Christian Fournier
Publications
Publications
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The grapevine single-berry clock, practical tools and outcomesOpen GPB 2024 - Open Conference on Grapevine Physiology and Biotechnology, Jul 2024, Logrono La Riora, Spain. ⟨10.58233/aleZezo4⟩ |
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An automatic phenotyping pipeline to track maize organs over time7. International Plant Phenotyping Symposium (IPPS 2022), IPPN; WUR; NPEC, Sep 2022, Wageningen, Netherlands. pp.47 |
Assessing the role of ageing and light availability in leaf mortality in the mango tree30. International Horticultural Congress IHC2018: International Symposium on Cultivars, Rootstocks and Management Systems of Deciduous Fruit and Fruit Tree Behaviour in Dynamic Environments, International Society for Horticultural Science, Aug 2018, Istanbul, Turkey. pp.601-608, ⟨10.17660/ActaHortic.2020.1281.79⟩ |
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What structural plant modelling and image-based phenotyping can learn from each other?FSPM 2020 - 9th International Conference on Functional-Structural Plant Models, Hochschule Geisenheim University; University of Hannover, Oct 2020, Online, Germany. pp.55-56 |
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A 3D architectural model of grass shoot morphogenesis and plasticity, driven by organ metabolite concentrations and coordination rulesFSPM 2020 - 9th International Conference on Functional-Structural Plant Models, Hochschule Geisenheim University; University of Hannover, Oct 2020, Online, Germany |
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Modelling wheat shoot morphogenesis at plant scale from organ-level metabolitesSociety of Experimental Biology Annual Main Meeting (SEB 2019), Society of Experimental Biology (SEB). GBR., Jul 2019, Seville, Spain |
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Towards a model of wheat leaf morphogenesis at plant scale driven by organ-level metabolites6. International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications (PMA2018), Nov 2018, Hefei, China. 151 p., ⟨10.1109/PMA.2018.8611578⟩ |
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Toward the inter-comparison of radiation transfert model for plant modelling applicationFSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, FSPMA 2016., Nov 2016, Qingdao, China |
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Simulation of the effects of leaf bending dynamics on fungicide deposit on individual leaves of wheat using a 3D architectural modelFSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, FSPMA 2016., 2016, Qingdao, China |
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HydroShoot: a new FSPM model for simulating hydraulic structure and gas-exchange dynamics of complex plants canopies under water deficitIEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, Qingdao, China. 60 p |
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Modeling and simulating the distribution of fungicide among leaves in wheatFSPMA2016 - International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, FSPMA 2016., Nov 2016, Qingdao, China |
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Image workflows for high throughput phenotyping platformsBMVA technical meeting: Plants in Computer Vision, Nov 2016, London, United Kingdom |
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ECHAP : un projet pour identifier les possibilités de réduction de l’utilisation des fongicides en utilisant l’architecture des couverts45. Congrès du Groupe Français des Pesticides "Devenir et impact des pesticides : verrous à lever et nouveaux enjeux, May 2015, Versailles, France. 2 p |
Genetic variability in light-related parameters of maize models revealed by linking 3D-reconstruction of plant architecture with light model and phenotyping platform2016 IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, Qingdao, China |
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A functional structural model of wheat leaf metabolism during extensionFSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, FSPMA 2016., Nov 2016, Qingdao, China |
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HydroShoot: a new FSPM model for simulating hydraulic structure and gas-exchange dynamics of complex plants canopies under water deficit2016 IEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, Qingdao, China |
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OpenAlea: Scientific Workflows Combining Data Analysis and SimulationSSDBM: Scientific and Statistical Database Management, Jun 2015, San Diego, United States. ⟨10.1145/2791347.2791365⟩ |
Parameterizing patterns in wheat architecture to simulate the 3D dynamics of wheat cropsIWIW2015: International Wheat Innovation Workshop, Wheat Initiative - International Research Initiative for Wheat Improvement. INT., Nov 2015, Clermont-Ferrand, France. 1 p |
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An integrated and modular model for simulating and evaluating how canopy architecture can help reduce fungicide applications7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.345-348 |
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OpenAlea 2.0: Architecture of an integrated modeling environment on the web7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.213 |
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Re-parametrisation of Adel-wheat allows reducing the experimental effort to simulate the 3D development of winter wheat7. International Conference on Functional Structure Plant Models, Jun 2013, Saariselkä, Finland |
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A generic model of interactions between FSPM, foliar pathogens and microclimate7th International Conference on Functional-Structural Plant Models, Jun 2013, Saariselkä, Finland. pp.339-341 |
Des outils pour simuler l'influence de l'architecture des plantes sur les épidémies : modèle Blé SeptorioseSéminaire RMT Modélisation "Architecture du couvert végétal : Un levier pour limiter le développement des épidémies ?", Nov 2012, Paris, France. 17 diapos powerpoint |
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A Plastic, Dynamic and Reducible 3D Geometric Model for Simulating Gramineous LeavesInternational Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Oct 2012, Shanghai, China. pp.125-132 |
Extracting reproducible information from a phenotyping platform requires model-assisted dissection of the phenotypeChina - EU Workshop on Phenotypic Profiling and Technology Transfer on Crop Breeding, Sep 2012, Barcelone, Spain |
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Design steps of a generic model to simulate air borne diseases as a function of crop architecture projectECA International Conference on "Plant and Canopy Architecture Impact on Disease Epidemiology and Pest Development", Jul 2012, Rennes, France |
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Building modular FSPM under OpenAlea: concepts and applications6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.109-112 |
Assessing the effect of canopy architecture as affected by sowing density on epidemics using a virtual wheat plant model coupled with a Septoria tritici epidemic model6th International Workshop on Functional-Structural Plant Models, 2010, Davis, United States. pp.58-60 |
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Assessing the effect of canopy architecture as affected by sowing density on epidemics using a virtual wheat plant model coupled with a Septoria tritici epidemic model6. International Workshop, Sep 2010, Davis, United States |
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Using a functional-structural plant model to identify important infection-cycle steps for epidemics6. International Workshop, Sep 2010, Davis, United States |
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Feedbacks between plant microclimate and morphogenesis in fluctuating environment: analysis for rice using Ecomeristem model coupled with 3D plant and energy balance computation tools in OpenAlea platform.6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.123-125 |
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Towards a quantitative evaluation of cereal lamina shape using an empirical shape modelPMA 2009 3rd International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Saisissez le nom du laboratoire, du service ou du département., Ville service., Nov 2009, Beijing, China. 454 p |
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Combining multiple modeling approaches to design plant ideotypes for specific climatesInternational Workshop on Mathematical Modeling of Plant Development, Mathematical Biosciences Institutes (MBI). USA., Sep 2010, Columbus, United States |
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Light-nitrogen relationships within plant canopies analysed using in silico reconstruction of wheat crops6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.80-82 |
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Does the complexity of a plant-pathogen model influence the identification of infection-cycle steps that are decisive for epidemics?11. ESA Congress, Aug 2010, Montpellier, France |
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Plasticity of wheat architecture in response to sowing date and plant population density described with the 3D plant model ADEL wheat11. ESA Congress, Aug 2010, Montpellier, France |
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Towards a quantitative evaluation of cereal lamina shape using an empirical shape modelPMA 2009 3rd International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications, Saisissez le nom du laboratoire, du service ou du département., Ville service., Nov 2009, Beijing, China. 454 p |
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Light-nitrogen relationships within plant canopies analysed using in silico reconstruction of wheat crops6. International Workshop, Sep 2010, Davis, United States |
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High throughput phenotyping and plant modelling : two legs for combined physiological and genetic approachesEPSO workshop on plant phenotyping, The European Plant Science Organisation (EPSO). BEL., Nov 2009, Jülich, Germany |
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Plant modelling with Python components in OpenAleaEuroSciPy 2009, 2009, Leipzig, Germany |
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A functional-structural model of nitrogen distribution within the wheat culm during grain fillingAnnual Meeting of the Society-for-Experimental-Biology, Jun 2009, Glasgow, United Kingdom |
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Sharing efforts for modelling plant systems: from publications to reusable software componentsComparative Biochemistry and Physiology - Part A: Molecular& Integrative Physiology, 2009, Glasgow, United Kingdom. pp.S222, ⟨10.1016/j.cbpa.2009.04.549⟩ |
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Modélisation des interactions épidémie - couvert végétal : De la recherche à la mise au point d'outils opérationnels pour la protection intégrée des cultures9. Conférence Internationale, Dec 2009, Tours, France |
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Date de semis, pression de septoriose et potentiel de rendement: De la compréhension à la préconisation opérationnelle9. Conférence Internationale, Dec 2009, Tours, France |
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Septo3D: un modèle pour analyser les effets de la structure des couverts de blé sur les épidémies de septoriose9. Conférence internationale, Dec 2009, Tours, France |
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Modelling the genetic variability of growth under water deficit and its impact on grain yield21. EUCARPIA, Maize and Sorghum breeding in the genomics era, Jun 2009, Bergame, Italy |
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Vers un rosier virtuel en 3D pour intégrer les interactions plante-environnementPlantes et Peuplements Virtuels (PLANTVIRT 2008), Mar 2008, Lyon, France |
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Relative contributions of light interception and radiation use efficiency to the reduction of maize productivity under cold temperatures5. International Workshop on Functional-Structural Plant Models, Nov 2007, Napier, New Zealand. ⟨10.1071/FP08061⟩ |
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Coupling a 3D virtual wheat (<em>Triticum aestivum</em>) plant model with a <em>Septoria tritici</em> epidemic model (Septo3D): a new approach to investigate plant-pathogen interactions linked to canopy architecture5. International Workshop on Functional-Structural Plant Models, Nov 2007, Napier, New Zealand. ⟨10.1071/FP08066⟩ |
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OpenAlea: a visual programming and component-based software platform for plant modelling5th International Workshop on Functional Structural Plant Models, Nov 2007, Napier, New Zealand. pp.751-760, ⟨10.1071/fp08084⟩ |
A process-based model to simulate nitrogen distribution in wheat (Triticum aestivum) during grain-filling5. International Workshop on Functional-Structural Plant Models, Nov 2007, Napier, New Zealand. ⟨10.1071/FP08064⟩ |
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A model of nitrogen distribution and senescence in virtual wheat5.International Workshop, Nov 2007, Napier, New Zealand |
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Modelling the architectural growth and development of rosebush using L-Systemsgrowth phenotyping and imagint in plants, Jul 2007, Montpellier, France |
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Coupling 3D virtual plant and foliar epidemic models: a new modelling approach to investigate plant-pathogen interactions linked to architecture5. International Workshop, Nov 2007, Napier, New Zealand |
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Simulating the red:far-red ratio of individual plant organs, a key issue for hytochrome-driven processes5.International Workshop, Nov 2007, Napier, New Zealand |
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Growth kinetics and architectural development of the rose bush according to thermal timegrowth phenotyping and imagint in plants, Jul 2007, Montpellier, France |
Scaling up to whole-plant and crop levels short-term responses of leaf growth to water deficit5. international workshop on functional-structural plant models, Nov 2007, Napier, New Zealand |
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Dissecting maize matter production variability using a structural model. An original approach to drive maize breeding for cold tolerance5. International Workshop on Functional-Structural Plant Models, HortResearch Mt Albert. Auckland, NZL., Nov 2007, Napier, New Zealand |
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OpenAlea: An open-source platform for the integration of heterogeneous FSPM componentsFSPM07 - 5th International Workshop on Functional-Structural Plant Models, Nov 2007, Napier, New Zealand. pp.P36:1-2 |
A simple model simulating the construction of blade and sheath length in maize5. International Workshop, Nov 2007, Napier, New Zealand |
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Towards an architectural approach to direct maize breeding for cold tolerance2. International Symposium on Plant Growth Modelling, 2006, Beijing, China |
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OpenAlea : a platform for plant modelling, analysis and simulationPython Conference Europython, 2006, Genève, Switzerland. 16 p |
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VIRTUAL PLANT MODELS FOR STUDYING INTERACTIONS BETWEEN CROPS AND ENVIRONMENTSimulation in industry, ESS'2001, Oct 2001, Marseille, France |
Analyse des échanges radiatifs au sein d'un couvert végétal par lancer de rayons stochastique: réflectance bidirectionnelle et micro-climat lumineux dans le couvert7. International Symposium, Apr 1997, Courchevel, France |
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DeepCollar: a precise and reliable high throughput, method for phenotyping maize stem elongation, collar appearance, leaf azimuth and individual collar height from temporal series of multi-view imagesEuropean Plant Phenomics Symposium (EPPS), Sep 2025, Bonn, Germany |
GrapeInSilico: a modelling framework for building grapevine FSPMsFSPM 2023 - 10. International Conference on Functional-Structural Plant Models, Mar 2023, Berlin, Germany |
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Using crop-pathogen modeling to identify plant traits to control Zymoseptoria tritici epidemics on wheatEUCARPIA Cereal section Meeting "Breeeding cereals for sustainable agriculture, Mar 2018, Clermont-Ferrand, France. , 2018 |
Assessment of the role of ageing and light availability in leaf mortality in mango treeThe 30th International Horticultural Congress, Aug 2018, Istanbul, Turkey. International Society for Horticultural Science (ISHS), 2018, IHC2018 |
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Estimating canopy characteristics from ground-based LiDAR measurement assisted with 3D Adel-Wheat modelFSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, Nov 2016, Qingdao, China. 2016 |
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Toward the inter-comparison of radiation transfert model for plant modelling applicationIEEE International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications (FSPMA 2016), Nov 2016, QingDao, China. |
Using combined virtual plant - pathogen models to compare the influence of wheat architecture on epidemics of two contrasted foliar fungiFSPMA2016, International Conference on Functional-Structural Plant Growth Modeling, Simulation, Visualization and Applications, IEEE, Nov 2016, Qingdao, China. FSPMA 2016, 2016 |
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PHENOARCH, a multiscale phenotyping platform for plant architecture, growth rate, water use efficiency and radiation use efficiencyRecent progress in drought tolerance from genetics to modelling, Jun 2015, Montpellier, France. 2015 |
PHENOARCH, a multiscale phenotyping platform for plant architecture, growth rate, water use efficiency and radiation use efficiencyEPPN Plant Phenotyping Symposium, Nov 2015, Barcelona, Spain. 2015 |
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ECHAP : un projet pour identifier les possibilités de réduction de l’utilisation des fongicides en utilisant l’architecture des couverts45. Congrès du Groupe Français des Pesticides "Devenir et impact des pesticides : verrous à lever et nouveaux enjeux, May 2015, Versailles, France. 145 p., 2015, Devenir et impact des pesticides : verrous à lever et nouveaux enjeux |
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Phenomenal: a software framework for model-assisted analysis of high throughput plant phenotyping dataIAMPS 2015 (International Workshop on Image Analysis Methods for the Plant Sciences), Sep 2015, Louvain-la-Neuve, Belgium. |
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High throughput estimation of incident light, light interception and radiation-use efficiency of thousands of plants in a phenotyping platformEPPN Plant Phenotyping Symposium, Nov 2015, Barcelona, Spain. 2015 |
OpenAlea 2.0: Architecture of an integrated modeling environment on the web7. International Conference on Functional Structure Plant Models, Jun 2013, Saariselkä, Finland. Finnish Society of Forest Science, 2013 |
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Genetic variation of radiation-use efficiency and water use efficiency under water deficit in a high-throughput phenotyping platformInterdrought IV Conference, Sep 2013, Perth, Australia. 2013 |
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A generic model of interactions between FSPM, foliar pathogens, and microclimate7. International Conference on Functional Structure Plant Models, Jun 2013, Saariselkä, Finland. Finnish Society of Forest Science, 2013 |
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Simulating maize plasticity in leaf appearance and size using regulation rules7. International Conference on Functional Structure Plant Models, Jun 2013, Saariselkä, Finland. Finnish Society of Forest Science, 2013 |
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How do variations of architectural parameters affect light partitioning within wheat - pea mixtures? A simulation study based on a virtual plant approach7. International Conference on Functional Structure Plant Models, Jun 2013, Saariselkä, Finland. Finnish Society of Forest Science, 7. International Conference on Functional Structure Plant Models, 2013 |
The ECHAP project: Reducing fungicide use by associating optimal treatment strategies and canopies promoting disease escapePlant and Canopy Architecture Impact on Disease Epidemiology and Pest Development, Jul 2012, Rennes, France. , 2012 |
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Does canopy architecture play a role in the effect of plant density and sowing date on epidemics of Septoria tritici in wheat crops?Annual Main Meeting of the Society of Experimental Biology, Jun 2009, Glasgow, United Kingdom. , 2009 |
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Modelling the time course of senescence in winter wheat at the individual leaf and whole plant level5. International Workshop, Nov 2007, Napier, France. 2007, Functional-Structural Plant Models. Abstracts of papers and posters |
Modelling Nitrogen Distribution in Virtual Plants, as Exemplified by Wheat Culm During Grain FillingThird International Symposium on Plant Growth Modeling, Simulation, Visualization and Applications: proceedings, 9-13 November 2009, Beijing, China, IEEE Computer Society, 2009, 978-0-7695-3988-1. ⟨10.1109/PMA.2009.67⟩ |
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Functional-structural modelling of GramineaeFunctional-Structural Plant Modelling in Crop Production, Springer, 2007, 978-1-4020-6033-5 |
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An architectural approach to investigate maize response to low temperatureScale and complexity in plant systems research: Gene-plant-crop relations, Springer, 2007, 978-1-4020-5904-9 |
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Functional-structural plant models in crop production: where are we and where to go?Functional-Structural Plant Modelling in Crop Production, Springer, 2007, 978-1-4020-6032-8 |
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ADEL-Wheat: a 3D Architectural Model of wheat developmentHu, B.-G. and Jaeger, M. Plant Growth Modeling and Applications, Springer Verlag, pp.54-63, 2003 |
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Developing a generic DSS model metadata catalogue and APIs for crop protection2025 |
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Ripening dynamics revisited: an automated method to track the development of asynchronous berries on time-lapse images2023 |
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PhenoTrack3D: an automatic high-throughput phenotyping pipeline to track maize organs over time2025 |
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Phenomenal: An automatic open source library for 3D shoot architecture reconstruction and analysis for image-based plant phenotyping2019 |
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ECHAP « L’architecture des couverts végétaux : un levier pour réduire l’utilisation des fongicides ? »[Rapport de recherche] 1879/10, INRA. 2015, pp.43 |
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Modélisation des interactions entre plantes au sein des peuplements. Application à la simulation des régulations de la morphogenèse aérienne du maïs (Zea mays L.) par la compétition pour la lumière.Ecologie, Environnement. Institut national agronomique paris-grignon - INA P-G, 2000. Français. ⟨NNT : ⟩ |
OpenAlea2019 |
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Caribu (CAnopy RadIative BUdget)Logiciel hal-04945340v1 |