmane , Heribert Hirt , Cécile Raynaud et al.

Frontiers in Plant Science, 2018, 9, pp.355. ⟨10.3389/fpls.2018.00355⟩

Article dans une revue hal-02628892v1

At-MINI ZINC FINGER2 and Sl-INHIBITOR OF MERISTEM ACTIVITY, a Conserved Missing Link in the Regulation of Floral Meristem Termination in Arabidopsis and Tomato.

Norbert Bollier , Adrien Sicard , Julie Leblond , David Latrasse , Nathalie Gonzalez et al.

The Plant cell, 2018, 30 (1), pp.83-100. ⟨10.1105/tpc.17.00653⟩

Article dans une revue hal-02625003v1
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The quest for epigenetic regulation underlying unisexual flower development in Cucumis melo

David Latrasse , Natalia Rodriguez Granados , Alaguraj Veluchamy , Kiruthiga Gayathri Mariappan , Claudia Bevilacqua et al.

Epigenetics and Chromatin, 2017, 10 (22), pp.1-17. ⟨10.1186/s13072-017-0132-6⟩

Article dans une revue hal-01594682v1
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MAPK-triggered chromatin reprogramming by histone deacetylase in plant innate immunity

David Latrasse , Teddy Jegu , Huchen Li , Axel de Julien de Zelicourt , Cécile Raynaud et al.

Genome Biology, 2017, 18, pp.131. ⟨10.1186/s13059-017-1261-8⟩

Article dans une revue hal-02627216v1
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The <em>Arabidopsis</em> SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility

Teddy Jegu , Alaguraj Veluchamy , Juan Sebastien Ramirez Prado , Charley Rizzi Paillet , Magali Perez et al.

Genome Biology, 2017, 18, pp.114. ⟨10.1186/s13059-017-1246-7⟩

Article dans une revue hal-02627578v1

Function of the plant DNA polymerase epsilon in replicative stress sensing, a genetic analysis

José- Antonio Pedroza Garcia , Christelle Mazubert , Ivan del Olmo , Mickael Bourge , Séverine Domenichini Rousselet et al.

Plant Physiology, 2017, 173 (3), pp.1735-1749. ⟨10.1104/pp.17.00031⟩

Article dans une revue hal-01608067v1
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Arabidopsis DNA polymerase epsilon recruits components of Polycomb repressor complex to mediate epigenetic gene silencing

Ivan del Olmo , Juan A. Lopez , Jesus Vazquez , Cécile Raynaud , Manuel Pineiro et al.

Nucleic Acids Research, 2016, 44 (12), pp.5597-5614. ⟨10.1093/nar/gkw156⟩

Article dans une revue hal-02631374v1
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LHP1 regulates H3K27me3 spreading and shapes the three-dimensional conformation of the arabidopsis genome

Alaguraj Veluchamy , Teddy Jegu , Federico Damian Ariel , David Latrasse , Kiruthiga Gayathri Mariappan et al.

PLoS ONE, 2016, 11 (7), pp.1-25. ⟨10.1371/journal.pone.0158936⟩

Article dans une revue hal-01602849v1
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Role of the Polymerase ϵ sub-unit DPB2 in DNA replication, cell cycle regulation and DNA damage response in Arabidopsis

José Antonio Pedroza-Garcia , Séverine Domenichini , Christelle C. Mazubert , Mickaël Bourge , Charles I. White et al.

Nucleic Acids Research, 2016, 44 (15), pp.7251-7266. ⟨10.1093/nar/gkw449⟩

Article dans une revue inserm-01904881v1

Chloroplast Activity and 3'phosphadenosine 5'phosphate Signaling Regulate Programmed Cell Death in Arabidopsis.

Quentin Bruggeman , Christelle Mazubert , Florence Prunier , Raphaël Lugan , Kai Xun Chan et al.

Plant Physiology, 2016, pp.1745-56. ⟨10.1104/pp.15.01872⟩

Article dans une revue hal-01461818v1

Chloroplasts around the plant cell cycle

Jose Antonio Pedroza Garcia , Séverine Domenichini Rousselet , Catherine Bergounioux , Moussa Benhamed , Cécile Raynaud

Current Opinion in Plant Biology, 2016, 34, pp.107-113. ⟨10.1016/j.pbi.2016.10.009⟩

Article dans une revue istex hal-01602008v1

Plant programmed cell death from a chromatin point of view

David Latrasse , Moussa Benhamed , Catherine Bergounioux , Cécile Raynaud , Marianne Delarue

Journal of Experimental Botany, 2016, 67 (20), pp.5887-5900. ⟨10.1093/jxb/erw329⟩

Article dans une revue hal-01602493v1

Chromatin architecture: A new dimension in the dynamic control of gene expression

Juan Sebastian Ramirez-Prado , Natalia Rodriguez Granados , Federico Ariel , Cécile Raynaud , Moussa Benhamed

Plant Signaling and Behavior, 2016, 11 (10), pp.e1232224. ⟨10.1080/15592324.2016.1232224⟩

Article dans une revue hal-01605717v1

Put your 3D glasses on: plant chromatin is on show

Natalia Y. Rodriguez-Granados , Juan S. Ramirez-Prado , Alaguraj Veluchamy , David Latrasse , Cécile Raynaud et al.

Journal of Experimental Botany, 2016, 67 (11), pp.3205-3221. ⟨10.1093/jxb/erw168⟩

Article dans une revue hal-02636519v1
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Involvement of Inositol Biosynthesis and Nitric Oxide in the Mediation of UV-B Induced Oxidative Stress

Dmytro I. Lytvyn , Cécile Raynaud , Alla I. Yemets , Catherine Bergounioux , Yaroslav B. Blume

Frontiers in Plant Science, 2016, 7, pp.1-12. ⟨10.3389/fpls.2016.00430⟩

Article dans une revue hal-02634791v1
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A SWI/SNF Chromatin Remodelling Protein Controls Cytokinin Production through the Regulation of Chromatin Architecture

Teddy Jegu , Séverine Domenichini , Thomas Blein , Federico Ariel , Aurélie Christ et al.

PLoS ONE, 2015, 10 (10), pp.e0138276. ⟨10.1371/journal.pone.0138276⟩

Article dans une revue hal-02379647v1

Involvement of Arabidopsis hexokinase1 in cell death mediated by myo-inositol accumulation

Quentin Bruggeman , Florence Prunier , Christelle Mazubert , Linda de Bont , Marie Garmier et al.

The Plant cell, 2015, 27 (6), pp.1801-1814. ⟨10.1105/tpc.15.00068⟩

Article dans une revue hal-02630753v1

<em>Arabidopsis</em> MCM2 is responsible for reduction in cell division induced by loss of function of the alpha subunit of GTP-binding protein

Su-Fen Chen , Dong-Mei Yin , Ke Liang , Cécile Raynaud , Di-An Ni

Acta Physiologiae Plantarum, 2015, 37, pp.241. ⟨10.1007/s11738-015-1976-7⟩

Article dans une revue hal-02630608v1

The BAF60 Subunit of the SWI/SNF Chromatin-Remodeling Complex Directly Controls the Formation of a Gene Loop at FLOWERING LOCUS C in Arabidopsis

Teddy Jégu , David Latrasse , Marianne Delarue , Heribert Hirt , Séverine Domenichini et al.

The Plant cell, 2014, 26 (2), pp.538-551. ⟨10.1105/tpc.113.114454⟩

Article dans une revue hal-02636131v1

The polyadenylation factor subunit CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR30: a key factor of programmed cell death and a regulator of immunity in Arabidopsis

Quentin Bruggeman , Marie Garmier , Linda de Bont , Ludivine L. Soubigou-Taconnat , Christelle Mazubert et al.

Plant Physiology, 2014, 165 (2), pp.732-746. ⟨10.1104/pp.114.236083⟩

Article dans une revue hal-02632347v1
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Dual function of MIPS1 as a metabolic enzyme and transcriptional regulator.

David Latrasse , Teddy Jégu , Pin-Hong Meng , Christelle Mazubert , Elodie Hudik et al.

Nucleic Acids Research, 2013, 41 (5), pp.2907-17. ⟨10.1093/nar/gks1458⟩

Article dans une revue hal-00856166v1

Multiple functions of Kip-related protein5 connect endoreduplication and cell elongation.

Teddy Jégu , David Latrasse , Marianne Delarue , Christelle Mazubert , Mickaël Bourge et al.

Plant Physiology, 2013, 161 (4), pp.1694-705. ⟨10.1104/pp.112.212357⟩

Article dans une revue hal-00855559v1

The Nucleus-Encoded trans -Acting Factor MCA1 Plays a Critical Role in the Regulation of Cytochrome f Synthesis in Chlamydomonas Chloroplasts

Alix Boulouis , Cécile Raynaud , Sandrine Bujaldon , Aude Aznar , Francis-André Wollman et al.

The Plant cell, 2012, 23 (1), pp.333-349. ⟨10.1105/tpc.110.078170⟩

Article dans une revue hal-02323630v1

Evidence for a role of Arabidopsis CDT1 proteins in gametophyte development and maintenance of genome integrity.

Séverine Domenichini , Moussa Benhamed , Geert de Jaeger , Eveline van de Slijke , Sophie Blanchet et al.

The Plant cell, 2012, 24 (7), pp.2779-91. ⟨10.1105/tpc.112.100156⟩

Article dans une revue hal-00855562v1

Molecular Characterization of the Glycerol-Oxidative Pathway of Clostridium butyricum VPI 1718

Cécile Raynaud , Jieun Lee , Patricia Sarcabal , Christian Croux , Isabelle Meynial-Salles et al.

Journal of Bacteriology, 2011, 193 (12), pp.3127 - 3134. ⟨10.1128/JB.00112-11⟩

Article dans une revue hal-02644139v1

Crosstalks between Myo-Inositol Metabolism, Programmed Cell Death and Basal Immunity in Arabidopsis

Ping Hong Meng , Cécile Raynaud , Guillaume Tcherkez , Sophie Blanchet , Kamal Massoud et al.

PLoS ONE, 2009, 4 (10), pp.e7364. ⟨10.1371/journal.pone.0007364⟩

Article dans une revue hal-05285707v1

Two cell-cycle regulated SET-domain proteins interact with proliferating cell nuclear antigen (PCNA) in Arabidopsis.

Cécile Raynaud , Rosangela Sozzani , Nathalie Glab , Séverine Domenichini , Claudette Perennes et al.

The Plant Journal, 2006, 47 (3), pp.395-407. ⟨10.1111/j.1365-313X.2006.02799.x⟩

Article dans une revue hal-00118565v1

Cell and plastid division are coordinated through the prereplication factor AtCDT1.

Cécile Raynaud , Claudette Perennes , Christophe Reuzeau , Olivier Catrice , Spencer Brown et al.

Proceedings of the National Academy of Sciences of the United States of America, 2005, 102, pp.8216-8221. ⟨10.1073/pnas.0502564102⟩

Article dans une revue hal-00019909v1

NtKIS2, a novel tobacco cyclin-dependent kinase inhibitor is differentially expressed during the cell cycle and plant development

Sophie Jasinski , Cynthia Saraiva Leite , Séverine Domenichini , Rebecca Stevens , Cécile Raynaud et al.

Plant Physiology and Biochemistry, 2003, 41 (6-7), pp.667-676. ⟨10.1016/S0981-9428(03)00082-2⟩

Article dans une revue istex hal-02924897v1

Biologie intégrative des organismes photosynthétiques et micro-organismes associés

Cécile Raynaud , Laurent Nussaume , Fabrice Besnard , Ugo Cenci , Daniel Clesse et al.

CNRS - Biologie intégrative des organismes photosynthétiques et micro-organismes associés (Section 23). 2025, pp.381-389

Rapport (rapport d’expertise collective) hal-05492655v1