CHRISTOPHE BOURY

48
Documents

Publications

Publications

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Sequencing, de novo assembly of Ludwigia plastomes, and comparative analysis within the Onagraceae family

F Barloy-Hubler , A.-L Le Gac , Christophe C. Boury , Erwan Guichoux , D Barloy
Peer Community In Genomics, 2025, e43, ⟨10.24072/pci.genomics.100334⟩
Article dans une revue hal-05068858 v2
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A Strategy for Studying Epigenetic Diversity in Natural Populations: Proof of Concept in Poplar and Oak

Isabelle Lesur Kupin , Odile Rogier , Mamadou Dia Sow , Christophe Boury , Alexandre Duplan et al.
Journal of Experimental Botany, 2024, 75 (18), pp.5568-5584. ⟨10.1093/jxb/erae266⟩
Article dans une revue hal-04621404 v1

Dataset describing the effects of housing environment, dominance status and parity on the PBMC transcriptome of sows during gestation and lactation

Mariana Mescouto Lopes , Annie Vincent , Francoise Thomas , Caroline Clouard , Raphaël Comte et al.
Animal - Open Space, 2024, 3, pp.100078. ⟨10.1016/j.anopes.2024.100078⟩
Article dans une revue (data paper) hal-04693509 v1
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Comparative genomics of Mycoplasma feriruminatoris, a fast-growing pathogen of wild Caprinae

Vincent Baby , Chloé Ambroset , Patrice Gaurivaud , Laurent Falquet , Christophe Boury et al.
Microbial Genomics, 2023, 9 (10), ⟨10.1099/mgen.0.001112⟩
Article dans une revue hal-04323203 v1
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Fruit fly phylogeny imprints bacterial gut microbiota

Virginie Ravigné , Nathalie Becker , François Massol , Erwan Guichoux , Christophe Boury et al.
Evolutionary Applications, 2022, 15 (10), pp.1621-1638. ⟨10.1111/eva.13352⟩
Article dans une revue hal-03640460 v1

Evidence of local adaptation despite strong drift in a Neotropical patchily distributed bromeliad

Bárbara Simões Santos Leal , Cleber Juliano Neves Chaves , Vanessa Araujo Graciano , Christophe Boury , Luis Alberto Pillaca Huacre et al.
Heredity, In press, pp.1-15. ⟨10.1038/s41437-021-00442-9⟩
Article dans une revue hal-03227188 v1
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Coupling ecological network analysis with high-throughput sequencing-based surveys: Lessons from the next-generation biomonitoring project

Maxime Dubart , Pascal Alonso , Didac Barroso-Bergadà , N. Becker , Kévin Béthune et al.
Advances in Ecological Research, 2021, Advances in Ecological Research, 65, pp.367-430. ⟨10.1016/bs.aecr.2021.10.007⟩
Article dans une revue (article de synthèse) hal-03634351 v1
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Fast sequence-based microsatellite genotyping development workflow

Olivier Lepais , Emilie Chancerel , Christophe Boury , Franck Salin , Aurélie Manicki et al.
PeerJ, 2020, 8, pp.1-28. ⟨10.7717/peerj.9085⟩
Article dans une revue hal-02936408 v1
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Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand

Isabelle Lesur Kupin , Hermine Alexandre , Christophe Boury , Emilie Chancerel , Christophe Plomion et al.
Frontiers in Plant Science, 2018, 9, pp.1-16. ⟨10.3389/fpls.2018.00996⟩
Article dans une revue hal-02628743 v1
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High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster)

Christophe Plomion , Jérôme Bartholomé , Isabelle Lesur Kupin Lesur , Christophe C. Boury , Isabel Rodríguez-Quilón et al.
Molecular Ecology Resources, 2016, 16 (2), pp.574-587. ⟨10.1111/1755-0998.12464⟩
Article dans une revue istex hal-02640393 v2
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Performance of genomic prediction within and across generations in maritime pine

Jérôme Bartholomé , Joost van Heerwaarden , Fikret Isik , Christophe C. Boury , Marjorie Vidal et al.
BMC Genomics, 2016, 17 (1), 14 p. ⟨10.1186/s12864-016-2879-8⟩
Article dans une revue hal-02636107 v1
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Linkage and association mapping for two major traits used in the maritime pine breeding program: height growth and stem straightness.

Jérôme Bartholome , Marco Cam Bink , Joost van Heerwaarden , Emilie Chancerel , Christophe Boury et al.
PLoS ONE, 2016, 11 (11), 21 p. ⟨10.1371/journal.pone.0165323⟩
Article dans une revue hal-02636715 v1

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Christophe Plomion , Jean-Marc Aury , Joëlle Amselem , Tina Alaeitabar , Valérie Barbe et al.
Molecular Ecology Resources, 2015, 16 (1), pp.254-265. ⟨10.1111/1755-0998.12425⟩
Article dans une revue istex hal-01579667 v1
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Paternity recovery in two maritime pine polycross mating designs and consequences for breeding

Marjorie Vidal , Christophe Plomion , Luc Harvengt , Annie A. Raffin , Christophe C. Boury et al.
Tree Genetics and Genomes, 2015, 11 (5), 13 p. ⟨10.1007/s11295-015-0932-4⟩
Article dans une revue hal-02634494 v1

Nucleotide polymorphisms in a pine ortholog of the Arabidopsis degrading enzyme cellulase KORRIGAN are associated with early growth performance in Pinus pinaster

José Antonio Cabezas , Santiago C. González-Martínez , Carmen Collada , María Angeles Guevara , Christophe C. Boury et al.
Tree Physiology, 2015, 35 (9), pp.1000-1006. ⟨10.1093/treephys/tpv050⟩
Article dans une revue hal-02640523 v1

Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks

Camille Lepoittevin , Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Laure Villate , Tiange Lang et al.
Molecular Ecology Resources, 2015, 15 (6), pp.1446-1459. ⟨10.1111/1755-0998.12407⟩
Article dans une revue istex hal-02635881 v1

Imprints of natural selection along environmental gradients in phenology-related genes of Quercus petraea

Florian Alberto , Jérémy Derory , Christophe C. Boury , Jean-Marc Frigerio , Niklaus E. Zimmermann et al.
Genetics, 2013, 195 (2), pp.495-512. ⟨10.1534/genetics.113.153783⟩
Article dans une revue hal-02649035 v1

Outlier loci highlight the direction of introgression in oaks

Erwan Guichoux , Pauline Garnier‐géré , Lelia L. Lagache , Tiange Lang , Christophe C. Boury et al.
Molecular Ecology, 2013, 22 (2), pp.450-62. ⟨10.1111/mec.12125⟩
Article dans une revue istex hal-02646008 v1
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High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination

Emilie E. Chancerel , Jean-Baptiste J.-B. Lamy , Isabelle Lesur Kupin Lesur , Celine C. Noirot , Christophe Klopp et al.
BMC Biology, 2013, 11, 19 p. ⟨10.1186/1741-7007-11-50⟩
Article dans une revue hal-00964786 v1
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Comparative mapping in the Fagaceae and beyond with EST-SSRs

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Oliver O. Gailing , Giovanni G. G. G. Vendramin , Francesca F. Bagnoli et al.
BMC Plant Biology, 2012, 12 (153), 40 p. ⟨10.1186/1471-2229-12-153⟩
Article dans une revue hal-00964224 v1
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Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Emilie E. Chancerel , Camille Lepoittevin , Grégoire G. Le Provost , Yao-Cheng Lin , Juan Pablo Jaramillo-Correa et al.
BMC Genomics, 2011, 12, 14 p. ⟨10.1186/1471-2164-12-368⟩
Article dans une revue hal-02649406 v1

Genetic dissection of sex determinism, inflorescence morphology and downy mildew resistance in grapevine

Elisa E. Marguerit , Christophe C. Boury , Aurélie Manicki , Martine Donnart , Gisele Butterlin et al.
TAG Theoretical and Applied Genetics, 2009, 118 (7), pp.1261-1278. ⟨10.1007/s00122-009-0979-4⟩
Article dans une revue istex hal-02665790 v1

Epigenetic Variation in Tree Evolution: a case study in black poplar (Populus nigra)

Mamadou Dia Sow , Odile Rogier , Isabelle Lesur , Christian Daviaud , Emile Mardoc et al.
Plant Epigenetics (EPIPLANT/SEB 2024), Jul 2024, Clermont-Ferrand, France. , Abstract book of EPIPLANT/SEB 2024, Session VI Chromatin in transcription, replication and repair (Poster #69), pp.131-132
Poster de conférence hal-05056784 v1

Comparative genomic of Mycoplasma feriruminatoris, a mycoides-related pathogen of wild caprinae

Vincent Baby , Chloé Ambroset , Patrice Gaurivaud , Laurent Falquet , Christophe Boury et al.
23. Congress of the International Organization for Mycoplasmology (IOM) (Virtual), Nov 2021, Tel Aviv, Israel
Poster de conférence hal-04694254 v1
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Fast sequence-based microsatellite genotyping development workflow for any non-model species

Olivier Lepais , Emilie Chancerel , Christophe Boury , Franck Salin , Aurélie Manicki et al.
5. Colloque du GDR Génomique environnementales, 2019, La Rochelle, France. 2019
Poster de conférence hal-02791502 v1

Human mitochondrial DNA sequencing by Oxford Nanopore MinION

A. Trimouille , Charlotte Mouden , Christophe Boury , A. Courreges , P. Fergelot et al.
51. Conference of the European-Society-of-Human-Genetics (ESHG) in conjunction with European Meeting on Psychosocial Aspects of Genetics (EMPAG), Jun 2018, Milan, Italy. Nature Publishing Group, European Journal of Human Genetics, 27 (Supplement), 688 p., 2019
Poster de conférence hal-02736180 v1
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Accuracy of genomic prediction in a multi-generation population of maritime pine

Jérôme Bartholomé , Fikret Isik , Joost van Heerwaarden , Annie A. Raffin , Christophe C. Boury et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741597 v1
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Genomic prediction in a multi-generation breeding population: maritime pine as a case study

Jérôme Bartholomé , Christophe C. Boury , Joost van Heerwaarden , Fikret Isik , Christophe Plomion et al.
IUFRO Tree Biotechnology Conference 2011: From Genomes to Integration and Delivery, Jun 2015, Florence, Italy. 2015, ⟨10.15454/1.5137759036095466E12⟩
Poster de conférence hal-02798013 v1

Genotyping By Sequencing development for Salmo salar: A simulation-based predictive approach using the R package SimRAD.

Olivier Lepais , Franck F. Salin , Christophe C. Boury , Erwan Guichoux , Yec'Han Laizet et al.
2. International Conference on Integrative Salmonid Biology, Jun 2014, Vancouver, Canada. , 2014
Poster de conférence hal-02799311 v1

Exploring phenotypic and molecular plasticity to osmotic stress in a Mediterranean pine

Philippe Chaumeil , Christophe C. Boury , Manon M. Moreau , Marie Foulongne , José Carlos Rodrigues et al.
15. International conference of the Plant and Animal Genome, Jan 2007, San Diego, France. , 1 p., 2007
Poster de conférence hal-02824650 v1
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A DNA-capture approach for detection and genome-wide sequencing of Flavescence dorée phytoplasma

Pascal Salar , Christophe Boury , Zoé Delporte , Erwan Guichoux , Blanchandin Emilie et al.
6th European Bois Noir workshop and 1st International Pro-AECOGY conference, UMR-1332 Fruit Biology and Pathology, University of Bordeaux and INRAE, May 2024, Bordeaux (France), France. pp.96-97
Communication dans un congrès hal-04650406 v1

Whole platelet transcriptome profiling confirms a cytoskeleton remodeling in platelet components associated with adverse transfusion reactions

D. Awounou , C. Barlier , C. Aloui , J. Fagan , F. Salin et al.
52. Conference of the European-Society-of-Human-Genetics (ESHG), Jun 2019, Gothenburg, Sweden. pp.1
Communication dans un congrès hal-02737367 v1
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Génotypage de microsatellites par séquençage : aspects méthodologiques et analytiques

Olivier Lepais , Christophe Boury , Emilie Chancerel , Aurélie Manicki , Franck Salin et al.
Réunion du réseau de génétique du Département EFPA, May 2018, Avignon, France
Communication dans un congrès hal-02791698 v1

Développement rapide de marqueurs SNP pour l’aide à la gestion de la truite commune (Salmo trutta L.) dans le bassin de l’Adour

Charlotte Urien , Joëlle Chat , Aurélie Manicki , Christophe Boury , Franck Salin et al.
38. Réunion Annuelle du Groupe d'Etude de Biologie et Génétique des Populations, Jun 2017, Paris Saclay, France
Communication dans un congrès hal-01603236 v1

A comprehensive evaluation of SNP markers for the conservation and genetic monitoring of the critically andangered European sturgeon

Séverine Roques , Emilie Chancerel , Christophe C. Boury , Eric Rochard , Marie-Laure Acolas
ISS8 8th International Symposium on Sturgeons, Sep 2017, Vienna, Austria. pp.1
Communication dans un congrès hal-02607395 v1
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Use of molecular markers to enhance genetic gains in the maritime pine breeding program

Laurent Bouffier , Marjorie Vidal , Jérôme Bartholomé , Christophe C. Boury , Annie A. Raffin et al.
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741050 v1
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Paternity recovery in a maritime pine polycross trial and consequences for breeding

Marjorie Vidal , Luc Harvengt , Christophe C. Boury , Laurent Bouffier
Meeting of IUFRO, Jun 2015, Florence, Italy
Communication dans un congrès hal-02799542 v1
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Integration of molecular tools into the maritime pine breeding program in France

Jérôme Bartholomé , Marjorie Vidal , Annie Raffin , Isabelle Lesur Kupin Lesur , Christophe C. Boury et al.
ProCoGen Dissemination Workshop "from our labs to yours forest", Dec 2015, Orléans, France. 75 p
Communication dans un congrès hal-02738881 v1
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Can genomics simplify current breeding without the cost of a genome-wide approach?

Laurent Bouffier , Marjorie Vidal , Jérôme Bartholomé , Christophe C. Boury , Christophe Plomion
ProCoGen Dissemination Workshop "from our labs to yours forest", Dec 2015, Orléans, France. 75 p
Communication dans un congrès hal-02743400 v1

Simulation pour la prévision du nombre de locus ciblés par les approches de Génotypage par Séquençage

Olivier Lepais , Franck F. Salin , Christophe C. Boury , Erwan Guichoux , Yec'Han Laizet et al.
Réunion du réseau de génétique du Département EFPA, Nov 2014, Nancy, France
Communication dans un congrès hal-02799259 v1
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The genetics of water‐use efficiency in maritime pine and its relation to growth

Elisa E. Marguerit , Laurent Bouffier , Emilie E. Chancerel , Christophe C. Boury , P. Costa et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology: New synergies to tackle the impact of climate change in the 21st century", Oct 2012, Helsinki, Finland. 69 p
Communication dans un congrès hal-02749305 v1
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Genetic association for growth and biomass in maritime pine

J.A. Cabezas , S.C. González‐martínez , C. Collada , Camille Lepoittevin , Christophe C. Boury et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p
Communication dans un congrès hal-02748063 v1

Phenotypic variability among wild Vitis species: a tool to study some mechanisms underlying berry development and composition

Nathalie Ollat , Stephane Decroocq , Louis Bordenave , Ghislaine Hilbert , Cyril Hevin et al.
2. Rencontres Annuelles de l'ISVV, Institut des Sciences de la Vigne et du Vin (ISVV). FRA., Jul 2010, Villenave d'Ornon, France
Communication dans un congrès hal-02817846 v1

Candidate gene mapping in pedunculate oak (Quercus robur L.)

Emilie E. Chancerel , Christophe C. Boury , Florian Alberto , Jérôme J. Durand , Antoine Kremer et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02752968 v1

Cartographie génétique et localisation des QTLs pour le caractère de vigueur propre et conférée chez le porte-greffe de la vigne

Stephane Decroocq , Christophe Boury , Aurélie Manicki , Martine Donnart , Louis Bordenave et al.
7. Symposium International d'Oenologie, Jun 2003, Bordeaux, France
Communication dans un congrès hal-02758766 v1